View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4155_low_1 (Length: 767)

Name: NF4155_low_1
Description: NF4155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4155_low_1
NF4155_low_1
[»] chr5 (22 HSPs)
chr5 (358-749)||(36016821-36017213)
chr5 (136-362)||(42061482-42061708)
chr5 (138-358)||(31862872-31863092)
chr5 (138-358)||(28441961-28442181)
chr5 (119-358)||(22937816-22938055)
chr5 (134-360)||(37214764-37214990)
chr5 (136-365)||(32837076-32837305)
chr5 (136-358)||(43490793-43491015)
chr5 (230-358)||(14376706-14376834)
chr5 (134-246)||(21336497-21336609)
chr5 (134-246)||(21827796-21827908)
chr5 (249-358)||(14016927-14017036)
chr5 (137-358)||(28788179-28788401)
chr5 (138-243)||(39191446-39191551)
chr5 (141-221)||(14376638-14376717)
chr5 (125-358)||(40916654-40916889)
chr5 (249-358)||(17747617-17747726)
chr5 (267-358)||(21336650-21336742)
chr5 (134-193)||(21333481-21333540)
chr5 (249-327)||(7624288-7624366)
chr5 (267-358)||(21827949-21828041)
chr5 (294-358)||(7270241-7270305)
[»] chr7 (18 HSPs)
chr7 (358-749)||(28888656-28889049)
chr7 (136-358)||(26556510-26556732)
chr7 (136-358)||(10431386-10431608)
chr7 (136-360)||(2442056-2442279)
chr7 (134-358)||(4542074-4542297)
chr7 (136-358)||(8276012-8276234)
chr7 (134-358)||(45291249-45291474)
chr7 (249-359)||(16164888-16164998)
chr7 (249-358)||(48644616-48644725)
chr7 (134-358)||(45287913-45288138)
chr7 (249-358)||(6602621-6602730)
chr7 (274-358)||(48645837-48645921)
chr7 (248-360)||(20081530-20081642)
chr7 (260-358)||(17729973-17730071)
chr7 (209-358)||(9865493-9865642)
chr7 (20-120)||(22908883-22908981)
chr7 (208-308)||(9273885-9273984)
chr7 (329-358)||(13450736-13450765)
[»] chr8 (22 HSPs)
chr8 (19-358)||(10663011-10663350)
chr8 (134-354)||(25595460-25595681)
chr8 (134-358)||(33878014-33878238)
chr8 (134-360)||(18722086-18722312)
chr8 (134-354)||(25592275-25592496)
chr8 (136-358)||(43682575-43682798)
chr8 (134-358)||(45156694-45156918)
chr8 (119-358)||(5540757-5540995)
chr8 (136-308)||(25228064-25228234)
chr8 (161-360)||(14420862-14421061)
chr8 (118-243)||(17895277-17895403)
chr8 (249-358)||(14589707-14589816)
chr8 (137-231)||(20520079-20520173)
chr8 (249-358)||(22174782-22174891)
chr8 (277-361)||(23612566-23612650)
chr8 (249-360)||(18826725-18826836)
chr8 (138-243)||(30640624-30640729)
chr8 (134-192)||(23612745-23612803)
chr8 (267-358)||(19792926-19793019)
chr8 (248-321)||(38249248-38249321)
chr8 (267-359)||(30640504-30640598)
chr8 (20-88)||(4862247-4862316)
[»] chr4 (42 HSPs)
chr4 (125-358)||(33410729-33410962)
chr4 (136-358)||(18910604-18910826)
chr4 (138-358)||(5669628-5669848)
chr4 (134-358)||(3798572-3798796)
chr4 (136-358)||(5721749-5721971)
chr4 (125-359)||(19865410-19865644)
chr4 (134-359)||(15431163-15431388)
chr4 (134-359)||(15437777-15438002)
chr4 (118-357)||(19861047-19861286)
chr4 (136-358)||(9716951-9717173)
chr4 (134-358)||(12237354-12237578)
chr4 (134-358)||(49269735-49269958)
chr4 (119-308)||(40617573-40617762)
chr4 (134-358)||(5680469-5680693)
chr4 (124-321)||(53093758-53093954)
chr4 (136-360)||(37104039-37104243)
chr4 (250-358)||(56198029-56198137)
chr4 (249-359)||(56194721-56194831)
chr4 (249-360)||(47114774-47114885)
chr4 (253-358)||(15405793-15405898)
chr4 (249-359)||(33926120-33926230)
chr4 (249-360)||(44809795-44809906)
chr4 (249-358)||(29323979-29324088)
chr4 (240-358)||(14571026-14571144)
chr4 (125-192)||(27013396-27013463)
chr4 (252-353)||(34320738-34320839)
chr4 (267-358)||(3718336-3718427)
chr4 (267-358)||(27013229-27013321)
chr4 (267-361)||(12782103-12782197)
chr4 (249-317)||(15812973-15813041)
chr4 (139-320)||(48014721-48014894)
chr4 (270-358)||(44164001-44164090)
chr4 (267-358)||(15430674-15430766)
chr4 (267-358)||(15437288-15437380)
chr4 (267-350)||(21418987-21419070)
chr4 (267-358)||(27677874-27677966)
chr4 (267-350)||(40794200-40794283)
chr4 (267-358)||(19826701-19826793)
chr4 (267-321)||(37741471-37741525)
chr4 (289-358)||(52007362-52007431)
chr4 (267-359)||(27691933-27692026)
chr4 (320-358)||(17669447-17669485)
[»] chr3 (39 HSPs)
chr3 (134-358)||(52198305-52198529)
chr3 (136-358)||(18645519-18645741)
chr3 (136-359)||(538014-538237)
chr3 (134-358)||(23299329-23299553)
chr3 (134-359)||(6921889-6922114)
chr3 (136-358)||(10884018-10884240)
chr3 (136-358)||(10107405-10107614)
chr3 (136-358)||(16185434-16185656)
chr3 (134-358)||(35411676-35411901)
chr3 (118-243)||(6445421-6445547)
chr3 (254-358)||(17532565-17532669)
chr3 (134-359)||(53814970-53815196)
chr3 (118-243)||(28265115-28265241)
chr3 (119-221)||(55032698-55032800)
chr3 (179-336)||(22994413-22994570)
chr3 (133-350)||(54736626-54736842)
chr3 (249-358)||(19302255-19302364)
chr3 (118-187)||(9392059-9392128)
chr3 (138-358)||(54460367-54460596)
chr3 (134-198)||(17532493-17532557)
chr3 (208-358)||(29344622-29344773)
chr3 (230-274)||(55032789-55032833)
chr3 (267-357)||(9380012-9380102)
chr3 (20-120)||(23193691-23193789)
chr3 (248-358)||(3839790-3839903)
chr3 (268-358)||(34984668-34984758)
chr3 (138-192)||(8462338-8462392)
chr3 (267-358)||(16243166-16243257)
chr3 (256-308)||(19305445-19305497)
chr3 (289-360)||(20729407-20729479)
chr3 (191-246)||(9380143-9380198)
chr3 (267-321)||(11636146-11636199)
chr3 (267-358)||(41976321-41976412)
chr3 (268-307)||(17529546-17529585)
chr3 (320-358)||(10962428-10962466)
chr3 (320-358)||(10965937-10965975)
chr3 (271-359)||(10880775-10880863)
chr3 (329-358)||(31857055-31857084)
chr3 (329-358)||(42355307-42355336)
[»] scaffold0035 (1 HSPs)
scaffold0035 (134-367)||(61588-61821)
[»] chr1 (16 HSPs)
chr1 (134-360)||(49499344-49499570)
chr1 (136-358)||(2793299-2793521)
chr1 (134-360)||(1951121-1951347)
chr1 (136-358)||(29644086-29644308)
chr1 (124-359)||(34733030-34733263)
chr1 (249-358)||(31204014-31204123)
chr1 (136-359)||(42021720-42021945)
chr1 (249-358)||(45961598-45961707)
chr1 (249-357)||(27537104-27537212)
chr1 (249-358)||(6071791-6071895)
chr1 (260-358)||(41059135-41059234)
chr1 (271-358)||(2404722-2404809)
chr1 (329-359)||(22460414-22460444)
chr1 (320-358)||(47708779-47708817)
chr1 (282-319)||(7634926-7634963)
chr1 (329-358)||(22454290-22454319)
[»] chr2 (23 HSPs)
chr2 (134-359)||(36809211-36809436)
chr2 (134-358)||(38006062-38006286)
chr2 (134-358)||(25873203-25873427)
chr2 (136-358)||(26358672-26358894)
chr2 (134-359)||(25821693-25821923)
chr2 (134-359)||(25869834-25870059)
chr2 (138-359)||(30275472-30275692)
chr2 (119-358)||(25139801-25140040)
chr2 (230-358)||(15466170-15466298)
chr2 (137-358)||(16788389-16788609)
chr2 (136-363)||(29439592-29439797)
chr2 (249-355)||(36985626-36985732)
chr2 (249-358)||(45456300-45456409)
chr2 (249-358)||(45453051-45453160)
chr2 (134-225)||(10600096-10600187)
chr2 (249-358)||(38014636-38014745)
chr2 (249-358)||(31430529-31430638)
chr2 (249-313)||(31428340-31428404)
chr2 (267-358)||(10599951-10600042)
chr2 (289-363)||(5665825-5665899)
chr2 (125-175)||(30925934-30925984)
chr2 (267-358)||(3874482-3874573)
chr2 (267-356)||(13136764-13136853)
[»] chr6 (20 HSPs)
chr6 (134-354)||(23379589-23379810)
chr6 (134-359)||(23388928-23389154)
chr6 (119-358)||(5738950-5739190)
chr6 (134-358)||(9953036-9953260)
chr6 (136-358)||(34501416-34501636)
chr6 (136-357)||(2371414-2371635)
chr6 (249-358)||(31071494-31071603)
chr6 (249-324)||(13004433-13004509)
chr6 (260-321)||(12991556-12991617)
chr6 (267-358)||(10289186-10289277)
chr6 (251-321)||(6512433-6512503)
chr6 (267-321)||(13022190-13022244)
chr6 (30-120)||(23007502-23007593)
chr6 (30-120)||(23780771-23780862)
chr6 (249-317)||(28112641-28112709)
chr6 (289-358)||(28666107-28666176)
chr6 (209-241)||(13004611-13004643)
chr6 (267-318)||(11193450-11193501)
chr6 (276-321)||(5259114-5259159)
chr6 (329-358)||(12981159-12981188)
[»] scaffold0005 (2 HSPs)
scaffold0005 (136-347)||(290974-291185)
scaffold0005 (240-358)||(246232-246350)
[»] scaffold0080 (1 HSPs)
scaffold0080 (136-277)||(26326-26467)
[»] scaffold0334 (1 HSPs)
scaffold0334 (234-367)||(18454-18588)
[»] scaffold0015 (1 HSPs)
scaffold0015 (136-362)||(197238-197453)
[»] scaffold0045 (1 HSPs)
scaffold0045 (252-359)||(88964-89071)
[»] scaffold1684 (1 HSPs)
scaffold1684 (253-358)||(369-474)
[»] scaffold0270 (3 HSPs)
scaffold0270 (134-360)||(4195-4422)
scaffold0270 (134-360)||(11325-11552)
scaffold0270 (134-358)||(835-1060)
[»] scaffold0381 (2 HSPs)
scaffold0381 (125-192)||(6320-6387)
scaffold0381 (267-358)||(6462-6554)
[»] scaffold0757 (1 HSPs)
scaffold0757 (267-359)||(4562-4654)
[»] scaffold0009 (1 HSPs)
scaffold0009 (267-320)||(38809-38862)
[»] scaffold0520 (1 HSPs)
scaffold0520 (268-358)||(4790-4880)
[»] scaffold0567 (1 HSPs)
scaffold0567 (320-358)||(7017-7055)


Alignment Details
Target: chr5 (Bit Score: 338; Significance: 0; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 358 - 749
Target Start/End: Complemental strand, 36017213 - 36016821
Alignment:
Q  358 aatgatcaaccagcttttagacattgatcatcatgtgtcttttatagttcatctgaccatagctcaattgttaaactgtcagattttatattaattcaac 457  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  36017213 aatgatcaaccagcttttagacattgatcatcatgtgtcttttatagttcatctgactatagctcaattgttaaactatcagattttatattaattcaac 36017114  T
Q  458 gattgatctatggtcagatgatctatagagac--gaagaatctaaacaacatattctnnnnnnnttgtactttcaatagtcctgctgtggaggaaacatt 555  Q
    ||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||       |||||||||||||||||||||| |||||||||||||    
T  36017113 gattgatctatggtcagatgatctatagagacatgaagaatccaaacaacatattctaaaaaaattgtactttcaatagtcctgctctggaggaaacatt 36017014  T
Q  556 gacaattgttggagaagtggatagttgaagaagaggaacaagagcttcagttactctttctactccatagaagtttgttttcaaacatttttcagctaac 655  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36017013 gacaattgttggagaagtggatagttgaagaagaggaacaagagcttcagttactctttctactccatagaagtttgttttcaaacatttttcagctaac 36016914  T
Q  656 tcataggtttcataccctaattccttggtatcaatttctgctccatttctctacaataaattcatatgttatatattattcacttgttagtcct 749  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016913 tcataggtttcataccct-attccttggtatcaatttctgctccatttctctacaataaattcatatgttatatattattcacttgttagtcct 36016821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 136 - 362
Target Start/End: Complemental strand, 42061708 - 42061482
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||| |||||||||||| | ||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  42061708 cctaaaatcatgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacgttttcaacaatcgt 42061609  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42061608 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 42061509  T
Q  336 tagtgaatgactgactgtcatcaatga 362  Q
     ||||||||||||||||||||||||||    
T  42061508 cagtgaatgactgactgtcatcaatga 42061482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 31863092 - 31862872
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    |||||||||||||||||||| ||||||||||||| ||||| ||||||||| ||||| |||| |||||||  |||||||||||||||||||||||||||||    
T  31863092 taaaatcgtgtcacgaaatagccatcgtgacacgatttaaacaatgtcgaatgaacttcatcatgtgctctaaatcgtgacacgttttcaacaatcgtga 31862993  T
Q  238 cacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaata 337  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  31862992 cacgattttgctttcttcaaaattttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaatattatgaaaatgacactaaaaata 31862893  T
Q  338 gtgaatgactgactgtcatca 358  Q
      |||||||||||||||||||    
T  31862892 aggaatgactgactgtcatca 31862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 138 - 358
Target Start/End: Original strand, 28441961 - 28442181
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||| || ||||||||||  ||||||  |||||||||||||||||||||||||||||    
T  28441961 taaaatcgtgtcacgaaatagccatcatgacacgttttagccaatgttgagtgaacctcatcctgtgctctaaatcgtgacacgttttcaacaatcgtga 28442060  T
Q  238 cacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaata 337  Q
    ||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  28442061 cacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaata 28442160  T
Q  338 gtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||    
T  28442161 gtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 22937816 - 22938055
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||  |||||| ||||||||||     
T  22937816 acttccaaattagggttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctccaaatcgtgat 22937915  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatca 317  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||  ||||||||    
T  22937916 acgttttcaacaaccgtggcacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatca 22938015  T
Q  318 tgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    | |||| ||| |||||||    ||||||| |||||||||||    
T  22938016 t-aaaaagactctaaaaacgtggaatgacagactgtcatca 22938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 134 - 360
Target Start/End: Complemental strand, 37214990 - 37214764
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||  |||||| |||||||||||| ||||||||||||     
T  37214990 ttcctaaaatcgtgtcacgaaatagccatcatgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacatgttttcaacaatt 37214891  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    |||| |||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| ||||    
T  37214890 gtgatacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaa 37214792  T
Q  333 aaatagtgaatgactgactgtcatcaat 360  Q
    ||||   ||||||| |||||| ||||||    
T  37214791 aaatgtggaatgacagactgttatcaat 37214764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 136 - 365
Target Start/End: Complemental strand, 32837305 - 32837076
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||| |||| |||||  | |||| |||||||||||||||||||||||||| |    
T  32837305 cctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaaactcatcctatgctccaaatcgtgacacgttttcaacaatcat 32837206  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| ||||||    
T  32837205 gacacgattttgctttcttcaaaatcttctatttttctttcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaa 32837107  T
Q  335 atagtgaatgactgactgtcatcaatgatca 365  Q
    ||   |||||||  |||||||||||| ||||    
T  32837106 atgtggaatgacatactgtcatcaatcatca 32837076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 43491015 - 43490793
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||| ||||||||  |||||||| ||||||||||||||| | | ||||||||||  |||||| | ||||||||||||||||||||||||||    
T  43491015 cctaaaatcgtgttacgaaatagacatcgtgatacgttttaaccaatgccaaatgaacctcatcctgtgctcctaatcgtgacacgttttcaacaatcgt 43490916  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||| ||||||||||  ||||||||| |||| ||| ||||||    
T  43490915 gacacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgtttgtgaactcaaaaatatcat-aaaaagactctaaaa 43490817  T
