View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4154_low_20 (Length: 336)

Name: NF4154_low_20
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4154_low_20
NF4154_low_20
[»] chr2 (39 HSPs)
chr2 (32-91)||(9392077-9392136)
chr2 (264-321)||(18579234-18579291)
chr2 (264-336)||(4288724-4288797)
chr2 (264-321)||(18719461-18719518)
chr2 (264-321)||(33055958-33056015)
chr2 (264-321)||(37038798-37038855)
chr2 (265-321)||(43480898-43480954)
chr2 (264-322)||(7872804-7872862)
chr2 (264-321)||(38926673-38926731)
chr2 (264-317)||(7028845-7028898)
chr2 (264-336)||(12342160-12342233)
chr2 (264-321)||(19164424-19164481)
chr2 (264-321)||(4658260-4658319)
chr2 (265-321)||(11132619-11132675)
chr2 (278-321)||(29396708-29396751)
chr2 (264-321)||(441259-441317)
chr2 (264-322)||(12566008-12566066)
chr2 (264-335)||(19469591-19469664)
chr2 (264-317)||(7042219-7042272)
chr2 (264-321)||(10195742-10195799)
chr2 (278-335)||(25383499-25383556)
chr2 (211-336)||(12393932-12394053)
chr2 (278-321)||(13562076-13562119)
chr2 (278-321)||(45081928-45081971)
chr2 (264-336)||(8540105-8540178)
chr2 (264-320)||(32228040-32228097)
chr2 (278-321)||(29808894-29808938)
chr2 (278-321)||(1423273-1423316)
chr2 (278-321)||(4133104-4133147)
chr2 (278-317)||(8774135-8774173)
chr2 (278-317)||(8789462-8789500)
chr2 (278-336)||(34546161-34546220)
chr2 (265-336)||(40608619-40608690)
chr2 (264-321)||(27726448-27726503)
chr2 (278-336)||(42743111-42743168)
chr2 (283-321)||(43971575-43971613)
chr2 (264-297)||(11188545-11188578)
chr2 (264-320)||(36106432-36106489)
chr2 (264-316)||(36685774-36685826)
[»] chr4 (47 HSPs)
chr4 (230-336)||(19451222-19451328)
chr4 (264-321)||(47817805-47817863)
chr4 (264-321)||(30261326-30261383)
chr4 (264-321)||(52162171-52162228)
chr4 (264-336)||(53814514-53814587)
chr4 (264-336)||(10573172-10573244)
chr4 (264-335)||(50203141-50203212)
chr4 (278-321)||(54042215-54042258)
chr4 (264-321)||(8971109-8971167)
chr4 (264-336)||(28734665-28734738)
chr4 (264-320)||(25123760-25123816)
chr4 (278-321)||(19878730-19878773)
chr4 (264-322)||(45839704-45839763)
chr4 (278-321)||(49089545-49089588)
chr4 (278-321)||(52957822-52957865)
chr4 (278-321)||(56373607-56373650)
chr4 (211-321)||(56460104-56460210)
chr4 (264-321)||(20448106-20448164)
chr4 (264-321)||(29370671-29370728)
chr4 (264-317)||(37654476-37654530)
chr4 (278-336)||(39984899-39984957)
chr4 (264-321)||(45043620-45043678)
chr4 (216-335)||(49080495-49080608)
chr4 (278-320)||(52848087-52848129)
chr4 (264-336)||(1819629-1819702)
chr4 (264-321)||(11364293-11364350)
chr4 (264-320)||(27653741-27653798)
chr4 (264-336)||(34316289-34316362)
chr4 (280-321)||(41920341-41920382)
chr4 (264-318)||(29519560-29519615)
chr4 (278-317)||(44571901-44571940)
chr4 (262-317)||(44650953-44651008)
chr4 (281-319)||(2728432-2728470)
chr4 (264-336)||(30780037-30780110)
chr4 (264-321)||(47458419-47458475)
chr4 (278-321)||(19930796-19930839)
chr4 (278-321)||(38991793-38991836)
chr4 (278-321)||(42605654-42605697)
chr4 (280-319)||(52253932-52253971)
chr4 (264-335)||(620194-620267)
chr4 (267-317)||(6991299-6991349)
chr4 (264-317)||(34413583-34413637)
chr4 (264-321)||(40345379-40345437)
chr4 (264-320)||(2493169-2493226)
chr4 (264-321)||(41496272-41496329)
chr4 (264-321)||(46392095-46392151)
chr4 (213-321)||(50623106-50623209)
[»] chr8 (31 HSPs)
chr8 (264-321)||(39463326-39463383)
chr8 (264-335)||(45358909-45358980)
chr8 (264-335)||(6374480-6374551)
chr8 (264-335)||(40399892-40399963)
chr8 (264-317)||(13367981-13368034)
chr8 (264-321)||(34156602-34156659)
chr8 (264-321)||(19574454-19574512)
chr8 (264-336)||(9880514-9880587)
chr8 (268-321)||(14234244-14234297)
chr8 (264-321)||(42179162-42179219)
chr8 (241-317)||(15750362-15750435)
chr8 (264-335)||(43561390-43561461)
chr8 (234-321)||(514918-515001)
chr8 (278-336)||(31899261-31899319)
chr8 (264-336)||(15227634-15227709)
chr8 (278-322)||(4989560-4989604)
chr8 (264-321)||(19438303-19438362)
chr8 (274-321)||(34796710-34796756)
chr8 (278-321)||(40228656-40228699)
chr8 (264-321)||(4760587-4760644)
chr8 (264-321)||(29312219-29312279)
chr8 (264-321)||(39698694-39698752)
chr8 (278-336)||(43448798-43448856)
chr8 (270-336)||(43970065-43970131)
chr8 (268-321)||(9812244-9812297)
chr8 (264-336)||(13496302-13496377)
chr8 (278-321)||(17921038-17921082)
chr8 (278-317)||(7839540-7839579)
chr8 (264-321)||(5295434-5295492)
chr8 (264-321)||(43084655-43084713)
chr8 (278-335)||(44713616-44713673)
[»] chr1 (40 HSPs)
chr1 (264-321)||(29567963-29568020)
chr1 (264-336)||(27209056-27209128)
chr1 (264-335)||(25560885-25560956)
chr1 (264-317)||(46554865-46554918)
chr1 (264-336)||(26595081-26595153)
chr1 (264-321)||(49468737-49468795)
chr1 (264-336)||(9915510-9915583)
chr1 (264-321)||(31699316-31699373)
chr1 (264-335)||(10842847-10842919)
chr1 (264-336)||(18794554-18794626)
chr1 (264-321)||(15823101-15823159)
chr1 (264-321)||(48025280-48025338)
chr1 (265-321)||(5463643-5463700)
chr1 (264-321)||(8989666-8989723)
chr1 (230-336)||(46046013-46046113)
chr1 (264-336)||(8895027-8895099)
chr1 (213-321)||(24611545-24611648)
chr1 (264-315)||(26755286-26755338)
chr1 (264-335)||(31491782-31491854)
chr1 (278-317)||(25151891-25151930)
chr1 (278-321)||(32806964-32807007)
chr1 (278-321)||(46271050-46271093)
chr1 (265-321)||(31798657-31798715)
chr1 (264-321)||(48009077-48009135)
chr1 (264-305)||(39477751-39477792)
chr1 (277-336)||(9092673-9092731)
chr1 (282-321)||(34110613-34110652)
chr1 (278-321)||(52125162-52125205)
chr1 (264-317)||(2610863-2610914)
chr1 (264-321)||(46286844-46286902)
chr1 (264-317)||(49900787-49900841)
chr1 (267-322)||(51244861-51244918)
chr1 (264-305)||(5046-5087)
chr1 (230-263)||(24884455-24884488)
chr1 (265-317)||(28538272-28538325)
chr1 (264-321)||(44108666-44108726)
chr1 (281-317)||(5225856-5225892)
chr1 (211-263)||(14373491-14373543)
chr1 (264-300)||(16757242-16757278)
chr1 (278-318)||(43759414-43759454)
[»] chr6 (24 HSPs)
chr6 (264-336)||(16128020-16128092)
chr6 (264-335)||(10540490-10540562)
chr6 (264-334)||(24163729-24163800)
chr6 (264-321)||(1502781-1502838)
chr6 (264-321)||(32193769-32193826)
chr6 (264-319)||(12459349-12459404)
chr6 (264-321)||(234101-234159)
chr6 (264-321)||(3988772-3988829)
chr6 (264-321)||(9940715-9940772)
chr6 (264-317)||(12322919-12322972)
chr6 (265-321)||(17552275-17552332)
chr6 (264-321)||(17828350-17828407)
chr6 (264-321)||(577128-577186)
chr6 (264-321)||(1134992-1135050)
chr6 (264-335)||(13011362-13011430)
chr6 (271-336)||(20226234-20226299)
chr6 (271-336)||(22120218-22120283)
chr6 (264-336)||(29713419-29713492)
chr6 (266-336)||(21271416-21271485)
chr6 (278-336)||(23259338-23259396)
chr6 (264-336)||(31443458-31443531)
chr6 (264-321)||(13503871-13503932)
chr6 (290-335)||(32619839-32619884)
chr6 (264-307)||(17246678-17246722)
[»] chr7 (34 HSPs)
chr7 (264-321)||(29636253-29636310)
chr7 (264-321)||(21819350-21819407)
chr7 (264-336)||(31418524-31418597)
chr7 (264-321)||(40753456-40753512)
chr7 (211-335)||(42879946-42880064)
chr7 (264-322)||(24133156-24133214)
chr7 (264-321)||(28289281-28289339)
chr7 (264-321)||(35777886-35777944)
chr7 (264-317)||(1031222-1031275)
chr7 (265-322)||(8293094-8293151)
chr7 (264-336)||(37815791-37815864)
chr7 (264-336)||(7759327-7759399)
chr7 (264-308)||(8604042-8604086)
chr7 (264-336)||(10476203-10476275)
chr7 (278-321)||(22298078-22298121)
chr7 (267-321)||(48843622-48843677)
chr7 (264-321)||(1742058-1742116)
chr7 (264-322)||(30312525-30312583)
chr7 (264-321)||(40339525-40339583)
chr7 (283-336)||(24680215-24680268)
chr7 (281-322)||(27935852-27935893)
chr7 (211-336)||(19105013-19105131)
chr7 (264-322)||(4268679-4268737)
chr7 (264-321)||(13405153-13405211)
chr7 (278-336)||(27947512-27947570)
chr7 (264-317)||(33939764-33939818)
chr7 (264-321)||(45948656-45948714)
chr7 (264-321)||(21752138-21752195)
chr7 (264-321)||(47461401-47461457)
chr7 (264-322)||(48684790-48684849)
chr7 (264-321)||(23935488-23935546)
chr7 (284-322)||(25055869-25055907)
chr7 (264-310)||(31196637-31196683)
chr7 (211-263)||(6563492-6563544)
[»] chr5 (37 HSPs)
chr5 (264-317)||(14161933-14161986)
chr5 (264-327)||(4425041-4425105)
chr5 (265-321)||(11977656-11977712)
chr5 (264-336)||(36164954-36165026)
chr5 (264-335)||(21634179-21634249)
chr5 (264-335)||(21642426-21642496)
chr5 (264-321)||(34446055-34446113)
chr5 (278-335)||(3306023-3306080)
chr5 (264-317)||(15167044-15167097)
chr5 (264-321)||(34534426-34534483)
chr5 (264-336)||(42661953-42662026)
chr5 (265-321)||(7748926-7748982)
chr5 (278-321)||(2729814-2729857)
chr5 (274-336)||(7736451-7736513)
chr5 (264-321)||(14005959-14006017)
chr5 (278-336)||(39566265-39566323)
chr5 (264-321)||(39730013-39730071)
chr5 (278-335)||(14620508-14620565)
chr5 (264-320)||(42104092-42104149)
chr5 (234-321)||(34382108-34382195)
chr5 (264-322)||(1309386-1309444)
chr5 (264-336)||(6519043-6519117)
chr5 (265-335)||(28591641-28591711)
chr5 (286-336)||(34972663-34972713)
chr5 (264-318)||(38369939-38369993)
chr5 (264-321)||(42978101-42978159)
chr5 (264-321)||(843085-843142)
chr5 (274-321)||(4911143-4911191)
chr5 (264-336)||(7721162-7721234)
chr5 (267-321)||(27797851-27797902)
chr5 (264-321)||(39335231-39335290)
chr5 (264-321)||(41645307-41645360)
chr5 (265-310)||(24281164-24281209)
chr5 (265-310)||(24381002-24381047)
chr5 (264-307)||(13761624-13761668)
chr5 (264-300)||(27557865-27557901)
chr5 (265-317)||(38362170-38362222)
[»] chr3 (31 HSPs)
chr3 (264-336)||(38141017-38141089)
chr3 (264-335)||(40487895-40487966)
chr3 (264-321)||(30934835-30934892)
chr3 (264-336)||(38016441-38016514)
chr3 (264-336)||(36844753-36844825)
chr3 (264-321)||(30315376-30315434)
chr3 (264-321)||(9189461-9189518)
chr3 (264-321)||(19373653-19373710)
chr3 (278-321)||(38363873-38363916)
chr3 (264-321)||(23525341-23525399)
chr3 (264-321)||(45213747-45213805)
chr3 (213-336)||(51398033-51398150)
chr3 (264-320)||(30431187-30431244)
chr3 (278-335)||(33194042-33194099)
chr3 (264-321)||(48901787-48901844)
chr3 (264-321)||(48903353-48903410)
chr3 (278-317)||(35557787-35557826)
chr3 (278-321)||(39359002-39359045)
chr3 (264-335)||(42072052-42072123)
chr3 (278-321)||(44676303-44676346)
chr3 (278-336)||(11393627-11393685)
chr3 (264-321)||(31853587-31853645)
chr3 (264-321)||(47895369-47895427)
chr3 (264-321)||(50088341-50088399)
chr3 (264-317)||(22857157-22857210)
chr3 (278-321)||(36729835-36729878)
chr3 (264-316)||(2458074-2458128)
chr3 (274-336)||(8817218-8817280)
chr3 (278-336)||(32492192-32492249)
chr3 (264-322)||(50346692-50346750)
chr3 (281-321)||(36460891-36460930)
[»] scaffold0502 (1 HSPs)
scaffold0502 (264-335)||(586-657)
[»] scaffold0294 (1 HSPs)
scaffold0294 (264-321)||(3532-3590)
[»] scaffold0026 (1 HSPs)
scaffold0026 (264-333)||(4208-4277)
[»] scaffold0565 (2 HSPs)
scaffold0565 (264-335)||(9969-10040)
scaffold0565 (264-320)||(9671-9727)
[»] scaffold0136 (1 HSPs)
scaffold0136 (264-321)||(9611-9669)
[»] scaffold0110 (1 HSPs)
scaffold0110 (264-321)||(24768-24826)
[»] scaffold0182 (1 HSPs)
scaffold0182 (264-321)||(18283-18340)
[»] scaffold0300 (1 HSPs)
scaffold0300 (264-336)||(4632-4704)
[»] scaffold0983 (1 HSPs)
scaffold0983 (265-319)||(717-771)


Alignment Details
Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 9392136 - 9392077
Alignment:
Q  32 tctcttgatatattttatcttgtctttcgattaacaagatataattagtcatttatacaa 91  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9392136 tctcttgatatattttatcttgtcgttcgattaacaagatataattagtcatttatacaa 9392077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 18579234 - 18579291
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  18579234 caattaatactatatacactacttccaaagtataattttttctttaatgaaaaacaaa 18579291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 4288797 - 4288724
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  4288797 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattag 4288724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 18719518 - 18719461
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||    
T  18719518 caattaatactatatacactattttcaaagtattattttttctttaatgaaaaacaaa 18719461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 33055958 - 33056015
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  33055958 caattaatactatatacactactttcaatgtattattttttctttaatgaaaaacaaa 33056015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 37038855 - 37038798
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||    
T  37038855 caattaatattatatacactactttcaaagtattattttttctttaatgaaaaacaaa 37038798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 43480954 - 43480898
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  43480954 aattaatactttatacacaacttccaaagtattattttttctttaatgaaaaacaaa 43480898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 7872862 - 7872804
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||||||||| | ||||||| |||||||||||| |||||||||||||||||||||    
T  7872862 caattaatactataaatactactttcaaagtattattttttctttaatgaaaaacaaat 7872804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 38926673 - 38926731
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  38926673 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaa 38926731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 7028898 - 7028845
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| |||||    
T  7028898 caattaatactatatacactactttcaaagtattattttttctttaataaaaaa 7028845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 12342160 - 12342233
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||||  ||| ||||||||    
T  12342160 caattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaatcaatagttgattag 12342233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 19164424 - 19164481
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||||    
T  19164424 caattaatattatatacactactttcaaagtattattttttctttaatgaataacaaa 19164481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 4658319 - 4658260
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta--ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||| ||||||||||  || ||||||||||||||||||||    
T  4658319 caattaatactatatacactactttcaaagtattaatttttttctttaatgaaaaacaaa 4658260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 11132619 - 11132675
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||| ||||| |||| ||||||| ||||||||||||||||||||    
T  11132619 aattaatactatatacattactttcaaaatattattttttctttaatgaaaaacaaa 11132675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 29396751 - 29396708
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  29396751 tacactacttccaaagtattattttttctttaatgaaaaacaaa 29396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 441317 - 441259
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||| ||||||||||||||||| ||||||||||||||||||||    
T  441317 caattaatactatgttacaccacttccaaagtattattttttctttaatgaaaaacaaa 441259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 12566066 - 12566008
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    ||||||||| |||||||||| |||||||||||| ||| | |||||||||||||||||||    
T  12566066 caattaatattatatacactgcttccaaagtataattttgtctttaatgaaaaacaaat 12566008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 19469591 - 19469664
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattattt--ctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| |||||||| || ||||||||||||||| |||  ||||||||||||||||||  |||||||||||    
T  19469591 caattaatattatatacattagttccaaagtattattttttttctttaatgaaaaacaaatcaataattgatta 19469664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 7042272 - 7042219
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||||||||||||||||| ||||||||| || |||||||||| |||||    
T  7042272 caattaatactatatacactactttcaaagtattcttttttctttaataaaaaa 7042219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 10195742 - 10195799
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||  ||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  10195742 caattaatgatatatacactacttccaaaatattattttttctttaataaaaaacaaa 10195799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 25383556 - 25383499
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||||||| |||||||||| |||||||||||||||||||||||  ||| |||||||    
T  25383556 tacactactttcaaagtattactatttctttaatgaaaaacaaatcaatagttgatta 25383499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 211 - 336
Target Start/End: Complemental strand, 12394053 - 12393932
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaa 310  Q
    ||||||| ||||| || | |||||||||||||| |||| | ||||||||||||    || ||   ||||||||| || ||||||| |||| |||||||||    
T  12394053 tcagtttctaatgcaataataactttttatttttaattgtacccttcaattaa----tattatgttatacactattttcaaagtaatattttttctttaa 12393958  T
Q  311 tgaaaaacaaattgataattgattag 336  Q
    ||||||||||| | ||| ||||||||    
T  12393957 tgaaaaacaaactaatagttgattag 12393932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 13562076 - 13562119
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||    
T  13562076 tacactacttccaaagtattattttttatttaatgaaaaacaaa 13562119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 45081971 - 45081928
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||| |||||| ||||||||||||||||||||    
T  45081971 tacactacttccaaagcattattttttctttaatgaaaaacaaa 45081928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 8540105 - 8540178
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattattt-ctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| ||| ||||||||||| ||| ||||||| ||| ||||||||||||||||| | ||| ||||||||    
T  8540105 caattaatattatttacactacttctaaaatattatttttttctttaatgaaaaacaaactaatagttgattag 8540178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 32228097 - 32228040
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | ||| ||||| |||||||||||| |||||||||||||||||||    
T  32228097 caattaatactatgttacaatactttcaaagtattattttttctttaatgaaaaacaa 32228040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 29808894 - 29808938
Alignment:
Q  278 tacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  29808894 tacactacttccaaagtattatttttttctttaatgaaaaacaaa 29808938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 1423273 - 1423316
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| ||||||| |||||||||||| |||||||    
T  1423273 tacactacttccaaaatattattttttctttaatgagaaacaaa 1423316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 4133104 - 4133147
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| |||| |||| ||||||||||    
T  4133104 tacactacttccaaagtattattttttccttaaagaaaaacaaa 4133147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 8774135 - 8774173
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8774135 tacactacttccaaagtattatt-tttctttaatgaaaaa 8774173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 8789500 - 8789462
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  8789500 tacactacttccaaagtattatt-tttctttaatgaaaaa 8789462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 34546220 - 34546161
Alignment:
Q  278 tacactacttccaaagtattattattt-ctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||| |||||| ||| ||||||||||||||||||  ||| ||||||||    
T  34546220 tacactacttccaaaggattatttttttctttaatgaaaaacaaatcaatagttgattag 34546161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 265 - 336
Target Start/End: Complemental strand, 40608690 - 40608619
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||  |||||||||||||   ||| ||||||| |||||||||||||||||||| | ||| ||||||||    
T  40608690 aattaatcttatatacactactattaaaatattattttttctttaatgaaaaacaaacttatagttgattag 40608619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 27726503 - 27726448
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| |||||||| |||||||||| ||||||| |||  |||||||||||||||    
T  27726503 caattaatagtatatacattacttccaaattattatttttt--ttaatgaaaaacaaa 27726448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 42743111 - 42743168
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||  ||||||||||||    
T  42743111 tacactactttcaaagtattttt-tttctttaataaaaaacaaatcaataattgattag 42743168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 321
Target Start/End: Original strand, 43971575 - 43971613
Alignment:
Q  283 tacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||| ||||||||||| ||||||||||||||||||||    
T  43971575 tacttctaaagtattattttttctttaatgaaaaacaaa 43971613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 11188578 - 11188545
Alignment:
Q  264 caattaatactatatacactacttccaaagtatt 297  Q
    |||||||| |||||||||||||||||||||||||    
T  11188578 caattaatcctatatacactacttccaaagtatt 11188545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 36106489 - 36106432
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | ||||||||||||| |||||||| ||| |||||| ||||||||    
T  36106489 caattaatactatgttacactacttccaatgtattattttttttttaataaaaaacaa 36106432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 36685826 - 36685774
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaa 316  Q
    |||||||||||||| |||||||||  ||| ||||||| ||||||| |||||||    
T  36685826 caattaatactataaacactactttgaaaatattattttttctttgatgaaaa 36685774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 230 - 336
Target Start/End: Complemental strand, 19451328 - 19451222
Alignment:
Q  230 taactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataat 329  Q
    ||||||||| ||||||||| | |||||||||||| |    ||| ||||||||||||||||||||||||||| ||||||||||||||||||||   |||||    
T  19451328 taactttttcttttcaattgtacccttcaattaataccatatagtatatacactacttccaaagtattattttttctttaatgaaaaacaaaccaataat 19451229  T
Q  330 tgattag 336  Q
    |||||||    
T  19451228 tgattag 19451222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 47817805 - 47817863
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  47817805 caattaatactatatacactacttccaaagtattatttttttctttaatgaaaaacaaa 47817863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 30261326 - 30261383
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||    
T  30261326 caattaatactatatacattactttcaaagtattattttttctttaatgaaaaacaaa 30261383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 52162171 - 52162228
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  52162171 caattaatactaaatacactagttccaaagtattattttttctttaatgaaaaacaaa 52162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 53814587 - 53814514
