View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4142_high_40 (Length: 237)
Name: NF4142_high_40
Description: NF4142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4142_high_40 |
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Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 48254982 - 48255201
Alignment:
| Q |
1 |
tctgagcaacaattaaaagaaaatagtatgttaatatattaacgaaggaaattaaaaggactaaacttagatgcagtagcagacgtaattttcgaaccat |
100 |
Q |
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| T |
48254982 |
tctgagcaacaattaaaagaaattagtatgttaatatattaacgaaggaaattaaaagga-taaacttagatgcagtaccagacgtaattttcaaaccat |
48255080 |
T |
|
| Q |
101 |
tttaaaattgttagtgccagttataagagtagaaagtttgtgcattatgtaccttgttgatcagcttctttaactttggttgcaaattgtttcatttggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48255081 |
tttaaaattgttagtgccagttataagagtagaaagtttgtgcattatgtaccttgttgatcagcttctttaactttggttgcaaattgtttcatttggg |
48255180 |
T |
|
| Q |
201 |
tgagctgaatagcaagggaga |
221 |
Q |
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||||||||||||||||||||| |
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| T |
48255181 |
tgagctgaatagcaagggaga |
48255201 |
T |
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