View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4148_low_15 (Length: 340)
Name: NF4148_low_15
Description: NF4148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4148_low_15 |
 | |
|
| [»] scaffold0879 (1 HSPs) |
| | |
|
| [»] scaffold0565 (1 HSPs) |
| | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0564 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 266; Significance: 1e-148; HSPs: 14)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 333
Target Start/End: Complemental strand, 7956551 - 7956226
Alignment:
| Q |
8 |
ttattttgacacttttgatctacaacaagtacacgtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgac |
107 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||| |
|
|
| T |
7956551 |
ttattttgacacttttgatctacgacaagtacacgtaggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaaaaatattcgac |
7956452 |
T |
|
| Q |
108 |
cttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaac |
207 |
Q |
| |
|
||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
7956451 |
cttgctttgtttggtttgaaaccgattcgaaccaatcgaaaccgatctagtttggtttggttcatggtttttcattttgagatatgtgaaaccgatgaac |
7956352 |
T |
|
| Q |
208 |
caatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattc |
307 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
7956351 |
caatccgatgataaccatactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaatac |
7956252 |
T |
|
| Q |
308 |
attcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||| ||||||||||| ||||||||| |
|
|
| T |
7956251 |
attctctttctctcatattcatctca |
7956226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 43 - 330
Target Start/End: Complemental strand, 44223503 - 44223215
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| || |||| ||||||| |||| |||||||| ||||||| |
|
|
| T |
44223503 |
taggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaaaaatatatgatcttgtttggttcagtttaaaaccgatctgaaccaa |
44223404 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
44223403 |
tcgaaaccaatctagtttggtttggttcatgatttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttacaaa |
44223304 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaata-ttttttaattcattcactttctctcatcttcatc |
330 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
44223303 |
tattatcctacctcacacaaacttatggttaggcccaaaattaaacataaaatacttttttaatccattcactttctctcatcttcatc |
44223215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 43 - 301
Target Start/End: Complemental strand, 17722596 - 17722330
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
||||||||||| ||||||| | ||||||||||||| ||||||||||||||| |||||||||| |||||| |||||||||||||||||| || ||||| || |
|
|
| T |
17722596 |
taggggtgtaaatggttcggataaaaccaatgaaaccgaaagtccaaaccggaaaaatatccaaccttgtttggttcggtttgaaaccaatccgaactaa |
17722497 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
17722496 |
tcgaaaccgatctagtttggtttggttcatgatttttcatttcgagatctgtgaaaccgatgaaccaatccgatgataaccacactcattactttactaa |
17722397 |
T |
|
| Q |
243 |
tatta--------tcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttt |
301 |
Q |
| |
|
||||| |||||||||||||| ||| ||||||| |||||||||||||||||||||| |||| |
|
|
| T |
17722396 |
tattatcataaattcctacctcacacatactcatggttaggcccaaaattaaacataaaataatttt |
17722330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 42 - 305
Target Start/End: Original strand, 35948826 - 35949097
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccg |
131 |
Q |
| |
|
||||||||||||||| |||| |||||||||| |||| |||||||||||| ||| |||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
35948826 |
gtaggggtgtaagtgtttcggacaaaaccaacgaaaacgaaagtccaaattgaaccaaaacaaaaaaatatccgactttgtttggttcggtttgaaaccg |
35948925 |
T |
|
| Q |
132 |
attcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcct |
231 |
Q |
| |
|
|| |||| || || ||| ||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
35948926 |
atccgaatcattcaaaatcgatctagtttggtttgattcatggtttttcatttcgagatccatgaaaccgatgaaccaatccgatgataacaacattcct |
35949025 |
T |
|
| Q |
232 |
tattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaat |
305 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
35949026 |
tattttactaatattatcctacct--cacaaacttatggttaggcccaaaattaaacataaaatactttttaat |
35949097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 43 - 250
Target Start/End: Complemental strand, 3767832 - 3767625
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
|||| |||||||||||||| |||||||| |||||| ||||| |||||||||||||| |||||||||||| || |||||||| ||||||| |||||||| |
|
|
| T |
3767832 |
taggagtgtaagtggttcggacaaaaccgatgaaaccgaaaatccaaaccgaaaaagtatccgaccttgtttagttcggttcaaaaccgaaccgaaccaa |
3767733 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|| ||||||||||| ||||||||||||| ||||||| |||| ||||||| |||||||||||| | |||||| ||||| |||||| |||||| ||| |
|
|
| T |
3767732 |
tctaaaccgatctagtttggtttggttctcggttttttattttgagatccaatgaaccgatgaaccgaaccgatgctaacctcactccccattttagtaa |
3767633 |
T |
|
| Q |
243 |
tattatcc |
250 |
Q |
| |
|
|||||||| |
|
|
| T |
3767632 |
tattatcc |
3767625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 333
Target Start/End: Original strand, 9040426 - 9040718
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaacca |
141 |
Q |
| |
|
|||||||| |||| |||||| | |||||| |||||||||||||||||||||||||| ||||||||||||| | | | |||| ||||||| |||| |
|
|
| T |
9040426 |
gtaggggtataagcggttcggataaaaccgatgaaatcgaaagtccaaaccgaaaatgtatccgaccttgccttgataggttcaaaaccga-----acca |
9040520 |
T |
|
| Q |
142 |
atcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttacta |
241 |
Q |
| |
|
||| |||||||||| ||||||||||||| |||||||||||| |||||| |||||||||||||| | |||| ||||| |||| | ||||||||| |
|
|
| T |
9040521 |
atctaaaccgatcttgtttggtttggttctcggtttttcattttgagatctaagaaaccgatgaaccgagttgatgctaaccccacttcccattttacta |
9040620 |
T |
|
| Q |
242 |
atattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||||||| ||||||||| ||||||| ||| || |||||||| || |||||||| | ||||||||||||||||||| ||| |||||||| |
|
|
| T |
9040621 |
ttattatccctcctcacacacacttatgattaggctcaaaattaaagctcaagataaaatactacttaattcattcactttctcccattatcatctca |
9040718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 43 - 287
Target Start/End: Complemental strand, 25456308 - 25456064
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
|||||||||||| ||||| |||||| |||||||| ||| ||||||||| ||| |||||||||||| |||||| ||| ||||||| |||| ||| |
|
|
| T |
25456308 |
taggggtgtaagaagttcggacaaaatcaatgaaactaaaattccaaaccggaaatgtatccgaccttgtctggttcagttcaaaaccgaaccgaatcaa |
25456209 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|| ||||| |||| |||||||||||| |||||||||||| ||||||| ||||||||||| | | | |||| ||||| |||||| ||||||||| |
|
|
| T |
25456208 |
tctaaaccaatcttgtttggtttggttatcggtttttcattttgagatccaataaaccgatgaatcgaactgatgctaacctcactccccattttactat |
25456109 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|||||||| | ||||||| ||||||| |||||||||||||||| |
|
|
| T |
25456108 |
tattatccctcttcacacacacttatgagtatgcccaaaattaaa |
25456064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 47 - 193
Target Start/End: Complemental strand, 34760979 - 34760832
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaa-tatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcg |
145 |
Q |
| |
|
|||||||| |||||| |||||||| |||||| ||||| ||||||||||||||| |||| || |||| ||||||||||| ||| ||| |||||||| | |
|
|
| T |
34760979 |
ggtgtaagcggttcgaacaaaaccgatgaaaccgaaaatccaaaccgaaaaaagtatctgatcttgtttggttcggttcaaaatcgaaccgaaccaacct |
34760880 |
T |
|
| Q |
146 |
aaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| |||| |||||||| |
|
|
| T |
34760879 |
aaaccgatctagtttggtttggttcttggtttttgattttgagatccg |
34760832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 136 - 287
Target Start/End: Complemental strand, 25808368 - 25808217
Alignment:
| Q |
136 |
gaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttatt |
235 |
Q |
| |
|
||||||||| |||||||||| |||||||||| ||| |||||||||||| ||||||| |||| ||||||| | | |||||| ||||| ||||||| ||| |
|
|
| T |
25808368 |
gaaccaatctaaaccgatcttttttggtttgattctcggtttttcattttgagatccaagaaatcgatgaatcgaaccgatgctaacctcactcctcatt |
25808269 |
T |
|
| Q |
236 |
ttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
||| || |||||||| | ||||||| ||||||| |||||| ||||||||| |
|
|
| T |
25808268 |
ttaatattattatccctcttcacacacacttatgagtatgcctaaaattaaa |
25808217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 261
Target Start/End: Original strand, 9505077 - 9505244
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||||||||| |||||| |||||||| || ||| ||| |||||||| | |||||||| || ||||||| ||||| || |||| |||| || |||| |
|
|
| T |
9505077 |
aaaaaatatccaaccttgtttggttcgattcaaaatcgaaccgaaccaaccaaaaccgatatagtttggttcggttctaggattttaattttgaaatcca |