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||  ||||||||||||    
T  53814587 caattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaataattgattag 53814514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 10573244 - 10573172
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||||| |||||||||||||||||| |||| |||||||||| |||||  ||| ||||||||    
T  10573244 caattaatactatatacaatacttccaaagtattattttttcattaatgaaaatcaaatcaatagttgattag 10573172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 50203141 - 50203212
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| |||||||| |||||| ||||||||||| |||||||||||||||||||||  ||| |||||||    
T  50203141 caattaatattatatacattacttcaaaagtattattttttctttaatgaaaaacaaatcaatagttgatta 50203212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 54042258 - 54042215
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54042258 tacactacttccaaagtattattatttctttaatgaaaaacaaa 54042215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 8971109 - 8971167
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  8971109 caattaataatatatacactacttccaaagtattatttttttctttaatgaaaaacaaa 8971167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 28734665 - 28734738
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||   ||||||||||||    
T  28734665 caattaatactatgttacactacttgcaaagtattattttttctttaatgaaaaacaaaccaataattgattag 28734738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 25123816 - 25123760
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||||| |||||||||    
T  25123816 caattaatactatatacacgacttccaaaatattattttttctttaaagaaaaacaa 25123760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 19878730 - 19878773
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  19878730 tacactacttccaaagtattattttttctttaatgaaaaacaaa 19878773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 45839704 - 45839763
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaat 322  Q
    ||||||||| |||||||| |||||||||||||||| || |||||||||||||||||||||    
T  45839704 caattaatattatatacattacttccaaagtattatttttttctttaatgaaaaacaaat 45839763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 49089545 - 49089588
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  49089545 tacactacttccaaagtattattttttctttaatgaaaaacaaa 49089588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 52957865 - 52957822
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  52957865 tacactacttccaaagtattattttttctttaatgaaaaacaaa 52957822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 56373650 - 56373607
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  56373650 tacactacttccaaagtattattttttctttaatgaaaaacaaa 56373607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 321
Target Start/End: Original strand, 56460104 - 56460210
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttc-ttta 309  Q
    |||| ||| |||| || ||||||||||| |||| ||||||  ||||||||||     ||||| ||||||||||||||||||| ||||||| |||| ||||    
T  56460104 tcagctttcaatgcaatagtaactttttctttttaattatatccttcaatta-----taatattatatacactacttccaaaatattattttttctttta 56460198  T
Q  310 atgaaaaacaaa 321  Q
    ||||||||||||    
T  56460199 atgaaaaacaaa 56460210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 20448106 - 20448164
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||    
T  20448106 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaatcaaa 20448164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 29370671 - 29370728
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||    
T  29370671 caattaatactaaattacactacttccaaagtattatt-tttctttaatgaaaaacaaa 29370728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 37654476 - 37654530
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  37654476 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaa 37654530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 39984899 - 39984957
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||  ||| ||||||||    
T  39984899 tacactacttccaaagtataattgtttctttaatgaaaaacaaatcaatagttgattag 39984957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 45043678 - 45043620
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||    
T  45043678 caattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaa 45043620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 335
Target Start/End: Complemental strand, 49080608 - 49080495
Alignment:
Q  216 ttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaatgaaa 315  Q
    |||||||| || | ||||||||||||||||||| | |||||||||||| | |||    | | |||||||||||| |||||||||| ||||||||||||||    
T  49080608 ttttaatgcaataataactttttattttcaattgtacccttcaattaata-tta----tgt-tacactacttccgaagtattattttttctttaatgaaa 49080515  T
Q  316 aacaaattgataattgatta 335  Q
    |||||||  ||| |||||||    
T  49080514 aacaaatcaatagttgatta 49080495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 52848129 - 52848087
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  52848129 tacactacttccaaagtattattttttctttaatgaaaaacaa 52848087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 1819629 - 1819702
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||||||||| ||||  ||| ||||||||    
T  1819629 caattaatactatgttacactactttcaaagtattattttttctttaatgaaaaataaatcaatagttgattag 1819702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 11364293 - 11364350
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| |||||| |||||||||||||||||||| | |||| |||||||||||||    
T  11364293 caattaatattatatatactacttccaaagtattattttctcttcaatgaaaaacaaa 11364350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 27653741 - 27653798
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||    
T  27653741 caattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaa 27653798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 34316289 - 34316362
Alignment:
Q  264 caattaatactatata-cactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| |||||  |||||||||||||| |||||| |||||||||||||||||||||  ||| ||||||||    
T  34316289 caattaatattatattgcactacttccaaaggattattctttctttaatgaaaaacaaatcaatagttgattag 34316362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 321
Target Start/End: Complemental strand, 41920382 - 41920341
Alignment:
Q  280 cactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  41920382 cactacttccaaagtattattttttctttaatgaaaaacaaa 41920341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 29519615 - 29519560
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaac 318  Q
    ||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||    
T  29519615 caattaatactatgttacactacttctaaagtattattttttctttaatgaaaaac 29519560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 44571940 - 44571901
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  44571940 tacactacttccaaagtattattttttctttaatgaaaaa 44571901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 317
Target Start/End: Original strand, 44650953 - 44651008
Alignment:
Q  262 aacaattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||||||||||||||||||| |||| ||||||  | ||||||||||||||    
T  44650953 aacaattaatactatatacactactttcaaaatattatattgtctttaatgaaaaa 44651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 281 - 319
Target Start/End: Complemental strand, 2728470 - 2728432
Alignment:
Q  281 actacttccaaagtattattatttctttaatgaaaaaca 319  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  2728470 actacttccaaagtattattttttctttaatgaaaaaca 2728432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 30780110 - 30780037
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattattt-ctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| |||| | ||||||| |||||||||||| ||| ||||||||||||||||||  ||| ||||||||    
T  30780110 caattaatattataaagactactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattag 30780037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 47458475 - 47458419
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||| |||||  ||||||||||| ||||||||| ||||||||||    
T  47458475 caattaatactatatacattacttttaaagtattatt-tttctttaacgaaaaacaaa 47458419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 19930796 - 19930839
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| ||||||| || |||||||||||||||||    
T  19930796 tacactacttccaaaatattatttttcctttaatgaaaaacaaa 19930839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 38991836 - 38991793
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||| |||||||||||| |||||| |||||||||||||    
T  38991836 tacactactttcaaagtattattttttcttgaatgaaaaacaaa 38991793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 42605654 - 42605697
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||| ||||| |||||||||||| ||||||||||||||||||||    
T  42605654 tacattactttcaaagtattattttttctttaatgaaaaacaaa 42605697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 52253932 - 52253971
Alignment:
Q  280 cactacttccaaagtattattatttctttaatgaaaaaca 319  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  52253932 cactacttccaaggtattattttttctttaatgaaaaaca 52253971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 620267 - 620194
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattattt--ctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||| |||||| |||||||||||||||||| |||   ||||| |||||||||||  ||| |||||||    
T  620267 caattaatactctatacattacttccaaagtattatttttttcttttaaagaaaaacaaatcaatagttgatta 620194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Complemental strand, 6991349 - 6991299
Alignment:
Q  267 ttaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||| ||||||||||| || |||||||||||| |||||||||| |||||    
T  6991349 ttaatattatatacactattttcaaagtattattttttctttaataaaaaa 6991299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 34413637 - 34413583
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaa 317  Q
    ||||||||| ||||||||||||||| ||| ||||| || ||||||||||||||||    
T  34413637 caattaatattatatacactacttctaaaatattatttttttctttaatgaaaaa 34413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 40345437 - 40345379
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||||||||||||| |  |||||||||| |||||||||    
T  40345437 caattaatactatgttacactacttccaaagtattgtattttctttaataaaaaacaaa 40345379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 2493169 - 2493226
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | ||| ||||||||| |||||||  |||||||||||||||||||    
T  2493169 caattaatactatgttacattacttccaaggtattatcttttctttaatgaaaaacaa 2493226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 41496272 - 41496329
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||||||||||||| ||||| |||||||  ||||| ||| |||||||||    
T  41496272 caattaatattatatacactactcccaaaatattatttattcttcaataaaaaacaaa 41496329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 46392151 - 46392095
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||| ||||||||||||||||||||||| ||| ||||||  ||||||||    
T  46392151 caattaata-tatttacactacttccaaagtattattttttatttaatagaaaacaaa 46392095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 321
Target Start/End: Original strand, 50623106 - 50623209
Alignment:
