View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4157_low_24 (Length: 203)

Name: NF4157_low_24
Description: NF4157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4157_low_24
NF4157_low_24
[»] chr8 (41 HSPs)
chr8 (1-187)||(3130081-3130245)
chr8 (1-103)||(19925629-19925726)
chr8 (1-61)||(11988268-11988328)
chr8 (1-89)||(12607151-12607234)
chr8 (3-92)||(37410841-37410925)
chr8 (3-92)||(42102180-42102264)
chr8 (1-61)||(34286518-34286578)
chr8 (1-61)||(42363271-42363331)
chr8 (1-92)||(35055494-35055579)
chr8 (1-61)||(218208-218268)
chr8 (1-61)||(694768-694828)
chr8 (1-61)||(698977-699037)
chr8 (1-61)||(731831-731891)
chr8 (1-61)||(855727-855787)
chr8 (1-61)||(25333655-25333715)
chr8 (1-57)||(34338341-34338397)
chr8 (1-61)||(38338805-38338865)
chr8 (1-98)||(2669720-2669812)
chr8 (4-61)||(36907598-36907655)
chr8 (1-61)||(9131082-9131142)
chr8 (1-61)||(14942496-14942556)
chr8 (1-61)||(19925343-19925403)
chr8 (1-61)||(24350473-24350533)
chr8 (1-61)||(24866905-24866965)
chr8 (1-61)||(30974061-30974121)
chr8 (1-61)||(32975759-32975819)
chr8 (2-61)||(9130971-9131030)
chr8 (31-61)||(24087273-24087303)
chr8 (31-61)||(35123163-35123193)
chr8 (1-61)||(25671844-25671902)
chr8 (8-61)||(42667076-42667129)
chr8 (1-61)||(3664207-3664267)
chr8 (1-49)||(9782255-9782303)
chr8 (1-61)||(10213767-10213827)
chr8 (1-61)||(16926682-16926742)
chr8 (1-61)||(16972310-16972370)
chr8 (1-61)||(25465801-25465861)
chr8 (1-61)||(29218205-29218265)
chr8 (33-61)||(29713281-29713309)
chr8 (5-61)||(32212969-32213025)
chr8 (1-61)||(38895731-38895791)
[»] chr6 (27 HSPs)
chr6 (1-98)||(10184252-10184344)
chr6 (1-92)||(32165189-32165275)
chr6 (1-106)||(9894847-9894947)
chr6 (1-98)||(34223446-34223539)
chr6 (1-61)||(17915017-17915077)
chr6 (1-61)||(32615369-32615429)
chr6 (1-58)||(10401760-10401817)
chr6 (1-102)||(23239319-23239415)
chr6 (1-61)||(1189455-1189515)
chr6 (1-61)||(1468246-1468306)
chr6 (1-61)||(21610003-21610063)
chr6 (1-61)||(22708358-22708418)
chr6 (1-61)||(2040135-2040195)
chr6 (1-61)||(32675843-32675903)
chr6 (1-92)||(4808643-4808729)
chr6 (2-61)||(9201675-9201734)
chr6 (3-54)||(23314775-23314826)
chr6 (3-54)||(23324942-23324993)
chr6 (1-92)||(29052405-29052490)
chr6 (11-61)||(10755237-10755287)
chr6 (1-43)||(15054557-15054599)
chr6 (3-61)||(35111304-35111362)
chr6 (1-98)||(8010967-8011058)
chr6 (1-61)||(2255806-2255866)
chr6 (1-61)||(10687382-10687442)
chr6 (1-61)||(10874056-10874116)
chr6 (1-61)||(17300708-17300768)
[»] chr4 (39 HSPs)
chr4 (1-92)||(47202897-47202983)
chr4 (1-98)||(46175901-46175993)
chr4 (1-61)||(4603286-4603346)
chr4 (1-61)||(23284745-23284805)
chr4 (1-92)||(15179889-15179975)
chr4 (1-92)||(17222901-17222987)
chr4 (1-102)||(19414187-19414283)
chr4 (1-98)||(39931466-39931558)
chr4 (1-106)||(42617144-42617244)
chr4 (1-57)||(15184618-15184674)
chr4 (3-98)||(41228977-41229067)
chr4 (1-61)||(11256615-11256675)
chr4 (32-106)||(19298046-19298117)
chr4 (1-92)||(22117425-22117511)
chr4 (1-61)||(2702669-2702729)
chr4 (1-61)||(3966801-3966861)
chr4 (1-61)||(9201722-9201782)
chr4 (1-61)||(18630849-18630909)
chr4 (1-61)||(22397259-22397319)
chr4 (1-61)||(23297507-23297567)
chr4 (1-61)||(29877711-29877771)