9505176 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacaca |
261 |
Q |
| |
|
|||||||| |||| | |||||| |||| |||||| |||||| |||||||||||| ||||||||| |
|
|
| T |
9505177 |
acaaaccgataaaccgaaccgatgccaacctcactccccattttagtaatattatccttcctcacaca |
9505244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 16570987 - 16570794
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||||||||| |||||| |||||| |||| ||||||| | |||||| | ||||||||||| ||||||| ||||| | ||||| |||| ||||||| |
|
|
| T |
16570987 |
aaaaaatatccaaccttgtttggtttggttcaaaaccgaaccaaaccaacctaaaccgatctaatttggttaggttctcgatttttaattttgagatcca |
16570888 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
||||||||||| | |||||| |||| |||||| |||||| || |||||||| ||||||||| | ||||| ||| | |||||||||| |
|
|
| T |
16570887 |
aagaaccgatgaactgaaccgatgctaacttcactccccattttagtattattatccctcctcacacacatttatgattaaactcaaaattaaa |
16570794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 20860500 - 20860427
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcg |
120 |
Q |
| |
|
||||||||||||||| |||||||| |||||| ||||| | ||||| |||||| |||| ||||||| |||||||| |
|
|
| T |
20860500 |
ggtgtaagtggttcgaacaaaaccgatgaaaccgaaaattcaaactgaaaaattatctgaccttgtttggttcg |
20860427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 269
Target Start/End: Original strand, 32321853 - 32322035
Alignment:
| Q |
87 |
caaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcg |
186 |
Q |
| |
|
|||||||||||| ||| |||||||| |||||||||||| ||| | | |||| ||| ||||||||||| ||||||| ||||| ||||||| |||| |
|
|
| T |
32321853 |
caaaccgaaaaagtattcgaccttgtttggttcggtttaaaaacaaaccgaatcaacataaaccgatctaatttggttcggttctcggtttttaatttta |
32321952 |
T |
|
| Q |
187 |
agatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatg |
269 |
Q |
| |
|
|||| | ||||||| |||||| || ||| ||||| ||||| |||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
32321953 |
agattcaatgaaccgataaaccaaaccaatgctaacctcactctccattttagtaatattatctctcctcacacacacttatg |
32322035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 250
Target Start/End: Complemental strand, 25344177 - 25344101
Alignment:
| Q |
174 |
gtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcc |
250 |
Q |
| |
|
||||||||||| ||||| | ||||| |||||| | | |||||| ||||| ||||||| ||||||||| |||||||| |
|
|
| T |
25344177 |
gtttttcattttgagattcaagaaacagatgaatctaaccgatgctaacctcactcctcattttactactattatcc |
25344101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 199; Significance: 1e-108; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 42 - 333
Target Start/End: Complemental strand, 16585051 - 16584750
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccg |
131 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| ||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
16585051 |
gtaggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaccaaaacgaaaaaatatccaaccttgtttggttcggtttgaaaccg |
16584952 |
T |
|
| Q |
132 |
attcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcct |
231 |
Q |
| |
|
|| |||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
16584951 |
atccgaaccaatcgataccgatctagtttggtttggttcatggttttttatttcgagatccgtgaaaccgatgaaccaatctgatgataaccaaactcct |
16584852 |
T |
|
| Q |
232 |
tattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
16584851 |
tattttactaatattatcatacctcacacaaacttatggttagacccaaaattaaacataaaatactttttaatccattcactttctctaatcttcatct |
16584752 |
T |
|
| Q |
332 |
ca |
333 |
Q |
| |
|
|| |
|
|
| T |
16584751 |
ca |
16584750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 86 - 325
Target Start/End: Complemental strand, 1161565 - 1161327
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||| || | | |||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
1161565 |
ccaaaccgaaaaa-tatccgaccttatttggttcggtttgaaaccaatccaagccaatcgaaaccgatctagtttggtttggttcatggtttttcatttc |
1161467 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1161466 |
gatatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttcagcccaaaatta |
1161367 |
T |
|
| Q |
286 |
aacataaaatattttttaattcattcactttctctcatct |
325 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
1161366 |
aacataaaatattttttaatccattcactttctcttatct |
1161327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 47 - 333
Target Start/End: Original strand, 8083990 - 8084290
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaac----------cgaaaa-aatatccgaccttgcttggttcggtttgaaaccgattc |
135 |
Q |
| |
|
||||||||||||||| ||| |||||| |||||||||||||||||| |||||| |||||||||||||| |||||| ||||||||||| || | |
|
|
| T |
8083990 |
ggtgtaagtggttcggacataaccaacgaaatcgaaagtccaaactaaatcaaaccgaaaaaaatatccgaccttgtttggtttggtttgaaaccaatcc |
8084089 |
T |
|
| Q |
136 |
gaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttatt |
235 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||| |
|
|
| T |
8084090 |
gaaccaatcgaaaccgatctagtttggtttggttcatggtttttcatttcaagatccgtgaaactgatgaatcaatccgatgataaccacactccttatt |
8084189 |
T |
|
| Q |
236 |
ttactaat---attatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatcttcatctc |
332 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
8084190 |
ttactaatccatttatcctacctcacacaaactcatggttaggcacaaaattaaacataaaataatttttaatctattcactttctctcatcttcatctc |
8084289 |
T |
|
| Q |
333 |
a |
333 |
Q |
| |
|
| |
|
|
| T |
8084290 |
a |
8084290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 42 - 333
Target Start/End: Original strand, 11619933 - 11620216
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaacca |
141 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| ||||| ||| ||||||||||||| |||| ||||||| ||||||||||||| | ||| | |
|
|
| T |
11619933 |
gtaggggtgtaagtggttcggacaaaaccaacgaaaccgaaa------accaaaaaaatatccgatcttgtttggttcagtttgaaaccgatccaaacta |
11620026 |
T |
|
| Q |
142 |
atcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttacta |
241 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
11620027 |
atcgaaaccgatctagtttggtttggttcatggtttttcattttgagatctgtgaaaccgatgaaccaatccgatgatactcacactacttattttacta |
11620126 |
T |
|
| Q |
242 |
atattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||||| |
|
|
| T |
11620127 |
atattatcctacct--cacaaacttatggttaaacccaaaattaaacatgaaatactttttaatcaattcactttctcccatcttcatctca |
11620216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 45 - 244
Target Start/End: Original strand, 25785763 - 25785962
Alignment:
| Q |
45 |
ggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatc |
144 |
Q |
| |
|
||||||||||||||||| |||||||||| |||| |||| | ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
25785763 |
ggggtgtaagtggttcggacaaaaccaacgaaactgaaatttcaaaccgaaaaaatatccgaccttgtttggttcggtttgaaaccgatccgaaccaatc |
25785862 |
T |
|
| Q |
145 |
gaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaata |
244 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |
|
|
| T |
25785863 |
gaaaccgatatagtttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacattctttattttactaata |
25785962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 45 - 286
Target Start/End: Original strand, 18461120 - 18461362
Alignment:
| Q |
45 |
ggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaa-aaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaat |
143 |
Q |
| |
|
|||||||||||||||| |||||||||| |||| | |||||||||||| || ||||||||||||||| || ||||||||| ||| |||| | |||||| |
|
|
| T |
18461120 |
ggggtgtaagtggttcaaacaaaaccaacgaaaccaaaagtccaaaccaaaccaaatatccgaccttgtttagttcggtttcaaatcgatctggaccaat |
18461219 |
T |
|
| Q |
144 |
cgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaat |
243 |
Q |
| |
|
| |||||||| || |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| |
|
|
| T |
18461220 |
caaaaccgatttagtttggtttggttcatgattttttatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcattaatttattaat |
18461319 |
T |
|
| Q |
244 |
attatcctacctcacacaaacttatggttatgcccaaaattaa |
286 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |||||||||||| |
|
|
| T |
18461320 |
attatccaacctcgcacaaacttatggttaagcccaaaattaa |
18461362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 86 - 323
Target Start/End: Complemental strand, 42010102 - 42009880
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| |||||||||||| ||| ||||| |||||||||||||||| |
|
|
| T |
42010102 |
ccaaaccgaaaaaatatccgacattgtttggttcggtttgaaaccgatccaaaccaattgaaaccgatctagtttagtttgactcatggtttttcatttt |
42010003 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||| |
|
|
| T |
42010002 |
gagat---------------------ccgatgataaccacactccttatattactaatagtatcctacctcacacaaacttatggttaggcctaaaatta |
42009924 |
T |
|
| Q |
286 |
-----aacataaaata-ttttttaattcattcactttctctcat |
323 |
Q |
| |
|
||||||||||| |||||| || |||||| |||||||||| |
|
|
| T |
42009923 |
aagtcaacataaaatactttttttatccattcattttctctcat |