Q  335 atagtg-aatgactgactgtcatca 358  Q
    || ||| |||||| |||||||||||    
T  43490816 at-gtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 230 - 358
Target Start/End: Original strand, 14376706 - 14376834
Alignment:
Q  230 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacac 329  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  14376706 aatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgatttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacac 14376805  T
Q  330 taaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||||||    
T  14376806 taaaaatagtgaatgactgactgtcatca 14376834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 21336497 - 21336609
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  ||||||  ||||||||||| ||||||||||| |    
T  21336497 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctctaaatcgtgacatgttttcaacaacc 21336596  T
Q  234 gtgacacgatttt 246  Q
    |||||||||||||    
T  21336597 gtgacacgatttt 21336609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 134 - 246
Target Start/End: Original strand, 21827796 - 21827908
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||| |  |||||||||||||| |||||||| |    
T  21827796 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttctaaatcgtgacacgtattcaacaacc 21827895  T
Q  234 gtgacacgatttt 246  Q
    |||||||||||||    
T  21827896 gtgacacgatttt 21827908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 14016927 - 14017036
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  14016927 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 14017025  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  14017026 gactgtcatca 14017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 137 - 358
Target Start/End: Original strand, 28788179 - 28788401
Alignment:
Q  137 ctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaatcgt 235  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||  | || | |||||||||||||| ||||||  |||| |    
T  28788179 ctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcatcctatgttccaaatcgtgacacgtttttcagtaatcat 28788278  T
Q  236 gacacgattttgctttcttcaaaatcttc-tatttttcttgctttctttgttgtttaagcttgcttgtgaact-cgaaatatcatgaaaatgacactaaa 333  Q
    ||||||| |   || | ||||   |||||  |||||||||| |||  ||| || |||||||||||||||||||   ||||||||| |||| ||| |||||    
T  28788279 gacacga-tgccctcttttcagtttcttcagatttttcttgtttttcttgctgcttaagcttgcttgtgaactaaaaaatatcat-aaaaagactctaaa 28788376  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||  ||||||||||||||||||    
T  28788377 aatagcaaatgactgactgtcatca 28788401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 39191551 - 39191446
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    ||||||||||| ||||||||  ||| ||||||||||||||||||| |||| | ||||||||  ||| ||| |||| ||||||||||||||||||||||||    
T  39191551 taaaatcgtgttacgaaatagacattgtgacacgttttaaccaatatcgaataaacctcatcctgtactttaaattgtgacacgttttcaacaatcgtga 39191452  T
Q  238 cacgat 243  Q
    ||||||    
T  39191451 cacgat 39191446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 14376638 - 14376717
Alignment:
Q  141 aatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg 221  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||    
T  14376638 aatcgtgtcacgaaatagccatcgtgacacgttttaa-caatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacg 14376717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 125 - 358
Target Start/End: Original strand, 40916654 - 40916889
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacac-gtt 223  Q
    |||||| | ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||  |  ||    ||| |||||||||||||  ||    
T  40916654 aaattaaggttcgtaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaatttcttgaaagctccaaatcgtgacacattt 40916753  T
Q  224 ttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcat--ga 320  Q
    ||||  |||||||||||||  |  | || ||||   |||||  |||||||||||||  |||||| ||||||||||||||||||||  |||||| ||   |    
T  40916754 ttcagtaatcgtgacacga--tcccctttttcagtttcttcggtttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatgataaaa 40916851  T
Q  321 aaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||| ||| ||||||||||  ||||||||||||||||||    
T  40916852 aaaagactctaaaaatagcaaatgactgactgtcatca 40916889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 17747726 - 17747617
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||| ||| ||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  17747726 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagctttcttatgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 17747628  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  17747627 gactgtcatca 17747617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 21336650 - 21336742
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| |||||||||||||||||||| ||| ||| || |||| ||| ||||||||||||||||||||||||||||||    
T  21336650 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatca 21336742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 21333481 - 21333540
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaac 193  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  21333481 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaac 21333540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 7624366 - 7624288
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgac 327  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||| ||| ||||| ||||||||    
T  7624366 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcctgtgaactcaaaacatcattaaaatgac 7624288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 21827949 - 21828041
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  ||| || ||||||||||||| |||||| ||| |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  21827949 tttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 358
Target Start/End: Complemental strand, 7270305 - 7270241
Alignment:
Q  294 cttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||| ||| |||||| |||| ||| |||||||||| ||||||| |||||||||||    
T  7270305 cttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagcgaatgacagactgtcatca 7270241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 358 - 749
Target Start/End: Complemental strand, 28889049 - 28888656
Alignment:
Q  358 aatgatcaaccagcttttagacattgatcatcatgtgtcttttatagttcatctgaccatagctcaattgttaaactgtcagattttatattaattcaac 457  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  28889049 aatgatcaactagcttttagacattgatcatcatgtgtcttttatagttcatctgaccatagttcaattgttaaactatcagattttatattaattcaac 28888950  T
Q  458 gattgatctatggtcagatgatctatagagac--gaagaatctaaacaacatattctnnnnnnnttgtactttcaatagtcctgctgtggaggaaacatt 555  Q
    |||| ||||||||||||||||||||||||||   |||||||| ||||||||||||||       |||||||||||||||||||||| |||||||||||||    
T  28888949 gattaatctatggtcagatgatctatagagatatgaagaatccaaacaacatattctaaaaaaattgtactttcaatagtcctgctctggaggaaacatt 28888850  T
Q  556 gacaattgttggagaagtggatagttgaagaagaggaacaagagcttcagttactctttctactccatagaagtttgttttcaaacatttttcagctaac 655  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28888849 gacaattgttggagaagtggatagttgaagaagaggaacaagagcttctgttactctttctactccatagaagtttgttttcaaacatttttcagctaac 28888750  T
Q  656 tcataggtttcataccctaattccttggtatcaatttctgctccatttctctacaataaattcatatgttatatattattcacttgttagtcct 749  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28888749 tcataggtttcataccctatttccttggtatcaatttctgctccatttctctacaataaattcatatgttatatattattcacttgttagtcct 28888656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 26556732 - 26556510
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||| | |||||||| |||||||  |||||||||||||||||||||||||||    
T  26556732 cctaaaatcgtgtcatgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcatcatgtgctctaaatcgtgacacgttttcaacaatcgt 26556633  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26556632 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 26556533  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||    
T  26556532 tagtgaatgactgactgtcatca 26556510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 10431608 - 10431386
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||  ||||||  |||||||||||||||||||||||||||    
T  10431608 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaatcgtgacacgttttcaacaatcgt 10431509  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    ||||| |||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  10431508 gacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 10431409  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||    
T  10431408 tagtgaatgactgactgtcatca 10431386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 136 - 360
Target Start/End: Original strand, 2442056 - 2442279
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||||| |||||||| |||||||||| ||||| ||||  | ||||||||||||||| |||||||||||||||||    
T  2442056 cctaaaatcgtgtcacgaaatagccatcgtgatacgttttagccaatgtcgagtgaac-tcatcctatgcttcaaatcgtgatacgttttcaacaatcgt 2442154  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    ||||||| ||||||||| ||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  2442155 gacacgaatttgctttcctcagaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacacttaaaa 2442254  T
Q  336 tagtgaatgactgactgtcatcaat 360  Q
    |||||||||||||||||||||||||    
T  2442255 tagtgaatgactgactgtcatcaat 2442279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 4542297 - 4542074
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||  | |||| |||||| |||||| ||||||||||||    
T  4542297 ttcctaaaattgtgtcacgaaatatccatcgtgacaagttttaaccaatgtcgaatgaac-tcatcctatgctccaaatcatgacacattttcaacaatc 4542199  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    ||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4542198 gtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaa 4542099  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||    
T  4542098 aatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 8276234 - 8276012
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||| ||||||||||||||| |    
T  8276234 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgatacgttttcaacaatcat 8276135  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||| || || |||||||||||||||||  ||||||||| |||| ||| ||||||    
T  8276134 gacacgattttgttttcttcaaaatcttctatttttcttgcttttcttgctgcttgagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaa 8276036  T
Q  335 atagtgaatgactgactgtcatca 358  Q
    |||  ||||||| |||||||||||    
T  8276035 atatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 45291249 - 45291474
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | || | |||||||||||||| ||||||  |||    
T  45291249 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcattctatgttccaaatcgtgacacgtttttcagtaat 45291348  T
Q  233 cgtgacacgattttgctttc--ttcaaaatcttc-tatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgaca 328  Q
      ||||||||   ||| |||  |||||  |||||   ||||||||| |||  ||| || ||||||||||||||||||||  ||||||||| |||| |||     
T  45291349 tatgacacga---tgccttcttttcaatttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagact 45291444  T
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  45291445 ctaaaaatagtgaatgactgactgtcatca 45291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 249 - 359
Target Start/End: Complemental strand, 16164998 - 16164888
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||  |||||||||    
T  16164998 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaattacactaaaaataacgaatgactg 16164899  T
Q  349 actgtcatcaa 359  Q
    |||||||||||    
T  16164898 actgtcatcaa 16164888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 48644725 - 48644616
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||  |||||||||    
T  48644725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacattatgaaaatgacactaaaaataaagaatgactg 48644626  T
Q  349 actgtcatca 358  Q
    ||||||||||    
T  48644625 actgtcatca 48644616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 45287913 - 45288138
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  | || | |||||||||||||| ||||||  |||    
T  45287913 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcttatgttccaaatcgtgacacgtttttcagtaat 45288012  T
Q  233 cgtgacacgattttgctttc--ttcaaaatcttc-tatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgaca 328  Q
     |||||||||   ||| |||  ||||   |||||   ||||||||| |||  ||| || ||||||||||||||||||||  ||||||||| |||| |||     
T  45288013 tgtgacacga---tgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagact 45288108  T
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  45288109 ctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 6602730 - 6602621
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||||  ||| || ||||| |||||||||||||||  |||||||||    
T  6602730 tttcttcaaaatcttgtatttttcatactttccttgttgtttaagcttgcttgtgaacttaaaacattatgaacatgacactaaaaataacgaatgactg 6602631  T
Q  349 actgtcatca 358  Q
    ||||||||||    
T  6602630 actgtcatca 6602621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 48645837 - 48645921
Alignment:
Q  274 tgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||    
T  48645837 tgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactgtcatca 48645921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 248 - 360
Target Start/End: Original strand, 20081530 - 20081642
Alignment:
Q  248 ctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgac 346  Q
    ||||||||||  ||||  ||||||||||||||  ||| || |||||||||||||||||||| ||| |||||| ||||  || ||||||||||||||||||    
T  20081530 ctttcttcaatttctttgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaac-actctaaaaatagtgaatgac 20081628  T
Q  347 tgactgtcatcaat 360  Q
    ||||||||||||||    
T  20081629 tgactgtcatcaat 20081642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 358
Target Start/End: Complemental strand, 17730071 - 17729973
Alignment:
Q  260 tcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||| ||||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| |||||||||||||| |||||||||||||||    
T  17730071 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaggactctaaaaatagtgaaagactgactgtcatca 17729973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 358
Target Start/End: Original strand, 9865493 - 9865642
Alignment:
Q  209 aaatcgtgacacgtttt-caacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaact 307  Q
    |||||||| |||||||| ||| ||||||||||||||  | |||| ||||   |||||  |||||||||||||  ||| || |||| ||||||||||||||    
T  9865493 aaatcgtgtcacgtttttcaataatcgtgacacgatcct-cttttttcattttcttcagtttttcttgcttttcttgctgcttaatcttgcttgtgaact 9865591  T
