View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4154_low_47 (Length: 237)

Name: NF4154_low_47
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4154_low_47
NF4154_low_47
[»] chr4 (47 HSPs)
chr4 (4-170)||(27581097-27581263)
chr4 (170-221)||(2480813-2480864)
chr4 (163-221)||(10687628-10687686)
chr4 (163-221)||(10901268-10901326)
chr4 (169-221)||(6687850-6687902)
chr4 (169-221)||(38070568-38070620)
chr4 (170-221)||(14988607-14988658)
chr4 (170-221)||(45423893-45423944)
chr4 (170-221)||(50053593-50053644)
chr4 (167-221)||(38056076-38056130)
chr4 (176-221)||(40428118-40428163)
chr4 (181-221)||(6610748-6610788)
chr4 (173-221)||(28361236-28361284)
chr4 (170-221)||(15670027-15670078)
chr4 (174-221)||(27531963-27532010)
chr4 (170-221)||(28031934-28031985)
chr4 (170-221)||(53408937-53408988)
chr4 (170-221)||(53716706-53716757)
chr4 (166-221)||(54190374-54190429)
chr4 (170-220)||(27488147-27488197)
chr4 (171-221)||(41852213-41852263)
chr4 (173-221)||(9595300-9595348)
chr4 (169-221)||(19912926-19912978)
chr4 (173-221)||(33704682-33704730)
chr4 (170-214)||(52140124-52140168)
chr4 (170-221)||(1756249-1756300)
chr4 (174-221)||(8590096-8590143)
chr4 (174-221)||(16701628-16701675)
chr4 (170-221)||(35490260-35490311)
chr4 (170-213)||(44784212-44784255)
chr4 (170-221)||(50354461-50354512)
chr4 (175-221)||(16704869-16704915)
chr4 (175-221)||(20877786-20877832)
chr4 (167-213)||(23702063-23702109)
chr4 (171-221)||(43289448-43289498)
chr4 (175-221)||(47632951-47632997)
chr4 (172-221)||(23775764-23775812)
chr4 (176-221)||(53353713-53353758)
chr4 (184-221)||(53876411-53876448)
chr4 (170-214)||(15240321-15240365)
chr4 (173-221)||(26088184-26088232)
chr4 (173-221)||(27583128-27583176)
chr4 (173-213)||(48910608-48910648)
chr4 (181-221)||(51780283-51780323)
chr4 (170-221)||(30172359-30172410)
chr4 (169-213)||(4825454-4825498)
chr4 (175-207)||(23261220-23261252)
[»] chr7 (29 HSPs)
chr7 (169-221)||(4476315-4476367)
chr7 (169-221)||(17754444-17754496)
chr7 (165-221)||(5281549-5281605)
chr7 (173-221)||(6395934-6395982)
chr7 (170-221)||(18120693-18120744)
chr7 (170-221)||(43407795-43407846)
chr7 (165-221)||(934162-934218)
chr7 (169-221)||(33358406-33358458)
chr7 (170-221)||(12097085-12097136)
chr7 (174-221)||(33845868-33845915)
chr7 (170-221)||(38867466-38867517)
chr7 (170-216)||(43157391-43157437)
chr7 (163-220)||(36890256-36890313)
chr7 (165-221)||(15648613-15648669)
chr7 (165-221)||(37004109-37004165)
chr7 (165-221)||(42205205-42205261)
chr7 (170-221)||(7164841-7164892)
chr7 (167-214)||(12100477-12100524)
chr7 (174-221)||(32042199-32042246)
chr7 (170-220)||(8631583-8631633)
chr7 (174-220)||(16893830-16893876)
chr7 (163-221)||(24791810-24791868)
chr7 (170-220)||(42964103-42964153)
chr7 (165-221)||(3512233-3512289)
chr7 (170-221)||(9453434-9453485)
chr7 (170-221)||(25749139-25749190)
chr7 (166-221)||(30180061-30180116)
chr7 (175-221)||(22648923-22648969)
chr7 (170-220)||(43021059-43021109)
[»] chr1 (42 HSPs)
chr1 (169-221)||(8078948-8079000)
chr1 (169-221)||(52697500-52697552)
chr1 (170-221)||(51358672-51358723)
chr1 (163-221)||(38829967-38830025)
chr1 (165-221)||(46410103-46410159)
chr1 (170-221)||(23323476-23323527)
chr1 (172-221)||(32672497-32672546)
chr1 (165-221)||(7146505-7146561)
chr1 (165-221)||(20097530-20097586)
chr1 (173-221)||(29079344-29079392)
chr1 (170-221)||(1171360-1171411)
chr1 (170-221)||(23318849-23318900)
chr1 (170-221)||(25898082-25898133)
chr1 (170-221)||(29288948-29288999)
chr1 (170-221)||(39259698-39259749)
chr1 (170-221)||(42369641-42369692)
chr1 (165-214)||(38172615-38172664)
chr1 (172-220)||(16052993-16053041)
chr1 (173-221)||(46761813-46761861)
chr1 (170-221)||(1168710-1168761)
chr1 (170-213)||(15718534-15718577)
chr1 (170-221)||(17586687-17586738)
chr1 (170-221)||(17592529-17592580)
chr1 (171-214)||(26579508-26579551)
chr1 (170-221)||(33511118-33511169)
chr1 (170-221)||(40093343-40093394)
chr1 (174-221)||(41927793-41927840)
chr1 (170-221)||(52752514-52752565)
chr1 (172-214)||(969851-969893)
chr1 (175-213)||(8121716-8121754)
chr1 (174-220)||(13995951-13995997)
chr1 (174-220)||(14004065-14004111)
chr1 (170-220)||(15203783-15203833)
chr1 (175-221)||(23499255-23499301)
chr1 (157-221)||(6766279-6766343)
chr1 (181-221)||(43906395-43906435)
chr1 (170-221)||(1940246-1940297)
chr1 (170-213)||(2478469-2478512)
chr1 (175-214)||(26664012-26664051)
chr1 (174-216)||(52088462-52088504)
chr1 (176-221)||(2348575-2348620)
chr1 (173-221)||(5678595-5678643)
[»] chr3 (34 HSPs)
chr3 (170-221)||(15521489-15521540)
chr3 (170-221)||(22175447-22175498)
chr3 (170-221)||(50529775-50529826)
chr3 (169-221)||(29784202-29784254)
chr3 (170-221)||(20699977-20700028)
chr3 (170-221)||(37697429-37697480)
chr3 (171-221)||(44608809-44608859)
chr3 (169-221)||(29446358-29446410)
chr3 (170-221)||(12116970-12117021)
