View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4154_low_21 (Length: 334)
Name: NF4154_low_21
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4154_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 18 - 188
Target Start/End: Original strand, 45846760 - 45846930
Alignment:
| Q |
18 |
atagtttgtctattttgaaaatagaaagagaaggagagtcaaggagaatatagtagagagggagggttgtacaaatggttttgtgttgcattttatagca |
117 |
Q |
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| T |
45846760 |
atagtttgtctattttgaaaatagaaagagaaggagagtcaaggagaatatagtagagagggagggttgtacaaatggttttgtgttgcattttatagca |
45846859 |
T |
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| Q |
118 |
tttgaatgagtacaattgcccttaggaacttttggagggctaaaacatttaacatcgaccggcctaaatcg |
188 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45846860 |
tttgaatgagtacaattgcccttacgaacttttggagggctaaaacatttaacatcgaccggcctaaatcg |
45846930 |
T |
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