Q  308 cgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    | ||| |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  9865592 caaaaatatcataaaaa-gactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 22908981 - 22908883
Alignment:
Q  20 agttccctttcttgctccaaacgttgttccttttcct-tacgggtcagcccaattattttctcatcttttctttttatattcacactacctaagacaagc 118  Q
    ||||||||||||||||||||| |  |||||||||||  |||||| ||| |||||||||||||||||||   |||||||||||||||  ||||||||| ||    
T  22908981 agttccctttcttgctccaaatgccgttccttttccaatacgggccagtccaattattttctcatctt---tttttatattcacacctcctaagacatgc 22908885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 208 - 308
Target Start/End: Original strand, 9273885 - 9273984
Alignment:
Q  208 caaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaact 307  Q
    ||||||||||||||||||||  |||||||||| || ||  |||||||||   ||||| | ||||||| ||||  ||| || |||||||||||||||||||    
T  9273885 caaatcgtgacacgttttcagtaatcgtgacatga-ttccctttcttcagtttcttcaacttttctttcttttcttggtgcttaagcttgcttgtgaact 9273983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 13450736 - 13450765
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  13450736 ctaaaaatagtgaatgactgactgtcatca 13450765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 358
Target Start/End: Complemental strand, 10663350 - 10663011
Alignment:
Q  19 tagttccctttcttgctccaaacgttgttccttttccttacgggtcagcccaattattttctcatcttttctttttatattcacactacctaagacaagc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10663350 tagttccctttcttgctccaaacgttgttccttttccttacgggtcagcccaattattttctcatcttttctttttatattcacaccacctaagacaagc 10663251  T
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  10663250 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgctccaaatcatgac 10663151  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcat 318  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| | |||||||    
T  10663150 atgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgtgaactcaacatatcat 10663051  T
Q  319 gaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  10663050 gaaaaagactctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 134 - 354
Target Start/End: Original strand, 25595460 - 25595681
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  25595460 ttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacgttttcaacaatc 25595559  T
Q  234 gtgacacgattttgctttcttc-aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25595560 gtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 25595659  T
Q  333 aaatagtgaatgactgactgtc 354  Q
    ||| | ||||||||||||||||    
T  25595660 aaacaatgaatgactgactgtc 25595681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 33878014 - 33878238
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||| |||| |  |||| ||||||||||||||||||||    
T  33878014 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaataaacctcattctgtgttctaaattgtgacacgttttcaacaatc 33878113  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||    
T  33878114 gtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaactttcttgtgaactcaaaatatcatgaaaatgacactaaa 33878213  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||    
T  33878214 aatagtgaatgactgactgtcatca 33878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 18722086 - 18722312
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| || |||| ||||||||||  |||||| ||||||||||||||||||||||||||    
T  18722086 ttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccgatatcgaatgaacctcatc-tgtgctccaaatcgtgacacgttttcaacaatc 18722184  T
Q  234 gtgacacgattttgctttcttcaaaa-tcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18722185 gtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 18722284  T
Q  333 aaatagtgaatgactgactgtcatcaat 360  Q
    ||| ||||||||||||||||||||||||    
T  18722285 aaacagtgaatgactgactgtcatcaat 18722312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 134 - 354
Target Start/End: Original strand, 25592275 - 25592496
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||| ||||| ||||||||||||    
T  25592275 ttcctaaaatcgtgtcacgaaatagtcatcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgggacacattttcaacaatc 25592374  T
Q  234 gtgacacgattttgctttcttc-aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25592375 gtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 25592474  T
Q  333 aaatagtgaatgactgactgtc 354  Q
    ||| ||||||||||||||||||    
T  25592475 aaacagtgaatgactgactgtc 25592496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 43682575 - 43682798
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||  |||| | ||||| ||||||||||||||| ||||||    
T  43682575 cctaaaatcgtgtcacgaaatagccgtcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaattgtgacacgttttcaataatcgt 43682674  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatg-aaaatgacactaaaa 334  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| |||||||||| ||||||| |||||||    
T  43682675 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttatgaactcaaaatatcatgaaaaatgatactaaaa 43682774  T
Q  335 atagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||| |||||    
T  43682775 atagtgaatgactgactgccatca 43682798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 45156694 - 45156918
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||||||||||  |||||| ||||||||||||| ||||||||||||    
T  45156694 ttcctaaaatcgtgtcacgaaatagccattgtgacacgttttaatcaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacattttcaacaatc 45156793  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||| || | ||||||||||||||||||  ||||||||| |||| ||| ||||    
T  45156794 gtgacacgattgtgctttcttcaaaatcttctatttttcttgcttttcttgctgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaa 45156892  T
Q  333 aaatagtgaatgactgactgtcatca 358  Q
    |||||  ||||||   ||||||||||    
T  45156893 aaatatagaatgataaactgtcatca 45156918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 5540757 - 5540995
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  5540757 actttcaaattagg-ttcctaaaatcatgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgac 5540855  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatca 317  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||   ||| || ||| ||||||||||||||||  ||||||||    
T  5540856 acgttttcaacaatcgtgacatgattttgcttccttcaaaatcttctatttttcttacttgtcttgctgcttatgcttgcttgtgaactcaaaaatatca 5540955  T
Q  318 tgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    | |||| ||| ||||||||   |||||||  ||||||||||    
T  5540956 t-aaaaagactctaaaaatgtggaatgacaaactgtcatca 5540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 136 - 308
Target Start/End: Complemental strand, 25228234 - 25228064
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||     
T  25228234 cctaaaatcgtgtcacgaaataaccatcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacgttttcagcaatcga 25228135  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc 308  Q
    |||||||||||  ||||||||||||||||||||||||||| |||  ||| |  || |||||||||||||||||    
T  25228134 gacacgatttt--tttcttcaaaatcttctatttttcttgtttttcttgcttcttgagcttgcttgtgaactc 25228064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 161 - 360
Target Start/End: Complemental strand, 14421061 - 14420862
Alignment:
Q  161 atcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaat 260  Q
    |||||| ||||||||| ||||||| || ||||||||||  |||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14421061 atcgtgtcacgttttagccaatgttgagtgaacctcatcctgtgttccaaatcgtgacacgttttcaacaatcgtgatacgattttgctttcttcaaaat 14420962  T
Q  261 cttctatttttcttgctttctttgttgtttaagcttgcttgtgaact-cgaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    ||| |||||||||||||||  |||||| |||||||||||||||||||   ||||||||| |||| ||| ||||||||   ||||||  ||||||||||||    
T  14420961 cttatatttttcttgcttttcttgttgcttaagcttgcttgtgaactaaaaaatatcat-aaaaagactctaaaaatgtggaatgagagactgtcatcaa 14420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 17895277 - 17895403
Alignment:
Q  118 cacttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtga 217  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  17895277 cacttacaaattagagttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtga 17895376  T
Q  218 cacg-ttttcaacaatcgtgacacgat 243  Q
    |||| ||||||  ||||||||||||||    
T  17895377 cacgtttttcagtaatcgtgacacgat 17895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 14589707 - 14589816
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||     
T  14589707 tttcttcaaaatcttgtatttttcatgctttccttgttgtgtaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataatgaatgacta 14589806  T
Q  349 actgtcatca 358  Q
    ||| ||||||    
T  14589807 actatcatca 14589816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 20520173 - 20520079
Alignment:
Q  137 ctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaa 231  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||  |||| | ||||||||||||||||||||||||    
T  20520173 ctaaaatcgtgtcacgaaatagccattgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacacgttttcaacaa 20520079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 22174782 - 22174891
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||  ||| ||||||||||||||||| |||||| |||||| ||    
T  22174782 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaaacatcatgaaaatgacact-aaaataatgaatggct 22174880  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  22174881 gactgtcatca 22174891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 277 - 361
Target Start/End: Complemental strand, 23612650 - 23612566
Alignment:
Q  277 tttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaatg 361  Q
    |||||||| ||||||| ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  23612650 tttctttgctgtttaaacttgcttgtgaactcaaaatctcatcaaaatgacactaaaaatagtgaatgactgactgtcatcaatg 23612566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 18826725 - 18826836
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  18826725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagtttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 18826823  T
Q  348 gactgtcatcaat 360  Q
    |||||||||||||    
T  18826824 gactgtcatcaat 18826836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 138 - 243
Target Start/End: Complemental strand, 30640729 - 30640624
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    |||||||| |||||||||||  |||||| ||||||||||||||||  |||  |||| ||||  |||| | ||||  ||||||||||||||||||||||||    
T  30640729 taaaatcgcgtcacgaaatacacatcgttacacgttttaaccaataccgaaagaacttcatcttgtgatccaaagtgtgacacgttttcaacaatcgtga 30640630  T
Q  238 cacgat 243  Q
    ||||||    
T  30640629 cacgat 30640624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 23612803 - 23612745
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaa 192  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||| ||||    
T  23612803 ttcctaaaatcgtgtcacgaaatagccattgtgacacgttttaaacaatgtcgaatgaa 23612745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 19793019 - 19792926
Alignment:
Q  267 tttttcttgctttctttgttgtttaagctt-gcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||| |||||  ||||||||||| ||| |||||||||||| ||| |||||| |||| ||| |||||||||||||||| | |||||||||||    
T  19793019 tttttctagcttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaatggccgactgtcatca 19792926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 38249248 - 38249321
Alignment:
Q  248 ctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    ||||||||||||||||  | ||||| || |||| ||| |||||||||||||||||||| || ||| ||||||||    
T  38249248 ctttcttcaaaatctttaacttttcatgttttccttgctgtttaagcttgcttgtgaattcaaaagatcatgaa 38249321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 267 - 359
Target Start/End: Complemental strand, 30640598 - 30640504
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaat-gacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    |||||||||| ||  ||| || |||||||||||||||||||| ||| |||||| ||||  ||  || |||||||||||||| |||||||||||||    
T  30640598 tttttcttgcatttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaaaagattcttaaaatagtgaatgattgactgtcatcaa 30640504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 4862247 - 4862316
Alignment:
Q  20 agttccctttcttgctccaaacgttgttccttttcct-tacgggtcagcccaattattttctcatctttt 88  Q
    |||||||||| |||||||||| |  ||||||| |||  || ||| |||||||||||||||||||||||||    
T  4862247 agttcccttttttgctccaaatgccgttccttatccaatatggggcagcccaattattttctcatctttt 4862316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 194; Significance: 1e-105; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 125 - 358
Target Start/End: Original strand, 33410729 - 33410962
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttt 224  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   ||||||||||||||| ||||||||    
T  33410729 aaattagggttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcaccttgtgcttcaaatcgtaacacgttt 33410828  T
Q  225 tcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaat 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33410829 tcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaat 33410928  T
Q  325 gacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||||||    
T  33410929 gacactaaaaatagtgaatgactgactgtcatca 33410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 18910826 - 18910604
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||    
T  18910826 cctaaaatcgtgtcatgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttttcaacaatcgt 18910727  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  18910726 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagtttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 18910627  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||    
T  18910626 tagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 5669848 - 5669628
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||| | ||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  5669848 taaaatcgtgtcacgaaatagccaccgtgacacgttttaaccaatgtcgaataaacctcattttgtgtttcaaattgtgacacgttttcaacaatcgtga 5669749  T
Q  238 cacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaata 337  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  5669748 cacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaata 5669649  T
Q  338 gtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||    
T  5669648 gtgaatgactgactgtcatca 5669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 3798572 - 3798796
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  | || | ||||||||||||| ||||||||||||    
T  3798572 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctttgttccaaatcgtgacacattttcaacaatc 3798671  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  3798672 gtgacaagattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaa 3798771  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||    