chr3 (170-221)||(13697558-13697609)
chr3 (170-221)||(16355367-16355418)
chr3 (170-221)||(21581890-21581941)
chr3 (174-221)||(35227193-35227240)
chr3 (170-221)||(42307230-42307281)
chr3 (170-220)||(20841674-20841724)
chr3 (171-221)||(36787444-36787494)
chr3 (175-221)||(49129922-49129968)
chr3 (170-220)||(54533334-54533384)
chr3 (170-214)||(32245038-32245082)
chr3 (170-221)||(8043523-8043574)
chr3 (170-221)||(15517922-15517973)
chr3 (170-221)||(26000190-26000241)
chr3 (170-221)||(34701072-34701123)
chr3 (170-221)||(38856746-38856797)
chr3 (170-221)||(38934787-38934838)
chr3 (170-213)||(42103546-42103589)
chr3 (175-221)||(32360173-32360219)
chr3 (176-221)||(46451650-46451695)
chr3 (173-221)||(24835355-24835403)
chr3 (173-221)||(44689671-44689719)
chr3 (170-213)||(25493724-25493767)
chr3 (175-221)||(26123512-26123558)
chr3 (182-220)||(52922298-52922336)
chr3 (176-221)||(53028963-53029008)
[»] chr6 (19 HSPs)
chr6 (164-221)||(6085933-6085990)
chr6 (169-221)||(34887128-34887180)
chr6 (170-221)||(53747-53798)
chr6 (170-221)||(16306470-16306521)
chr6 (165-221)||(33465201-33465257)
chr6 (170-221)||(9460452-9460503)
chr6 (170-221)||(10551041-10551092)
chr6 (170-221)||(18614384-18614435)
chr6 (170-221)||(26703656-26703707)
chr6 (175-221)||(3955122-3955168)
chr6 (165-214)||(30691800-30691849)
chr6 (173-221)||(26946374-26946422)
chr6 (170-221)||(20727448-20727499)
chr6 (172-214)||(2838408-2838450)
chr6 (165-214)||(3346832-3346881)
chr6 (172-220)||(35198958-35199006)
chr6 (182-221)||(17260382-17260421)
chr6 (170-221)||(30692684-30692735)
chr6 (181-221)||(23073674-23073714)
[»] chr2 (26 HSPs)
chr2 (176-221)||(39636197-39636242)
chr2 (170-221)||(33905284-33905335)
chr2 (163-220)||(19900651-19900708)
chr2 (169-221)||(12517392-12517444)
chr2 (170-221)||(851753-851804)
chr2 (170-221)||(1481269-1481320)
chr2 (170-221)||(3872476-3872527)
chr2 (170-221)||(26322516-26322567)
chr2 (167-221)||(19383343-19383397)
chr2 (175-221)||(28323012-28323058)
chr2 (173-214)||(31516566-31516607)
chr2 (173-221)||(5734242-5734290)
chr2 (169-221)||(18806112-18806164)
chr2 (173-221)||(42938639-42938687)
chr2 (170-221)||(1110140-1110191)
chr2 (170-221)||(12516397-12516448)
chr2 (174-220)||(2178132-2178178)
chr2 (174-220)||(4231658-4231704)
chr2 (175-213)||(16065740-16065778)
chr2 (170-220)||(30419419-30419469)
chr2 (170-223)||(39463863-39463916)
chr2 (176-221)||(42445088-42445133)
chr2 (191-221)||(16588296-16588326)
chr2 (173-214)||(1679407-1679448)
chr2 (170-214)||(6174322-6174366)
chr2 (165-221)||(30265973-30266029)
[»] chr8 (33 HSPs)
chr8 (165-221)||(15730449-15730505)
chr8 (170-221)||(10830656-10830707)
chr8 (170-221)||(18595393-18595444)
chr8 (170-221)||(44804183-44804234)
chr8 (172-221)||(883439-883488)
chr8 (164-221)||(4716627-4716684)
chr8 (165-221)||(2041793-2041849)
chr8 (165-213)||(14423590-14423638)
chr8 (169-221)||(22259926-22259978)
chr8 (173-221)||(39219454-39219502)
chr8 (170-221)||(24112477-24112528)
chr8 (170-221)||(26782015-26782066)
chr8 (170-221)||(34678956-34679007)
chr8 (170-221)||(35117502-35117553)
chr8 (166-214)||(36494915-36494963)
chr8 (165-221)||(40116672-40116728)
chr8 (174-221)||(4036506-4036553)
chr8 (170-221)||(6143773-6143824)
chr8 (170-221)||(33286439-33286490)
chr8 (173-220)||(42572266-42572313)
chr8 (163-221)||(34998168-34998226)
chr8 (176-221)||(9807955-9808000)
chr8 (173-214)||(38166235-38166276)
chr8 (174-210)||(34841838-34841874)
chr8 (165-213)||(39222156-39222204)
chr8 (170-214)||(41576258-41576302)
chr8 (174-221)||(6082907-6082954)
chr8 (170-213)||(18684893-18684936)
chr8 (170-213)||(18730458-18730501)
chr8 (170-221)||(29939218-29939269)
chr8 (176-221)||(2320503-2320548)
chr8 (173-213)||(5015254-5015294)
chr8 (170-206)||(8022384-8022420)
[»] chr5 (22 HSPs)
chr5 (173-221)||(33992056-33992104)
chr5 (165-220)||(16070272-16070327)
chr5 (170-221)||(27421519-27421570)
chr5 (169-220)||(41817996-41818047)
chr5 (164-221)||(26602280-26602337)
chr5 (170-221)||(19360817-19360868)
chr5 (171-221)||(8373600-8373650)
chr5 (170-220)||(35419918-35419968)
chr5 (173-214)||(33490503-33490544)
chr5 (173-221)||(24104961-24105009)
chr5 (169-221)||(27678492-27678544)
chr5 (170-221)||(9007292-9007343)
chr5 (170-221)||(19515495-19515546)
chr5 (170-221)||(27025846-27025897)
chr5 (170-221)||(38597158-38597209)
chr5 (175-221)||(31884039-31884085)
chr5 (175-221)||(34708283-34708329)
chr5 (173-221)||(16736638-16736686)
chr5 (169-221)||(35419631-35419683)
chr5 (170-213)||(1165052-1165095)
chr5 (176-214)||(1579701-1579739)
chr5 (176-214)||(1605076-1605114)
[»] scaffold0920 (1 HSPs)
scaffold0920 (170-221)||(171-222)
[»] scaffold0167 (1 HSPs)
scaffold0167 (171-221)||(18256-18306)
[»] scaffold1827 (1 HSPs)
scaffold1827 (176-221)||(136-181)
[»] scaffold0172 (1 HSPs)
scaffold0172 (165-221)||(11014-11072)


