View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4156_low_3 (Length: 456)
Name: NF4156_low_3
Description: NF4156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4156_low_3 |
 |  |
|
| [»] scaffold1749 (1 HSPs) |
 |  |  |
|
| [»] scaffold0428 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 379; Significance: 0; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 1 - 445
Target Start/End: Original strand, 31161414 - 31161842
Alignment:
| Q |
1 |
ctccccgcacataaccattcatgactcagctagtttttcgagttgttcaacttgatcaacattgtcaagaattaaaagggactttacactacatagcctg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31161414 |
ctccccgcacataaccattcatgactcagctagtttttcgagttgttcaacttgatcaacattgtcaagaattaaaagggactttacactacatagcct- |
31161512 |
T |
 |
| Q |
101 |
cctactttgtttaaagttagatgcattgtaaagattgcatatctgaaggtatttttcacctagagtttgacatagagtttacttttgagcactgatcgga |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
31161513 |
---actttgtttaaagttagatgcattgtaaagattgcatatctgaaggtatttttcacctaga------------gtttacttttgagcactgatcgga |
31161597 |
T |
 |
| Q |
201 |
ccatcatgcctataaatttttcttagatcatcaataaggaagagcacaggaaattgatgaaagattttgttgtataatgcagtagcgatagctttcttcc |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31161598 |
ccatcatgcctataaatttttcttagatcatcaataaggaagagcacaggaaattgatgaaagattttgttgtataatgcagtagcgatagctttcttcc |
31161697 |
T |
 |
| Q |
301 |
ctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccatcccagc |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31161698 |
ctattccacccatcccacaaactcctacaacccgcacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccatcccagc |
31161797 |
T |
 |
| Q |
401 |
taaataatttggaagacttgtagacttgtaacccaatatattcat |
445 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
31161798 |
taaataatttggaagacttgtagacttgtaacccagtatattcat |
31161842 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 442
Target Start/End: Original strand, 31150106 - 31150545
Alignment:
| Q |
1 |
ctccccgcacataaccattcatgactca--gctagtttttcgagttgttcaacttgatcaacattgtcaagaattaaaagggactttacactacatagcc |
98 |
Q |
| |
|
|||||||||| |||||||||| || ||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| || || |
|
|
| T |
31150106 |
ctccccgcacctaaccattcacgattcacggctaatttctcgagttgttcaacttgatcaacattgtcaagaattataagggcctttacacagtgtaacc |
31150205 |
T |
 |
| Q |
99 |
tgcctactttgtttaaagttagatgcattgtaaagattgcatatctgaaggtatttttcacctagagtttgacatagagtttacttttgagcactgatcg |
198 |
Q |
| |
|
| ||||||| | |||||||| || ||||||| ||||||| ||||||| | || |||| ||||||||||| ||| || ||||||||||| || |
|
|
| T |
31150206 |
t----actttgtatcaagttagacgcgttgtaaatattgcatgtctgaagttgttcttcaactagagtttgatgcagaattagcttttgagcaccaatta |
31150301 |
T |
 |
| Q |
199 |
gaccatcatgcctataaatttttcttagatcatcaataaggaagagcacaggaaattgatgaaagattttgttgtataatgcagtagcgatagctttctt |
298 |
Q |
| |
|
||||||||| |||||||||||| |||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||| | | | |||| |
|
|
| T |
31150302 |
gaccatcatccctataaattttgcttagatcatcaataaggcagaacacaggaaattgatgagagattttgttgtatagaatagtagcaagggttgtctt |
31150401 |
T |
 |
| Q |
299 |
ccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccatccca |
398 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||| | |||||||||| ||| |||||||||||||||||||||||||| | | | |||||| |||||| |
|
|
| T |
31150402 |
ccctactccacccatcccacaaattcctacaacacggacatcatcaagcgagtccaaaagtaaatgtttttctaattcatgtagaggagaatgcatcccg |
31150501 |
T |
 |
| Q |
399 |
gctaaataatttggaagacttgtagacttgtaacccaatatatt |
442 |
Q |
| |
|
|||||| ||||||||| | | | ||||||||||||| ||||| |
|
|
| T |
31150502 |
actaaattttttggaagattagaaaacttgtaacccaacatatt |
31150545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 31476992 - 31476882
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||| | ||||||||||||| | || |||||||||| |
|
|
| T |
31476992 |
tcttccctattccacccatcccacaaattcctacaacatgaacatcatcaacagagtccaaaagtaaaagcttttctaattcttgtctaggagaatccat |
31476893 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
31476892 |
cccaactaaat |
31476882 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 361
Target Start/End: Original strand, 31019754 - 31019916
Alignment:
| Q |
199 |
gaccatcatgcctataaatttttcttagatcatcaataaggaagagcacaggaaattgatgaaagattttgttgtataatgcagtagcgatagctttctt |
298 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||||||||| | | || |||||||||| |||||| ||||| |||||||| | || | |||| |
|
|
| T |
31019754 |