T  3798772 aatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 5721749 - 5721971
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  5721749 cctaaaatcgtgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaatcgt 5721848  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  5721849 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgtttgtgaacttgaaatatcatgaaaatgacactaaaaa 5721948  T
Q  336 tagtgaatgactgactgtcatca 358  Q
     ||||||||||||| ||||||||    
T  5721949 cagtgaatgactgattgtcatca 5721971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 125 - 359
Target Start/End: Original strand, 19865410 - 19865644
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttt 224  Q
    |||||||| |||||||||||||||||||||||| ||||| |  |||||||||||||||||||| ||||||||||  |||||| |||||||||| || |||    
T  19865410 aaattagggttcctaaaatcgtgtcacgaaatagccatcttagcacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgatacattt 19865509  T
Q  225 tcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaat 324  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  19865510 tcaataatcgtgacacgattttgttttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaat 19865609  T
Q  325 gacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||| |||||||||||||||||||||||    
T  19865610 gacactaaaaacagtgaatgactgactgtcatcaa 19865644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 134 - 359
Target Start/End: Complemental strand, 15431388 - 15431163
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||||| ||||||||||||||||||| ||||||    
T  15431388 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttttcgacaatc 15431289  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  15431288 gtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaa 15431189  T
Q  334 aatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||||    
T  15431188 aatagtgaatgactgactgtcatcaa 15431163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 134 - 359
Target Start/End: Complemental strand, 15438002 - 15437777
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||||| ||||||||||||||||||| ||||||    
T  15438002 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttttcgacaatc 15437903  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  15437902 gtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaa 15437803  T
Q  334 aatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||||    
T  15437802 aatagtgaatgactgactgtcatcaa 15437777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 118 - 357
Target Start/End: Original strand, 19861047 - 19861286
Alignment:
Q  118 cacttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtga 217  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||  |||||| ||||||||||    
T  19861047 cacttacaaattagggttcctaaaatcgtgtcacgaaatagccatcttgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtga 19861146  T
Q  218 cacgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatca 317  Q
     |||||||||||||||||||||| ||||||  |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  19861147 tacgttttcaacaatcgtgacacaattttgtgttcttcaaaatcttatatttttcttgctttctttgctgtttaagcttgcttgtgaactcaaaatatca 19861246  T
Q  318 tgaaaatgacactaaaaatagtgaatgactgactgtcatc 357  Q
    |||||||||||||||||| |||||||||||| ||| ||||    
T  19861247 tgaaaatgacactaaaaacagtgaatgactgtctgccatc 19861286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 9717173 - 9716951
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||| | ||||||||||||| |||||||||||||||  |||||||||  ||||||  |||| ||| ||||||||||||||||||    
T  9717173 cctaaaatcgtgtcacgaaagagccatcgtgacacgatttaaccaatgtcgaacgaacctcatcctgtgctctaaattgtgccacgttttcaacaatcgt 9717074  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  9717073 gacacgattttgctttcttcgaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 9716974  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    ||||||||||| |||||||||||    
T  9716973 tagtgaatgaccgactgtcatca 9716951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 12237578 - 12237354
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||  |||||||||||||||| ||||||||||  |||  || |||| ||||||| ||||| ||||||    
T  12237578 ttcctaaaatcgtgtcacgaaatagccatcgtgacatattttaaccaatgtcgaatgaacctcatcctgtattttaaattgtgacacattttcgacaatc 12237479  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  12237478 gtgacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaa 12237379  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    || ||||||||| ||||| ||||||    
T  12237378 aacagtgaatgaatgactatcatca 12237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 49269958 - 49269735
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| | || |||||||||||||||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||    
T  49269958 ttcctaaaatcgtgtcacgaaatagc-attgtgacacgttttaaccaatgtcgaatgaatctcattttgttcttcaaatcgtgacacgttttcaacaatc 49269860  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||  |||||  ||||||||| ||||  || ||||    
T  49269859 gtgatacgattttgctttcttcaaaatcttctatttttcttgctttctttgccgtttaagcttgtttgctaactcaaaaatatcat-aaaaaaactctaa 49269761  T
Q  333 aaatagtgaatgactgactgtcatca 358  Q
    ||||    ||||||||||||||||||    
T  49269760 aaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 119 - 308
Target Start/End: Original strand, 40617573 - 40617762
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||||| | |||||||||||||||||||||||| |||||||||| |||||||| ||||||||| ||||||||||  |||| |  ||||||||||    
T  40617573 actttcaaattaaggttcctaaaatcgtgtcacgaaatagccatcgtgactcgttttaatcaatgtcgaatgaacctcatcttgtgttctaaatcgtgac 40617672  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc 308  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||    
T  40617673 acgttttcaacaatcgtggcacgattttgccttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactc 40617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 5680693 - 5680469
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||||||||||||||| |||||| | |  |||||||||||||||||||||||| ||||||||||| | ||||  |||| ||||||||||||||||||||    
T  5680693 ttcctaaaatcgtgtcaagaaatagcaaaagtgacacgttttaaccaatgtcgaatgaacctcattctatgctctaaattgtgacacgttttcaacaatc 5680594  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||||| |||||||  ||||||||| |||| ||| ||||    
T  5680593 gtgacatgattttgcttttttcaaaatcttctatttttcttgcttttcttgttgtttaagcttgcttatgaactcaaaaatatcat-aaaaagactctaa 5680495  T
Q  333 aaatagtgaatgactgactgtcatca 358  Q
    ||||   ||||||| | |||||||||    
T  5680494 aaatgtggaatgacagtctgtcatca 5680469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 124 - 321
Target Start/End: Complemental strand, 53093954 - 53093758
Alignment:
Q  124 caaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgtt 223  Q
    ||||||||| || ||||||||||||||||||||| ||||||||||||||| || |||||||||| ||||||||||  |||||| ||| ||||||||||||    
T  53093954 caaattagggtttctaaaatcgtgtcacgaaatagccatcgtgacacgttcta-ccaatgtcgaatgaacctcatcctgtgctccaattcgtgacacgtt 53093856  T
Q  224 ttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||| ||| ||||||||||||||||||||||| ||| | ||||||    
T  53093855 ttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgctttccttgctgtttaagcttgcttgtgaactcaaaagaccatgaa 53093758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 136 - 360
Target Start/End: Original strand, 37104039 - 37104243
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||  |||||||||||||                    ||    
T  37104039 cctaaaatcgtgtcacgaaatagccatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatc--------------------gt 37104118  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||| |    
T  37104119 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactcaaaatatcatgaaaatgatactaaaca 37104218  T
Q  336 tagtgaatgactgactgtcatcaat 360  Q
     ||||||||||||| ||||||||||    
T  37104219 cagtgaatgactgagtgtcatcaat 37104243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 250 - 358
Target Start/End: Complemental strand, 56198137 - 56198029
Alignment:
Q  250 ttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactga 349  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||    
T  56198137 ttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactga 56198038  T
Q  350 ctgtcatca 358  Q
    |||||||||    
T  56198037 ctgtcatca 56198029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 249 - 359
Target Start/End: Complemental strand, 56194831 - 56194721
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||| ||    
T  56194831 tttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgattg 56194732  T
Q  349 actgtcatcaa 359  Q
    |||||||||||    
T  56194731 actgtcatcaa 56194721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 249 - 360
Target Start/End: Complemental strand, 47114885 - 47114774
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| || |||| || |||||||||||||||||||||||| ||| || |||||||||||||||||||||  |||||||||    
T  47114885 tttcttcaaaatcttgtatttttcatgttttccttattgtttaagcttgcttgtgaactcaaaacataatgaaaatgacactaaaaataaagaatgactg 47114786  T
Q  349 actgtcatcaat 360  Q
    ||||||||||||    
T  47114785 actgtcatcaat 47114774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 15405793 - 15405898
Alignment:
Q  253 ttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgactg 352  Q
    ||||||||||| |||||||| ||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||     
T  15405793 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactt 15405892  T
Q  353 tcatca 358  Q
    ||||||    
T  15405893 tcatca 15405898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 249 - 359
Target Start/End: Complemental strand, 33926230 - 33926120
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| | | |||||| |||||||||||||| ||   ||||||||    
T  33926230 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaagacatcatgcaaatgacactaaaagtaacaaatgactg 33926131  T
Q  349 actgtcatcaa 359  Q
    |||||||||||    
T  33926130 actgtcatcaa 33926120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 44809795 - 44809906
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  44809795 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 44809893  T
Q  348 gactgtcatcaat 360  Q
    |||||||||||||    
T  44809894 gactgtcatcaat 44809906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 29324088 - 29323979
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  29324088 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 29323990  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  29323989 gactgtcatca 29323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 240 - 358
Target Start/End: Complemental strand, 14571144 - 14571026
Alignment:
Q  240 cgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatag 338  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| ||||||||      
T  14571144 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgt 14571046  T
Q  339 tgaatgactgactgtcatca 358  Q
     ||||||| ||| |||||||    
T  14571045 ggaatgacagaccgtcatca 14571026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 27013463 - 27013396
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaa 192  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  27013463 aaattagggttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaa 27013396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 252 - 353
Target Start/End: Original strand, 34320738 - 34320839
Alignment:
Q  252 cttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgac 350  Q
    |||||||||||| |||||||| ||||||| || |||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  ||||||||||    
T  34320738 cttcaaaatcttgtatttttcatgctttccttattgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgactgac 34320836  T
Q  351 tgt 353  Q
    |||    
T  34320837 tgt 34320839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 3718427 - 3718336
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| ||||||||||||||||||||  ||||||||| ||||| || ||||||||||||||||| ||||||||||||    
T  3718427 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaat-actctaaaaatagtgaatgagtgactgtcatca 3718336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 27013321 - 27013229
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| |||||||||| ||||||||| ||| |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  27013321 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 267 - 361
Target Start/End: Complemental strand, 12782197 - 12782103
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaatg 361  Q
    |||||||||||||  ||| || |||||||||||||| ||||| ||| |||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  12782197 tttttcttgcttttcttgctgcttaagcttgcttgtaaactcaaaaatatcat-aaaatgactctaaaaatagcgaatgactgactgtcatcaatg 12782103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 15812973 - 15813041
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatca 317  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||| ||||    
T  15812973 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaacatca 15813041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 139 - 320
Target Start/End: Original strand, 48014721 - 48014894
Alignment:
Q  139 aaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgtttt-caacaatcgtga 237  Q
    ||||| ||||||||||||| ||||| ||||||||||| | ||||||||| || |  |  || || ||| |||||||||||||||||| || ||| ||||     
T  48014721 aaaattgtgtcacgaaatagccatcatgacacgttttcatcaatgtcgaatgtatgtttttctgagctccaaatcgtgacacgtttttcagcaaccgtgt 48014820  T
Q  238 cacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatga 320  Q
    ||||||||  |||||||||          |||||||||||||  ||||||| ||||||||||||||||||| ||||| |||||    
T  48014821 cacgatttcactttcttcag---------tttttcttgcttttcttgttgtataagcttgcttgtgaactccaaataacatga 48014894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 270 - 358
Target Start/End: Complemental strand, 44164090 - 44164001
Alignment:
Q  270 ttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||  ||| || |||| ||||||||||||||| ||| |||||| |||| |||  |||||||||||||||||||||||||||||    
T  44164090 ttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatca 44164001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 15430674 - 15430766
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| || ||||||  |||||||||||||||||||    
T  15430674 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 15437288 - 15437380
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| || ||||||  |||||||||||||||||||    
T  15437288 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 21419070 - 21418987
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgac 350  Q