Q  213 agtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattattt-ctttaat 311  Q
    |||||| |||| || | ||||||||| ||||||||||| |||||||||||| |     || | | ||||||||||| ||||||||||| ||| |||||||    
T  50623106 agttttcaatgcaataataactttttcttttcaattatacccttcaattaata-----taatgt-tacactacttctaaagtattatttttttctttaat 50623199  T
Q  312 gaaaaacaaa 321  Q
    ||||||||||    
T  50623200 gaaaaacaaa 50623209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 39463326 - 39463383
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39463326 caattaatactatatacactacttccaaagtattattttttctttaatgaaaaacaaa 39463383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 45358980 - 45358909
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| | ||| |||||||    
T  45358980 caattaatattatatacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgatta 45358909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 6374480 - 6374551
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| | ||| |||||||    
T  6374480 caattaatattatatacattacttccaaagtattattttttctttaatgaaaaacaaactaatagttgatta 6374551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 40399963 - 40399892
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| | ||| |||||||    
T  40399963 caattaatattatatacactactttcaaagtattattttttctttaatgaaaaacaaactaatagttgatta 40399892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 13368034 - 13367981
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  13368034 caattaatattatatacactacttccaaagtattattttttctttaatgaaaaa 13367981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 34156602 - 34156659
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  34156602 caattaatactatgtacactacttccaaaatattattttttctttaatgaaaaacaaa 34156659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 19574454 - 19574512
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  19574454 caattaatactatattacactacttccaaaatattattttttctttaatgaaaaacaaa 19574512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 9880587 - 9880514
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||  ||| ||||||||    
T  9880587 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaataaatcaatagttgattag 9880514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 14234297 - 14234244
Alignment:
Q  268 taatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||    
T  14234297 taatactatatacactacttccaaaatattattttttctttaacgaaaaacaaa 14234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 42179162 - 42179219
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||||||||||||||||||    
T  42179162 caattaatactatatacactattttaaaagtattattttttctttaatgaaaaacaaa 42179219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 317
Target Start/End: Complemental strand, 15750435 - 15750362
Alignment:
Q  241 tttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaa 317  Q
    |||||||| | ||||||||||||    ||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15750435 tttcaattgtacccttcaattaa----taatactatatacactacttccaaagtattatttttttctttaatgaaaaa 15750362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 43561390 - 43561461
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||||||| |||||  |||||| |||||||||||| |||||||||||||||| ||||| || ||||||||    
T  43561390 caattaataccatatattctactttcaaagtattattttttctttaatgaaaaataaattaatgattgatta 43561461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 514918 - 515001
Alignment:
Q  234 tttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||| ||||||||| |  |||||||||||    |||||||||||||||||||||| |||||||||  ||||| ||||||||||||||    
T  514918 tttttcttttcaattgtatccttcaattaa----taatactatatacactacttccgaagtattatattttctataatgaaaaacaaa 515001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 31899319 - 31899261
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||    
T  31899319 tacactacttccaaagtattatcttttctttaatgaaaaacaaatcaatagttgattag 31899261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 15227634 - 15227709
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta---ttatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||| |||| ||||||||||   || |||||||||||||||||||| | || |||||||||    
T  15227634 caattaatactatatacacaactttcaaagtattatttttttttctttaatgaaaaacaaactaatgattgattag 15227709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 322
Target Start/End: Original strand, 4989560 - 4989604
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||||| |||||||||||| |||||||||||||||||||||    
T  4989560 tacactacttacaaagtattattttttctttaatgaaaaacaaat 4989604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 19438303 - 19438362
Alignment:
Q  264 caattaatactatat-acactacttccaaagtatt-attatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||    
T  19438303 caattaatactatattacactacttccaaaatatttattttttctttaatgaaaaacaaa 19438362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 34796756 - 34796710
Alignment:
Q  274 tatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  34796756 tatatacactacttccaaagtattatt-tttttttaatgaaaaacaaa 34796710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 40228656 - 40228699
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||| |||||||||||||||||| ||||||||||||||||||||    
T  40228656 tacattacttccaaagtattattttttctttaatgaaaaacaaa 40228699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 4760644 - 4760587
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||    
T  4760644 caattaatactatgttacactactttcaaagtattatt-tttctttaatgaaaaacaaa 4760587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 29312279 - 29312219
Alignment:
Q  264 caattaatactatatacactacttccaa---agtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||||  |   ||||||||| ||||||||||||||||||||    
T  29312279 caattaatactatatacactacttcagaagtagtattattttttctttaatgaaaaacaaa 29312219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 39698752 - 39698694
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||| |||||||||| ||||||| ||||||||||||||||||||    
T  39698752 caattaatactatgttacattacttccaaaatattattttttctttaatgaaaaacaaa 39698694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 43448798 - 43448856
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||| ||||| |||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  43448798 tacattactttcaaagtattattttttctttaatgaaaaacaaactaatagttgattag 43448856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 43970131 - 43970065
Alignment:
Q  270 atactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||| |||||| ||||||||||| |||||||||| ||| ||||||  ||| ||||||||    
T  43970131 atactatatacattacttctaaagtattattttttctttaataaaagacaaatcaatagttgattag 43970065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 9812244 - 9812297
Alignment:
Q  268 taatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||| |||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  9812244 taatattatatacactactttcaaagtacaattttttctttaatgaaaaacaaa 9812297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 13496302 - 13496377
Alignment:
Q  264 caattaatactatatacactacttccaa---agtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||| ||||||||||||||||   ||||||||| |||||| || ||||||||||   ||||||||||||    
T  13496302 caattaatactgtatacactacttccaaagtagtattattttttcttgaaagaaaaacaaaccaataattgattag 13496377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 17921038 - 17921082
Alignment:
Q  278 tacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| || ||||||||||||||||||||    
T  17921038 tacactacttccaaagtattatttttttctttaatgaaaaacaaa 17921082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 7839540 - 7839579
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  7839540 tacactacttccaaaatattattttttctttaatgaaaaa 7839579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 5295492 - 5295434
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||||||||||||||||||| ||||| || |||| ||||| |||||||||    
T  5295492 caattaatattatatacactacttccaaaatattatttttttcattaataaaaaacaaa 5295434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 43084713 - 43084655
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||||||||  |||||| |||||||||||||| |||||    
T  43084713 caattaatactatgttacactacttccaaaaaattattttttctttaatgaaacacaaa 43084655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 335
Target Start/End: Original strand, 44713616 - 44713673
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||||||| |||| ||||||| |||||||||||||||| ||| | ||| |||||||    
T  44713616 tacactactttcaaaatattattttttctttaatgaaaaataaactaatagttgatta 44713673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 6e-22; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 29567963 - 29568020
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29567963 caattaatactatatacactacttccaaagtattattttttctttaatgaaaaacaaa 29568020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 27209056 - 27209128
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||| ||||||||    
T  27209056 caattaatattatatacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattag 27209128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 25560956 - 25560885
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | ||| |||||||    
T  25560956 caattaatactatatacactacttccaaaatattattttttctttaatgaaaaacaaactaatagttgatta 25560885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 46554865 - 46554918
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  46554865 caattaatactatatacactacttccaaagtattattttttctttaataaaaaa 46554918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 26595153 - 26595081
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||| |||||||| |||| | ||||||||||||||||||||   ||||||||||||    
T  26595153 caattaatactatatacactatttccaaagaattaatttttctttaatgaaaaacaaaccaataattgattag 26595081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 49468795 - 49468737
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  49468795 caattaatactatattacactacttccaaaggattattttttctttaatgaaaaacaaa 49468737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 9915510 - 9915583
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||  ||| ||||||||    
T  9915510 caattaatactatgttacactacttgcaaagtattattttttctttaatgaaaaacaaatcaatagttgattag 9915583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 31699373 - 31699316
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||    
T  31699373 caattaatactataaacattacttccaaaatattattttttctttaatgaaaaacaaa 31699316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 10842847 - 10842919
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||| | ||| |||||||    
T  10842847 caattaatactatgttacagtacttccaaagtattattttttctttaatgaaaaacaaactaatagttgatta 10842919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 18794626 - 18794554
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| ||||||||||||||||||| |||| || ||||||||||| |||||||| | ||| ||||||||    
T  18794626 caattaatattatatacactacttccaaaatattcttttttctttaatggaaaacaaactaatagttgattag 18794554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 15823101 - 15823159
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||    