42009880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 94 - 287
Target Start/End: Original strand, 11911646 - 11911839
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||| |||||||||||| ||||||||||| ||||||| |||||||| | ||||||||||| |||| ||| |||| |||||||| |||| || ||||| |
|
|
| T |
11911646 |
aaaaagtatccgaccttgtttggttcggttcaaaaccgaaccgaaccaacctaaaccgatctagtttgatttagttcttggtttttaattttgaaatccg |
11911745 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|||||||||||||| ||||| ||| | |||||| |||| | ||||||||||| | |||| || ||||||| ||| || |||||||||| |
|
|
| T |
11911746 |
atgaaccgatgaaccaaaccgatactaaactcactccccatttgagtaatattatccctcatcacgcacacttatgattaagctcaaaattaaa |
11911839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 236 - 315
Target Start/End: Original strand, 25787286 - 25787365
Alignment:
| Q |
236 |
ttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactt |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||| |||||||| ||| ||||| |
|
|
| T |
25787286 |
ttactaatattatcctacctcacacaaacttattgttagacccaaaattaaacattaaataatttttaatccatgcactt |
25787365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 95
Target Start/End: Complemental strand, 32678602 - 32678554
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa |
95 |
Q |
| |
|
||||||||||||||| |||||||| |||||||||||| | ||||||||| |
|
|
| T |
32678602 |
ggtgtaagtggttcgaacaaaaccgatgaaatcgaaaattcaaaccgaa |
32678554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 118
Target Start/End: Original strand, 4919491 - 4919566
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggtt |
118 |
Q |
| |
|
|||||||||||||||| | |||||||| | |||| ||||||| ||||||||||| |||| |||||||| ||||| |
|
|
| T |
4919491 |
taggggtgtaagtggtagggacaaaaccgacgaaaccgaaagttcaaaccgaaaaggtatctgaccttgcctggtt |
4919566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 33857601 - 33857634
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaa |
76 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
33857601 |
taggggtgtaagtggttcggacaaaaccaatgaa |
33857634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Complemental strand, 33923322 - 33923289
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaa |
76 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| |
|
|
| T |
33923322 |
taggggtgtaagtggttcggacaaaaccaatgaa |
33923289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 12)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 86 - 333
Target Start/End: Original strand, 31111466 - 31111713
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
31111466 |
ccaaaccgaaaaaatatccgaccttgtttggttcggtttgaaactgatctgaaccaattgaaaccgatctagtttggtttggttcatggtttttcatttt |
31111565 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||||| |||||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| || |||||||| |
|
|
| T |
31111566 |
gagatccttgaaaccgataaaccaatctggtgataaccacacttcttattttactaatattatcctacctcacacaaaattatggttaggcgcaaaatta |
31111665 |
T |
|
| Q |
286 |
aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
31111666 |
aatataaaatactttttaattcattcactttctctcatcttcatctca |
31111713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 45 - 325
Target Start/End: Complemental strand, 13852453 - 13852163
Alignment:
| Q |
45 |
ggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccgatt |
134 |
Q |
| |
|
||||||||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||| ||| ||| ||| ||||||||||||||||| |
|
|
| T |
13852453 |
ggggtgtaagtagttcggacaaaaccaacgaaatcgaaagtccaaattgaatcaaatcaaaaaaatatctgactttgtttgattcggtttgaaaccgatc |
13852354 |
T |
|
| Q |
135 |
cgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttat |
234 |
Q |
| |
|
| |||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
13852353 |
caaaccaatcaaaaccgatctagtttggtttggttcatagtttttcattttgagatccgtgaaaccgatgaaccaatctgttgataaccacactccttat |
13852254 |
T |
|
| Q |
235 |
tttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatct |
325 |
Q |
| |
|
|||| |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13852253 |
tttattaatattatcttacctcacacaaacttaaggttatgaccaaaattaaacataaaatattttttaatccattcactttctctcatct |
13852163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 47 - 287
Target Start/End: Original strand, 4638168 - 4638417
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcga |
146 |
Q |
| |
|
|||||||| ||||| || ||||||| |||| ||||||||||||||||||||||||||||||||| | |||||||||||||| |||| |||||||||| | |
|
|
| T |
4638168 |
ggtgtaagcggttcagactaaaccaacgaaaccgaaagtccaaaccgaaaaaatatccgaccttgttcggttcggtttgaaatcgatccgaaccaatcaa |
4638267 |
T |
|
| Q |
147 |
aaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcctta----ttttactaa |
242 |
Q |
| |
|
|| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4638268 |
tactgatttagtttggtttggttcatggtttttcattttgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttaattcttttactaa |
4638367 |
T |
|
| Q |
243 |
tattatcctac-----ctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
||||||||| | |||||||||| ||||||||| |||||||||||| |
|
|
| T |
4638368 |
tattatcctcctcacactcacacaaaattatggttagacccaaaattaaa |
4638417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 43 - 328
Target Start/End: Original strand, 36009179 - 36009462
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
||||||| |||| ||||| ||||||| || |||||| |||||||||| |||||||||||||| |||| || |||||||||||||||||| ||| ||| |
|
|
| T |
36009179 |
taggggttcaagtagttcggacaaaactaacgaaatcaaaagtccaaattgaaaaaatatccgatcttgtttagttcggtttgaaaccgatctgaatcaa |
36009278 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
36009279 |
tc----------tagtttggtttggttcatggtttttcatttcgagatccatgaaaccgatgaatcaatccgatgataaccacactccttattttactaa |
36009368 |
T |
|
| Q |
243 |
tattatc--------ctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatcttca |
328 |
Q |
| |
|
||||||| |||||| ||||||| | ||||||| | |||||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
36009369 |
tattatcctacatttctaccttacacaaattcatggttaggtccaaaattaaacataaaataatttttaatccattcactttctctcatcttca |
36009462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 46 - 333
Target Start/End: Original strand, 38606980 - 38607275
Alignment:
| Q |
46 |
gggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcg |
145 |
Q |
| |
|
||||||||| ||||| |||||| ||| |||| | |||||||||||||||| ||||||||||||| ||| |||| || ||||||| |||||||||| |
|
|
| T |
38606980 |
gggtgtaagcggttcagacaaaatcaacgaaactgtaagtccaaaccgaaaatatatccgaccttgtttg-ttcgattcaaaaccgaaccgaaccaatct |
38607078 |
T |
|
| Q |
146 |
aaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatat |
245 |
Q |
| |
|
|||| || || ||||||| ||||| ||||||||||||| ||||||| | ||||||||||||| || |||| ||||||||||| ||||||||||| | |
|
|
| T |
38607079 |
aaactgaccttgtttggttcggttcttggtttttcattttgagatccataaaaccgatgaaccgatttgatgctaaccacactcgccattttactaatgt |
38607178 |
T |
|
| Q |
246 |
tatcctacctcacac----aaacttatggttatgcccaaaatta-----aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||||| |||||||| | ||||||| ||| ||||||||||| ||||||||||| | |||||| |||||| ||| ||||||| |||||||| |
|
|
| T |
38607179 |
tatccctcctcacacgcaaacacttatgattaggcccaaaattaagtccaacataaaatactatttaatccattcattttatctcatcatcatctca |
38607275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 333
Target Start/End: Original strand, 37630343 - 37630634
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
|||||||||||||| |||| |||||||| |||||| |||| ||||||||||||| |||| ||||||||||||| |||| ||| |||| | |||||| |
|
|
| T |
37630343 |
taggggtgtaagtgattcggacaaaaccgatgaaaccgaa---ccaaaccgaaaaagtatcgaaccttgcttggtttggttcaaaatcgatccaaaccaa |
37630439 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
| |||| |||||| ||||||| |||| ||||||| |||| ||||||| ||||| |||||| | |||| |||| |||||| | |||| ||| |
|
|
| T |
37630440 |
cctaaactgatctagtttggttcagttctcggtttttaattttgagatccaatgaaccggtgaaccgaatggatgctaacatcactccccactttagtaa |
37630539 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||||||| |||||||| ||||||| ||| || |||||||| ||||| ||||| || |||||||||||||||||||||||| || ||||| |
|
|
| T |
37630540 |
tattatccctcctcacac--acttatgattaagctcaaaattaaagtccaacatcaaatacttcttaattcattcactttctctcatcatcgtctca |
37630634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 333
Target Start/End: Complemental strand, 29109295 - 29109042
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||| |||||| |||||||||||| ||||||| ||| ||||||| |||| ||| | ||||| ||||| ||||||||||||| ||||||| |||| |
|
|
| T |
29109295 |
ccaaactgaaaaattatccgaccttgtttggttcagttcaaaaccgaaccgaagcaacctaaaccaatctagtttggtttggttctcggtttttaatttt |
29109196 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||||| |||||||||||||| ||||| ||||| || | |||||| ||||||||||| ||||||||| | |||| ||| || |||||||| |
|
|
| T |
29109195 |