Alignment Details
Target: chr4 (Bit Score: 159; Significance: 8e-85; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 4 - 170
Target Start/End: Original strand, 27581097 - 27581263
Alignment:
Q  4 tagcaagtttgtttcaatataaacatatatgggtatgtgtatgcttctagagatgattctacatgcaatgaaaatgttacgactacggtctcaatactat 103  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27581097 tagcaagtgtgtttcaatataaacatatatgggtatgtgtatgcttctagagatgattctacatgcaatgaaaatgttacgactacggtctcaatactac 27581196  T
Q  104 acaaagcatcatttttcaagacaaaattccaagaaaattggtcatcatgctccaaaaggacattttg 170  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27581197 acaaagcatcatttttcaagacaaaattccaagaaaattggtcatcatgctccaaaaggacattttg 27581263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 2480813 - 2480864
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2480813 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 2480864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 10687628 - 10687686
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10687628 acatttaggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 10687686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 10901268 - 10901326
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  10901268 acatttaggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 10901326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 6687850 - 6687902
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  6687850 tggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 6687902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 38070568 - 38070620
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38070568 tggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 38070620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 14988658 - 14988607
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  14988658 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 14988607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 45423893 - 45423944
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  45423893 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 45423944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 50053593 - 50053644
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  50053593 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 50053644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 221
Target Start/End: Complemental strand, 38056130 - 38056076
Alignment:
Q  167 tttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  38056130 tttggccccgtttggataaacagcttatatagatgcttaaagcattagggcttat 38056076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 40428118 - 40428163
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  40428118 gtttggataaacagcttatatagatgcttatagcattagagcttat 40428163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 6610748 - 6610788
Alignment:
Q  181 gataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  6610748 gataaacagcttatatagatgcttatagcattagagcttat 6610788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 28361284 - 28361236
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  28361284 cccgtttggataaacagcttatatagatgcttataggattagagcttat 28361236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 15670078 - 15670027
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  15670078 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 15670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 27531963 - 27532010
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||    
T  27531963 ccgtttggataaacaacttatatagatgcttatagcattagagcttat 27532010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 28031934 - 28031985
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||    
T  28031934 ggccccgtttggataaacagcttatatagatgcttatagcatccgagcttat 28031985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 53408988 - 53408937
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  53408988 ggccctgtttggataaacagcttatatagatgcttatagcattagggcttat 53408937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 53716706 - 53716757
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  53716706 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 53716757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 54190429 - 54190374
Alignment:
Q  166 ttttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||| ||||||    
T  54190429 ttttggccccgtttggataaacatcttatatagatgtttatagcattagtgcttat 54190374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 27488147 - 27488197
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  27488147 ggccccgtttggataaacagcttatatagatgtttatggcattagagctta 27488197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 41852213 - 41852263
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  41852213 gccccgtttggataaaaagcttatatagatgcttatagcattagggcttat 41852263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 9595300 - 9595348
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  9595300 cccgtttggataaatagcttatatagatgcttatagcattagggcttat 9595348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 19912926 - 19912978
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  19912926 tggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 19912978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 33704730 - 33704682
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  33704730 cccgtttggataaacagcttatatagatgcttatatcattagggcttat 33704682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 52140168 - 52140124
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  52140168 ggccccgtttggataaacaacttatatagatgcttatagcattag 52140124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1756249 - 1756300
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  1756249 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 1756300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 8590096 - 8590143
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  8590096 ccgtttggataaacagtttatatagatgcttatatcattagagcttat 8590143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 16701675 - 16701628
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  16701675 ccgtttggataaacaacttatatagatgcttatagcattagggcttat 16701628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 35490260 - 35490311
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||| ||||||    
T  35490260 ggccccgtttggataaacaacttatatagatgcttatggcattagggcttat 35490311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 44784212 - 44784255
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||||||||| |||||||| ||||||||||||||||||||||||    
T  44784212 ggccccgtttggataaacaacttatatagatgcttatagcatta 44784255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 50354512 - 50354461
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  50354512 ggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 50354461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 16704915 - 16704869
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  16704915 cgtttggataaacagtttatatagatgcttatagtattagagcttat 16704869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 20877832 - 20877786
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  20877832 cgtttggataaacaacttatatagatgcttatagcattagtgcttat 20877786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 23702063 - 23702109
Alignment:
Q  167 tttggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  23702063 tttggtcccgtttggataaacagtttatatagatgcttatagcatta 23702109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 43289448 - 43289498
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||| |||||||||||||||||||||||||| |||| || ||||||    
T  43289448 gccccgtttggataaacagcttatatagatgcttatggcatcagggcttat 43289498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 47632997 - 47632951
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  47632997 cgtttggataaacagcttatataaatgcttatagcattagggcttat 47632951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 221
Target Start/End: Original strand, 23775764 - 23775812
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  23775764 ccccgtttggataa-caacttatatagatgcttatagcattagagcttat 23775812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 53353758 - 53353713
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  53353758 gtttggataaacagcttatatagatgcttatggcattagggcttat 53353713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 53876448 - 53876411
Alignment:
Q  184 aaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  53876448 aaacaacttatatagatgcttatagcattagagcttat 53876411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 15240321 - 15240365
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||||  |||||||| |||||||||||||||||||||||||    
T  15240321 ggccccgttcggataaacaacttatatagatgcttatagcattag 15240365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 26088184 - 26088232
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||| ||||||| |||||||||||||||||| |||||    
T  26088184 cccgtttggataaacaacttatattgatgcttatagcattagaacttat 26088232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 27583128 - 27583176
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||| |||||||||| |||||||||||||||| ||||||    
T  27583128 cccgtttggataaaaagcttatataaatgcttatagcattagggcttat 27583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 48910648 - 48910608
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  48910648 cccgtttggataaacaacttatatagatgcttatagcatta 48910608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 51780283 - 51780323
Alignment:
Q  181 gataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  51780283 gataaacaacttatatagatgtttatagcattagagcttat 51780323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 30172410 - 30172359
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| ||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  30172410 ggccccatttggataaacaacttatatagatgcttatagtattagggcttat 30172359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 4825498 - 4825454
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||| ||||||| |||||| |||||||||||| |||||||||||    
T  4825498 tggcctcgtttaggtaaacaacttatatagatgtttatagcatta 4825454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 23261220 - 23261252
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttata 207  Q
    ||||| |||||||||||||||||||||||||||    
