View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4153_low_9 (Length: 237)
Name: NF4153_low_9
Description: NF4153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4153_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 20 - 222
Target Start/End: Complemental strand, 53699491 - 53699288
Alignment:
| Q |
20 |
tctgccacaaattatcaaagactttctcgaacaacaacagttaataa-tatattgaagcggtcattttatcaatatcctcctaccttgaaagatttattt |
118 |
Q |
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| T |
53699491 |
tctgccacaaattatcaaagactttctcgaacaacaacagttaataaatatattgaagcggtcattttatcaatatcctcctaccttgaaagatttattt |
53699392 |
T |
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| Q |
119 |
gaattggcctattcaagcttatggtggaaagatgtttgaactcatttctttgatttgcatcttttcaatttggcatattcaagcttatggctgaatggtc |
218 |
Q |
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| T |
53699391 |
gaattggcctattcaagcttatggtggaaagatgtttgaactcatttctttgatttgcatcttttcaatttggcatattcaagcttatggctgaatggtc |
53699292 |
T |
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| Q |
219 |
tctg |
222 |
Q |
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|||| |
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| T |
53699291 |
tctg |
53699288 |
T |
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