View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4148_high_26 (Length: 242)
Name: NF4148_high_26
Description: NF4148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4148_high_26 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 45166140 - 45165915
Alignment:
| Q |
17 |
attaagaagtactagcatttaacactcagcattaaaacatgtgattacagtacttctattcaatgaacctgatataaatgcttcaaatccattgtatttt |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45166140 |
attaagaagtactagcatttaacactcagcattaaaacatgtgattacagtacttctattcaatgaacctgatataaatgcttcaaatccattgtatttt |
45166041 |
T |
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| Q |
117 |
ggataacaggatctagaatacttggaagctttgatctgtcggttagctgaggcatggcctacatattgaatttgaaagtcttaaaccataaagtacagca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45166040 |
ggataacaggatctagaatacttggaagctttgatctgtcggttagctgaggcatggcctacatattgaatttgaaagtcttaaaccataaagtacagca |
45165941 |
T |
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| Q |
217 |
aaacttaaattttcatccattttctc |
242 |
Q |
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|||||||||||||||||||| ||||| |
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| T |
45165940 |
aaacttaaattttcatccatattctc |
45165915 |
T |
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