View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4150_low_2 (Length: 372)
Name: NF4150_low_2
Description: NF4150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4150_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 1 - 340
Target Start/End: Complemental strand, 30483433 - 30483094
Alignment:
| Q |
1 |
ccaagtgagaaagaggatgtttggtagagcttggccttttagggcaccagtcagagatggccttgttaccttatggcctcaattaatggctgcccaaagg |
100 |
Q |
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| T |
30483433 |
ccaagtgagaaagaggatgtttggtagagcttggccttttagggcaccagtcagagatggccttgttaccttatggcctcaattaatggctgcccaaagg |
30483334 |
T |
|
| Q |
101 |
agacatgtcccttgtgttgtaagtttttatgatataaatttaatttgggtcgtgttaacctggcactgattaaggaaaccaataacaaatttcgcaaaac |
200 |
Q |
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| T |
30483333 |
agacatgtcccttgtgttgtaagtttttatgatatgaatttaatttgggtcgtgttaacctggcactgattaaggaaaccaataacaaatttcgcaaaac |
30483234 |
T |
|
| Q |
201 |
gcagaatgatgaagtagcaaccacgtggctaaacaacgatgcagtcaggaaagccattcatgttgataaggtatgcagggaaaaaatttaattacactaa |
300 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30483233 |
gcagaatgatgaagtagcaaccacatggctaaacaacgatgcagtcaggaaagccattcatgttgataaggtatgcagggaaaaaatttaattacactaa |
30483134 |
T |
|
| Q |
301 |
gggaaaaaattaatatattgaggactaattaatttatgat |
340 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
30483133 |
gggaaaaaattaatatattgaggactaattaatttatgat |
30483094 |
T |
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