T  15823101 caattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaa 15823159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 48025338 - 48025280
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||    
T  48025338 caattaatactatgttacactacttccaaagtattattttttctttaaagaaaaacaaa 48025280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 5463643 - 5463700
Alignment:
Q  265 aattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||    
T  5463643 aattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaa 5463700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 8989723 - 8989666
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||| |||||||||| | |||| ||||||| ||||||||||||||||||||    
T  8989723 caattaatactctatacactacattcaaaatattattttttctttaatgaaaaacaaa 8989666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 46046013 - 46046113
Alignment:
Q  230 taactttttattttcaattatgcccttcaattaacaattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataa 328  Q
    ||||||||||||||||||||| |||||| |||||       |||||| | ||||||||| ||||||||||||  |||||||||||||| |||||| |||     
T  46046013 taactttttattttcaattatacccttcgattaa-------tactatgttacactactttcaaagtattatttattctttaatgaaaatcaaattaatag 46046105  T
Q  329 ttgattag 336  Q
    ||||||||    
T  46046106 ttgattag 46046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 8895099 - 8895027
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| ||||||||||| || |||| ||||||| ||| |||||||||||||||||  ||| ||||||||    
T  8895099 caattaatattatatacactattttcaaaatattattttttttttaatgaaaaacaaatcaatagttgattag 8895027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 321
Target Start/End: Complemental strand, 24611648 - 24611545
Alignment:
Q  213 agtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatat-acactacttccaaagtatta-ttatttctttaa 310  Q
    ||||| |||||||| | ||||||||| ||||||||| | ||||||||||||       |||||| | |||||||||||||||||||| || |||||||||    
T  24611648 agtttctaatgtaataataactttttcttttcaattgtacccttcaattaa-------tactatgttacactacttccaaagtattatttttttctttaa 24611556  T
Q  311 tgaaaaacaaa 321  Q
    |||||||||||    
T  24611555 tgaaaaacaaa 24611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 315
Target Start/End: Original strand, 26755286 - 26755338
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaa 315  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  26755286 caattaatactatgtcacactacttccaaagtattattttttctttaatgaaa 26755338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 31491854 - 31491782
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||| | ||||||||| |||||||| ||| |||||||||||||||||||||  ||| |||||||    
T  31491854 caattaatactatgttacactactttcaaagtataattttttctttaatgaaaaacaaatcaatagttgatta 31491782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 317
Target Start/End: Original strand, 25151891 - 25151930
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25151891 tacactacttccaaagtattattttttctttaatgaaaaa 25151930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 32807007 - 32806964
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  32807007 tacactactttcaaagtattattttttctttaatgaaaaacaaa 32806964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 46271093 - 46271050
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  46271093 tacacaacttccaaagtattattttttctttaatgaaaaacaaa 46271050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 31798657 - 31798715
Alignment:
Q  265 aattaatactatat-acactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||| | |||||||||||||||||||| || ||||||||||||||||||||    
T  31798657 aattaatactatgttacactacttccaaagtattatttttttctttaatgaaaaacaaa 31798715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 48009077 - 48009135
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||| |||||||||||||||| |||||||| |||||||||||    
T  48009077 caattaatactatgttacactgcttccaaagtattattttttctttattgaaaaacaaa 48009135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 39477792 - 39477751
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttc 305  Q
    |||||||||||||||||||||||||| |||||||||| ||||    
T  39477792 caattaatactatatacactacttcctaagtattattttttc 39477751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 336
Target Start/End: Original strand, 9092673 - 9092731
Alignment:
Q  277 atacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||| |||||||| || |||||||||||||||||||||  ||| ||||||||    
T  9092673 atacactacttcaaaagtattttt-tttctttaatgaaaaacaaatcaatatttgattag 9092731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 34110613 - 34110652
Alignment:
Q  282 ctacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  34110613 ctactttcaaagtattattttttctttaatgaaaaacaaa 34110652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 52125205 - 52125162
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||||    
T  52125205 tacactacttccatagtattattttttgtttaatgaaaaacaaa 52125162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 2610914 - 2610863
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||| | ||||||||||||||||||||||||  ||| ||||||||||||    
T  2610914 caattaatattctatacactacttccaaagtattat--tttttttaatgaaaaa 2610863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 46286902 - 46286844
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| |||||| ||  ||||||| ||| ||||||||||||||||||||    
T  46286902 caattaatactatattacactatttttaaagtatcattttttctttaatgaaaaacaaa 46286844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 49900841 - 49900787
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaa 317  Q
    ||||||||| |||||||||||||| |||||||||| || ||||||||| ||||||    
T  49900841 caattaataatatatacactactttcaaagtattatttttttctttaaagaaaaa 49900787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 51244918 - 51244861
Alignment:
Q  267 ttaatactatatacactacttccaaagtatta--ttatttctttaatgaaaaacaaat 322  Q
    ||||||||||||||| ||||||||||||| ||  |||||||||| |||||||| ||||    
T  51244918 ttaatactatatacattacttccaaagtaatattttatttctttgatgaaaaataaat 51244861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 5046 - 5087
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttc 305  Q
    ||||||||| |||||||||||||| |||||||||||| ||||    
T  5046 caattaatattatatacactactttcaaagtattattttttc 5087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Original strand, 24884455 - 24884488
Alignment:
Q  230 taactttttattttcaattatgcccttcaattaa 263  Q
    ||||||||||||||||||||| ||||||||||||    
T  24884455 taactttttattttcaattatacccttcaattaa 24884488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 317
Target Start/End: Original strand, 28538272 - 28538325
Alignment:
Q  265 aattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaa 317  Q
    |||||||||||||||||||| || ||| |||||| || ||||||||||||||||    
T  28538272 aattaatactatatacactattttcaatgtattatttttttctttaatgaaaaa 28538325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 44108666 - 44108726
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattattt--ctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||| |||||||||||||||||| |||  |||||||||||||||||    
T  44108666 caattaatactatgttacaatacttccaaagtattattttttttctttaatgaaaaacaaa 44108726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 5225892 - 5225856
Alignment:
Q  281 actacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||||||||||| | ||||||||||||||||    
T  5225892 actacttccaaagtattactttttctttaatgaaaaa 5225856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 14373543 - 14373491
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaa 263  Q
    |||||||  |||| |||| ||||||||||||||||||||| |||| |||||||    
T  14373543 tcagtttccaatgcaacaataactttttattttcaattataccctccaattaa 14373491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 16757278 - 16757242
Alignment:
Q  264 caattaatactatatacactacttccaaagtattatt 300  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  16757278 caattaatactatatacacaactttcaaagtattatt 16757242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 43759414 - 43759454
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaac 318  Q
    ||||||||||||||| | ||||| |||||||||||||||||    
T  43759414 tacactacttccaaaatgttattttttctttaatgaaaaac 43759454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 16128092 - 16128020
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||  |||| ||||||||    
T  16128092 caattaatactatatacactacttcaaaagtattattttttctttaatgaaaaacaaaccgatagttgattag 16128020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 10540562 - 10540490
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  10540562 caattaatactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgatta 10540490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 24163800 - 24163729
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatt 334  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||    
T  24163800 caattaatactatgttacactacttccaaagtattattatttctttaatgaaaaacaaactaatagttgatt 24163729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 1502838 - 1502781
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  1502838 caattaatactatatacactacttccaaaatattattttttatttaatgaaaaacaaa 1502781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 32193769 - 32193826
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  32193769 caattaatactatatacactacttccaaagtattatcttttctttaatgtaaaacaaa 32193826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 319
Target Start/End: Complemental strand, 12459404 - 12459349
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaaca 319  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  12459404 caattaatactatatacattacttccaaagtattgttttttctttaatgaaaaaca 12459349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 234101 - 234159
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  234101 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaa 234159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 3988829 - 3988772
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||| |||| ||| ||||||||||| ||||||||||||||||||||    
T  3988829 caattaatactatatatactatttcaaaagtattattttttctttaatgaaaaacaaa 3988772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 9940715 - 9940772
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| |||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  9940715 caattaatattatacacactacttccaaaatattattttttctttaatgaaaaacaaa 9940772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 12322972 - 12322919
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  12322972 caattaatactatatacactacttccaaagtattgtgttttctttaatgaaaaa 12322919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 17552332 - 17552275
Alignment:
Q  265 aattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  17552332 aattaatactatatacactacttccaaaatattatttttttctttaatgaaaaacaaa 17552275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 17828350 - 17828407
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||    
T  17828350 caattaatactatatacacttctttcaaagtattactttttctttaatgaaaaacaaa 17828407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 577128 - 577186
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||||    