T  23261220 cgtttggataaacagcttatatagatgcttata 23261252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 4476315 - 4476367
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4476315 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 4476367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 17754496 - 17754444
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17754496 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 17754444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 5281605 - 5281549
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  5281605 atttaggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 5281549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 6395982 - 6395934
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6395982 cccgtttggataaacagcttatatagatgcttatagcattagagcttat 6395934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 18120693 - 18120744
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  18120693 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 18120744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 43407846 - 43407795
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  43407846 ggccccgtttggataaacagcttatattgatgcttatagcattagagcttat 43407795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 934218 - 934162
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  934218 atttaggccccgtttggataaacagtttatatagatgcttatagcattagggcttat 934162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 33358406 - 33358458
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  33358406 tggccccgtttggataaacatcttatatagatgcttatagcattagtgcttat 33358458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 12097085 - 12097136
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  12097085 ggccccgtttggataaacagcttatatagatgcttatggcattagggcttat 12097136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 33845868 - 33845915
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33845868 ccgtttggataaacagcttatatagatgcttatagcattagtgcttat 33845915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 38867517 - 38867466
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  38867517 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 38867466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 216
Target Start/End: Complemental strand, 43157437 - 43157391
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagag 216  Q
    |||||||||| |||||||| |||||||||||||||||||||||||||    
T  43157437 ggccccgtttggataaacaacttatatagatgcttatagcattagag 43157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 36890256 - 36890313
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| |||||||||| |||||||| |||||||||||||||||| |||||| |||||    
T  36890256 acatttaggccccgtttggataaacaacttatatagatgcttataccattagggctta 36890313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 15648613 - 15648669
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||| ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  15648613 atttaggccccatttggataaacagcttatattgatgcttatagcagtagagcttat 15648669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 37004109 - 37004165
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||| ||| ||||||||| |||||| ||||||||||||||||||||||||    
T  37004109 atttaggccccatttggataaacagtttatattgatgcttatagcattagagcttat 37004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 42205261 - 42205205
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||| | ||||||    
T  42205261 atttaggccccgtttggataaacaacttatatagatgcttatagcattggggcttat 42205205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 7164892 - 7164841
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  7164892 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 7164841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 12100477 - 12100524
Alignment:
Q  167 tttggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||| |||||| |||||||||||||||||||||||||||| |||||    
T  12100477 tttggctccgtttggataaacagcttatatagatgcttatagaattag 12100524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 32042246 - 32042199
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||||    
T  32042246 ccgtttggataaacaacttatatagatgcttatatcattagagcttat 32042199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 8631633 - 8631583
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||||| || |||||||| |||||||||||| ||||||||||||||||||    
T  8631633 ggccccgcttggataaacaacttatatagatgtttatagcattagagctta 8631583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 16893830 - 16893876
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||    
T  16893830 ccgtttggataaacaacttatatagatgcttataacattagagctta 16893876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 24791810 - 24791868
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||| |||| ||||||||||||||||||||| |||| | ||||||||||||    
T  24791810 acattatggccctgtttggataaacagcttatatagatgtttatggtattagagcttat 24791868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 42964103 - 42964153
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||||||||  |||||||||||||||| ||||||||| ||||||||||||    
T  42964103 ggccccgtttgaataaacagcttatatatatgcttataacattagagctta 42964153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 3512289 - 3512233
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||| ||||| |||||||| |||||||||| |||||||||||||| ||||||    
T  3512289 atttaggcctcgtttggataaacaacttatatagacgcttatagcattagggcttat 3512233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 9453485 - 9453434
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||  ||||||| ||||||||||| ||||||||||||| ||||||    
T  9453485 ggccccgtttgaataaacaacttatatagatacttatagcattagggcttat 9453434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 25749190 - 25749139
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| || |||||||| ||||||||||||||||| ||||||| ||||||    
T  25749190 ggccccggttggataaacaacttatatagatgcttatggcattagggcttat 25749139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 30180061 - 30180116
Alignment:
Q  166 ttttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||| |||||||| |||||||| |||||| | ||||||||| ||||    
T  30180061 ttttggccccgtttggataaacaacttatatacatgcttgttgcattagagtttat 30180116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 22648923 - 22648969
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  22648923 cgtttggataaacaacttatatagatgcttatagtattagggcttat 22648969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 43021059 - 43021109
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||| |||| |||||||| |||||||| |||||||||||||||| |||||    
T  43021059 ggccctgtttggataaacaacttatataaatgcttatagcattagggctta 43021109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 8078948 - 8079000
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8078948 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 8079000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 52697552 - 52697500
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  52697552 tggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 52697500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 51358672 - 51358723
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  51358672 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 51358723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 38830025 - 38829967
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38830025 acatttaggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 38829967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 46410159 - 46410103
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  46410159 atttaggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 46410103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 23323527 - 23323476
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  23323527 ggccccgtttggataaacagcttatatagatgcttatagcattaaagcttat 23323476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 32672546 - 32672497
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  32672546 ccccgtttggataaacaacttatatagatgcttatagcattagagcttat 32672497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 7146561 - 7146505
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  7146561 atttaggccccgtttggataaacagcttatatagatgcttatagtattagggcttat 7146505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 20097586 - 20097530
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  20097586 atttaggccccgtttggataaacagcttatatagatgcttataacattagtgcttat 20097530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 29079392 - 29079344
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  29079392 cccgtttggataaacagcttatatagatgcttatagcattagtgcttat 29079344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 1171411 - 1171360
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| |||||||||||||||||||||||| |||||||    
T  1171411 ggccccgtttggataaacaacttatatagatgcttatagcattatagcttat 1171360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 23318849 - 23318900
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  23318849 ggccccgttttgataaacaatttatatagatgcttatagcattagagcttat 23318900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 25898133 - 25898082
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  25898133 ggccccgtttggataaacagcttatatagatgtttatagcattagtgcttat 25898082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 29288999 - 29288948
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  29288999 ggccccgtttggataaacagcttatatagatgtttatagcattagtgcttat 29288948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 39259698 - 39259749
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  39259698 ggccccgtttggataaacagcttatatagatgcttataacattagtgcttat 39259749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 42369641 - 42369692
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  42369641 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 42369692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 38172664 - 38172615
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||| |||||||||| |||||||| |||||||||||||||||||||||||    
T  38172664 atttaggccccgtttggataaacatcttatatagatgcttatagcattag 38172615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 16053041 - 16052993
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  16053041 ccccgtttggataaacagcttatatagatgcttataacattatagctta 16052993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 46761861 - 46761813