    |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| |||||||||||||| |||||||||||    
T  21419070 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagacactaaaaatagcgaatgactgac 21418987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 27677874 - 27677966
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||| |||||||  ||| || |||| |||| |||||||||| ||| |||||| |||| ||| ||||||||||||||| ||||||||||||||    
T  27677874 ttttttttgcttttcttgctgcttaatcttgattgtgaactcaaaaatatcataaaaaagactctaaaaatagtgaataactgactgtcatca 27677966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 350
Target Start/End: Complemental strand, 40794283 - 40794200
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgac 350  Q
    |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| |||||||||| |||||||||||    
T  40794283 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatagcgaatgactgac 40794200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 19826793 - 19826701
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatat--catgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| |||| ||| ||||||||||| ||| ||  ||| |||| ||| |||||||||| |||||||||||||||||||    
T  19826793 tttttcttgcttttcttgttgcttaatcttacttgtgaactcaaaaaatttcataaaaa-gactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 37741471 - 37741525
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    ||||||||| |||  ||| ||||||||||||||||||||||| ||||||||||||    
T  37741471 tttttcttgtttttcttgctgtttaagcttgcttgtgaactccaaatatcatgaa 37741525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 52007362 - 52007431
Alignment:
Q  289 ttaagcttgcttgtgaactcga-aatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||| ||||||| | |||||||| |||| ||| |||||||||| |||||||||||||||||||    
T  52007362 ttaagcttgcttttgaactcaacaatatcataaaaa-gactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 359
Target Start/End: Original strand, 27691933 - 27692026
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    |||||||||||||  ||| || |||| |||||||||||| || ||| |||| | |||| ||| ||||||||||||||||||| | |||||||||    
T  27691933 tttttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatcgtaaaaaagactctaaaaatagtgaatgactaattgtcatcaa 27692026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 17669485 - 17669447
Alignment:
Q  320 aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  17669485 aaaatgactttaaaaatagtgaatgactgactgtcatca 17669447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 189; Significance: 1e-102; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 52198529 - 52198305
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||    
T  52198529 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttttcaacaatc 52198430  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  52198429 gtgacatgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaa 52198330  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
     ||||||||||||||||||||||||    
T  52198329 catagtgaatgactgactgtcatca 52198305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 18645519 - 18645741
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  18645519 cctaaaatcgtgtcacgaaatagctatcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaatcgt 18645618  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18645619 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgtttgtgaacttgaaatatcatgaaaatgacactaaaaa 18645718  T
Q  336 tagtgaatgactgactgtcatca 358  Q
     ||||||||||||| ||||||||    
T  18645719 cagtgaatgactgattgtcatca 18645741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 136 - 359
Target Start/End: Complemental strand, 538237 - 538014
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||    
T  538237 cctaaaatcgtgtcacgaaataaccatcgtaacacgttttaaccaatgtcgaatgaacttcattctgtgctccaaatcgtgacacgttttcaacaatcgt 538138  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| |||| |||||||||| |||||||||||||| ||| |||||||    
T  538137 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaacttgtttgtgaactcaaaatatcatgaaaaagactctaaaaa 538038  T
Q  336 tagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||    
T  538037 tagtgaatgactgactgtcatcaa 538014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 23299329 - 23299553
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||  |||||| ||||| ||||||||||||| ||||||    
T  23299329 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctccaaattgtgacacgttttcgacaatc 23299428  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  23299429 gtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaa 23299528  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||    
T  23299529 aatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 134 - 359
Target Start/End: Complemental strand, 6922114 - 6921889
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||| || |||||||||| ||||||| ||||||||||||||||||| ||||||    
T  6922114 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttcaccaatgttgaatgaacctcatcatgtgctccaaatcgtgacacgttttcgacaatc 6922015  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||| ||||||||||||||| |||||||||||||| | | |||||    
T  6922014 gtgacacgattttgctttcttcaaaatcttatatttctcttgttttctttgctgtttaaacttgcttgtgaactcaaaatatcatgaaaaaggctctaaa 6921915  T
Q  334 aatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||||    
T  6921914 aatagtgaatgactgactgtcatcaa 6921889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 10884240 - 10884018
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||  ||||| ||||||||||||| ||||||||| ||||||| ||  ||||||||||||||||||| |||||||||||||||    
T  10884240 cctaaaatcgtgtcacgaaatggccatcatgacacgttttaatcaatgtcgaatgaacctaatcctgtgcttcaaatcgtgacaggttttcaacaatcgt 10884141  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||| ||||||||||||||| ||| |||| ||| ||||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  10884140 gacacgattttgctttcttcgaaatcttctattttttttgttttcattgctgtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaaaa 10884041  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||    
T  10884040 tagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 10107405 - 10107614
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||| | | ||| ||||| |||||| |||| ||||||||||                 
T  10107405 cctaaaatcgtgtcacgaaataaccatcgtaacgcgttttaaccaatgtcaaattaacttcattctgtgctccaaaccgtgacacgt------------- 10107491  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10107492 gacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaa 10107591  T
Q  336 tagtgaatgactgactgtcatca 358  Q
     ||||||||||||||||||||||    
T  10107592 cagtgaatgactgactgtcatca 10107614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 16185434 - 16185656
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||  ||||||  ||| ||||||| |||||||||||||||    
T  16185434 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaaacgtgacatgttttcaacaatcgt 16185533  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||| || ||||||||| ||||||||||  ||||||||| |||| ||| ||||||    
T  16185534 gacacgattttgctttcttcaaaatcttatatttttcttgcttttcttgctgcttaagcttgtttgtgaactcaaaaatatcat-aaaaagactctaaaa 16185632  T
Q  335 atagtgaatgactgactgtcatca 358  Q
    ||   ||||||| |||||||||||    
T  16185633 atgtggaatgacagactgtcatca 16185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 35411901 - 35411676
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||| | ||||||||||||||||||| ||||||    
T  35411901 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacacgttttcgacaatc 35411802  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    |||||||||||||||||||||||||||||||||||||||||  |||  ||| || ||||| ||||||||||||||  ||||||||| |||| ||| ||||    
T  35411801 gtgacacgattttgctttcttcaaaatcttctatttttctttgttttcttgctgcttaagtttgcttgtgaactcaaaaatatcat-aaaaagactctaa 35411703  T
Q  333 aaatagtg-aatgactgactgtcatca 358  Q
    ||||  || |||||| |||||||||||    
T  35411702 aaatgttgaaatgacagactgtcatca 35411676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 118 - 243
Target Start/End: Original strand, 6445421 - 6445547
Alignment:
Q  118 cacttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtga 217  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  6445421 cacttacaaattagagttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtga 6445520  T
Q  218 cacg-ttttcaacaatcgtgacacgat 243  Q
    |||| ||||||  ||||||||||||||    
T  6445521 cacgtttttcagtaatcgtgacacgat 6445547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 254 - 358
Target Start/End: Original strand, 17532565 - 17532669
Alignment:
Q  254 tcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgactgt 353  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17532565 tcaaaatcttctttttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaaaacagtgaatgactgactgt 17532664  T
Q  354 catca 358  Q
     ||||    
T  17532665 aatca 17532669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 134 - 359
Target Start/End: Complemental strand, 53815196 - 53814970
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaat 232  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  | || |||||||||||||||| ||||||  |||    
T  53815196 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctatgtttcaaatcgtgacacgtttttcagtaat 53815097  T
Q  233 cgtgacacgattttgctttc--ttcaaaatcttc-tatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgaca 328  Q
     |||||||||   ||| |||  ||||   |||||   ||||||||| |||  ||| || ||||||||||||||||||||  ||||||||| |||| |||     
T  53815096 tgtgacacga---tgccttcttttcagtttcttcagctttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagact 53815001  T
Q  329 ctaaaaatagtgaatgactgactgtcatcaa 359  Q
    |||||||||||||||||||||||||||||||    
T  53815000 ctaaaaatagtgaatgactgactgtcatcaa 53814970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 118 - 243
Target Start/End: Complemental strand, 28265241 - 28265115
Alignment:
Q  118 cacttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtga 217  Q
    ||||| ||||||||  |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||    
T  28265241 cacttacaaattagagttcctaaaatcgtgtcacgaaatagccaccgtgacacgttttaaccaatgtcgaatgaacttcatcatgtgcttcaaatcgtga 28265142  T
Q  218 cac-gttttcaacaatcgtgacacgat 243  Q
    |||  ||||||  ||||||||||||||    
T  28265141 cacatttttcagtaatcgtgacacgat 28265115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 55032698 - 55032800
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||| ||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||    
T  55032698 actttcaaatcagggttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgac 55032797  T
Q  219 acg 221  Q
    |||    
T  55032798 acg 55032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 179 - 336
Target Start/End: Original strand, 22994413 - 22994570
Alignment:
Q  179 caatgtcgattgaacctcattatgtgcttcaaatcgtgacacgtttt-caacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgct 277  Q
    ||||||||| || ||||||||||||||| |||||||||||||||||| |||||| |||| ||| ||||  |||||  || |||||||  |||||||||||    
T  22994413 caatgtcgaatgcacctcattatgtgctccaaatcgtgacacgtttttcaacaaccgtgtcactatttcactttcaccacaatcttcagtttttcttgct 22994512  T
Q  278 ttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaat 336  Q
    ||| ||| |||||||||||||||||| |||| ||||||||| || || |||||||||||    
T  22994513 ttccttgctgtttaagcttgcttgtggactcaaaatatcat-aatattacactaaaaat 22994570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 133 - 350
Target Start/End: Original strand, 54736626 - 54736842
Alignment:
Q  133 attcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaat 232  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||||||  ||| ||||||||||  | |||||||||| |||||| ||||| ||||||    
T  54736626 attcttaaaatcgtgtcacgaaatagacatcgtgacacgttttaaccaataccgaatgaacctcatcctatgcttcaaattgtgacatgtttttaacaat 54736725  T
Q  233 cgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacacta 331  Q
    ||||| || | |   || | ||||   |||||  ||||| |||||||  |||||| |||||||||||||||||||| ||| |||||| |||| ||| |||    
T  54736726 cgtgatac-aatgccctcttttcagtttcttcagttttttttgcttttcttgttgcttaagcttgcttgtgaactcaaaagtatcat-aaaaagactcta 54736823  T
Q  332 aaaatagtgaatgactgac 350  Q
    |||||||||||||| ||||    
T  54736824 aaaatagtgaatgattgac 54736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 19302255 - 19302364
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||| |||| ||| |||||||||   ||||||     
T  19302255 tttcttcaaaatcttctatttttctcgctttccttgttgtttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatatgaaatgacg 19302353  T
Q  348 gactgtcatca 358  Q
    |||| ||||||    
T  19302354 gactatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 118 - 187
Target Start/End: Complemental strand, 9392128 - 9392059
Alignment:
Q  118 cacttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcga 187  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  9392128 cactttcaaattaggattcttaaaatcgtgtcacgaaatagccatcgtgacacgttttagccaatgtcga 9392059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 138 - 358
Target Start/End: Complemental strand, 54460596 - 54460367
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaatcgtg 236  Q
    |||||||||||||||||||| |||||||||||||||||||||||| | || ||||| ||||  | || | |||||||||||||| |||| |  |||||||    
T  54460596 taaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatcttgaatgaac-tcatcctatgttccaaatcgtgacacgctttttagtaatcgtg 54460498  T
Q  237 acacgat------tttgc--tttcttcaaaatcttct-atttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatga 326  Q
    |||||||      ||| |  ||||||||   | |||| | ||||||| ||||  |||||| ||||| |||||||||||||| ||| |||||| |||| ||    
T  54460497 acacgatgcccacttttcagtttcttcagttttttcttacttttctttcttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaa-ga 54460399  T
Q  327 cactaaaaatagtgaatgactgactgtcatca 358  Q
    | ||||||||||||||||||||||||||||||    
T  54460398 ctctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 17532493 - 17532557
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcat 198  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||| |||| ||||||||||    
T  17532493 ttcctaaaatcgtgtcacgaaatagtcatcgtgacacgttttaaccaatatcgaatgaacctcat 17532557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 208 - 358
Target Start/End: Original strand, 29344622 - 29344773
Alignment:
Q  208 caaatcgtgacacgtttt-caacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaac 306  Q
    ||||||||| |||||||| ||| ||||||||||||||    |||| ||||   ||||| ||||||||||||||  ||| || |||| |||||||||||||    
T  29344622 caaatcgtgtcacgtttttcaataatcgtgacacgatccc-cttttttcagtttcttcaatttttcttgcttttcttgctgcttaatcttgcttgtgaac 29344720  T