T  577128 caattaatattatatacactacttccaaattattatttttttctttaatgaaaaacaaa 577186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 1134992 - 1135050
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||| ||||||||||    
T  1134992 caattaatactatattacactacttccaaaatattattttttctttaaagaaaaacaaa 1135050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 13011430 - 13011362
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||||||||||||||||||||| |||||   |||| ||||||||||||||||||||  |||| |||||||    
T  13011430 caattaatactatatacactactttcaaag---tattttttctttaatgaaaaacaaaccgatagttgatta 13011362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 20226299 - 20226234
Alignment:
Q  271 tactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||| ||||||||||||||| ||||||||  ||||||||||||||||||||  ||| ||||||||    
T  20226299 tactaaatacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattag 20226234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 22120283 - 22120218
Alignment:
Q  271 tactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||| ||||||||||||||| ||||||||  ||||||||||||||||||||  ||| ||||||||    
T  22120283 tactaaatacactacttccaatgtattatttattctttaatgaaaaacaaatcaatagttgattag 22120218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 29713492 - 29713419
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||| | ||| ||||||||    
T  29713492 caattaatactatgttacactactttcaaagtattattttttctttaataaaaaacaaactaatagttgattag 29713419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 266 - 336
Target Start/End: Complemental strand, 21271485 - 21271416
Alignment:
Q  266 attaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||| ||||||| ||||||||||| ||||||| ||||||||||||| |||||||  ||| ||||||||    
T  21271485 attaatattatatactctacttccaaattattatt-tttctttaatgaagaacaaatcaatagttgattag 21271416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 23259396 - 23259338
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||  ||| ||||||||    
T  23259396 tacactacttccaaagtattattttttctttagtgaaaagcaaatcaatagttgattag 23259338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 31443531 - 31443458
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||  ||||||||||||||||| |||||||||| ||||||||||  ||| ||||||||    
T  31443531 caattaatactatgttacataacttccaaagtattattttttctttaataaaaaacaaatcaatagttgattag 31443458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 13503932 - 13503871
Alignment:
Q  264 caattaatactatata--cactacttccaaagtatta--ttatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||  |||||||| ||||||||||  || ||||||||||||||||||||    
T  13503932 caattaatactatatatacactactttcaaagtattattttttttctttaatgaaaaacaaa 13503871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Complemental strand, 32619884 - 32619839
Alignment:
Q  290 aaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||| |||||||||||||||||||||  ||| |||||||    
T  32619884 aaagtattattttttctttaatgaaaaacaaatcaatagttgatta 32619839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Complemental strand, 17246722 - 17246678
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctt 307  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||    
T  17246722 caattaatactatgttacactacttccaaagtattattttttctt 17246678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 29636310 - 29636253
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  29636310 caattaatactatatacactacttctaaagtattattttttctttaatgaaaaacaaa 29636253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 21819350 - 21819407
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  21819350 caattaatactatatacattacttccaaaatattattttttctttaatgaaaaacaaa 21819407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 31418597 - 31418524
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||    
T  31418597 caattaatactatgttacactacttccaaagtattattttttctttaattaaaaacaaattaatagttgattag 31418524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 40753512 - 40753456
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  40753512 caattaatactatatacactactttcaaagtattatt-tttctttaatgaaaaacaaa 40753456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 335
Target Start/End: Complemental strand, 42880064 - 42879946
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatat-acactacttccaaagtattattatttcttta 309  Q
    |||||||| ||||||| | ||||||||| ||||||||| | ||||||||||||       |||||| | ||||||||||||||| |||||| ||||||||    
T  42880064 tcagttttcaatgtaataataactttttcttttcaattgtacccttcaattaa-------tactatgttacactacttccaaagaattattttttcttta 42879972  T
Q  310 atgaaaaacaaattgataattgatta 335  Q
    |||||||||||| | ||| |||||||    
T  42879971 atgaaaaacaaactaatagttgatta 42879946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 24133214 - 24133156
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||||||||||| ||||| |||||| ||||||| |||||||||||||||||||||    
T  24133214 caattaatactatatatactacatccaaaatattattttttctttaatgaaaaacaaat 24133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 28289281 - 28289339
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  28289281 caattaatactatatacactactttcaaagtattatttttttctttaatgaaaaacaaa 28289339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 35777886 - 35777944
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  35777886 caattagtactatattacactacttccaaagtattattttttctttaatgaaaaacaaa 35777944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 1031222 - 1031275
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| |||||    
T  1031222 caattaatactatatacactacttccaaattattattttttctttaataaaaaa 1031275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 8293151 - 8293094
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||    
T  8293151 aattaatattatatacactacttccaaattattattttttctgtaatgaaaaacaaat 8293094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 37815791 - 37815864
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||||||||||||||  ||| ||||||||    
T  37815791 caattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaatcaatagttgattag 37815864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 7759327 - 7759399
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| |||||||||||||| |||||||||||| ||||||||||  |||||||| | ||| ||||||||    
T  7759327 caattaatattatatacactactttcaaagtattattttttctttaatagaaaacaaactaatagttgattag 7759399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 8604042 - 8604086
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttcttt 308  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  8604042 caattaatactatatacactacttccaaagtattattttttcttt 8604086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 10476203 - 10476275
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||||||||||||||||||||||||  || |||| | ||||||||||  ||| ||||||||    
T  10476203 caattaatactatatacactacttccaaagtattatttattttttagtaaaaaacaaatcaatagttgattag 10476275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 22298078 - 22298121
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  22298078 tacactacttccaaagtattattttttctttaatgaaaaacaaa 22298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 48843622 - 48843677
Alignment:
Q  267 ttaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  48843622 ttaatactatatacactacttccaacgtattatttttttctttaatgaaaaacaaa 48843677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 1742058 - 1742116
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||||||||||||||||    
T  1742058 caattaatactatgttacactactttcaaagtattattttttctttaatgaaaaacaaa 1742116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 30312525 - 30312583
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||| | ||||||||||    
T  30312525 caattaatattgtatacactacttccaaagtattattttttctttagtaaaaaacaaat 30312583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 40339525 - 40339583
Alignment:
Q  264 caattaatactat-atacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  40339525 caattaatattattatacactacttccaaagtattcttttttctttaatgaaaaacaaa 40339583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 336
Target Start/End: Original strand, 24680215 - 24680268
Alignment:
Q  283 tacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||||| |||||||||||||||||||||  ||| ||||||||    
T  24680215 tacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgattag 24680268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 281 - 322
Target Start/End: Original strand, 27935852 - 27935893
Alignment:
Q  281 actacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  27935852 actacttccaaagtattattttttctttaatgaaaaacaaat 27935893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 336
Target Start/End: Complemental strand, 19105131 - 19105013
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaa 310  Q
    ||||||||||||| || | ||||||||| ||||||||| | ||||||||||||       ||||||||||| |||||  |||  |||||| |||||||||    
T  19105131 tcagtttttaatgcaataataactttttcttttcaattgtacccttcaattaa-------tactatatacattacttttaaaacattattttttctttaa 19105039  T
Q  311 tgaaaaacaaattgataattgattag 336  Q
    |||| |||||||  ||| ||||||||    
T  19105038 tgaagaacaaatcaatagttgattag 19105013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 4268679 - 4268737
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||||||||||||||| | |||||||||| ||||||| | | |||||||||||||||||    
T  4268679 caattaatactatatatattacttccaaattattattttctttttaatgaaaaacaaat 4268737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 13405211 - 13405153
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| ||||||||| || ||||||||||||||||||||    
T  13405211 caattaatactatgttacactactttcaaagtattgttttttctttaatgaaaaacaaa 13405153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 27947570 - 27947512
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||| || ||| |||||||||||||||||||||  ||| ||||||||    
T  27947570 tacactacttccaaaggatgattttttctttaatgaaaaacaaatcaatagttgattag 27947512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 33939818 - 33939764
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaa 317  Q
    ||||||||| ||||||||||| ||||||||||||| || ||||||||||||||||    
T  33939818 caattaatattatatacactaattccaaagtattacttttttctttaatgaaaaa 33939764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 45948714 - 45948656
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||| |||||||||| ||||||| ||||||||||||||||||||    
T  45948714 caattaatactatgttacattacttccaaaatattattttttctttaatgaaaaacaaa 45948656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 21752195 - 21752138
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||| | ||||||||||| || |||||||||||| | ||||||||||||||||||    
T  21752195 caattaacattatatacactattttcaaagtattattttatctttaatgaaaaacaaa 21752138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 47461457 - 47461401
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||| |||||||||||||||| | |||| |||||| ||||||||||||||||||||    
T  47461457 caattattactatatacactactcctaaag-attattttttctttaatgaaaaacaaa 47461401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 48684790 - 48684849
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    ||||||||||||| | |||| |||| |||||||||||| |||||||||| ||||||||||    
