View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4148_high_22 (Length: 250)
Name: NF4148_high_22
Description: NF4148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4148_high_22 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 158; Significance: 3e-84; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 89 - 250
Target Start/End: Complemental strand, 37160831 - 37160670
Alignment:
| Q |
89 |
cactagtcttgttttagaagtctatcattttctaaaccaaagtatatttgaaagtgtttcaactagacatataatgaattcaactacatacctttccagt |
188 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
37160831 |
cactagtcttgttttagaagtctatcattttctaaaccaaagtatatttgaaagtgtttcaactagacatataatgagttcaactacatacctttccagt |
37160732 |
T |
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| Q |
189 |
gatcttactgtacatctgaaccacatctttcactgtggtttcaaagtgtgttgtgggatcat |
250 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37160731 |
gatcttactgtacatctgaaccacatctttcactgtggtttcaaagtgtgttgtgggatcat |
37160670 |
T |
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