gagatccaaagaaccgatgaaccaaatcgatgctaaccttccttcccattttagtaatattatcccccctcacacacaattataattaagctcaaaatta |
29109096 |
T |
|
| Q |
286 |
------aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| ||| |||||||| |
|
|
| T |
29109095 |
aagtccaacataaaatactccttaattcattcactttctcctatcatcatctca |
29109042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 43 - 132
Target Start/End: Original strand, 27866622 - 27866710
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||||||||||||||||| |||||| | || ||| ||||| ||||||||| |||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
27866622 |
taggggtgtaagtggttcggacaaaatcgataaaaccgaaaatccaaaccg-aaaagtatccgaccttgcttggttcggttcaaaaccga |
27866710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 330
Target Start/End: Original strand, 5526270 - 5526519
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||||||||| |||||||||||| || |||||||| |||| || |||||||| | ||||||||||| ||||||| ||||| |||||| |||| |
|
|
| T |
5526270 |
ccaaaccgaaaacgtatccgaccttgttttgttcggttcaaaactga-acgaaccaacctaaaccgatctagtttggttcggttctcagtttttaatttt |
5526368 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||||| ||| |||||||| | |||||| ||| | |||||| |||||| || |||||||| ||| ||||| ||||||| ||| | |||||||| |
|
|
| T |
5526369 |
gagatccaaagaacagatgaaccgaaccgatgctaatctcactccccattttagtattattatccctccttacacacacttatgattaaactcaaaatta |
5526468 |
T |
|
| Q |
286 |
------aacataaaatattttttaattcattcactttctctcatcttcatc |
330 |
Q |
| |
|
||||||||||| | |||||||||||||||||| ||||| ||||| |
|
|
| T |
5526469 |
aagtccaacataaaatactccttaattcattcactttctgtcatcatcatc |
5526519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 191
Target Start/End: Complemental strand, 3919987 - 3919883
Alignment:
| Q |
87 |
caaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcg |
186 |
Q |
| |
|
|||||||||||| || |||| ||| |||||| |||| ||||||| |||||||| | ||||||||||| ||||||||||||| | ||||| |||| | |
|
|
| T |
3919987 |
caaaccgaaaaagcattcgactttgtttggtttggttcaaaaccgaaccgaaccaaactaaaccgatctagtttggtttggttcttaatttttaattttg |
3919888 |
T |
|
| Q |
187 |
agatc |
191 |
Q |
| |
|
||||| |
|
|
| T |
3919887 |
agatc |
3919883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 10721926 - 10721977
Alignment:
| Q |
72 |
atgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtt |
123 |
Q |
| |
|
|||||| ||||| |||||||||||||| |||| ||||||| ||||||||||| |
|
|
| T |
10721926 |
atgaaaccgaaaatccaaaccgaaaaagtatctgaccttgtttggttcggtt |
10721977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 12894100 - 12894051
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaac |
91 |
Q |
| |
|
|||||||||| |||||||| |||||||||| |||||| ||||||||||| |
|
|
| T |
12894100 |
gtaggggtgtgagtggttcagacaaaaccaacgaaatcaaaagtccaaac |
12894051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 176; Significance: 9e-95; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 43 - 331
Target Start/End: Complemental strand, 7352555 - 7352258
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaa----------ccgaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||| |||||||||||| ||||||||||||||||| || |||||| ||||||||||||| |
|
|
| T |
7352555 |
taggggtgtaattggttcagacaaaaccaacgaaaccgaaagtccaaatcaaaccgaaccgaaaaaatatccgactttatttggtttggtttgaaaccga |
7352456 |
T |
|
| Q |
133 |
ttcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcctt |
232 |
Q |
| |
|
| ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
7352455 |
tccgaaccaatcgaaaccggtctagtttggtttggttcatggtttttcatttcgagatccgtgaaaccgat-aatcaatccgatgataaccacactcctt |
7352357 |
T |
|
| Q |
233 |
attttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
7352356 |
attttactaatattatcctacgtcacacaaacttatagttagacccaaaattaaacataaaatacgttttaatccattcactttctctcatcttcatct |
7352258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 43 - 331
Target Start/End: Original strand, 46993258 - 46993552
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
|||||||| |||||||||| |||||| | ||||||| |||||| |||| | ||||||||| |||||||| |||| ||||||||||| ||| |||| ||| |
|
|
| T |
46993258 |
taggggtggaagtggttcggacaaaatcgatgaaattgaaagttcaaatctaaaaaatattcgaccttgtttgggtcggtttgaaattgatccgaatcaa |
46993357 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46993358 |
tcgaaactgatctagtttggtttggttcatggtttttcatttcgagatccgtgaaaccgattaaccaatccgatgataaccacactccttattttactaa |
46993457 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||| |||||||| |||||| |||||||||||||||||| |
|
|
| T |
46993458 |
tattatcgtacctcacacaaacttaaggttaagcccaaaattaaagtccaacataaaatactttttaatccattcaatttctctcatcttcatct |
46993552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 43 - 325
Target Start/End: Original strand, 39695087 - 39695370
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaa-----accgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcga |
137 |
Q |
| |
|
||||||||||||||||||| ||||||||| |||| ||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
39695087 |
taggggtgtaagtggttcgggcaaaaccaacgaaaccgaaagtccaacccaaaccgaagagatatccgaccttgtttggttcggtttgaaaccgatctga |
39695186 |
T |
|
| Q |
138 |
accaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttatttt |
237 |
Q |
| |
|
|||||||||||| ||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
39695187 |
accaatcgaaactgatatagtttggtttggttcatggtttttcatttcgaggtccgtgaaaccgatgaaccaatctgatgataacctcactccttatttt |
39695286 |
T |
|
| Q |
238 |
actaatattatcctacctcacacaaacttatggttatgcccaaaattaaacataaaatattttttaattcattcactttctctcatct |
325 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| || |||||| |||||||||||| |
|
|
| T |
39695287 |
ac----attatcttacctcacacaaacttatggttagacccaaaattaaacataaaataatttttcatccattcattttctctcatct |
39695370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 43 - 320
Target Start/End: Original strand, 7994955 - 7995234
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
||||||||||| |||||||| ||||||| |||| || ||||||||| |||||||||| ||||||| ||||||||||| ||| |||| |||||||| |
|
|
| T |
7994955 |
taggggtgtaaacggttcgtattaaaccaacgaaactgatagtccaaactgaaaaaatatttgaccttgtttggttcggttgaaaatcgatccgaaccaa |
7995054 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
| |||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
7995055 |
ttgaaaccgatctagtttggtttggttcatggtttttcattttgagattcgtgaaaccgatgaaccaatccgataataaccacactccttattttactaa |
7995154 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaatta-----aacataaaatattttttaattcattcactttctct |
320 |
Q |
| |
|
||||||| ||||| |||||||||||||||| | ||||||||| |||||| |||| |||||||| |||||| ||||||| |
|
|
| T |
7995155 |
tattatcttacct--cacaaacttatggtta-ggccaaaattaaagtcaacatagaatactttttaatccattcattttctct |
7995234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 88 - 221
Target Start/End: Complemental strand, 11727449 - 11727326
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcga |
187 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||| |||| ||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
11727449 |
aaaccgaaaaaatatatgaccttgtttggttcggtttgaaacc----------aatcaaaaccgatctagtttggtttggttcgtggtttttcatttcga |
11727360 |
T |
|
| Q |
188 |
gatccgtgaaaccgatgaaccaatccgatgataa |
221 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||| |
|
|
| T |
11727359 |
gatccgtaaaaccgataaaccaatccgatgataa |
11727326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 286
Target Start/End: Complemental strand, 46265436 - 46265238
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
||||||| |||| |||||||||||| ||||||||| ||||||| |||| ||||| |||||||||| |||||||||||| |||| |||||| |
|
|
| T |
46265436 |
ccaaaccaaaaatgtatccgaccttgtcgggttcggttcaaaaccgaaccgaatcaatctaaaccgatcttgtttggtttggttttcagtttgtcatttt |
46265337 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||||| |||||||||||||||| | ||| |||| ||||||| ||||||||| |||| |||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
46265336 |
gagatccaagaaaccgatgaaccaaatcaatgttaactccactcctcattttactattattgtccttcctcacac--acttatgattatgcccaaaatta |
46265239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 333
Target Start/End: Complemental strand, 3997128 - 3996825
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaa----------accgaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| || ||||||| ||| |||||| |||| ||||||| |
|
|
| T |
3997128 |
taggggtgtaagtggttcggacaaaaccaatgaaaccgaaagtccaaaccgtaccaaaccgaagaagaatccgactttgtttggtttggttcaaaaccga |
3997029 |
T |
|
| Q |
133 |
ttcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcctt |
232 |
Q |
| |
|
| |||||||| ||||| | || ||||||| ||||| | | ||||||||| ||||||| | |||| ||||||| | ||| || |||| |||||| |
|
|
| T |
3997028 |
acctaaccaatctaaaccaaccttgtttggttcggttc-tcggttttcattttgagatccaaggaacctatgaaccgaaccgttggtaactccactccca |
3996930 |
T |
|
| Q |
233 |
attttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa------cataaaatattttttaattcattcactttctctcatctt |
326 |
Q |
| |
|
|||||||||||| || | |||||||| ||||||| ||||||||||||||||| ||||||||| || |||| |||||||||||||||| || | |
|
|
| T |
3996929 |
attttactaataataactctcctcacac--acttatgattatgcccaaaattaaagtcaagcataaaatacttcttaagtcattcactttctctcgtcat |
3996832 |
T |
|
| Q |
327 |
catctca |
333 |
Q |
| |
|
||||||| |
|
|
| T |
3996831 |
catctca |
3996825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 2197775 - 2197623
Alignment:
| Q |
114 |
tggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatcc |
213 |
Q |
| |
|
|||||||||| |||||||| ||||||||| ||| ||| || |||| || ||||| |||||||||||| ||||||| ||||||||| |||||| || |
|
|
| T |
2197775 |
tggttcggttctaaaccgatctgaaccaatctaaatcgaccttgtttgattgggttctcggtttttcattttgagatccaagaaaccgatcaaccaaacc |
2197676 |
T |
|
| Q |
214 |
gatgataaccacactccttattttactaatattatcctacctcacacaaactt |
266 |
Q |
| |
|
|||| |||| |||||| ||||||||||||||||||| |||| |||| |||| |
|
|
| T |
2197675 |
gatgctaacttcactccccattttactaatattatccttcctcgcacacactt |
2197623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 331
Target Start/End: Original strand, 48070669 - 48070918
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcga |
187 |
Q |
| |
|
||||| |||||||||||||||||| ||| || |||| ||||||| ||||| || | ||||||||||| |||| || ||||| ||||||| |||| || |
|
|
| T |
48070669 |
aaaccaaaaaaatatccgaccttgtttgatttggttcaaaaccgaaccgaactaacctaaaccgatctagtttgattcggttctcggtttttaattttga |
48070768 |
T |
|
| Q |
188 |
gatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta-- |
285 |
Q |
| |
|
||||| ||||||| ||| | |||||| ||||| ||||| |||| | ||||| ||||| | ||||||| ||||||| ||| | |||||||| |
|
|
| T |
48070769 |
gatccaaagaaccgataaactgaaccgatgttaacctcactcaccatttcagtaataatatccctcttcacacacacttatgattaatctcaaaattaaa |
48070868 |
T |
|
| Q |
286 |
----aacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
||||||||||| || |||||||||||||||||| ||||| |||||| |
|
|
| T |
48070869 |
gtccaacataaaatacttcttaattcattcactttctttcatcctcatct |
48070918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 27227089 - 27227036
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaa |
96 |
Q |
| |
|
||||||||||||| ||||| |||||||| |||||||| |||||||||||||||| |
|
|
| T |
27227089 |
taggggtgtaagttgttcggacaaaaccgatgaaatcaaaagtccaaaccgaaa |
27227036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 250
Target Start/End: Original strand, 31136158 - 31136357
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
||||||||||| ||||||| || ||||| |||| | | || ||||||||||||| |||||||||||| ||| ||||||| |||| |||||||| |
|
|
| T |
31136158 |
taggggtgtaaatggttcggacgaaaccgatgacaccaaa---ccaaaccgaaaaagtatccgaccttgtttgattcggttcaaaac-----cgaaccaa |
31136249 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
| ||||| || || ||||||||||||| |||||| |||||||||||| |||||||||||| | |||||| ||| | ||||| | ||| || ||| |
|
|
| T |
31136250 |
cctaaaccaatataatttggtttggttcttggtttcaaatttcgagatccaaagaaccgatgaaccgaaccgatgctaaactcactcatcattatagtaa |
31136349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 287
Target Start/End: Complemental strand, 35738178 - 35738067
Alignment:
| Q |
174 |
gtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggtta |
273 |
Q |
| |
|
||||||||||| ||||||| | ||||||| |||||| | ||| ||||| |||||| |||||||||||||||||| | |||||| ||||||| ||| |
|
|
| T |
35738178 |
gtttttcattttgagatccaaggaaccgatcaaccaaactgattgtaaccccactccccattttactaatattatccctcatcacac--acttatgatta |
35738081 |
T |
|
| Q |
274 |
tgcccaaaattaaa |
287 |
Q |
| |
|
||||||||||||| |
|
|
| T |
35738080 |
ggcccaaaattaaa |
35738067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 287
Target Start/End: Complemental strand, 25545332 - 25545139
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||| ||| |||||||| ||||||||||| ||||||| |||||| | ||||||||||| ||||||||||||| |||| |||| | |||| |
|
|
| T |
25545332 |
aaaaagtattcgaccttgattggttcggttcaaaaccgaactaaaccaacctaaaccgatctagtttggtttggttctcaacttttaattttaaaatcca |
25545233 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|||| ||||| | | || ||| ||||| |||||| |||||| |||||||||||| ||||||| | ||||||| ||| || |||||||||| |
|
|
| T |
25545232 |
aagaaccaatgaatcgaaccaatgctaacctcactccccattttagtaatattatcctgcctcacatacacttatgattaagctcaaaattaaa |
25545139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 176; Significance: 9e-95; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 9e-95
Query Start/End: Original strand, 86 - 333
Target Start/End: Complemental strand, 28319423 - 28319176
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||||||||||||||| ||| ||| ||||||||||||||||||| | |||||||||| ||| |||| || |||||||||||||||||||||||||||| |
|
|
| T |
28319423 |
ccaaaccgaaaaaatatctgacattgtttggttcggtttgaaaccgttccgaaccaatcaaaatcgatttaatttggtttggttcatggtttttcatttc |
28319324 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||| |||||| | |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
28319323 |
gagattcgtgaacctgatgaatcaatctgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttaggcccaaaatta |
28319224 |
T |
|
| Q |
286 |
aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| ||||||||| |
|
|
| T |
28319223 |
aacataaaatattttttaatcaattcactttctctcattttcatctca |
28319176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 42 - 331
Target Start/End: Complemental strand, 23108098 - 23107789
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccg |
131 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||| |
|
|
| T |
23108098 |
gtaggggtgtaagtggttcggacaaaaccaacgaaaccgaaagtccaaaccgaaccaaacaggaaaaatatccgaccttgtttggtttggtttgaaaccg |
23107999 |
T |
|
| Q |
132 |
attcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaacc----aatccgatgataaccacac |
227 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |
|
|
| T |
23107998 |
atccgaaccaatcgaaaccgatctagtttggtttgattcatggtttttcatttcgagatccgtgaaaccgatgaaccaatcaatccgatgataaccatac |
23107899 |
T |
|
| Q |
228 |
tccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctc |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||| |||||||||||||| |
|
|
| T |
23107898 |
tccttattttactaatattatcctacctcacacaaacttatggttaggctcaaaattaaagtccaacataaaatactttttaatccattcactttctcta |
23107799 |
T |
|
| Q |
322 |
atcttcatct |
331 |
Q |
| |
|
||| |||||| |
|
|
| T |
23107798 |
atcatcatct |
23107789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 86 - 326
Target Start/End: Complemental strand, 24466448 - 24466202
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||| ||||||||||| || |||| ||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
24466448 |
ccaaactgaaaaaatatctgatcttgtttggttcggtttgaaaccgatccgaaccaattgaaaccgatctagtttgatttggttcatggtttttcatttt |
24466349 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
24466348 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttaggctcaaaatta |
24466249 |
T |
|
| Q |
286 |
------aacataaaatattttttaattcattcactttctctcatctt |
326 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
24466248 |
aagtccaacataaaatactttttaatccattcactttctctcatctt |
24466202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 94 - 260
Target Start/End: Original strand, 4413515 - 4413681
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||||||||||| |||| |||||||||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4413515 |
aaaaaatatccgatcttgtttggttcggtttaaaaccgatccgaaccaatcgaaaccgatctagtttgctttggttcatggtttttcatttcgagatccg |
4413614 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacac |
260 |
Q |
| |
|
|||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4413615 |
tgaaaccgataaaccaatccgatgataatcacactccttattttactagtattatcctacctcacac |
4413681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 333
Target Start/End: Original strand, 42141257 - 42141545
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccg-aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaacca |
141 |
Q |
| |
|
|||||| |||||||||| | |||||||| |||||| ||||| ||||||||| ||||||||| ||||||| ||||||||||| ||||||| |||| | |
|
|
| T |
42141257 |
taggggcgtaagtggttaggacaaaaccgatgaaaccgaaaatccaaaccgaaaaaaatattcgaccttctttggttcggttcaaaaccgaactgaacaa |
42141356 |
T |
|
| Q |
142 |
atcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttacta |
241 |
Q |
| |
|
| | ||| ||||||| ||||||| ||||| |||||||| |||| ||||||| ||| ||||| | |||||| ||| | ||||||| |||||| || |
|
|
| T |
42141357 |
acctaaatcgatctactttggttcggttcttggtttttaattttgagatcc---aaa-----gaaccgaaccgatgctaaactcactcctcattttagta |
42141448 |
T |
|
| Q |
242 |
atattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||||||| | ||||||||| ||||||| ||| | |||||||| ||||||||||| | |||| | ||||||||||||||||| |||||||| |
|
|
| T |
42141449 |
