View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4142_high_22 (Length: 280)
Name: NF4142_high_22
Description: NF4142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4142_high_22 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 7336794 - 7337046
Alignment:
| Q |
7 |
tcgaagaatatagatcaatgcaaaagcttggttagtgtatcttaattatcaaggaattaatgtaataggcaaattaatttgtgtaacttgatttgtatta |
106 |
Q |
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| T |
7336794 |
tcgaagaaaatagatcaatgcaaaagcttggttagtgtatcttaattatcaaggaat----gtaataggcaaattaatttgtgtaacttgatttgtatta |
7336889 |
T |
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| Q |
107 |
tatgaatggtgtatagaaatttgatttaaaatctagaatttatggtttgtatatcaaatcatatggtaaattaagttgtttgtcaaattacaaattcgga |
206 |
Q |
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| T |
7336890 |
tatgaatggtgtatagaaatttgatttaaaatctagaatttatggtttgtatatcaaatcatatggtaatttaagttgtttgtcaaattacaaattcgga |
7336989 |
T |
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| Q |
207 |
ttctttcaaacgaatccaacataaactcaaactcatatcatttgtgtccaaccttttg |
264 |
Q |
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| T |
7336990 |
ttctttcaaacg-atccaaaataaactgaaactcatatcatttgagtccaaccttttg |
7337046 |
T |
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