View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4154_high_49 (Length: 227)
Name: NF4154_high_49
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4154_high_49 |
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Alignment Details
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 43340830 - 43340678
Alignment:
| Q |
60 |
tacatgatattcatattattatagtagtagaagctaatcactctttacaaagcagacacacacagttagaaacataataataacaagaacatgaacatgc |
159 |
Q |
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| T |
43340830 |
tacatgatattcatattattatagtagtagaagctaatcactctttacaaagcagacacacacagttagaaacataataaaaacaagaacatgaacatgc |
43340731 |
T |
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| Q |
160 |
tcaggtatgaatacacaactactttactactcttgtttttgttctgtcctatg |
212 |
Q |
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| T |
43340730 |
tcaggtatgaatacacaaccactttactactcttgtttttgttctgtcctatg |
43340678 |
T |
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