gaccatcatgtctatatattttgcttagatcatcaataaaacaacgtgcatcaaattgatgagagatttgaccatataaagcagtagccagagttgtctt |
31019853 |
T |
 |
| Q |
299 |
ccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaa |
361 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
31019854 |
ccctattccacccatcccacaaattcctacaacccgaacatcatcaaccgagtccaaaagtaa |
31019916 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 31029731 - 31029797
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaa |
361 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||| |
|
|
| T |
31029731 |
tcttccctattccacccatcccacaaattcctacaacccgaacatcatcaaccgagtccaaaagtaa |
31029797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 31159299 - 31159365
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaa |
361 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| |
|
|
| T |
31159299 |
tcttccctattccacccatcccacaaattcctacaacccgaacatcatcaacggagtccaaaagtaa |
31159365 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 361
Target Start/End: Complemental strand, 31489792 - 31489630
Alignment:
| Q |
199 |
gaccatcatgcctataaatttttcttagatcatcaataaggaagagcacaggaaattgatgaaagattttgttgtataatgcagtagcgatagctttctt |
298 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||||||||| | | || |||||||||| |||||| ||||| |||||||| | || | |||| |
|
|
| T |
31489792 |
gaccatcatgtctatatattttgcttagatcatcaataaaacaacgtgcatcaaattgatgagagatttgaccatataaagcagtagccagagttgtctt |
31489693 |
T |
 |
| Q |
299 |
ccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaa |
361 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||| |
|
|
| T |
31489692 |
ccctattccacccatcccacaaattcctacaacccgaacatcatcaatggagtccaaaagtaa |
31489630 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 420
Target Start/End: Original strand, 31528459 - 31528584
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||| ||||||||||||| ||| ||| |||| || |||||||||||| ||||||||||||| | ||||| ||| |||| | ||||||| | | |
|
|
| T |
31528459 |
tcttccctactccacccatcccagaaattccaacaatcctaacatcatcaaccacatccaaaagtaaaagcttttccaatctttctatgagagaatgcgt |
31528558 |
T |
 |
| Q |
395 |
cccagctaaataatttggaagacttg |
420 |
Q |
| |
|
|||| |||||| ||||||||| |||| |
|
|
| T |
31528559 |
cccaactaaatcatttggaaggcttg |
31528584 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 365 - 442
Target Start/End: Original strand, 31034102 - 31034179
Alignment:
| Q |
365 |
tttttctaattcttctgtaagagaatccatcccagctaaataatttggaagacttgtagacttgtaacccaatatatt |
442 |
Q |
| |
|
|||||||||||||||| |||||||||| |||||| |||||| ||||||||||||| | || |||||||||| |||| |
|
|
| T |
31034102 |
tttttctaattcttctataagagaatcaatcccaactaaatcttttggaagacttgaaaaccggtaacccaatctatt |
31034179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 411
Target Start/End: Complemental strand, 31496945 - 31496829
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||| || | |||||| |||||| |||||||||||| | |||||||||| || || |||| ||||| |
|
|
| T |
31496945 |
tcttccctattcctcccatcccacaaattcctatgacacgaccatcattaaccgagtccaaaagtaaaagcttttctaatttttgcatatgagagtccat |
31496846 |
T |
 |
| Q |
395 |
cccagctaaataatttg |
411 |
Q |
| |
|
|||| |||||| ||||| |
|
|
| T |
31496845 |
cccaactaaatcatttg |
31496829 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 31502114 - 31502035
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaat |
374 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||| | ||||||||||| || ||||| |||||| ||||||||||| |
|
|
| T |
31502114 |
tcttccctattccacccatcccacagattcctacagcttgaacatcatcaacagagtccaagagtaaaagtttttctaat |
31502035 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 188
Target Start/End: Complemental strand, 31477176 - 31477102
Alignment:
| Q |
114 |
aagttagatgcattgtaaagattgcatatctgaaggtatttttcacctagagtttgacatagagtttacttttga |
188 |
Q |
| |
|
|||||||||||| || ||||||||||||||||| || |||||||| ||||||||| |||| ||| ||||||| |
|
|
| T |
31477176 |
aagttagatgcagtggaaagattgcatatctgattgtgattttcaccgagagtttgatgtagaatttgcttttga |
31477102 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Complemental strand, 31245353 - 31245308
Alignment:
| Q |
41 |
agttgttcaacttgatcaacattgtcaagaattaaaagggacttta |
86 |
Q |
| |
|
||||||||||||||||||||||| ||||||| || |||||| |||| |
|
|
| T |
31245353 |
agttgttcaacttgatcaacattatcaagaactataagggatttta |
31245308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1749 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold1749
Description:
Target: scaffold1749; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Original strand, 61 - 171