T  48684790 caattaatactatgttacaccactttcaaagtattattttttctttaataaaaaacaaat 48684849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 23935488 - 23935546
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||||| ||| |||||| |||||||||| |||||||||    
T  23935488 caattaatactatgttacactacttccgaaggattattttttctttaataaaaaacaaa 23935546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 25055869 - 25055907
Alignment:
Q  284 acttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  25055869 acttccaaaatattattttttctttaatgaaaaacaaat 25055907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 310
Target Start/End: Original strand, 31196637 - 31196683
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaa 310  Q
    ||||||||| ||||||||||| || |||||||||||| |||||||||    
T  31196637 caattaatattatatacactaatttcaaagtattattttttctttaa 31196683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 6563544 - 6563492
Alignment:
Q  211 tcagtttttaatgtaacagtaactttttattttcaattatgcccttcaattaa 263  Q
    |||||||||||| ||| | ||||||||| ||||||||| | ||||||||||||    
T  6563544 tcagtttttaatttaataataactttttcttttcaattgtacccttcaattaa 6563492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 14161986 - 14161933
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14161986 caattaatactatatacactacttccaaagtattattttttctttaatgaaaaa 14161933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 4425041 - 4425105
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgata 327  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  4425041 caattaatactatattacactacttccaaagtattattttttctttaatgaaaaacaaatcgata 4425105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 265 - 321
Target Start/End: Original strand, 11977656 - 11977712
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  11977656 aattaatattatatacactacttccaaagtattattttttctttaatgaacaacaaa 11977712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 36164954 - 36165026
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||  ||| ||||||||    
T  36164954 caattaatactatatacattacttccaaaatattattttttctttaataaaaaacaaatcaatagttgattag 36165026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 21634179 - 21634249
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||    
T  21634179 caattaatattatatacactacttccaaaatattatt-tttctttaatgaaaaacaaaccaataattgatta 21634249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 21642426 - 21642496
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||    
T  21642426 caattaatattatatacactacttccaaaatattatt-tttctttaatgaaaaacaaaccaataattgatta 21642496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 34446113 - 34446055
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  34446113 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaa 34446055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 3306080 - 3306023
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  3306080 tacactacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgatta 3306023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 15167097 - 15167044
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15167097 caattattactatatacactacttccaaaatattattttttctttaatgaaaaa 15167044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 34534426 - 34534483
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||  |||||||||||||| ||||||| ||||||||||||||||||||    
T  34534426 caattaatactatgcacactacttccaaaatattattttttctttaatgaaaaacaaa 34534483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 42662026 - 42661953
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||| ||||||||| | ||| ||||||||    
T  42662026 caattaatactatgttacactacttccaaagtattattttttctttaataaaaaacaaactaatagttgattag 42661953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 265 - 321
Target Start/End: Complemental strand, 7748982 - 7748926
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||  |||| |||||||||||| ||||||||||||||||||||    
T  7748982 aattaatactatatacataactttcaaagtattattttttctttaatgaaaaacaaa 7748926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 2729857 - 2729814
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  2729857 tacactacttccaaagtattattttttctttaatgaaaaacaaa 2729814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 7736451 - 7736513
Alignment:
Q  274 tatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||||||||||||| |||||||||||| ||||||||||||||||| || | ||| ||||||||    
T  7736451 tatatacactactttcaaagtattattttttctttaatgaaaaacgaactaatagttgattag 7736513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 14005959 - 14006017
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||||||| |||||||| ||||||||||||||||||||    
T  14005959 caattaatactatgttacactacttccaaggtattattttttctttaatgaaaaacaaa 14006017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 39566265 - 39566323
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||| | |||||||||||||||||||  ||| ||||||||    
T  39566265 tacactacttccaaagtattattttctctttaatgaaaaacaaatcaatagttgattag 39566323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 39730013 - 39730071
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||| ||||||| ||||||||||||||||||||    
T  39730013 caattaatactatgttacactacttccaaaatattattttttctttaatgaaaaacaaa 39730071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 14620565 - 14620508
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||   |||||||||||    
T  14620565 tacactacttccaaagtattattttttctttgatgaaaaacaaaccaataattgatta 14620508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 42104149 - 42104092
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||||    
T  42104149 caattaatactatgttacactacttccaaggtattattttttctttaatgaaaaacaa 42104092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 34382195 - 34382108
Alignment:
Q  234 tttttattttcaattatgcccttcaattaacaattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||| ||||||||| |  |||||| |||| | ||||||||||||||||||||| |||| ||| ||| ||| |||||||| |||||||    
T  34382195 tttttcttttcaattgtatccttcagttaatagttaatactatatacactactttcaaaatatcattttttatttaatgagaaacaaa 34382108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 1309444 - 1309386
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    ||||||||| |||||||||||||| |||  ||||||| |||||||||||| ||||||||    
T  1309444 caattaatattatatacactacttacaacatattattttttctttaatgataaacaaat 1309386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 6519043 - 6519117
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattattt-ctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | ||||||||| |||||||||||| ||| ||||||||||||||||||  ||| ||||||||    
T  6519043 caattaatactatgttacactactttcaaagtattatttttttctttaatgaaaaacaaatcaatagttgattag 6519117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 28591711 - 28591641
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||||||||||||||||| ||  |||  |||||| |||||||||||||||||||||  ||| |||||||    
T  28591711 aattaatactatatacactatttttaaaaaattattttttctttaatgaaaaacaaatcaatagttgatta 28591641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 286 - 336
Target Start/End: Complemental strand, 34972713 - 34972663
Alignment:
Q  286 ttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||| |||||||||| ||||||||||| ||| ||||||||    
T  34972713 ttccaaagtattattctttctttaataaaaaacaaattaatagttgattag 34972663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 38369939 - 38369993
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaac 318  Q
    ||||||||| |||||||||||||| |||||||||||| |||  ||||||||||||    
T  38369939 caattaatattatatacactactttcaaagtattatttttttattaatgaaaaac 38369993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 42978159 - 42978101
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| || ||||||||| ||||||||||||||||||||    
T  42978159 caattaatactatgttacactacttacatagtattattttttctttaatgaaaaacaaa 42978101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 843085 - 843142
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||| | ||||||||||||| ||||| ||||| |||||||||||| |||||||    
T  843085 caattaatattgtatacactacttcaaaagtgttattttttctttaatgagaaacaaa 843142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 4911191 - 4911143
Alignment:
Q  274 tatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||||| |||||||||| || ||||||||||||||||||||    
T  4911191 tatatacactactttcaaagtattatttttttctttaatgaaaaacaaa 4911143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 7721162 - 7721234
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||| |||| |||||||| ||||| |||||||||||| ||||||||| || |||||||   ||||||||||||    
T  7721162 caatcaatattatatacattactttcaaagtattattttttctttaaagacaaacaaaccaataattgattag 7721234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 27797851 - 27797902
Alignment:
Q  267 ttaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||   |||||||||||||||||| ||||||||||||||||||||    
T  27797851 ttaatactatatat--tacttccaaagtattatt-tttctttaatgaaaaacaaa 27797902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 39335290 - 39335231
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattattt-ctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||||||||| ||||| ||| |||||||||||||||||    
T  39335290 caattaatactatgttacactacttccaaagtgttatttttttctttaatgaaaaacaaa 39335231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 41645307 - 41645360
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||   | ||||||||||| ||||||||||||||||||||    
T  41645307 caattaatactatatacacta---caaaagtattatt-tttctttaatgaaaaacaaa 41645360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 24281164 - 24281209
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaa 310  Q
    ||||||||||||| ||| ||||| |||||||||||| |||||||||    
T  24281164 aattaatactatacacaatactttcaaagtattattttttctttaa 24281209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 24381047 - 24381002
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaa 310  Q
    ||||||||||||| ||| ||||| |||||||||||| |||||||||    
T  24381047 aattaatactatacacaatactttcaaagtattattttttctttaa 24381002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 307
Target Start/End: Original strand, 13761624 - 13761668
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctt 307  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||    
T  13761624 caattaatactatgttacactacttccaaagtattattttttctt 13761668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 27557901 - 27557865
Alignment:
Q  264 caattaatactatatacactacttccaaagtattatt 300  Q
    |||||||||||||||||||||||| |||| |||||||    
T  27557901 caattaatactatatacactactttcaaaatattatt 27557865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 265 - 317
Target Start/End: Complemental strand, 38362222 - 38362170
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    |||||||||| |||| |||||||  ||||||||||| |||||||||| |||||    
T  38362222 aattaatactttatatactacttttaaagtattattttttctttaataaaaaa 38362170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 38141017 - 38141089
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||   ||||||||||||    
T  38141017 caattaatactatatacactacttccaaaatataattttttctttaatgaaaaacaaaccaataattgattag 38141089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 40487895 - 40487966