atattatacctcctcacacacacttatgattaatctcaaaattaaagtccaacataaaatactccttaa-tgattcactttctctcatcatcatctca |
42141545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 245
Target Start/End: Complemental strand, 8606265 - 8606106
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
||||||||||||| ||||| || ||| |||| |||||| ||||| | ||||||||||| |||||||||| |||||| ||||| ||||||||||| |
|
|
| T |
8606265 |
ccaaaccgaaaaagtatccaactttgtttggctcggttcaaaaccaaatcgaaccaatctaaaccgatcttggttggttcggttctcagtttttcatttt |
8606166 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatat |
245 |
Q |
| |
|
||||||| | |||| ||||| | | |||||| |||||||||||| ||||||||||||| |
|
|
| T |
8606165 |
gagatccaaggaaccaatgaatcgaaccgatggtaaccacactccccattttactaatat |
8606106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 287
Target Start/End: Complemental strand, 53393337 - 53393087
Alignment:
| Q |
47 |
ggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccgattcg |
136 |
Q |
| |
|
||||||||||||||| |||||||| |||||| ||||| ||||||||||| ||| |||||||||||| |||||||||||| |||| || || |
|
|
| T |
53393337 |
ggtgtaagtggttcggacaaaaccgatgaaaccgaaaatccaaaccgaaccaaaccaaaaaagtatccgaccttgtttggttcggtttaaaactgaaccg |
53393238 |
T |
|
| Q |
137 |
aaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattt |
236 |
Q |
| |
|
|||||| | ||||||||||| ||||||| ||||| ||||| | | || || |||| |||||||||||| | |||||| ||||| |||| |||| |
|
|
| T |
53393237 |
aaccaacctaaaccgatctagtttggttcggttctcggtttataactttgaaatccaatgaaccgatgaaccgaaccgatgctaacctcactttccattt |
53393138 |
T |
|
| Q |
237 |
tactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|| ||||||||||| | ||||||| |||| || ||| || |||||||||| |
|
|
| T |
53393137 |
tagtaatattatccctcttcacacacacttctgattaagctcaaaattaaa |
53393087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 13207547 - 13207472
Alignment:
| Q |
48 |
gtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtt |
123 |
Q |
| |
|
||||||| |||||| |||||||| |||||||||||| |||||||||||||| |||| || |||| ||||||||||| |
|
|
| T |
13207547 |
gtgtaagcggttcggacaaaaccgatgaaatcgaaaatccaaaccgaaaaagtatctgatcttgtttggttcggtt |
13207472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 261
Target Start/End: Original strand, 8056816 - 8056939
Alignment:
| Q |
137 |
aaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattt |
236 |
Q |
| |
|
|||||||| ||||||| || ||||||| ||||| | | ||||||||| ||||||| ||||||||||||| | ||||| ||||| |||||| |||| |
|
|
| T |
8056816 |
aaccaatctaaaccgaacttgtttggttcggttc-tcgattttcattttgagatccaagaaaccgatgaactgaaccgatcctaaccccactccccattt |
8056914 |
T |
|
| Q |
237 |
tactaatattatcctacctcacaca |
261 |
Q |
| |
|
||||||||||||||| ||||||||| |
|
|
| T |
8056915 |
tactaatattatccttcctcacaca |
8056939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 287
Target Start/End: Complemental strand, 19682091 - 19682001
Alignment:
| Q |
197 |
aaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|||||||||||||| |||||| ||||| |||| || |||||| ||||||||||| |||||| | ||||| | ||| || |||||||||| |
|
|
| T |
19682091 |
aaccgatgaaccaaaccgatgctaacctcacttctcattttagtaatattatcccttctcacatacacttacgattaagctcaaaattaaa |
19682001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 39839153 - 39839104
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaacc |
92 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||| ||||| |||||||| |
|
|
| T |
39839153 |
taggggtgtaagtggttcggacgaaaccgatgaaaccgaaaatccaaacc |
39839104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0879 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0879
Description:
Target: scaffold0879; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 86 - 326
Target Start/End: Complemental strand, 713 - 467
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||| ||||||||||| || |||| ||||||||||||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
713 |
ccaaactgaaaaaatatctgatcttgtttggttcggtttgaaaccgatccgaaccaattgaaaccgatctagtttgatttggttcatggtttttcatttt |
614 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
613 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttaggctcaaaatta |
514 |
T |
|
| Q |
286 |
------aacataaaatattttttaattcattcactttctctcatctt |
326 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
513 |
aagtccaacataaaatactttttaatccattcactttctctcatctt |
467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 168; Significance: 5e-90; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 86 - 305
Target Start/End: Original strand, 19947761 - 19947980
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||| ||||||||||||| | ||||||||||| | |||||| |||| ||||||||||||||||||||||| |
|
|
| T |
19947761 |
ccaaaccgaaaaaatatccgacattgtttggttcagtttgaaaccgatccaaaccaatcgaatctgatctactttgatttggttcatggtttttcatttc |
19947860 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
19947861 |
aagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttaggcccaaaatta |
19947960 |
T |
|
| Q |
286 |
aacataaaatattttttaat |
305 |
Q |
| |
|
||||||| ||| |||||||| |
|
|
| T |
19947961 |
aacataagatactttttaat |
19947980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 92 - 283
Target Start/End: Complemental strand, 16746548 - 16746357
Alignment:
| Q |
92 |
cgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatc |
191 |
Q |
| |
|
||||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
16746548 |
cgaaaaaatatccaaccttgtttggttcggtttgaaaccgatccaaaccaatcgaaaccgatctagtttggtttgattcatggtttttcatttcgagatc |
16746449 |
T |
|
| Q |
192 |
cgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaat |
283 |
Q |
| |
|
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16746448 |
cgtgaaatcgatgaaccaatccgatgataacctcactccttattttactaatattatcctacctcacacaaacttatggttaggcccaaaat |
16746357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 141; E-Value: 7e-74
Query Start/End: Original strand, 43 - 325
Target Start/End: Original strand, 31895896 - 31896181
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaa----------accgaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
31895896 |
taggggtgtaagtggttcggacaaaaccaacaaaatcgaaagtccaaactgaaccaaaccgaaaaaatatccgaccttgtttggttcggtttgaaaccga |
31895995 |
T |
|
| Q |
133 |
ttcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcctt |
232 |
Q |
| |
|
| ||||||||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
31895996 |
tctgaaccaatccaaaccgatctagtttggtttggttcatgattttttatttcgtgatccgtgaaa-------------ccgatgataaccacactcctt |
31896082 |
T |
|
| Q |
233 |
attttactaatattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatct |
325 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
31896083 |
attttactaatattatcctacctcacacaaacttatggttaggcccaaaattaaagtccaacataaaatattttataatccattcactttctctcatct |
31896181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 16746726 - 16746550
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaa----------aaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||| ||||||||||||| |||||||||| |||| |||||||| |||||||| ||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
16746726 |
tagggatgtaagtggttcggacaaaaccaacgaaaccgaaagtctaaaccgaaccaaatcgaaaaaatatccaaccttgtttggttcggtttgaaaccga |
16746627 |
T |
|
| Q |
133 |
ttcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaacca |
209 |
Q |
| |
|
| | |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
16746626 |
tccaaaccaatcgaaaccgatctagtttggtttgattcatggtttttcatttcgagatccgtgaaatcgatgaacca |
16746550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 284
Target Start/End: Complemental strand, 1498326 - 1498129
Alignment:
| Q |
87 |
caaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcg |
186 |
Q |
| |
|
||||| || |||||||||||||||| ||||||||||| ||||||| ||||||| | |||||||| || || ||||||||| || ||| |||| | |
|
|
| T |
1498326 |
caaactgagaaaatatccgaccttgtttggttcggttcaaaaccgaactgaaccaacctaaaccgatgtagttaagtttggttctcagtattttattttg |
1498227 |
T |
|
| Q |
187 |
agatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatt |
284 |
Q |
| |
|
|||||| ||||||||||||| | |||||| |||| ||||| |||||| ||||||||||| ||| |||| ||||||| ||| || ||||||| |
|
|
| T |
1498226 |
agatccaataaaccgatgaaccgaaccgatgctaacatgactccccattttagtaatattatcccttctcgcacacacttatgattaagctcaaaatt |
1498129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 111
Target Start/End: Complemental strand, 41092163 - 41092105
Alignment:
| Q |
53 |
agtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttg |
111 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||| |||| ||||| |||| ||||||| |
|
|
| T |
41092163 |
agtggttcgaacaaaaccaatgaaaccgaaagtcaaaactgaaaaggtatctgaccttg |
41092105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 153; Significance: 5e-81; HSPs: 13)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 94 - 286
