View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4142_low_20 (Length: 287)
Name: NF4142_low_20
Description: NF4142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4142_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 18 - 275
Target Start/End: Complemental strand, 5229265 - 5229008
Alignment:
| Q |
18 |
caaacgtgtcaaattattactggttttgcaatgaactataatcatgtaaaataattaaatgtgttttatgaaatgtatggagaaacggtgagaaaagtga |
117 |
Q |
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| T |
5229265 |
caaacgtgtcaaattattactggttttgcaatgaactataatcatgtaaaataattaaatgtgttttatgaaatgtatggagaaacggtgagaaaagtga |
5229166 |
T |
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| Q |
118 |
agtaaagctataccttagttaggttaggcattgcattcacttggttcaaacttcggaattattagaaggagtaagaaatgaatttatggatcaatatatg |
217 |
Q |
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| T |
5229165 |
agtaaagctataccttagttaggttaggcattgcattcacttggttcaaacttcggaattattagaaggggtaagaaatgaatttatggatcaatatatg |
5229066 |
T |
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| Q |
218 |
gtagtttctttgtgtttcacaatatgtggtaataattgggttctgttcttttacattc |
275 |
Q |
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| T |
5229065 |
gtagtttctttgtgtttcacaatatgtggtaataattgggttctgttcttttacattc |
5229008 |
T |
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