View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4145_high_3 (Length: 227)
Name: NF4145_high_3
Description: NF4145
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4145_high_3 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 5 - 227
Target Start/End: Original strand, 1444584 - 1444806
Alignment:
| Q |
5 |
caaaactcagctgaatttgttctctctttcatcgctgcttccatgattggcgcggtcgcaaccaccgccaatcctttctacaccagcgctgaaatcttca |
104 |
Q |
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| T |
1444584 |
caaaactcagctgaatttgttctctctttcatcgctgcttccatgattggtgcggtcgcaaccaccgccaatcctttctacaccagcgctgaaatcttca |
1444683 |
T |
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| Q |
105 |
aacaaataaaagcttctgaaacaaaactcattattacacaagcaatgtacgttgataaactccgtcaaaaggatcaggttggtgcagaatttgactttaa |
204 |
Q |
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| T |
1444684 |
aacaaataaaagcttctgaaacaaaactcattattacacaagcaatgtacgttgataaactccgtcaaaaggatcaggttggtgcagaatttgactttaa |
1444783 |
T |
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| Q |
205 |
ggtgataacaaccgacgaaccac |
227 |
Q |
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||||||||||||||||||||||| |
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| T |
1444784 |
ggtgataacaaccgacgaaccac |
1444806 |
T |
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