chr4 (1-61)||(34526291-34526351)
chr4 (1-61)||(38345776-38345836)
chr4 (1-89)||(41071422-41071505)
chr4 (1-61)||(48591378-48591438)
chr4 (1-61)||(48721892-48721952)
chr4 (1-92)||(11679055-11679141)
chr4 (1-92)||(11687334-11687420)
chr4 (7-61)||(897048-897102)
chr4 (75-109)||(8057172-8057206)
chr4 (1-59)||(36254992-36255050)
chr4 (1-62)||(18424231-18424292)
chr4 (1-61)||(52700497-52700558)
chr4 (1-61)||(2548001-2548061)
chr4 (1-61)||(8601273-8601333)
chr4 (1-61)||(22273852-22273912)
chr4 (1-61)||(22303167-22303227)
chr4 (1-61)||(35405756-35405815)
chr4 (33-61)||(55802028-55802056)
[»] chr1 (39 HSPs)
chr1 (1-98)||(17628347-17628439)
chr1 (1-98)||(19395846-19395938)
chr1 (1-61)||(3116016-3116076)
chr1 (1-92)||(8410205-8410291)
chr1 (3-92)||(15791457-15791541)
chr1 (1-98)||(42591454-42591546)
chr1 (1-109)||(32497183-32497286)
chr1 (1-92)||(17814262-17814348)
chr1 (1-98)||(5347226-5347318)
chr1 (1-61)||(5243358-5243418)
chr1 (1-61)||(22103181-22103241)
chr1 (1-61)||(37329366-37329426)
chr1 (1-92)||(15235089-15235175)
chr1 (1-91)||(15515276-15515361)
chr1 (1-61)||(15631976-15632036)
chr1 (1-61)||(22593361-22593421)
chr1 (9-61)||(35275852-35275904)
chr1 (1-108)||(9572696-9572798)
chr1 (1-61)||(4068187-4068247)
chr1 (1-57)||(6337714-6337770)
chr1 (1-61)||(8061963-8062023)
chr1 (1-61)||(12256678-12256738)
chr1 (1-61)||(19220245-19220305)
chr1 (1-61)||(37712139-37712199)
chr1 (1-57)||(45267538-45267594)
chr1 (1-61)||(48819371-48819431)
chr1 (1-61)||(51162341-51162401)
chr1 (1-60)||(3069809-3069868)
chr1 (2-61)||(37156874-37156933)
chr1 (22-61)||(52363826-52363865)
chr1 (1-100)||(22088329-22088419)
chr1 (5-61)||(391251-391308)
chr1 (1-61)||(46500954-46501015)
chr1 (1-61)||(10850020-10850080)
chr1 (1-61)||(16708871-16708931)
chr1 (1-61)||(16888920-16888980)
chr1 (1-61)||(26988220-26988280)
chr1 (1-61)||(41196664-41196724)
chr1 (1-61)||(50919559-50919619)
[»] chr7 (31 HSPs)
chr7 (1-98)||(16932852-16932944)
chr7 (1-98)||(16938235-16938327)
chr7 (1-98)||(16958887-16958979)
chr7 (1-102)||(35246741-35246837)
chr7 (1-105)||(44799474-44799573)
chr7 (1-92)||(991571-991657)
chr7 (1-59)||(22575658-22575716)
chr7 (1-61)||(23137117-23137177)
chr7 (1-61)||(28004655-28004715)
chr7 (1-61)||(29390505-29390565)
chr7 (1-58)||(24371379-24371436)
chr7 (1-49)||(2194008-2194056)
chr7 (1-61)||(14675914-14675974)
chr7 (1-61)||(22032834-22032894)
chr7 (1-61)||(29378717-29378777)
chr7 (2-62)||(46744026-46744086)
chr7 (1-67)||(18251472-18251538)
chr7 (1-98)||(44613395-44613487)
chr7 (1-61)||(7774701-7774761)
chr7 (1-61)||(14691253-14691313)
chr7 (1-61)||(19914017-19914077)
chr7 (1-61)||(47654368-47654428)
chr7 (1-92)||(1312185-1312271)
chr7 (4-61)||(34923008-34923065)
chr7 (29-61)||(1111349-1111381)
chr7 (1-61)||(12473425-12473485)
chr7 (1-61)||(25908366-25908426)
chr7 (1-61)||(33288029-33288089)
chr7 (5-61)||(38372634-38372690)
chr7 (5-92)||(39279505-39279588)
chr7 (1-49)||(47582530-47582578)
[»] chr5 (33 HSPs)
chr5 (1-61)||(5203388-5203448)
chr5 (1-110)||(16722098-16722202)
chr5 (1-98)||(20458480-20458572)
chr5 (1-62)||(43268589-43268650)
chr5 (1-61)||(26003069-26003129)
chr5 (1-62)||(41419573-41419634)