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||||||    
T  46761861 cccgtttggataaacagtttatatagatgtttatagcattagagcttat 46761813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1168710 - 1168761
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| |||||||||||||||||| |||||| ||||||    
T  1168710 ggccccgtttggataaacaacttatatagatgcttataacattagggcttat 1168761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 15718577 - 15718534
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  15718577 ggccccgtttggataaacagcttatatagatgcttataacatta 15718534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 17586687 - 17586738
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||| ||||||    
T  17586687 ggccccatttggataaacaacttatatagatgcttatagcattagggcttat 17586738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 17592580 - 17592529
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  17592580 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 17592529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 26579508 - 26579551
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||||| |||||||| |||||||||||||||||||||||||    
T  26579508 gccccgtttggataaacaacttatatagatgcttatagcattag 26579551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 33511169 - 33511118
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  33511169 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 33511118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 40093394 - 40093343
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||| ||||||||||| ||||||||    
T  40093394 ggccccgtttggataaacaacttatatagatacttatagcattggagcttat 40093343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 41927793 - 41927840
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  41927793 ccgtttggataaacagcttatatagatgcttatagtattatagcttat 41927840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 52752514 - 52752565
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||  ||||| ||||||    
T  52752514 ggccccgtttggataaacagcttatatagatgcttataatattagtgcttat 52752565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 214
Target Start/End: Original strand, 969851 - 969893
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||| |||||||| |||||||||||||||||||||||||    
T  969851 ccccgtttggataaacaacttatatagatgcttatagcattag 969893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 213
Target Start/End: Complemental strand, 8121754 - 8121716
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  8121754 cgtttggataaacagcttatatagatgcttatagcatta 8121716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 13995951 - 13995997
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  13995951 ccgtttggatcaacagcttatatagatgcttataacattagagctta 13995997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 14004065 - 14004111
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  14004065 ccgtttggatcaacagcttatatagatgcttataacattagagctta 14004111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 15203833 - 15203783
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| ||||||||||||||||| ||  ||||||||||||||||||    
T  15203833 ggccccgtttggataaacagcttatataaatatttatagcattagagctta 15203783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 23499301 - 23499255
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||||    
T  23499301 cgtttggataaacagtttatatagatgcttataacattagagcttat 23499255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 6766343 - 6766279
Alignment:
Q  157 aaaaggacattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||  ||| ||||||||||  |||||||  |||||||||||||||||||||||| ||||||    
T  6766343 aaaaggagttttaggccccgtttgaataaacaatttatatagatgcttatagcattagggcttat 6766279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Complemental strand, 43906435 - 43906395
Alignment:
Q  181 gataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| ||||||||||||||||||||||||| ||||||    
T  43906435 gataaacaacttatatagatgcttatagcattagggcttat 43906395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1940246 - 1940297
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| |||||||||||||||||  |||||| ||||||    
T  1940246 ggccccgtttggataaacaacttatatagatgcttatgacattagggcttat 1940297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 2478512 - 2478469
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||    
T  2478512 ggccctgtttggataaacaacttatatagatgcttatagcatta 2478469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 214
Target Start/End: Complemental strand, 26664051 - 26664012
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  26664051 cgtttggataaacaacttatatagatgcttatagcattag 26664012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 52088504 - 52088462
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagag 216  Q
    |||||| |||||||| |||||||||||||||||| ||||||||    
T  52088504 ccgtttggataaacaacttatatagatgcttataacattagag 52088462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 2348620 - 2348575
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||| ||||||||||||||||||| ||||||    
T  2348620 gtttggataagcagcttatgtagatgcttatagcattagggcttat 2348575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 5678643 - 5678595
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||| |||| ||| | |||||||||||||||||||||||    
T  5678643 cccgtttggataaatagctcatagaaatgcttatagcattagagcttat 5678595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 15521540 - 15521489
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15521540 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 15521489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 22175498 - 22175447
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22175498 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 22175447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 50529826 - 50529775
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50529826 ggccccgtttggataaacagcttatatagatgcttatagcattagagcttat 50529775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 29784202 - 29784254
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  29784202 tggccccgtttggataaacagcttatatagatgtttatagcattagagcttat 29784254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 20700028 - 20699977
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  20700028 ggccctgtttggataaacagcttatatagatgcttatagcattagagcttat 20699977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 37697429 - 37697480
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  37697429 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 37697480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 44608809 - 44608859
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  44608809 gccccgtttggataaacagcttatatagatgcttatagcattagaacttat 44608859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 29446410 - 29446358
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  29446410 tggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 29446358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 12116970 - 12117021
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  12116970 ggccctgtttggataaacagcttatatagatgcttatagcattagtgcttat 12117021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 13697609 - 13697558
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  13697609 ggccccgtttggataaacagcttatatagatgcttataacattagggcttat 13697558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 16355418 - 16355367
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  16355418 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 16355367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 21581941 - 21581890
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  21581941 ggccccgtttggataaacagcttatatagatacttatagcattagtgcttat 21581890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 35227240 - 35227193
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  35227240 ccgtttggataaacagcttatatagatgcttatagcattagggcttat 35227193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 42307230 - 42307281
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  42307230 ggccccgtttggataaacatcttatatagatgcttatagcattagtgcttat 42307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 20841674 - 20841724
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  20841674 ggccccgtttggataaacaacttatatagatgcttataacattagagctta 20841724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 36787444 - 36787494
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  36787444 gccccgtttgaataaacagcttatattgatgcttatagcattagagcttat 36787494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 49129968 - 49129922
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  49129968 cgtttggataaacagcttatattgatgcttatagcattagagcttat 49129922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 54533334 - 54533384
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| ||||||||||||||||||||| ||||||| ||||||||||    
T  54533334 ggccccgtttggataaacagcttatatagatgtttatagccttagagctta 54533384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 32245082 - 32245038
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||||| |||||||||||||||||||| |||||||||||||    
T  32245082 ggccccgtttggataaacagcttatatagatacttatagcattag 32245038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 8043574 - 8043523
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  8043574 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 8043523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 15517922 - 15517973
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||| |||||||| |||||| ||||||    
T  15517922 ggccccgtttggataaacagcttatataggtgcttataccattagggcttat 15517973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 26000241 - 26000190
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| ||||||    
T  26000241 ggccccgtttggataaacattttatatagatgcttatagcattagtgcttat 26000190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 34701123 - 34701072
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  34701123 ggcctcgtttggataaacaacttatatagatgcttatagcattagggcttat 34701072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 38856797 - 38856746
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  38856797 ggcccagtttggataaacagcttatatagatgcttatggcattagggcttat 38856746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 38934838 - 38934787
