View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4154_low_40 (Length: 249)
Name: NF4154_low_40
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4154_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 10 - 245
Target Start/End: Original strand, 12073342 - 12073577
Alignment:
| Q |
10 |
ttatacttaaagtagcatgatggtttcaaagtgaataacataaaatagaaagttatctttactctaacagtagcatgtattttgataccccaaaatggct |
109 |
Q |
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| T |
12073342 |
ttatacttaaagtagcatgatggtttcaaagtgaataacataaaacagaaagttatctttactctaacagtagcatgtattttgataccccaaaatggct |
12073441 |
T |
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| Q |
110 |
tacactgttcaaaatatcaaattgtatgacgaaagtacacattcccatcaaatctattcgcgtagcccgatcaaatgtgacaccctaaccagcttgatct |
209 |
Q |
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| T |
12073442 |
tacactgttcaaaatatcaaattgtatgacgaaagtacacattcccatcaaatctattcgcgtagcccgatcaaatgtgacaccctaaccagcttgatct |
12073541 |
T |
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| Q |
210 |
attaatttgagaaacaaacatgtaatgcaaaactgg |
245 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
12073542 |
attaatttgagaaacaaacatgtaatgcaaaactgg |
12073577 |
T |
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