View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4147_high_18 (Length: 293)
Name: NF4147_high_18
Description: NF4147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4147_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 1 - 288
Target Start/End: Original strand, 30343498 - 30343785
Alignment:
| Q |
1 |
tcaagatgcaaaggtggaatttcagattggttaagtttgtataatctagacttttgatcctcaagcatatgaagaaactctcttgtaacattttcttcat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30343498 |
tcaagatgcaaaggtggaatttcagattggttaagtttgtataatctagacttttgatcctcaagcatatgaagaaactctcttgtaacattttcttcat |
30343597 |
T |
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| Q |
101 |
cagaatccaatctttgtgattccgtgtcaaaatctttgctttgttctcccatcatggattcaagagcctttatctgcttagaaagtgaatcaagctcatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30343598 |
cagaatccaatctttgtgattccgtgtcaaaatctttgctttgttctcccatcatggattcaagagcctttatctgcttagaaagtgaatcaagctcatt |
30343697 |
T |
|
| Q |
201 |
taatcttgttaagtgcaattgatcatggactatttccttgacaatttcacttgatgctgatttcaattctatagatttctctgctcct |
288 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |
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| T |
30343698 |
taatcttgttaagtgcaattgatcatggactatttccttgacaatttcacttgatgctgatttcacttctatagatttctctgatcct |
30343785 |
T |
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