Target Start/End: Original strand, 46655576 - 46655768
Alignment:
| Q |
94 |
aaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccg |
193 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||| ||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
46655576 |
aaaaaatatccgaccttacttggttcggtttgaaaccgatccgaaccaatcaaaaccaatctagtttggtttggttcatgctttttcatttcgagatccg |
46655675 |
T |
|
| Q |
194 |
tgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaa |
286 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
|
|
| T |
46655676 |
tgaaaccgatgaaccaatccaatgataaccacacttcttattttactaatattatcctacctcacacaaatttatggttaggcccaaaattaa |
46655768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 46 - 333
Target Start/End: Original strand, 44471020 - 44471323
Alignment:
| Q |
46 |
gggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaa----------accgaaaaaatatccgaccttgcttggttcggtttgaaaccgattc |
135 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||| ||||| |||||||| |||||||||||| || |||||||| ||||||| | |
|
|
| T |
44471020 |
gggtgtaagtggttcggacaaaaccgatgaaatcgaaaatccaaaccgaaccaaaccgaaaatgtatccgaccttgtttagttcggttcaaaaccgaacc |
44471119 |
T |
|
| Q |
136 |
gaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttatt |
235 |
Q |
| |
|
|||||||| ||||||||||| ||||||| ||||| |||||||| |||| || |||| |||||||||||| | |||||| |||| ||||| | | |
|
|
| T |
44471120 |
aaaccaatctaaaccgatctagtttggttcggttcttggtttttaattttgaaatccaaagaaccgatgaaccgaaccgatgctaacataactccccagt |
44471219 |
T |
|
| Q |
236 |
ttactaatattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcat |
329 |
Q |
| |
|
||| ||||||||||| ||||| ||| ||||||| ||| || |||||||| ||||||||||| | |||||||||||||||||| ||| |||| |
|
|
| T |
44471220 |
ttagtaatattatccctcctcaaacacacttatgattaagctcaaaattaaaggctaacataaaatactccataattcattcactttctcccattatcat |
44471319 |
T |
|
| Q |
330 |
ctca |
333 |
Q |
| |
|
|||| |
|
|
| T |
44471320 |
ctca |
44471323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 86 - 261
Target Start/End: Complemental strand, 11503459 - 11503284
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
||||||| |||| |||||||||||| |||| |||| ||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||| |
|
|
| T |
11503459 |
ccaaaccaaaaatgtatccgaccttgtctggtaaggttcaaaaccgaaccgaaccaatcgaaaccgatcttatttggtttggttctcgatttttcatttt |
11503360 |
T |
|
| Q |
186 |
gagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacaca |
261 |
Q |
| |
|
||||||| ||||||||| |||| | || ||| ||||| |||||| ||||||||| |||||||| ||||||||| |
|
|
| T |
11503359 |
gagatccaagaaaccgataaaccgaacccatgctaacctcactccccattttactattattatccctcctcacaca |
11503284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Complemental strand, 30554670 - 30554588
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttc |
170 |
Q |
| |
|
||||||||||| |||||||||||| || |||||||| ||| ||| |||||||||| ||||||||||| ||||||| ||||| |
|
|
| T |
30554670 |
aaaccgaaaaagtatccgaccttgtttagttcggttcaaaatcgaaccgaaccaatctaaaccgatctagtttggttcggttc |
30554588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 330
Target Start/End: Complemental strand, 44682129 - 44681881
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcg-aaaccgatctattttggtttggttcatggtttttcatttcg |
186 |
Q |
| |
|
||||||||||| ||| |||||||| ||||||||| | ||||||| ||||||| | ||||||||||| ||||||||||||| |||||||| |||| | |
|
|
| T |
44682129 |
aaaccgaaaaagtatacgaccttgtttggttcggatcaaaaccgaactgaaccaaacctaaaccgatctagtttggtttggttcttggtttttaattttg |
44682030 |
T |
|
| Q |
187 |
agatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta- |
285 |
Q |
| |
|
| ||||| |||||| |||| | |||||| ||||| |||| | | || | ||||||||||| |||||||| ||||||| ||| || |||||||| |
|
|
| T |
44682029 |
aaatccgatgaaccgacaaaccgaaccgatgctaacctcacttccca-ttgagtaatattatccgttctcacacacacttatgattaagctcaaaattaa |
44681931 |
T |
|
| Q |
286 |
-----aacataaaatattttttaattcattcactttctctcatcttcatc |
330 |
Q |
| |
|
||||||||||| | |||||||||| |||||||| |||| ||||| |
|
|
| T |
44681930 |
agtccaacataaaatactccttaattcatttactttctcccatcatcatc |
44681881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 86 - 132
Target Start/End: Original strand, 46892657 - 46892703
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||| ||||||| |
|
|
| T |
46892657 |
ccaaaccgaaaaaatatccgaccttgtttggttcggtttaaaaccga |
46892703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 779629 - 779533
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcattt |
184 |
Q |
| |
|
||||||||||| ||||| |||||| || |||||||| |||| || ||||||||| | ||||| ||||| ||||||| ||||| |||||||| |||| |
|
|
| T |
779629 |
aaaccgaaaaagtatccaaccttgtttagttcggttcaaaacagaatcgaaccaacctaaaccaatctagtttggttcggttcttggtttttaattt |
779533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 333
Target Start/End: Original strand, 26757593 - 26757901
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaacc----------gaaaaaatatccgaccttgcttggttcggtttgaaaccga |
132 |
Q |
| |
|
||||||||||||||||| | ||||||||||||||||||||| |||||| | |||||| ||| |||| ||| |||||| |||| |||| || |
|
|
| T |
26757593 |
taggggtgtaagtggtttggacaaaaccaatgaaatcgaaaatccaaatcaaacaaaatcgaaaaagtattcgacgttgtttggtttagtttaaaactga |
26757692 |
T |
|
| Q |
133 |
ttcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactcctt |
232 |
Q |
| |
|
|||||||| | ||| |||| || |||||| ||||| ||| |||| |||| ||||||| || |||| ||| | ||||| ||||| ||||| |
|
|
| T |
26757693 |
accgaaccaacctaaatcgatatagattggttcggttcttggattttaattttgagatccaaagaatcgataaactgaaccgatagtaacctcactctcc |
26757792 |
T |
|
| Q |
233 |
attttactaatattatcctacctcacacaaac--ttatggttatgcccaaaattaaa------cataaaatattttttaattcattcactttctctcatc |
324 |
Q |
| |
|
|||||| |||||||||||| || |||||| || ||||| ||| || |||||||||| ||||||||| | |||||||||||||||||||||||| |
|
|
| T |
26757793 |
attttagtaatattatccttccacacacacacacttatgattaagctcaaaattaaagttcaacataaaatactccttaattcattcactttctctcatc |
26757892 |
T |
|
| Q |
325 |
ttcatctca |
333 |
Q |
| |
|
|||||||| |
|
|
| T |
26757893 |
atcatctca |
26757901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 325
Target Start/End: Original strand, 46892755 - 46892884
Alignment:
| Q |
202 |
atgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaat |
295 |
Q |
| |
|
||||||||| |||||| ||||| ||||||| |||||| ||||||||||| | ||||||| ||||| | || | |||||||| |||||||||| |
|
|
| T |
46892755 |
atgaaccaaaccgatgctaacctcactcctcattttagtaatattatccctcatcacacacacttacgattgatctcaaaattaaagttcaacataaaat |
46892854 |
T |
|
| Q |
296 |
attttttaattcattcactttctctcatct |
325 |
Q |
| |
|
| | ||||||||||||||||||||||||| |
|
|
| T |
46892855 |
actccttaattcattcactttctctcatct |
46892884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 87 - 333
Target Start/End: Original strand, 28550497 - 28550749
Alignment:
| Q |
87 |
caaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcg |
186 |
Q |
| |
|
|||||||||||| |||| || ||| ||||||||||| || |||| |||||||| |||| |||||| ||||||| | ||| ||||||| |||| | |
|
|
| T |
28550497 |
caaaccgaaaaagtatctaactttgtttggttcggttcaaatccgaaccgaaccaacttaaacggatctagtttggttcgattctcggtttttaattttg |
28550596 |
T |
|
| Q |
187 |
agatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta- |
285 |
Q |
| |
|
||||| |||||||||||| | ||||| ||||| |||||| |||||| ||||||||| ||||||||| ||||||| ||| | |||||||| |
|
|
| T |
28550597 |
agatctaaagaaccgatgaaccgaatcgatgttaacctcactccctattttggcaatattatctctcctcacacacacttatgattaaactcaaaattaa |
28550696 |
T |
|
| Q |
286 |
-----aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||| ||||||| || | ||||||||||||||||| |||| |||||||| |
|
|
| T |
28550697 |
agtccaacgtaaaatacttctcaattcattcactttctcccatcatcatctca |
28550749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 250
Target Start/End: Original strand, 22240516 - 22240724
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaacca |
141 |
Q |
| |
|
|||| |||||||| | |||| ||||||| ||||||||||||| |||||||||||| ||||||||| || ||||| |||| || ||| ||||||| |
|
|
| T |
22240516 |
gtagtggtgtaagcgattcggtcaaaaccgatgaaatcgaaaggtcaaaccgaaaaagtatccgaccatgtctggttaggttcataatcgaaccgaacca |
22240615 |
T |
|
| Q |
142 |
atcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttacta |
241 |
Q |
| |
|
| | ||| ||| || | |||| | ||| |||||| ||||| ||||||| | ||||||| |||||| |||||||||| | ||||| |||||| ||| |
|
|
| T |
22240616 |
aactaaatcgaccttgctgggttcgattctcggttttacattttgagatccaaggaaccgataaaccaaaccgatgataatctcactctctatttttcta |
22240715 |
T |
|
| Q |
242 |
atattatcc |
250 |
Q |
| |
|
||| ||||| |
|
|
| T |
22240716 |
atactatcc |
22240724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 164
Target Start/End: Original strand, 44285615 - 44285691
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtt |
164 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||||| ||||||| |||||||| | ||| |||| || ||||||| |