Q  307 tcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    || ||| |||||| | || ||| ||||||||||||||||||||||||||||||    
T  29344721 tcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 230 - 274
Target Start/End: Original strand, 55032789 - 55032833
Alignment:
Q  230 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 274  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  55032789 aatcgtgacacgattttgctttcttcaaaatcttctatttttctt 55032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 267 - 357
Target Start/End: Complemental strand, 9380102 - 9380012
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatc 357  Q
    |||||||||||||  || ||| |||||||||||||||||||| ||| |||||| |||| ||| |||||||||| ||||||||||||||||||    
T  9380102 tttttcttgcttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 23193789 - 23193691
Alignment:
Q  20 agttccctttcttgctccaaacgttgttccttttcct-tacgggtcagcccaattattttctcatcttttctttttatattcacactacctaagacaagc 118  Q
    ||||||||||||||||||||| |  |||||||||||  |||||| |||||||||||||||||||   ||| |||||||||||||||  ||||||||| ||    
T  23193789 agttccctttcttgctccaaatgccgttccttttccaatacgggccagcccaattattttctca---tttttttttatattcacacctcctaagacatgc 23193693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 248 - 358
Target Start/End: Complemental strand, 3839903 - 3839790
Alignment:
Q  248 ctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcat--gaaaatgacactaaaaatagtgaatg 344  Q
    ||||||||||  |||||  |||||||||||||  ||| || ||||||||||||||||||||  |||||||||   ||||  || ||||||||||||||||    
T  3839903 ctttcttcaatttcttcggtttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatg 3839804  T
Q  345 actgactgtcatca 358  Q
    ||||||||||||||    
T  3839803 actgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 34984668 - 34984758
Alignment:
Q  268 ttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||  |||||| |||| |||||||||||||||  ||||||||| |||| ||| |||||||||  |||||||||||||||||||    
T  34984668 ttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 8462338 - 8462392
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaa 192  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  8462338 taaaatcgtgtcacgaaatagccatcgtgatacgttttaatcaatgtcgaatgaa 8462392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 16243257 - 16243166
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  ||| || |||| |||||||||||||||  ||||||||| |||| ||| |||||||||| |||||||||| ||||||||    
T  16243257 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatagcgaatgactgattgtcatca 16243166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 256 - 308
Target Start/End: Original strand, 19305445 - 19305497
Alignment:
Q  256 aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc 308  Q
    |||| ||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  19305445 aaaaacttctatttttctcgctttccttgctgtttaagcttgcttgtgaactc 19305497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 20729407 - 20729479
Alignment:
Q  289 ttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaat 360  Q
    |||||||||||||||||||  ||| |||||| ||||  || |||||||||| |||||||||||||||||||||    
T  20729407 ttaagcttgcttgtgaactaaaaaatatcataaaaaaaactctaaaaatagcgaatgactgactgtcatcaat 20729479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 191 - 246
Target Start/End: Complemental strand, 9380198 - 9380143
Alignment:
Q  191 aacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtgacacgatttt 246  Q
    ||||||||  ||||||  ||||||||||||||||||||||| ||||||||||||||    
T  9380198 aacctcatcctgtgctctaaatcgtgacacgttttcaacaaccgtgacacgatttt 9380143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 11636199 - 11636146
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    |||||||||||||  |||| |||||||||||||||||||||| ||||||||||||    
T  11636199 tttttcttgcttttcttgt-gtttaagcttgcttgtgaactctaaatatcatgaa 11636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 41976412 - 41976321
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||| |||||||  ||| ||||||| ||||||||||||||| ||| ||| || ||||  || |||||||||| |||||||||||||||||||    
T  41976412 tttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatattataaaaac-actctaaaaatagcgaatgactgactgtcatca 41976321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 307
Target Start/End: Complemental strand, 17529585 - 17529546
Alignment:
Q  268 ttttcttgctttctttgttgtttaagcttgcttgtgaact 307  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  17529585 ttttcttgttttctttgctgtttaagcttgcttgtgaact 17529546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 10962466 - 10962428
Alignment:
Q  320 aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  10962466 aaaatgactctaaaaatagtgaatgactgactgccatca 10962428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 10965975 - 10965937
Alignment:
Q  320 aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  10965975 aaaatgactctaaaaatagtgaatgactgactgccatca 10965937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 359
Target Start/End: Complemental strand, 10880863 - 10880775
Alignment:
Q  271 tcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    |||||||||  ||| || |||| ||||||||||||||| ||| |||||| |||| ||| ||||||||||  ||| |||||||||||||||    
T  10880863 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagcaaataactgactgtcatcaa 10880775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 358
Target Start/End: Complemental strand, 31857084 - 31857055
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  31857084 ctaaaaatagtgaatgactgactgtcatca 31857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 42355307 - 42355336
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  42355307 ctaaaaatagtgaatgactgactgtcatca 42355336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 182; Significance: 5e-98; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 134 - 367
Target Start/End: Complemental strand, 61821 - 61588
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||| ||||||||||||||||||||| ||||||    
T  61821 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcttgtgtttcaaatcgtgacacgttttcgacaatc 61722  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  61721 gtgacacgattttgctttctttaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacactaaa 61622  T
Q  334 aatagtgaatgactgactgtcatcaatgatcaac 367  Q
    || |||||||||||||||||||||| | ||||||    
T  61621 aacagtgaatgactgactgtcatcatttatcaac 61588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 179; Significance: 3e-96; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 49499344 - 49499570
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| || |||| ||||||||||||||||||||||||||    
T  49499344 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcatatgctccaaatcgtgacacgttttcaacaatc 49499443  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  49499444 gtgacatgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaataacactaaa 49499543  T
Q  334 aatagtgaatgactgactgtcatcaat 360  Q
    || || |||||||||||||||||||||    
T  49499544 aacagcgaatgactgactgtcatcaat 49499570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 2793521 - 2793299
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  2793521 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaatcgt 2793422  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||  ||||||| ||||||||||||||| ||||||||| |||| ||| |||||||    
T  2793421 gacacgattttgctttcttcgaaatcttctatttttcttgttttctttactgtttaaacttgcttgtgaactcaaaatatcattaaaaagactctaaaaa 2793322  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    ||||||| |||||||||||||||    
T  2793321 tagtgaacgactgactgtcatca 2793299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 1951121 - 1951347
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||||||  | |||| ||||||||||||||||||||||||||    
T  1951121 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccactgtcgaatgaacctcatcctatgctccaaatcgtgacacgttttcaacaatc 1951220  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    |||||||||||||||||||||  ||||||||||||||||||| |||||||| ||||||| ||||||||||||||| | ||||||||||||||| ||| ||    
T  1951221 gtgacacgattttgctttctttgaaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactcaagatatcatgaaaatgatacttaa 1951320  T
Q  334 aatagtgaatgactgactgtcatcaat 360  Q
    |||||||||||||||||||||||||||    
T  1951321 aatagtgaatgactgactgtcatcaat 1951347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 136 - 358
Target Start/End: Original strand, 29644086 - 29644308
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||| |||||||||||| ||||||| |||||||||| |||||||||| |||| |||||  |||||| |||||||||| |||||||||||||||||    
T  29644086 cctaaaatcatgtcacgaaatagccatcgtaacacgttttagccaatgtcgaatgaatctcatcctgtgctccaaatcgtgatacgttttcaacaatcgt 29644185  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| |||| || ||||| ||||||||||||||  ||||||||| |||| ||| ||| ||    
T  29644186 gacacgattttactttcttcaaagtcttctatttttcttgctttttttgctgcttaagtttgcttgtgaactcaaaaatatcat-aaaaagactctataa 29644284  T
Q  335 atagtgaatgactgactgtcatca 358  Q
    ||   ||||||| |||||||||||    
T  29644285 atgtggaatgacagactgtcatca 29644308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 124 - 359
Target Start/End: Original strand, 34733030 - 34733263
Alignment:
Q  124 caaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgtt 223  Q
    ||||||| | ||||||||||| |||||||||||| |||||||||||| ||||| |||||||||| ||||||||||  |||||| |||||| ||||| |||    
T  34733030 caaattatgtttcctaaaatcatgtcacgaaatagccatcgtgacacatttta-ccaatgtcgaatgaacctcatcctgtgctccaaatcctgacatgtt 34733128  T
Q  224 ttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaa 323  Q
    ||||||||||||| ||||||||| ||||||||||||||||| | ||||| || |||| ||  ||||||| ||||||||||||||| ||| ||||| |||     
T  34733129 ttcaacaatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgatttccttactgtttaatcttgcttgtgaactcaaaagatcat-aaat 34733227  T
Q  324 tgacactaaaaatagtg-aatgactgactgtcatcaa 359  Q
    | ||| |||||||| || ||||||| |||||||||||    
T  34733228 ttacaataaaaataatgtaatgact-actgtcatcaa 34733263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 31204123 - 31204014
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||  |||||||||    
T  31204123 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacataatgaaaatgacactaaaaataaagaatgactg 31204024  T
Q  349 actgtcatca 358  Q
    ||| ||||||    
T  31204023 actatcatca 31204014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 136 - 359
Target Start/End: Complemental strand, 42021945 - 42021720
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacac-gttttcaacaatcg 234  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||    |||| |||||||||||||  ||||||  |||||    
T  42021945 cctaaaatcgtgtcacgaaatagccatcgtaacacgttttaaccaatgtcgaatgaacctcatccgatgctccaaatcgtgacacatttttcagtaatcg 42021846  T
Q  235 tgacacgattttgctttcttcaaaatcttc--tatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacacta 331  Q
    |||||||| |   || | ||||   |||||  | |||||||||||||  ||| || |||| ||||||||||||||| | ||||| || |||| ||| |||    
T  42021845 tgacacga-tgccctcttttcagtttcttcaatttttttcttgcttttattgctgcttaaacttgcttgtgaactcagtaatattat-aaaaagactcta 42021748  T
Q  332 aaaatagtgaatgactgactgtcatcaa 359  Q
    ||||||| |||||| |||||||||||||    
T  42021747 aaaatagcgaatgattgactgtcatcaa 42021720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 45961598 - 45961707
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| || | ||| ||||||||||  |||||||    
T  45961598 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aacaagactctaaaaatagcaaatgact 45961696  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  45961697 gactgtcatca 45961707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 249 - 357
Target Start/End: Original strand, 27537104 - 27537212
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| |||  |||||||||  |||||||    
T  27537104 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactataaaaatagcaaatgact 27537202  T
Q  348 gactgtcatc 357  Q
    ||||||||||    
T  27537203 gactgtcatc 27537212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 6071791 - 6071895
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| || |||  ||||||||||||||||||||||||||| ||| | ||||||||||||     ||||| ||||||||||    
T  6071791 tttcttcaaaatcttgtatttttcatgtttttcttgttgtttaagcttgcttgtgaactcaaaacaacatgaaaatgac-----aaataatgaatgactg 6071885  T
Q  349 actgtcatca 358  Q
    ||||||||||    
T  6071886 actgtcatca 6071895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 260 - 358
Target Start/End: Original strand, 41059135 - 41059234
Alignment:
Q  260 tcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||| ||||||||||||||  ||| || ||||||||||||| |||||| ||| |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  41059135 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 2404809 - 2404722
Alignment:
Q  271 tcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||  ||| || |||| ||||||||||||||| ||| ||| || |||| ||| |||||||||| |||||||||||||||||||    
T  2404809 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatattataaaaa-gactctaaaaatagcgaatgactgactgtcatca 2404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 329 - 359
Target Start/End: Original strand, 22460414 - 22460444
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatcaa 359  Q
    |||||||||||||||||||||||||||||||    
T  22460414 ctaaaaatagtgaatgactgactgtcatcaa 22460444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 47708779 - 47708817
Alignment:
Q  320 aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  47708779 aaaaagactctaaaaatagtgaatgactgactgtcatca 47708817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 282 - 319
Target Start/End: Complemental strand, 7634963 - 7634926
Alignment:
Q  282 ttgttgtttaagcttgcttgtgaactcgaaatatcatg 319  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  7634963 ttgttgtttaagcttacttgtgaactcaaaatatcatg 7634926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 22454290 - 22454319
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  22454290 ctaaaaatagtgaatgactgactgtcatca 22454319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 174; Significance: 3e-93; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 134 - 359
Target Start/End: Original strand, 36809211 - 36809436
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| |||||  |||||| ||||||||||||||||||||||||||    
T  36809211 ttcctaaaatcgtgtcacaaaatagccatcgtgacacgttttaaccaatgtcgaatgaatctcatcctgtgctccaaatcgtgacacgttttcaacaatc 36809310  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    ||||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36809311 gtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaatgacactaaa 36809410  T
Q  334 aatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||||    