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  38934838 ggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 38934787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 42103546 - 42103589
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  42103546 ggcctcgtttggataaacagcttatatagatgcttatagcatta 42103589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 32360219 - 32360173
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||||||||||||||| |||||||||||| ||||||    
T  32360219 cgtttggataaacagcttatatagatgtttatagcattagggcttat 32360173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 46451650 - 46451695
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  46451650 gtttggataaacagcttatatagatgcttatggcattagggcttat 46451695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 24835355 - 24835403
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| ||||||||||||||||| ||||||||| |||||| ||||||    
T  24835355 cccgtttggataaacagcttatataaatgcttataacattagggcttat 24835403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 44689719 - 44689671
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||| |||||||||||||||||||| |||| ||||||    
T  44689719 cccgtttggataaacaacttatatagatgcttatagccttagggcttat 44689671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 25493724 - 25493767
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||    
T  25493724 ggcctcgtttggataaacaacttatatagatgcttatagcatta 25493767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 26123558 - 26123512
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||| ||||| |||||||||||| |||||| ||||||    
T  26123558 cgtttagataaacaacttatgtagatgcttataacattagggcttat 26123512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 220
Target Start/End: Complemental strand, 52922336 - 52922298
Alignment:
Q  182 ataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  52922336 ataaacaacttatattgatgcttatagcattagagctta 52922298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 53029008 - 53028963
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||| |||||||||||| |||||||||||| ||||||    
T  53029008 gtttggataaacaacttatatagatgtttatagcattagggcttat 53028963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 6085933 - 6085990
Alignment:
Q  164 cattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  6085933 cattatggccccgtttggataaacagcttatatagatgcttataacattagagcttat 6085990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 34887180 - 34887128
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  34887180 tggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 34887128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 53798 - 53747
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  53798 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 53747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 16306470 - 16306521
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  16306470 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 16306521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 33465257 - 33465201
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||| |||||    
T  33465257 attttggccccgtttgaataaacaacttatatagatgcttatagcattagaacttat 33465201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 9460503 - 9460452
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||| ||||||||| |||||||||    
T  9460503 ggccccgtttggataaacagcttatatagatgtttatagcatcagagcttat 9460452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 10551092 - 10551041
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  10551092 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 10551041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 18614435 - 18614384
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  18614435 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 18614384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 26703656 - 26703707
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  26703656 ggccccgtttggataaacagcttatataggtgcttatagcattagtgcttat 26703707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 3955122 - 3955168
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  3955122 cgtttggataaacagcttatatagatgcttatagcattagtgcttat 3955168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 30691800 - 30691849
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||| ||||| |||| ||||||||||||||||||||||||||||||||||    
T  30691800 atttaggccctgtttggataaacagcttatatagatgcttatagcattag 30691849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 26946374 - 26946422
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||    
T  26946374 cccgtttggataaacagcttatattgatacttatagcattagagcttat 26946422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 20727499 - 20727448
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||| ||||||    
T  20727499 ggccccgtttggataaacaacttatatagatgcttatggcattagggcttat 20727448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 2838450 - 2838408
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||| ||||||||||||||||||||| ||||||||||||    
T  2838450 ccccgtttggataaacagcttatatagatgtttatagcattag 2838408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 3346832 - 3346881
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||||    
T  3346832 atttaggccacgtttggataaacaacttatatagatgcttatagcattag 3346881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 35199006 - 35198958
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||| |||||||||||||||||||||||||||  |||| ||||||    
T  35199006 ccccgtttggataaacagcttatatagatgcttataatattatagctta 35198958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 221
Target Start/End: Original strand, 17260382 - 17260421
Alignment:
Q  182 ataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||| |||||||||||| ||||||||||||    
T  17260382 ataaacagcttataaagatgcttatagaattagagcttat 17260421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 30692735 - 30692684
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| |||||||||||||||| | |||||| ||||||    
T  30692735 ggccccgtttggataaacaacttatatagatgcttaaaacattagtgcttat 30692684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 23073674 - 23073714
Alignment:
Q  181 gataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| |||||||||||||||||| |||||||| ||||    
T  23073674 gataaacaacttatatagatgcttataacattagagtttat 23073714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 39636242 - 39636197
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39636242 gtttagataaacagcttatatagatgcttatagcattagagcttat 39636197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 33905284 - 33905335
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  33905284 ggccccgtttggataaacagcttatatagatgcttatagcattagggcttat 33905335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 19900651 - 19900708
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| ||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  19900651 acatttaggctccgtttggataaacaacttatatagatgcttatagcattagagctta 19900708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 12517444 - 12517392
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| ||||||||||||||| | |||||||||||||||||||||||    
T  12517444 tggccccgtttggataaacagcttatacaaatgcttatagcattagagcttat 12517392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 851804 - 851753
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  851804 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 851753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1481269 - 1481320
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  1481269 ggccccgtttggataaacaacttatatagattcttatagcattagagcttat 1481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 3872476 - 3872527
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  3872476 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 3872527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 26322516 - 26322567
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  26322516 ggccccgtttggataaacagcttatatagatgcttataggattagggcttat 26322567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 221
Target Start/End: Original strand, 19383343 - 19383397
Alignment:
Q  167 tttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| |||| |||||||| ||||||| ||||||||||||||||||||||||    
T  19383343 tttggccctgtttggataaacaacttatatggatgcttatagcattagagcttat 19383397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 28323012 - 28323058
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  28323012 cgtttggataaacagcttatatagatgcttatagcattagtgcttat 28323058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 31516566 - 31516607
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  31516566 cccgtttggataaacagcttatatagatgcttatagcattag 31516607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 5734290 - 5734242
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  5734290 cccgtttggataaacaacttatatagatgcttatagcattagggcttat 5734242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 18806112 - 18806164
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  18806112 tggccctgtttggataaacaacttatatagatgcttatagcattagggcttat 18806164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 42938687 - 42938639
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||| |||||||||||||||||||||||||||| |||||    
T  42938687 cccgtttggataaatagcttatatagatgcttatagcattagaacttat 42938639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 1110191 - 1110140
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||||||||||||||||||||| ||| || ||||||    
T  1110191 ggccccgtttggataaacagcttatatagatgcttataacatcagggcttat 1110140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 12516397 - 12516448
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| ||| ||||||||||||||| | |||||||||||||||||||||||    
T  12516397 ggccccttttggataaacagcttatacaaatgcttatagcattagagcttat 12516448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 2178132 - 2178178
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  2178132 ccgtttggataaacaacttatatagatgtttatagcattagagctta 2178178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 4231658 - 4231704
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||||    
T  4231658 ccgtttggataaacaacttatatagatgcttatatcattagagctta 4231704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 16065740 - 16065778
