View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4149_low_9 (Length: 358)
Name: NF4149_low_9
Description: NF4149
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4149_low_9 |
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Alignment Details
Target: chr5 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 52 - 257
Target Start/End: Original strand, 4712472 - 4712679
Alignment:
| Q |
52 |
gtaagaaaagtggaacatgtgttacatatatgtattatttgcattatatggaaacaagcatttttgtttttgtaattaatttgagtaagcgcagttcaaa |
151 |
Q |
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| T |
4712472 |
gtaagaaaagtggaacatgtgttacatatatgtattatttgcattatatggaaacaagcatttttgtttttgtaattaatttgagtaagcgcagttcaaa |
4712571 |
T |
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| Q |
152 |
tgataaaaagttgcgagacatttgatatgtagaagcgcaaattctaatcaacaatgttcaagttcttcacattta--gtgtgtgagtttagttaccggac |
249 |
Q |
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| T |
4712572 |
tgataaaaagttgcgagacatttgatatgtagaagcgcaaattctaatcaacaatgttcaagttcttcacatttagtgtgtgtgagtttagttaccgaac |
4712671 |
T |
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| Q |
250 |
tatttgcc |
257 |
Q |
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|||||||| |
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| T |
4712672 |
tatttgcc |
4712679 |
T |
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