View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4151_low_3 (Length: 447)
Name: NF4151_low_3
Description: NF4151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4151_low_3 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 377; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 43 - 447
Target Start/End: Original strand, 20236357 - 20236761
Alignment:
| Q |
43 |
gatatgataacatgataggaaattaatcgaaccttggtgttccgactgagttgagaatggtgatgatggaaggaatgtaaacagctccccaaattggaac |
142 |
Q |
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| T |
20236357 |
gatatgataacatgatagaaaagtaatcggaccttggtgttccgactgagttgagaatggtgatgatggaaggaatgtaaacagctccccaaattggaac |
20236456 |
T |
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| Q |
143 |
ataaacctcaggaaccaaaattgtgaggggaattacaagacagtagaagaagaaagtgaccatgtgagctacgatcttgcgaacaaggaaaaagctgtat |
242 |
Q |
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| T |
20236457 |
atgaacctcaggaaccaaaattgtgaggggaattacaagacagtagaagaagaaagtgaccatgtgagctacgatcttgcgaacaaggaaaaagctgtat |
20236556 |
T |
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| Q |
243 |
ataacatacacttttttccagaacttcactttctgcacacaaaaaccaaaacagaacatcattaaaattcggaacataaatgaaaatagaattaagtttt |
342 |
Q |
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| T |
20236557 |
ataacatacactttcttccagaacttcactttctgcacacaaaaaccaaaacagaacatcattaaaattcggaacataaatgaaaatagaattaagttct |
20236656 |
T |
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| Q |
343 |
ttgtctctttattcttaatcttaacaaacaaacataccttgttccttataatctccatcgccattttgcggaacagattagcaggaccacacgaccatct |
442 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20236657 |
ttgtctcttcattcttaatcttaacaaacaaacataccttgttccttataatctccatcgccattttgcggaacagattagcaggaccacacgaccatct |
20236756 |
T |
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| Q |
443 |
gtgct |
447 |
Q |
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| T |
20236757 |
gtgct |
20236761 |
T |
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