View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4141_low_3 (Length: 457)
Name: NF4141_low_3
Description: NF4141
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4141_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 1 - 449
Target Start/End: Original strand, 10070606 - 10071063
Alignment:
| Q |
1 |
tatggttgttgtagagaaataataaggaaggagaaaatatcaattgcatggaaaaagagataatatttctatattttaagatatatgataattt------ |
94 |
Q |
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| T |
10070606 |
tatggttgttgtagagaaataataaggaaggagaaaatatcaattgcatggaaaaagagataatatttctatattttaagatatataataatttcaaatg |
10070705 |
T |
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| Q |
95 |
--tggtaaacacaacttagttaatacctataaaaatgttaatatgcaaacgtcggagttcgaatataannnnnnnnnnnnnnnnnnnnnnnngagtatcc |
192 |
Q |
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| T |
10070706 |
tttggtaaacacaacttagttaataactataaaaatgttaatatgcaaacgtcggagttcgaatataattttttcatttcatttttctttttgagtatcc |
10070805 |
T |
|
| Q |
193 |
aataaaagaaatgattttgtaaaattcaagttttaatatctactttaataaatgaaaactatacaactaatttgcttaatttaaaaaataaatattttat |
292 |
Q |
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| T |
10070806 |
aataaaagaaatgattttgtaaaattcaagttttaatatctactttaataaatgaaaactatacaactaatttgcttaatttaaaaaataaatattttat |
10070905 |
T |
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| Q |
293 |
tttatttcttttacatacaatctcatccgaagtaatattttgtacaatcttaatggataataacaaagtaattttcatgtattatc-aatatcatttcca |
391 |
Q |
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| T |
10070906 |
tttatttcttttacataaaatctcatccgaagtaatattttgtacaatcttaatggataataacaaagtaattttcatgtattatcaaatatcatttcca |
10071005 |
T |
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| Q |
392 |
tcaatgatatgaatttaaaaggaatattctggcttccacatcatattttgtctctgct |
449 |
Q |
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| T |
10071006 |
tcaatgatatgaatttaaaaggaatattctggcttccacatcatattttgtctctgct |
10071063 |
T |
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