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  16065740 cgtttggataaacagcttatatagatgcttatagcatta 16065778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 30419419 - 30419469
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| ||| |||| | |||||||||||||||||||||||||||||    
T  30419419 ggccccgtttggatgaacaacatatatagatgcttatagcattagagctta 30419469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 39463916 - 39463863
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttattg 223  Q
    |||||||||| ||||||||| ||||| | |||||| ||||||||||||||||||    
T  39463916 ggccccgtttggataaacaggttatacatatgcttgtagcattagagcttattg 39463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 42445088 - 42445133
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||    
T  42445088 gtttggataaacagcttatattgatgtttatagcattagagcttat 42445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 221
Target Start/End: Original strand, 16588296 - 16588326
Alignment:
Q  191 ttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||||||||||||||||||||    
T  16588296 ttatatagatgcttatagcattagagcttat 16588326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 1679448 - 1679407
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||| |||||||| |||||||||||| ||||||||||||    
T  1679448 cccgtttggataaacatcttatatagatgtttatagcattag 1679407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Original strand, 6174322 - 6174366
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||||||| |||||| || |||||||||||||||||| |||||    
T  6174322 ggccccgtttggataaatagtttatatagatgcttatagtattag 6174366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 30265973 - 30266029
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| || ||||| ||||||||  | ||||||||||||||||||||    
T  30265973 atttaggccccgtttggacaaacaacttatatatttacttatagcattagagcttat 30266029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 15730505 - 15730449
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  15730505 atttaggccccgtttggataaacaacttatatagatgcttatagcattagagcttat 15730449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 10830656 - 10830707
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  10830656 ggccccgtttggataaacagtttatatagatgcttatagcattagagcttat 10830707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 18595444 - 18595393
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  18595444 ggccccgtttggataaacagcttatatagatgcttatagcattagtgcttat 18595393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 44804183 - 44804234
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  44804183 ggccccgtttagataaacagcttatatagatgcttatagcatcagggcttat 44804234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 221
Target Start/End: Complemental strand, 883488 - 883439
Alignment:
Q  172 ccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  883488 ccccgtttggataaatagcttatatagatgcttatagcattagagcttat 883439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 4716684 - 4716627
Alignment:
Q  164 cattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  4716684 catttaggccccgtttggataaacagcttatatagatgcttatagcatgagggcttat 4716627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 2041793 - 2041849
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  2041793 atttaggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 2041849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 14423638 - 14423590
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  14423638 atttaggccccgtttggataaacagcttatatagatgcttatagcatta 14423590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 22259926 - 22259978
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||    
T  22259926 tggctccgtttggataaacagcttatatagatgcttatagcattagggcttat 22259978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 39219502 - 39219454
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  39219502 cccgtttggataaacagcttatatagatgcttatagcattagggcttat 39219454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 24112477 - 24112528
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  24112477 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 24112528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 26782015 - 26782066
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  26782015 ggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 26782066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 34678956 - 34679007
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  34678956 ggccccgtttggataaacagcttatatagatgcttatggcattagggcttat 34679007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 35117502 - 35117553
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  35117502 ggcctcgtttggataaacagcttatatagatgcttatagcattagggcttat 35117553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 36494963 - 36494915
Alignment:
Q  166 ttttggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  36494963 ttttgggcccgtttggataaacagcttatatagatgcgtatagcattag 36494915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 40116672 - 40116728
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||| ||||| ||| |||| ||||||||||||||||||||||||||||||||    
T  40116672 atttaggcctcgtttggattaacaacttatatagatgcttatagcattagagcttat 40116728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 4036553 - 4036506
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  4036553 ccgtttggataaacagcttatatagatgcttatggcattagtgcttat 4036506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 6143773 - 6143824
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  6143773 ggccctgtttggataaacagcttatatagatgcttatggcattagggcttat 6143824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 33286439 - 33286490
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| |||||||||||| |||||||||||| ||||||    
T  33286439 ggccccgttttgataaacaacttatatagatgtttatagcattagggcttat 33286490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 220
Target Start/End: Complemental strand, 42572313 - 42572266
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  42572313 cccgtttggataaacagtttatatagatacttatagcattagagctta 42572266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 34998168 - 34998226
Alignment:
Q  163 acattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| || ||||||| |||||||| |||||||||||||||||| ||||||| |||||    
T  34998168 acatttaggtcccgtttggataaacaacttatatagatgcttatatcattagaccttat 34998226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 9808000 - 9807955
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  9808000 gtttggataaacagcttatatagatgcttatggcattagggcttat 9807955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 38166235 - 38166276
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||| ||||||||||||||||||||| ||||||||||||    
T  38166235 cccgtttggataaacagcttatatagatgtttatagcattag 38166276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 34841838 - 34841874
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagca 210  Q
    |||||| ||||||||||||||||||||||||||||||    
T  34841838 ccgtttggataaacagcttatatagatgcttatagca 34841874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 39222204 - 39222156
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||| ||||| |||| |||||||||||| ||||||||||||||||||||    
T  39222204 atttaggccctgtttggataaacagcttgtatagatgcttatagcatta 39222156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 41576302 - 41576258
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||    
T  41576302 ggccccgtttgcataaacagtttatatagatgcttatagcattag 41576258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 6082907 - 6082954
Alignment:
Q  174 ccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||| |||||| |||||||||| |||||||||||||||| ||||||    
T  6082907 ccgtttggataaatagcttatataaatgcttatagcattagggcttat 6082954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 18684936 - 18684893
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||||||||| |||||| |||||||| |||||||||||||||||    
T  18684936 ggccccgtttggataaatagcttatagagatgcttatagcatta 18684893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 18730501 - 18730458
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||||||||| |||||| |||||||| |||||||||||||||||    
T  18730501 ggccccgtttggataaatagcttatagagatgcttatagcatta 18730458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 29939269 - 29939218
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||| |||||||| |||||||||||||||||| |||||| ||||||    
T  29939269 ggccctgttttgataaacaacttatatagatgcttataacattagggcttat 29939218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 221
Target Start/End: Original strand, 2320503 - 2320548
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||    
T  2320503 gtttagataaataacttatattgatgcttataacattagagcttat 2320548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 5015294 - 5015254
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    ||||||| ||||||||  |||||||||||||||||||||||    
T  5015294 cccgtttggataaacaatttatatagatgcttatagcatta 5015254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 8022420 - 8022384
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttat 206  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  8022420 ggccctgtttggataaacagcttatatagatgcttat 8022384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 173 - 221
Target Start/End: Complemental strand, 33992104 - 33992056
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33992104 cccgtttggataaacagcttatatagatgcttatagcattagagcttat 33992056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 220
Target Start/End: Complemental strand, 16070327 - 16070272
Alignment:
Q  165 attttggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  16070327 atttaggccccgtttggataaacagcttatatagatgcttataacattagagctta 16070272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 27421570 - 27421519
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  27421570 ggccccgtttagataaacagcttatatagatgcttatggcattagggcttat 27421519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 41817996 - 41818047
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  41817996 tggccccgtttggataaacagcttatatagatgcttataacattagagctta 41818047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 26602280 - 26602337
Alignment:
Q  164 cattttggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  26602280 catttaggccccgtttggataaacaacttatatagatgcttatagcattagggcttat 26602337  T