T  36809411 aatagtgaatgactgactgtcatcaa 36809436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 38006062 - 38006286
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||| ||||||||||||||||||| ||||||    
T  38006062 ttcctgaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacgttttcgacaatc 38006161  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  38006162 gtcacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgtttgtgaactcaaaatatcatgaaaatgacactaaa 38006261  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    || ||||||||||||||||| ||||    
T  38006262 aacagtgaatgactgactgtaatca 38006286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 8e-88
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 25873427 - 25873203
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||  |||||| |||||| |||||||||||| ||||||    
T  25873427 ttcctaaaatcgtgtcacgaaatagccatcgtgacacggtttaaccaatgtcgaatgaacctcatcctgtgctccaaatcatgacacgttttcgacaatc 25873328  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||| ||| |||||    
T  25873327 gtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaacttgcttgtgaactcaaaatatcatgaaaaagactctaaa 25873228  T
Q  334 aatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||||    
T  25873227 aatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 26358894 - 26358672
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||| ||| ||||||||||  |||||| ||||||||| ||||||||||||||||||    
T  26358894 cctaaaatcgtgtcacgaaatagccatcgtgacacgatttaaccaatgccgaatgaacctcatcctgtgctccaaatcgtgccacgttttcaacaatcgt 26358795  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  26358794 gacacgattttgctttcttcgaaatcttctatttttcttgtcttctttgctgtttaaacttccttgtgaactcaaaatatcatgaaaatgacactaaaaa 26358695  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||||||    
T  26358694 tagtgaatgactgactgtcatca 26358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 134 - 359
Target Start/End: Original strand, 25821693 - 25821923
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||| | ||||||||||||| ||||||||||||    
T  25821693 ttcctaaaatcgtgtcacgaaatagccatcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacaccttttcaacaatc 25821792  T
Q  234 gtgacacgattttgctttcttc-aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaa----atatcatgaaaatgaca 328  Q
     ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    |||||||||||||||||    
T  25821793 ttgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaatatatatcatgaaaatgaca 25821892  T
Q  329 ctaaaaatagtgaatgactgactgtcatcaa 359  Q
    ||||||| |||||||||||||||||||||||    
T  25821893 ctaaaaacagtgaatgactgactgtcatcaa 25821923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 134 - 359
Target Start/End: Complemental strand, 25870059 - 25869834
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    ||||||||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||| ||||  |||||| ||||||||||||||||||| ||||||    
T  25870059 ttcctaaaatcgtatcacgaaatagccatcgtgacacgttttaatcaatgtcgaatgaacttcatcctgtgctccaaatcgtgacacgttttcgacaatc 25869960  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaa 333  Q
    ||||||||||||| |||||||||||||||||||||| ||||| |||||||||||||||| ||| ||||||||||| |||||||||||||| ||| |||||    
T  25869959 gtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaactttcttgtgaactcaaaatatcatgaaaaagactctaaa 25869860  T
Q  334 aatagtgaatgactgactgtcatcaa 359  Q
    ||||||||||||||||||||||||||    
T  25869859 aatagtgaatgactgactgtcatcaa 25869834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 138 - 359
Target Start/End: Original strand, 30275472 - 30275692
Alignment:
Q  138 taaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtga 237  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||  |  ||| ||||||||||||||||||||||||||||||    
T  30275472 taaaatcgtgtcacgaaataaccatcgtgacacgttttaaccaatgtcgaatgaac-tcatcctacgctccaaatcgtgacacgttttcaacaatcgtga 30275570  T
Q  238 cacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaata 337  Q
    ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||||||    
T  30275571 cacgaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgtttgtgaattcaaaatatcatgaaaatgacactaaaaata 30275670  T
Q  338 gtgaatgactgactgtcatcaa 359  Q
     ||||||||||||| |||||||    
T  30275671 ttgaatgactgactatcatcaa 30275692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 25139801 - 25140040
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||||||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||| | ||||||||||  |||||| |||||||||||    
T  25139801 acttccaaattagggttcctaaaatcgtgtcacgaaatagccattgtgacacgttttaactaatgtctaatgaacctcatcttgtgctccaaatcgtgac 25139900  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatca 317  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||||  ||||||||    
T  25139901 acgttgtcaacaatcgtgacacgattttgctttcttcgaaatcttctatttttcttgctttctttgccgtttaagcttacttgtgaactcaaaaatatca 25140000  T
Q  318 tgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    | ||||  || |||||| |   |||||||||||||||||||    
T  25140001 t-aaaaaaactctaaaattgtggaatgactgactgtcatca 25140040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 230 - 358
Target Start/End: Complemental strand, 15466298 - 15466170
Alignment:
Q  230 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacac 329  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15466298 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactcaaaatatcatgaaaatgacac 15466199  T
Q  330 taaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||| ||||||||    
T  15466198 taaaaatagtgaatgactgattgtcatca 15466170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 137 - 358
Target Start/End: Complemental strand, 16788609 - 16788389
Alignment:
Q  137 ctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgtg 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||| | |||  |||  || |||  ||||||||||||||||||||||||||||    
T  16788609 ctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatatcgaataaactccatcctgcgctctaaatcgtgacacgttttcaacaatcgtg 16788510  T
Q  237 acacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaa 335  Q
    |||||||| ||||||| |||||||||| |||||||||||||||  |||||| |||||||||||||||||||| ||| ||||||  ||| ||  |||||||    
T  16788509 acacgattgtgctttcatcaaaatcttatatttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaattatcat--aaaagattctaaaaa 16788412  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    |||  ||||||||||||||||||    
T  16788411 tagcaaatgactgactgtcatca 16788389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 136 - 363
Target Start/End: Complemental strand, 29439797 - 29439592
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||||                    |    
T  29439797 cctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatatcgaatgaacttcatcctgtgcttcaaatcg--------------------t 29439718  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||| |||||||||||||||  || |||||||||||||||||||||     
T  29439717 gacacgattttgctttcttcgaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactc--aacatcatgaaaatgacactaaaat 29439620  T
Q  336 tagtgaatgactgactgtcatcaatgat 363  Q
    ||  ||||||| ||||||||||| ||||    
T  29439619 taacgaatgacggactgtcatcattgat 29439592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 249 - 355
Target Start/End: Original strand, 36985626 - 36985732
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  36985626 tttcttcaaaatcttctattttttctgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactg 36985725  T
Q  349 actgtca 355  Q
    |||||||    
T  36985726 actgtca 36985732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 45456409 - 45456300
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||| |||    
T  45456409 tttcttcaaaatcttgtatttttcatgctttctttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatggctg 45456310  T
Q  349 actgtcatca 358  Q
    | ||||||||    
T  45456309 attgtcatca 45456300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 45453160 - 45453051
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||| |||||||||  |||||||||    
T  45453160 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgaccctaaaaataaagaatgactg 45453061  T
Q  349 actgtcatca 358  Q
    | ||||||||    
T  45453060 attgtcatca 45453051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 134 - 225
Target Start/End: Complemental strand, 10600187 - 10600096
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgtttt 225  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||  | || | ||||||||||||||||||    
T  10600187 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgttccaaatcgtgacacgtttt 10600096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 38014745 - 38014636
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  38014745 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 38014647  T
Q  348 gactgtcatca 358  Q
    |||||||||||    
T  38014646 gactgtcatca 38014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 31430529 - 31430638
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgact 347  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||  |||||||    
T  31430529 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcat-aaaaagactctaaaaatagcaaatgact 31430627  T
Q  348 gactgtcatca 358  Q
     ||||||||||    
T  31430628 aactgtcatca 31430638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 249 - 313
Target Start/End: Original strand, 31428340 - 31428404
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaat 313  Q
    ||||||||||||||| |||||||| ||||||| ||||||||||| ||||||||||||||| ||||    
T  31428340 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaat 31428404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 10600042 - 10599951
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||| |||  ||| || |||||||||||||||||||| ||| |||||| |||| ||  ||||||||||||||||||||||||||||||    
T  10600042 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gattctaaaaatagtgaatgactgactgtcatca 10599951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 289 - 363
Target Start/End: Complemental strand, 5665899 - 5665825
Alignment:
Q  289 ttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaatgat 363  Q
    |||||||||||||||||||| ||| |||||| |||| ||| |||||||||| |||||| |||||||||||||||||    
T  5665899 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagcgaatgattgactgtcatcaatgat 5665825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 30925984 - 30925934
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgtttt 175  Q
    |||||||| ||||| ||||||||||||||| || |||||||||||||||||    
T  30925984 aaattagggttcctgaaatcgtgtcacgaattagccatcgtgacacgtttt 30925934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 3874573 - 3874482
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  ||| || |||| |||| |||||||||| ||| |||| | |||| ||| ||||||||| ||||||||||||||||||||    
T  3874573 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcctaaaaa-gactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 267 - 356
Target Start/End: Complemental strand, 13136853 - 13136764
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcat 356  Q
    |||||||||||||  ||| || |||| |||| |||||||||| ||| |||||| |||||||| |||||||||   ||||||||||||||||    
T  13136853 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcat-aaaatgactctaaaaataacaaatgactgactgtcat 13136764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 2e-88; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 134 - 354
Target Start/End: Original strand, 23379589 - 23379810
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  23379589 ttcctagaatcgtgtcacgaaatagctatcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacgttttcaacaatc 23379688  T
Q  234 gtgacacgattttgctttcttc-aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  23379689 gtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 23379788  T
Q  333 aaatagtgaatgactgactgtc 354  Q
    ||| ||||||||||||||||||    
T  23379789 aaacagtgaatgactgactgtc 23379810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 134 - 359
Target Start/End: Original strand, 23388928 - 23389154
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||| ||||||||||||||||| | ||||||||||||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  23388928 ttcctagaatcgtgtcacgaaatagctatcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacgttttcaacaatc 23389027  T
Q  234 gtgacacgattttgctttcttc-aaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||    
T  23389028 gtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgctgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 23389127  T
Q  333 aaatagtgaatgactgactgtcatcaa 359  Q
    ||| |||||||||||||||||| ||||    
T  23389128 aaacagtgaatgactgactgtcgtcaa 23389154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 119 - 358
Target Start/End: Original strand, 5738950 - 5739190
Alignment:
Q  119 acttgcaaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgac 218  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||  | |||| |||||||||||    
T  5738950 actttcaaattagggttcctaaaatcgtgtcacgaaatagccatcgtgacgcgttttaaccaatgtcgaatgaacctcatcctttgctccaaatcgtgac 5739049  T
Q  219 acgttttcaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcat 318  Q
    | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||| | |||||||    
T  5739050 atgtttttaacaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgtgaactcaacatatcat 5739149  T
Q  319 g-aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    | ||||  || ||||||||||||||||||||||||||||||    
T  5739150 gaaaaaaaactctaaaaatagtgaatgactgactgtcatca 5739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 134 - 358
Target Start/End: Complemental strand, 9953260 - 9953036
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatc 233  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  9953260 ttcctaaaatcgtgtcacgaaatagctatcgtgacacgttttaaccaatgtcgaatgaacctcattctgtgctccaaatcgtgacacgttttcaacaatc 9953161  T
Q  234 gtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaa 332  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| ||||    
T  9953160 gtgacatgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaa 9953062  T
Q  333 aaatagtg-aatgactgactgtcatca 358  Q
    |||| ||| |||||| |||||||||||    
T  9953061 aaat-gtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 136 - 358
Target Start/End: Complemental strand, 34501636 - 34501416
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||| |||||| |||||| |||||||||||||||||| | |||||||| ||||||||||  | |||| ||||||||||||||||||||||||||||    
T  34501636 cctaaaattgtgtcatgaaatagccatcgtgacacgttttagctaatgtcgaatgaacctcatcctatgctccaaatcgtgacacgttttcaacaatcgt 34501537  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |||||||| ||||||| |||||||||||||||  || ||||||||||||||| |||||     
T  34501536 gacacaattttgctttcatcaaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactc--aacatcatgaaaatgacattaaaat 34501439  T
Q  336 tagtgaatgactgactgtcatca 358  Q
    ||  ||||||| |||||||||||    
T  34501438 taacgaatgacggactgtcatca 34501416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 136 - 357
Target Start/End: Complemental strand, 2371635 - 2371414
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||| |  ||||||  |||||  || || ||||||||||||||    
T  2371635 cctaaaatcgtgtcacgaaatagccatcatgacacgttttaaccaatgtcgaatgaacctcgtcctgtgctctaaatctcgatacattttcaacaatcgt 2371536  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    || ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| ||||||| ||||||| ||||||||| ||||  ||| ||||||    
T  2371535 gatacgattttgctttcttcaaaatcttctatttttcttgttttatttgctgtttaaacttgcttatgaactcaaaatatcataaaaaaaacattaaaaa 2371436  T
Q  336 tagtgaatgactgactgtcatc 357  Q
    |||||||| ||| ||| |||||    
T  2371435 tagtgaataactaactatcatc 2371414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 249 - 358
Target Start/End: Complemental strand, 31071603 - 31071494
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactg 348  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||  |||||||||    
T  31071603 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgctcgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactg 31071504  T
Q  349 actgtcatca 358  Q
    ||||||||||    
T  31071503 actgtcatca 31071494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 13004509 - 13004433
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaat 324  Q
    |||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||||    
T  13004509 tttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaat 13004433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 12991556 - 12991617
Alignment:
Q  260 tcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    ||||| ||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  12991556 tcttcaatttttcttgcttttcttgttgattaagcttgcttgtgaactccaaatatcatgaa 12991617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 267 - 358
Target Start/End: Complemental strand, 10289277 - 10289186
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| |||| |||||||||||||||  ||||||||| |||| ||| |||||||||| |||||||| ||||||||||    
T  10289277 tttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatagcgaatgacttactgtcatca 10289186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 321
Target Start/End: Complemental strand, 6512503 - 6512433
Alignment:
Q  251 tcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    |||||||||||||| | ||||| || |||| ||| ||||||||||||||||||||||| ||| ||||||||    
T  6512503 tcttcaaaatcttcaacttttcatgttttccttgctgtttaagcttgcttgtgaactcaaaagatcatgaa 6512433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 13022190 - 13022244
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    |||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  13022190 tttttcatgcttttcttgttgtttaagcttgcttgtgaactccaaatatcatgaa 13022244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 23007593 - 23007502
Alignment:
Q  30 cttgctccaaacgttgttccttttcct-tacgggtcagcccaattatttt-ctcatcttttctttttatattcacactacctaagacaagcac 120  Q
    ||||||||||| |||||| |||||||  ||| ||||||||||| |||||| ||||| || | ||||||||||||||| |||||||||||||||    
T  23007593 cttgctccaaatgttgtttcttttccaatacaggtcagcccaactatttttctcattttct-tttttatattcacaccacctaagacaagcac 23007502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 23780771 - 23780862
Alignment:
Q  30 cttgctccaaacgttgttccttttcct-tacgggtcagcccaattatttt-ctcatcttttctttttatattcacactacctaagacaagcac 120  Q
    ||||||||||| |||||| |||||||  ||| ||||||||||| |||||| ||||| || | ||||||||||||||| |||||||||||||||    
T  23780771 cttgctccaaatgttgtttcttttccaatacaggtcagcccaactatttttctcattttct-tttttatattcacaccacctaagacaagcac 23780862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 28112641 - 28112709
Alignment:
Q  249 tttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatca 317  Q
    |||||||||||||||| | ||||| ||||||| ||| | ||||||||||||||||||||| ||| ||||    
T  28112641 tttcttcaaaatcttcaacttttcatgctttccttgctttttaagcttgcttgtgaactcaaaagatca 28112709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 289 - 358
Target Start/End: Original strand, 28666107 - 28666176
Alignment:
Q  289 ttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||||||||| ||| |||||| |||| ||| |||||||||  |||||||||||||||||||    
T  28666107 ttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 209 - 241
Target Start/End: Original strand, 13004611 - 13004643
Alignment:
Q  209 aaatcgtgacacgttttcaacaatcgtgacacg 241  Q
    |||||||||||||||||||||||||||||||||    
T  13004611 aaatcgtgacacgttttcaacaatcgtgacacg 13004643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 11193450 - 11193501
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcat 318  Q
    |||||||||||||  ||  ||||||||||||||||||||||| |||||||||    
T  11193450 tttttcttgctttaattactgtttaagcttgcttgtgaactccaaatatcat 11193501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 5259159 - 5259114
Alignment:
Q  276 ctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaa 321  Q
    ||||| ||||||||||||||||||| ||||||| ||| ||||||||    
T  5259159 ctttccttgttgtttaagcttgcttctgaactcaaaagatcatgaa 5259114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 358
Target Start/End: Original strand, 12981159 - 12981188
Alignment:
Q  329 ctaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||||||||||||||||||||||||||    
T  12981159 ctaaaaatagtgaatgactgactgtcatca 12981188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 152; Significance: 4e-80; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 136 - 347
Target Start/End: Complemental strand, 291185 - 290974
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||||| ||||||| ||  |||||| ||||||||||||||||||||||||||||    
T  291185 cctaaaatcgtgttacgaaatagtcatcgtgacacgttttaaccaatgtcgaatgaaccttatcctgtgctccaaatcgtgacacgttttcaacaatcgt 291086  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaa 335  Q
    ||||| | ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||    
T  291085 gacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaacttaaaatatcatgaaaatgacactaaaaa 290986  T
Q  336 tagtgaatgact 347  Q
    ||||||||||||    
T  290985 tagtgaatgact 290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 240 - 358
Target Start/End: Original strand, 246232 - 246350
Alignment:
Q  240 cgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaaatag 338  Q
    ||||||||||||||||||||||||||||||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| ||||||||      
T  246232 cgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgt 246330  T
Q  339 tgaatgactgactgtcatca 358  Q
     ||||||| ||| |||||||    
T  246331 ggaatgacagaccgtcatca 246350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 114; Significance: 2e-57; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 136 - 277
Target Start/End: Complemental strand, 26467 - 26326
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||||    
T  26467 cctaaaaccgtgttacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaatcgt 26368  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgct 277  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  26367 gacacgattttgctttcttcaaaatcttctatttttcatgct 26326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 99; Significance: 2e-48; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 234 - 367
Target Start/End: Complemental strand, 18588 - 18454
Alignment:
Q  234 gtgacacgattttgctttcttcaaaa-tcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaa 332  Q
    |||||||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  18588 gtgacacgtttttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaatatcatgaaaatgacactaa 18489  T
Q  333 aaatagtgaatgactgactgtcatcaatgatcaac 367  Q
    ||| |||||||||||||||||||||| | ||||||    
T  18488 aaacagtgaatgactgactgtcatcagtcatcaac 18454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 136 - 362
Target Start/End: Complemental strand, 197453 - 197238
Alignment:
Q  136 cctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacgttttcaacaatcgt 235  Q
    ||||||||||||||| |||||| |||||||||||| |||||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||         
T  197453 cctaaaatcgtgtcatgaaatagccatcgtgacacattttaatcaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaaca----- 197359  T
Q  236 gacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacactaaaa 334  Q
          ||||| ||||||||||||||||||||||||||||||||  ||| || ||| ||||||||||||||||  ||||||||| |||| ||| ||||||    
T  197358 ------attttactttcttcaaaatcttctatttttcttgcttttcttgctgcttatgcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaa 197266  T
Q  335 atagtgaatgactgactgtcatcaatga 362  Q
    ||   ||||||| |||||||||||||||    
T  197265 atgtggaatgacagactgtcatcaatga 197238  T

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Target: scaffold0045 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 252 - 359
Target Start/End: Complemental strand, 89071 - 88964
Alignment:
Q  252 cttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgact 351  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||    
T  89071 cttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataacgaatgactgact 88972  T
Q  352 gtcatcaa 359  Q
    ||||||||    
T  88971 gtcatcaa 88964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 253 - 358
Target Start/End: Original strand, 369 - 474
Alignment:
Q  253 ttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatgaaaatgacactaaaaatagtgaatgactgactg 352  Q
    ||||||||||| |||||||| ||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||     
T  369 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactcaaaacatcatgaaaatgacactaaaaataaagaatgactgactt 468  T
Q  353 tcatca 358  Q
    ||||||    
T  469 tcatca 474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 64; Significance: 1e-27; HSPs: 3)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 4195 - 4422
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||    |  | |||||||||||||| ||||||  |||    
T  4195 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacgcttttcagtaat 4294  T
Q  233 cgtgacacgattttgctttcttcaaaatcttcta--tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacac 329  Q
    |||||||||| | | || | ||||   |||| ||  |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| |    
T  4295 cgtgacacga-tatcctcttttcagtttctt-tagttttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactc 4391  T
Q  330 taaaaatagtgaatgactgactgtcatcaat 360  Q
    ||||| ||| ||||||||||||| |||||||    
T  4392 taaaagtagcgaatgactgactgacatcaat 4422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 134 - 360
Target Start/End: Original strand, 11325 - 11552
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacacg-ttttcaacaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||    |  | |||||||||||||| ||||||  |||    
T  11325 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacgcttttcagtaat 11424  T
Q  233 cgtgacacgattttgctttcttcaaaatcttcta--tttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacac 329  Q
    |||||||||| | | || | ||||   |||| ||  |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| |||| ||| |    
T  11425 cgtgacacga-tatcctcttttcagtttctt-tagttttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcat-aaaaagactc 11521  T
Q  330 taaaaatagtgaatgactgactgtcatcaat 360  Q
    ||||| ||| ||||||||||||| |||||||    
T  11522 taaaagtagcgaatgactgactgacatcaat 11552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 358
Target Start/End: Original strand, 835 - 1060
Alignment:
Q  134 ttcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaacctcattatgtgcttcaaatcgtgacac-gttttcaacaat 232  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||    |  | |||||||||||||  ||||||  |||    
T  835 ttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaaccttatccaatattccaaatcgtgacacatttttcagtaat 934  T
Q  233 cgtgacacgattttgctttcttcaaaatcttc-tatttttcttgctttctttgttgtttaagcttgcttgtgaactc-gaaatatcatgaaaatgacact 330  Q
    |||||||||| |   || | ||||   |||||   |||||||||||||  ||| || ||||||||||||||||||||  ||||||||| ||||| || ||    
T  935 cgtgacacga-tgccctcttttcagtttcttcagttttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaat-actct 1032  T
Q  331 aaaaatagtgaatgactgactgtcatca 358  Q
    |||| ||| |||||||||||||||||||    
T  1033 aaaagtagcgaatgactgactgtcatca 1060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 6320 - 6387
Alignment:
Q  125 aaattaggattcctaaaatcgtgtcacgaaatatccatcgtgacacgttttaaccaatgtcgattgaa 192  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  6320 aaattagggttcctaaaatcgtgtcacgaaatagccatcgtgacacgttttaaccaatgtcgaatgaa 6387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 267 - 358
Target Start/End: Original strand, 6462 - 6554
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||||||||||||  |||||| |||||||||| ||||||||| ||| |||||| |||| ||| |||||||||| |||||||||||||||||||    
T  6462 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0757 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 267 - 359
Target Start/End: Complemental strand, 4654 - 4562
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcaa 359  Q
    ||||||||| |||  ||| || |||||||||||||||||||| ||| |||||| |||| ||| |||||||||||||||||||||||||||||||    
T  4654 tttttcttgattttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa-gactctaaaaatagtgaatgactgactgtcatcaa 4562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 38809 - 38862
Alignment:
Q  267 tttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaatatcatga 320  Q
    |||||| | |||| |||||||||||||||||||||||||||| ||||| |||||    
T  38809 tttttccttctttttttgttgtttaagcttgcttgtgaactccaaataccatga 38862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 268 - 358
Target Start/End: Original strand, 4790 - 4880
Alignment:
Q  268 ttttcttgctttctttgttgtttaagcttgcttgtgaactcgaaa-tatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    ||||||| |||| |||| || |||| |||| |||||||||| ||| |||||| |||| ||| |||||||||  |||||||||||||||||||    
T  4790 ttttctttctttttttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaa-gactctaaaaataacgaatgactgactgtcatca 4880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 7017 - 7055
Alignment:
Q  320 aaaatgacactaaaaatagtgaatgactgactgtcatca 358  Q
    |||| ||| ||||||||||||||||||||||||||||||    
T  7017 aaaaagactctaaaaatagtgaatgactgactgtcatca 7055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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