View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4149_low_17 (Length: 211)
Name: NF4149_low_17
Description: NF4149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4149_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 28479733 - 28479541
Alignment:
| Q |
1 |
ttgtagtaattgtatactacatgatacatttctgtctacatatagtttgagagattcaactagcactttacatgccatatccctgtaatagggtcgagat |
100 |
Q |
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| T |
28479733 |
ttgtagtaatataatactacatgatacatttctgtctacatatagtttgagagattcaactagcactttacatgccatatccctgtaat--ggtccagat |
28479636 |
T |
|
| Q |
101 |
aggggannnnnnnaaatcacagatgtag-aaaaagtaatatagtaccctatccagaccctactcattgtcatccctacacatgtgaccgcctcct |
194 |
Q |
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|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
28479635 |
aggggattttttcaaatcacagatgtagaaaaaagtaatatagtaccctatccagaccctactcattgtcatccctacacatgtggccgcctcct |
28479541 |
T |
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