|
|
| T |
44285615 |
aaaccgaaaaaatatatgaccttgtttggttcggttcaaaaccgaaccgaaccaacctaaatcgatttagtttggtt |
44285691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 47831317 - 47831242
Alignment:
| Q |
175 |
tttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatcct |
251 |
Q |
| |
|
||||| |||| ||||||| ||||| ||||||||| |||||| ||||| |||||| ||||||||||||||||||| |
|
|
| T |
47831317 |
ttttttattttgagatccaaaaaacctatgaaccaaaccgatgttaacc-cactcccaattttactaatattatcct |
47831242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0565 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0565
Description:
Target: scaffold0565; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 50 - 331
Target Start/End: Complemental strand, 2013 - 1729
Alignment:
| Q |
50 |
gtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaac |
149 |
Q |
| |
|
|||||||||||| |||||| ||| |||| | ||||| |||| ||||||||||||||||||| |||||||||||||||| |||| ||||||||| |||| |
|
|
| T |
2013 |
gtaagtggttcggacaaaatcaacgaaaccaaaagttcaaattgaaaaaatatccgaccttgtttggttcggtttgaaatcgatcggaaccaatcaaaac |
1914 |
T |
|
| Q |
150 |
cgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaatattatc |
249 |
Q |
| |
|
|||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1913 |
tgatctactttggtttggttcatggtttttaatttcgagattcgtgaaaccgatgaaccaatccgatgataacaacactccttattttactaatattatt |
1814 |
T |
|
| Q |
250 |
ctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
|||||| |||||||||||||||| | ||||||| ||||||||||| |||||||| |||||||||||||||||| |||||| |
|
|
| T |
1813 |
ctacct--cacaaacttatggtta-ggttaaaattaaaatccaacataaaatactttttaatccattcactttctctcatcatcatct |
1729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 69; Significance: 6e-31; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 43 - 287
Target Start/End: Original strand, 13756 - 14000
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaa |
142 |
Q |
| |
|
|||||||||||| |||||| |||||| |||||||| ||||||||||||| ||| ||| |||||||| |||||| ||| ||| ||| |||||||| |
|
|
| T |
13756 |
taggggtgtaagcggttcggacaaaatcaatgaaactaaaagtccaaaccggaaatgtattcgaccttgtctggttcagttcaaaatcgaaccgaaccaa |
13855 |
T |
|
| Q |
143 |
tcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatccgatgataaccacactccttattttactaa |
242 |
Q |
| |
|
|| |||| ||||| |||||||||||| |||||||||||| ||||||| ||||||||||| | | |||||| ||||| |||||| ||||||||| |
|
|
| T |
13856 |
tctaaactgatcttatttggtttggttatcggtttttcattttgagatccaataaaccgatgaatcgaaccgatgctaacctcactccccattttactat |
13955 |
T |
|
| Q |
243 |
tattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
|||||| | | ||||||| ||||||| |||||||||||||||| |
|
|
| T |
13956 |
tattatacctcttcacacacacttatgagtatgcccaaaattaaa |
14000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 90
Target Start/End: Original strand, 33729 - 33776
Alignment:
| Q |
43 |
taggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaa |
90 |
Q |
| |
|
||||||||||||||||||| | ||||||||||||| ||||||||||| |
|
|
| T |
33729 |
taggggtgtaagtggttcggataaaaccaatgaaactgaaagtccaaa |
33776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 100 - 287
Target Start/End: Original strand, 11846307 - 11846494
Alignment:
| Q |
100 |
tatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaac |
199 |
Q |
| |
|
|||||||||||| |||||| |||| ||||||| ||||||| ||||||||||| ||||||| ||||| ||||||| |||| ||||||| ||| |
|
|
| T |
11846307 |
tatccgaccttgtttggtttggttcaaaaccgaactgaaccaacttaaaccgatctagtttggttcggttctcggtttttaattttgagatccaatgaac |
11846406 |
T |
|
| Q |
200 |
cgatgaaccaatccgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa |
287 |
Q |
| |
|
| ||||||||| |||| || || |||||| |||||| ||||||||||| ||||||||| ||||||| ||| || |||||||||| |
|
|
| T |
11846407 |
caatgaaccaaattgatgctatcctcactccccattttagtaatattatccctcctcacacacacttatgattaagctcaaaattaaa |
11846494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 333
Target Start/End: Original strand, 9826817 - 9827043
Alignment:
| Q |
113 |
ttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttcgagatccgtgaaaccgatgaaccaatc |
212 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||||||| ||||||| | ||| ||||||| |||| || |||| |||||||||||||| | |
|
|
| T |
9826817 |
ttggttcggttgaaaaccgaaccgaaccaacataaaccgatctagtttggttcgattctcggtttttaattttgaaatccaaagaaccgatgaaccaaac |
9826916 |
T |
|
| Q |
213 |
cgatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaatta------aacataaaatattttttaatt |
306 |
Q |
| |
|
|||| ||||| |||| | ||||| ||||||||||| ||||||||| |||||| ||| || ||| |||| ||||||||||| | |||||| |
|
|
| T |
9826917 |
tgatgttaacctcacttcccgttttagtaatattatccctcctcacacacgcttatgattaagctcaatattaaagtccaacataaaatactccttaatt |
9827016 |
T |
|
| Q |
307 |
cattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||||||||||||| |||| |||||||| |
|
|
| T |
9827017 |
cattcactttctcccatcatcatctca |
9827043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 214 - 333
Target Start/End: Original strand, 1208739 - 1208864
Alignment:
| Q |
214 |
gatgataaccacactccttattttactaatattatcctacctcacacaaacttatggttatgcccaaaattaaa------cataaaatattttttaattc |
307 |
Q |
| |
|
|||| ||||| |||||||| |||||||||| |||||| | ||||||| |||||| ||| ||||||||||||| ||||||||| | ||||||| |
|
|
| T |
1208739 |
gatgctaaccccactccttgttttactaatgttatccctcttcacacacacttatcattaggcccaaaattaaagttcagcataaaatactacttaattc |
1208838 |
T |
|
| Q |
308 |
attcactttctctcatcttcatctca |
333 |
Q |
| |
|
|||||||||| |||||| |||||||| |
|
|
| T |
1208839 |
attcactttccctcatcatcatctca |
1208864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 333
Target Start/End: Original strand, 5416284 - 5416331
Alignment:
| Q |
286 |
aacataaaatattttttaattcattcactttctctcatcttcatctca |
333 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||||||| |||||||| |
|
|
| T |
5416284 |
aacataaaatagtctttaattcattcactttctctcatcatcatctca |
5416331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 23301464 - 23301570
Alignment:
| Q |
86 |
ccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatttc |
185 |
Q |
| |
|
||||||||||||| || |||||||| ||||||||||| ||||||| |||||||| | |||| |||||| ||||||| ||||| |||||| |||| |
|
|
| T |
23301464 |
ccaaaccgaaaaataattcgaccttgtttggttcggttcaaaaccgaaccgaaccaacctaaactgatctagtttggttcggttctcagtttttaatttt |
23301563 |
T |
|
| Q |
186 |
gagatcc |
192 |
Q |
| |
|
||||||| |
|
|
| T |
23301564 |
gagatcc |
23301570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 23585862 - 23585990
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgaccttgcttggttcggtttgaaaccgattcgaacca |
141 |
Q |
| |
|
|||||||||||||| ||| | |||||||| |||||| |||| || ||| |||||| |||||||||||| || |||||||| ||||||| | ||| | |
|
|
| T |
23585862 |
gtaggggtgtaagtagtttggacaaaaccgatgaaactgaaaatctaaatagaaaaagtatccgaccttgttttgttcggttcaaaaccgaaccaaacta |
23585961 |
T |
|
| Q |
142 |
atcgaaaccgatctattttggtttggttc |
170 |
Q |
| |
|
| |||||||| || ||||||||||||| |
|
|
| T |
23585962 |
acgtaaaccgatatagtttggtttggttc |
23585990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 2454036 - 2453993
Alignment:
| Q |
286 |
aacataaaatattttttaattcattcactttctctcatcttcat |
329 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| |||| |||| |
|
|
| T |
2454036 |
aacataaaatatttcttaattcattcactttctcccatcatcat |
2453993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 285 - 331
Target Start/End: Complemental strand, 26186634 - 26186588
Alignment:
| Q |
285 |
aaacataaaatattttttaattcattcactttctctcatcttcatct |
331 |
Q |
| |
|
|||| ||||||| | ||||||||||||||||||||||||| |||||| |
|
|
| T |
26186634 |
aaacttaaaatactctttaattcattcactttctctcatcatcatct |
26186588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 344518 - 344452
Alignment:
| Q |
42 |
gtaggggtgtaagtggttcgtacaaaaccaatgaaatcgaaagtccaaaccgaaaaaatatccgacc |
108 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||| ||||| |||||||| ||||| ||| ||||| |
|
|
| T |
344518 |
gtaggggtgtaagtggttcggacaaaagtgatgaaaccgaaaatccaaaccaaaaaagtattcgacc |
344452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0564 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0564
Description:
Target: scaffold0564; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 190
Target Start/End: Original strand, 6366 - 6472
Alignment:
| Q |
88 |
aaaccgaaaaaatatccgaccttgct----tggttcggtttgaaaccgattcgaaccaatcgaaaccgatctattttggtttggttcatggtttttcatt |
183 |
Q |
| |
|
||||||||||| |||||||||| ||| ||||||||||| ||| || ||||||||| | ||||||||||| |||| | |||||| ||||||| ||| |
|
|
| T |
6366 |
aaaccgaaaaagtatccgacctagctagtttggttcggtttaaaattgaatcgaaccaacctaaaccgatctagtttgatctggttctcggtttttaatt |
6465 |
T |
|
| Q |
184 |
tcgagat |
190 |
Q |
| |
|
| ||||| |
|
|
| T |
6466 |
ttgagat |
6472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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