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Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 19360868 - 19360817
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  19360868 ggccccgtttggataaacaatttatatagatgcttatagcattagagcttat 19360817  T

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Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 8373600 - 8373650
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  8373600 gccccgtttggataaacaacttatatagatgcttatatcattagagcttat 8373650  T

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Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 35419918 - 35419968
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagctta 220  Q
    |||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  35419918 ggccccgtttggataaacagcttatatagatgcttatggcattagggctta 35419968  T

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Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 33490503 - 33490544
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattag 214  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  33490503 cccgtttggataaacagcttatatagatgcttatagcattag 33490544  T

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Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 24104961 - 24105009
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||    
T  24104961 cccgtttggataaacagtttatatagatgcttatagcattagtgcttat 24105009  T

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Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 27678492 - 27678544
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||| |||||||| |||||||||||| |||||||||||| ||||||    
T  27678492 tggccccgtttggataaacaacttatatagatgtttatagcattagtgcttat 27678544  T

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Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 9007292 - 9007343
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  9007292 ggccccgtttggataaacaacttatatagatgcttatagtattagggcttat 9007343  T

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Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 19515495 - 19515546
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||| |||||||| || ||||||||||||||||||||||    
T  19515495 ggccccgtttggataaatagcttatacaggtgcttatagcattagagcttat 19515546  T

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Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 27025897 - 27025846
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||||||  |||||||||||||||||||| |||||||||||| ||||||    
T  27025897 ggccccgtttgaataaacagcttatatagatgtttatagcattagggcttat 27025846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 38597158 - 38597209
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||| |||||| |||||||||||| ||||||    
T  38597158 ggccccgtttggataaacagcttatttagatgtttatagcattagggcttat 38597209  T

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Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 31884085 - 31884039
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| ||||||||||||||||| ||||||||||||||||| |||||    
T  31884085 cgtttggataaacagcttatataaatgcttatagcattagaacttat 31884039  T

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Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 34708283 - 34708329
Alignment:
Q  175 cgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  34708283 cgtttggataaacagcttatatagatgcttatagtattagtgcttat 34708329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 221
Target Start/End: Original strand, 16736638 - 16736686
Alignment:
Q  173 cccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    ||||||| |||||||||||||||||| ||||||| ||||||| ||||||    
T  16736638 cccgtttggataaacagcttatataggtgcttatggcattagggcttat 16736686  T

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Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 35419631 - 35419683
Alignment:
Q  169 tggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||||| ||||||||| ||||||||||||||||| |||||| ||||||    
T  35419631 tggctccgtttggataaacagtttatatagatgcttataacattagggcttat 35419683  T

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Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 1165052 - 1165095
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcatta 213  Q
    |||| ||||| |||||||| ||||||||||||||||||||||||    
T  1165052 ggcctcgtttggataaacaacttatatagatgcttatagcatta 1165095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 1579739 - 1579701
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  1579739 gtttggataaacagcttatatagatgcttatggcattag 1579701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 1605076 - 1605114
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattag 214  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  1605076 gtttggataaacagcttatatagatgcttatggcattag 1605114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0920 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 222 - 171
Alignment:
Q  170 ggccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| ||||||    
T  222 ggccccgtttggataaacagcttatatagatgcttatagtattagggcttat 171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 221
Target Start/End: Original strand, 18256 - 18306
Alignment:
Q  171 gccccgtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| |||| |||||||||||||||||||||||||| ||||||| ||||||    
T  18256 gccctgtttggataaacagcttatatagatgcttatggcattagggcttat 18306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 181 - 136
Alignment:
Q  176 gtttagataaacagcttatatagatgcttatagcattagagcttat 221  Q
    |||| ||||||||||||||||||||| |||||||||||| ||||||    
T  181 gtttggataaacagcttatatagatgtttatagcattagggcttat 136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 165 - 221
Target Start/End: Complemental strand, 11072 - 11014
Alignment:
Q  165 attttggccccgtttagataaacagcttatata--gatgcttatagcattagagcttat 221  Q
    |||| ||| |||||| |||||||| ||||||||  ||||||||||||||||||||||||    
T  11072 atttaggctccgtttggataaacaacttatatatagatgcttatagcattagagcttat 11014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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