View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4154_low_52 (Length: 228)
Name: NF4154_low_52
Description: NF4154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4154_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 28518299 - 28518495
Alignment:
| Q |
17 |
taggctccatatgtgacattgacttatgttatggatagacttagaaattcttaatctttcttacaagctttctctaccaaaaccttgattatttttatgc |
116 |
Q |
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| T |
28518299 |
taggctccatatgtgacattgacttatgttatggatagacttagaaattcttaatctttcttacaagctttctccaccaaaaccttgattatttttatgc |
28518398 |
T |
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| Q |
117 |
tagaagcaaacaagttgcaagtaataactcattcatttggtaactttcaaatggtatatataaacttcttagagtctgtttttggcaa-gttaaatt |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
28518399 |
tagaagcaaacaagttgcaagtaataactcattcatttggtaactttcaaatggtatatataaacttcttagagtctgtttttggcaatgttaaatt |
28518495 |
T |
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