View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4154_low_23 (Length: 306)
Name: NF4154_low_23
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4154_low_23 |
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Alignment Details
Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 11 - 292
Target Start/End: Complemental strand, 44708720 - 44708439
Alignment:
| Q |
11 |
catcatcagatcggttctgccagtattggtcgaaatgaactatgttagcctcgaaggttgggactatagcaagaaaaaatacacaaccaaagagcaatct |
110 |
Q |
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| T |
44708720 |
catcatcagatcggttctgccagtattggtcgaaatgaactatgttagcctcgaagattgggactatagcaagaaaaaatacacaaccaaagagcaatct |
44708621 |
T |
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| Q |
111 |
aagcttgttgacttccattctttcaaatatttcgttatccttatcaaattttctatgtttcttgtttgcttaattatgtttcttttatagtttgaaatcc |
210 |
Q |
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| T |
44708620 |
acgcttgttgacttccattctttcaaatgtttcgttatccttatcaaattttctatgtttcttgtttgcttaattatgtttcttttatagtttgaaatcc |
44708521 |
T |
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| Q |
211 |
tcattcctgattttgtgcatggccctacgtacgcggtattattagatcctcttagtgccataactatatgtgaatgtgaatg |
292 |
Q |
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| T |
44708520 |
tcattcctgattttgtgcatggccctacgtacgcggtattattagatcctcttagtgccatatctatatgtgaatgtgaatg |
44708439 |
T |
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