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| ||| | ||| |||||||||||| ||||||||| || | || |||| |||||||| |||||| || |
|
|
| T |
61 |
tcttccctattcctcccatcccccaaattcctataacacgaacaccatcaaccgaattcaaaagtaactgatgttttaatgcttctgtacgagaatttat |
160 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
161 |
cccaactaaat |
171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Original strand, 8822 - 8932
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| ||| | ||| |||||||||||| ||||||||| || | || |||| |||||||| |||||| || |
|
|
| T |
8822 |
tcttccctattcctcccatcccccaaattcctataacacgaacaccatcaaccgaattcaaaagtaactgatgttttaatgcttctgtacgagaatttat |
8921 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
8922 |
cccaactaaat |
8932 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 8571 - 8627
Alignment:
| Q |
43 |
ttgttcaacttgatcaacattgtcaagaattaaaagggactttacactacatagcct |
99 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| ||||| |||| ||| || |||||| |
|
|
| T |
8571 |
ttgttcaacttgatccacattatcaagaattagaagggtcttttcacgacttagcct |
8627 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 17438846 - 17438736
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| |||||||| |||| ||||| | | | ||| |||||||||| |||||||||||||| |||| |||| ||||| || |||||| || |
|
|
| T |
17438846 |
tcttccctattcctcccatcccccaaattcctatagcacgaacaccatcaaccgagtccaaaagtaaatgattttttaatgcttctatacgagaatttat |
17438747 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
17438746 |
cccaactaaat |
17438736 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 31560827 - 31560717
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| ||||| ||||||| ||||| ||| | ||| ||||| |||| |||||||| ||||| |||| |||| ||||| || |||||| || |
|
|
| T |
31560827 |
tcttccctattcctcccattccacaaattcctataacacgaacaccatcatccgagtccaaaagcaaatgattttgtaatgcttctataggagaattaat |
31560728 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
31560727 |
cccaactaaat |
31560717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 405
Target Start/End: Original strand, 33306548 - 33306658
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| ||||| ||| ||| ||||| | | || ||| ||||||||| |||||||| ||||| |||| |||| ||||| || ||||||| || |
|
|
| T |
33306548 |
tcttccctattcctcccattccagaaattcctatagcacaaacacaatcaaccgagtccaaaagcaaatgattttttaatgcttctataggagaatcaat |
33306647 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
33306648 |
cccaactaaat |
33306658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 31567146 - 31567036
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| ||||| ||||||| ||||| | | | ||| |||||| ||| |||||||| ||||| |||| ||| ||||| || ||||||| || |
|
|
| T |
31567146 |
tcttccctattccccccattccacaaattcctatagcacgaacaccatcaatcgagtccaaaagcaaatgattttgtaacgcttctataggagaatcaat |
31567047 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
31567046 |
cccaactaaat |
31567036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 405
Target Start/End: Original strand, 33412015 - 33412125
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
|||| |||||||| ||||| ||||||| ||| | | | || ||| |||||||||| |||||||||||||| |||| |||| ||||| | |||||| || |
|
|
| T |
33412015 |
tctttcctattccgcccattccacaaattccaatagcacaaacaccatcaaccgagtccaaaagtaaatgattttgtaatacttctatccgagaatttat |
33412114 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
33412115 |
cccaactaaat |
33412125 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 295 - 405
Target Start/End: Complemental strand, 33642620 - 33642510
Alignment:
| Q |
295 |
tcttccctattccacccatcccacaaactcctacaacccacacatcatcaaccgaatccaaaagtaaatgtttttctaattcttctgtaagagaatccat |
394 |
Q |
| |
|
||||||||||||| ||||| ||||||| ||||| | | | ||| ||||||| || |||||||| ||||| |||| |||| ||| | || ||||||| || |
|
|
| T |
33642620 |
tcttccctattcctcccattccacaaattcctatagcacgaacaccatcaactgagtccaaaagcaaatgattttgtaatgcttttataggagaatcaat |
33642521 |
T |
 |
| Q |
395 |
cccagctaaat |
405 |
Q |
| |
|
|||| |||||| |
|
|
| T |
33642520 |
cccaactaaat |
33642510 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 33264460 - 33264516
Alignment:
| Q |
43 |
ttgttcaacttgatcaacattgtcaagaattaaaagggactttacactacatagcct |
99 |
Q |
| |
|
||||||||||||||| ||||| |||||||||| ||||| |||| ||| || |||||| |
|
|
| T |
33264460 |
ttgttcaacttgatccacattatcaagaattagaagggtcttttcacgacttagcct |
33264516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University