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||| ||| |||||||    
T  40487895 caattaatactatatacactacttctaaagtattattttttctttatcgaaaaacaaattaatagttgatta 40487966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 30934892 - 30934835
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||    
T  30934892 caattaatactatatacactacttctaaagtattattttatctttaatgaaaaacaaa 30934835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 38016441 - 38016514
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| | ||| ||||||||    
T  38016441 caattaatactatgttacactacttccaaagtattattttttctttaatgaaaaacaaactaatagttgattag 38016514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 264 - 336
Target Start/End: Complemental strand, 36844825 - 36844753
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||| |||  ||| ||||||||    
T  36844825 caattaatattatatacactacttccaaagtattatgttttctttaatgaaaaactaatcaatagttgattag 36844753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 30315376 - 30315434
Alignment:
Q  264 caattaatactatatacactacttccaaa-gtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  30315376 caattaatactatatacactactttcaaaagtattattttttctttaatgaaaaacaaa 30315434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 9189518 - 9189461
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||| |||||||||| ||||||| |||||||||| |||||||||    
T  9189518 caattaatactatatacattacttccaaaatattattttttctttaataaaaaacaaa 9189461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 19373653 - 19373710
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||  |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19373653 caattaatatcatatacactacttccaaagttttattttttctttaatgaaaaacaaa 19373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 38363873 - 38363916
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  38363873 tacactacttccaaagtattattttttctttaatgaaaaacaaa 38363916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 23525399 - 23525341
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||| |||||||||||||||||| ||||||||||||||||||||    
T  23525399 caattaatactatgttacattacttccaaagtattattttttctttaatgaaaaacaaa 23525341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 45213805 - 45213747
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||    
T  45213805 caattaatactatattacactactttcaaagtattattttttctttaatgaaaagcaaa 45213747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 213 - 336
Target Start/End: Original strand, 51398033 - 51398150
Alignment:
Q  213 agtttttaatgtaacagtaactttttattttcaattatgcccttcaattaacaattaatactatat-acactacttccaaagtattattatttctttaat 311  Q
    |||||| ||||||| | ||||||||| ||||||||| | ||||||||||||       |||||| | |||||||||||||| ||||||| ||||||||||    
T  51398033 agttttcaatgtaataataactttttcttttcaattgtacccttcaattaa-------tactatgttacactacttccaaaatattattttttctttaat 51398125  T
Q  312 gaaaaacaaattgataattgattag 336  Q
    |||||| ||||  ||| ||||||||    
T  51398126 gaaaaataaatcaatagttgattag 51398150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 30431187 - 30431244
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  30431187 caattaatattatattacactacttccaaagtattattttttctctaatgaaaaacaa 30431244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 335
Target Start/End: Complemental strand, 33194099 - 33194042
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||| |||||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  33194099 tacattacttccaaagtattattttttctttaatgaaaaacaaatcaatagttgatta 33194042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 48901787 - 48901844
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| || || ||||||||| |||||||||| |||||||||    
T  48901787 caattaatactatatacactaatttcatagtattattttttctttaattaaaaacaaa 48901844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 48903353 - 48903410
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||||||||||| || || ||||||||| |||||||||| |||||||||    
T  48903353 caattaatactatatacactaatttcatagtattattttttctttaattaaaaacaaa 48903410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 317
Target Start/End: Complemental strand, 35557826 - 35557787
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  35557826 tacactacttccaaagtattattttttctttaatgaaaaa 35557787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 39359002 - 39359045
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||    
T  39359002 tacactacttctaaagtattattttttctttaatgaaaaacaaa 39359045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Original strand, 42072052 - 42072123
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| |||||||| |||||| ||||||||||  ||||||||||| |||||||||  ||| |||||||    
T  42072052 caattaatattatatacattacttctaaagtattatgttttctttaatggaaaacaaatcaatagttgatta 42072123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 44676303 - 44676346
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||    
T  44676303 tacactagttccaaagtattattttttctttaatgaaaaacaaa 44676346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 336
Target Start/End: Original strand, 11393627 - 11393685
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||||||||||| |||||||||| || |||||||  ||| ||||||||    
T  11393627 tacactacttccaaagtattattttttctttaattaataacaaatcaatagttgattag 11393685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 31853645 - 31853587
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| |||||||||||| |||||||||||||| |||||    
T  31853645 caattaatactatgttacactactttcaaagtattattttttctttaatgaaagacaaa 31853587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 47895427 - 47895369
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||| ||||||||||||||| ||||||||||||||| ||||    
T  47895427 caattaatactatgttacactatttccaaagtattattttttctttaatgaaaagcaaa 47895369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 50088399 - 50088341
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||||||||| |||||||||| | ||||||||||||||||||||    
T  50088399 caattaatactatgttacactactttcaaagtattaatttttctttaatgaaaaacaaa 50088341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 317
Target Start/End: Original strand, 22857157 - 22857210
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaa 317  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||||| |||||    
T  22857157 caattaatattatatacactacttctaaaatattattttttctttaataaaaaa 22857210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 36729878 - 36729835
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||| |||||||||||||||||| ||| ||||||||||||||||    
T  36729878 tacattacttccaaagtattattttttatttaatgaaaaacaaa 36729835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 316
Target Start/End: Original strand, 2458074 - 2458128
Alignment:
Q  264 caattaatactatat-acactacttccaaagtatt-attatttctttaatgaaaa 316  Q
    ||||||||||||||| |||||||||||||||||||  || |||||||||||||||    
T  2458074 caattaatactatattacactacttccaaagtattgtttttttctttaatgaaaa 2458128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 336
Target Start/End: Original strand, 8817218 - 8817280
Alignment:
Q  274 tatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||| |||||||||| || |||||||| |||||||||||||||| ||||  ||| ||||||||    
T  8817218 tatacacactacttctaatgtattattttttctttaatgaaaaataaatcaatagttgattag 8817280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 336
Target Start/End: Complemental strand, 32492249 - 32492192
Alignment:
Q  278 tacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    ||||||||||||||| ||||||| |||||||||| ||||| ||||  ||||||||||||    
T  32492249 tacactacttccaaaatattattttttctttaat-aaaaaaaaatcaataattgattag 32492192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 50346692 - 50346750
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaat 322  Q
    |||| |||| || ||||| |||||||||  ||||||| |||||||||||||||||||||    
T  50346692 caatcaataataaatacattacttccaacatattattttttctttaatgaaaaacaaat 50346750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 36460891 - 36460930
Alignment:
Q  281 actacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  36460891 actacttccaaagtattatt-tttctttgatgaaaaacaaa 36460930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 657 - 586
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    ||||||||| ||||||||||||||||||||||||||| ||  |||||||||||| ||||  ||| |||||||    
T  657 caattaatattatatacactacttccaaagtattatttttgttttaatgaaaaagaaatcaatagttgatta 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 3590 - 3532
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||||||    
T  3590 caattaatactatgttacactacttctaaagtattattttttctttaatgaaaaacaaa 3532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Original strand, 4208 - 4277
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgat 333  Q
    ||||||||| ||||||||||||||| |||||||| || || ||||||| ||||||||||| ||| |||||    
T  4208 caattaatattatatacactacttctaaagtattgtttttcctttaataaaaaacaaattaatagttgat 4277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 10040 - 9969
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgatta 335  Q
    |||||| ||||||||||| |||||| ||| ||||||| ||||||||| |||||||||| | ||| |||||||    
T  10040 caattagtactatatacaatacttcaaaaatattattttttctttaaggaaaaacaaactaatagttgatta 9969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 9727 - 9671
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaa 320  Q
    ||||||||||||| | |||||||||||||| ||||||| |||||||||||||||||||    
T  9727 caattaatactatgttacactacttccaaa-tattattttttctttaatgaaaaacaa 9671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 9611 - 9669
Alignment:
Q  264 caattaatactatatacactacttccaaagtatta-ttatttctttaatgaaaaacaaa 321  Q
    |||||||||||||||| ||||||| |||| ||||| || ||||||||||||||||||||    
T  9611 caattaatactatatatactactttcaaattattatttttttctttaatgaaaaacaaa 9669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 24826 - 24768
Alignment:
Q  264 caattaatactatat-acactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||||||||| | ||| |||||||||||||||||  ||||||||||||||||||||    
T  24826 caattaatactatgttacaatacttccaaagtattatcttttctttaatgaaaaacaaa 24768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 18340 - 18283
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaa 321  Q
    ||||||| | ||||||||||| || |||||||||||| | ||||||||||||||||||    
T  18340 caattaacattatatacactattttcaaagtattattttatctttaatgaaaaacaaa 18283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 4632 - 4704
Alignment:
Q  264 caattaatactatatacactacttccaaagtattattatttctttaatgaaaaacaaattgataattgattag 336  Q
    |||| |||| ||||||||||||||||||| ||||||  || ||||||| ||||||||||  ||| ||||||||    
T  4632 caatcaatattatatacactacttccaaaatattatatttactttaataaaaaacaaatcaatagttgattag 4704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 265 - 319
Target Start/End: Complemental strand, 771 - 717
Alignment:
Q  265 aattaatactatatacactacttccaaagtattattatttctttaatgaaaaaca 319  Q
    |||||||| ||||||||||| ||||||||  || || ||||||||||||||||||    
T  771 aattaatattatatacactaattccaaagacttgttttttctttaatgaaaaaca 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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