chr5 (1-61)||(11991376-11991436)
chr5 (1-61)||(28357213-28357273)
chr5 (1-61)||(28625552-28625612)
chr5 (1-61)||(41059743-41059803)
chr5 (8-61)||(24030293-24030346)
chr5 (1-61)||(1943067-1943127)
chr5 (13-61)||(4728928-4728976)
chr5 (1-61)||(5559873-5559933)
chr5 (1-61)||(7364263-7364323)
chr5 (1-61)||(11912056-11912116)
chr5 (1-61)||(13060556-13060616)
chr5 (1-61)||(17657314-17657374)
chr5 (1-61)||(29418706-29418766)
chr5 (9-92)||(780496-780574)
chr5 (6-61)||(11163236-11163291)
chr5 (1-60)||(15414064-15414123)
chr5 (7-98)||(15709814-15709900)
chr5 (1-61)||(38461234-38461296)
chr5 (1-60)||(38498640-38498699)
chr5 (60-102)||(1371914-1371956)
chr5 (31-61)||(17668480-17668510)
chr5 (9-58)||(42852101-42852150)
chr5 (5-61)||(2878631-2878687)
chr5 (1-61)||(13625474-13625534)
chr5 (1-61)||(27805987-27806047)
chr5 (1-61)||(29136780-29136840)
chr5 (1-61)||(35536917-35536976)
[»] chr3 (29 HSPs)
chr3 (1-61)||(29830593-29830653)
chr3 (1-61)||(37778205-37778265)
chr3 (1-92)||(17752059-17752145)
chr3 (1-92)||(19053379-19053465)
chr3 (1-92)||(29614265-29614351)
chr3 (3-92)||(3645376-3645460)
chr3 (4-57)||(53217998-53218051)
chr3 (1-61)||(40240531-40240591)
chr3 (3-61)||(20894576-20894634)
chr3 (1-99)||(38524160-38524253)
chr3 (1-61)||(1516052-1516112)
chr3 (1-61)||(20174894-20174954)
chr3 (1-61)||(42381214-42381274)
chr3 (1-61)||(42956133-42956193)
chr3 (1-61)||(48816787-48816847)
chr3 (1-106)||(32901062-32901162)
chr3 (1-61)||(22809147-22809207)
chr3 (1-61)||(42409928-42409988)
chr3 (1-56)||(29830717-29830772)
chr3 (1-112)||(33946458-33946564)
chr3 (2-61)||(40581030-40581089)
chr3 (32-61)||(12004395-12004424)
chr3 (1-90)||(43079864-43079948)
chr3 (1-61)||(48597820-48597881)
chr3 (4-61)||(52895359-52895416)
chr3 (1-61)||(585092-585152)
chr3 (5-61)||(34707667-34707723)
chr3 (1-61)||(45331249-45331309)
chr3 (1-61)||(47403716-47403776)
[»] chr2 (25 HSPs)
chr2 (1-61)||(446499-446559)
chr2 (1-61)||(10574115-10574175)
chr2 (1-92)||(22898285-22898371)
chr2 (3-61)||(32522000-32522058)
chr2 (1-98)||(21788529-21788621)
chr2 (5-61)||(30382223-30382279)
chr2 (2-61)||(38216092-38216151)
chr2 (1-62)||(12238439-12238500)
chr2 (1-58)||(42839278-42839335)
chr2 (1-61)||(887484-887544)
chr2 (1-61)||(4026997-4027057)
chr2 (9-61)||(5516156-5516208)
chr2 (1-61)||(12950069-12950129)
chr2 (1-61)||(19683644-19683704)
chr2 (1-61)||(23956218-23956278)
chr2 (1-61)||(29774817-29774877)
chr2 (1-61)||(32366221-32366281)
chr2 (1-61)||(40301431-40301490)
chr2 (1-61)||(42064923-42064983)
chr2 (6-61)||(8832534-8832589)
chr2 (1-98)||(11777056-11777148)
chr2 (1-61)||(2401576-2401636)
chr2 (1-61)||(2757040-2757100)
chr2 (5-61)||(7480853-7480909)
chr2 (1-61)||(36501469-36501529)
[»] scaffold0100 (1 HSPs)
scaffold0100 (1-61)||(38407-38467)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-61)||(40628-40684)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-61)||(242594-242654)
scaffold0004 (1-54)||(227779-227832)
[»] scaffold0332 (1 HSPs)
scaffold0332 (9-61)||(14700-14752)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-61)||(19627-19687)
[»] scaffold1130 (1 HSPs)
scaffold1130 (3-61)||(2325-2383)
[»] scaffold1367 (1 HSPs)
scaffold1367 (1-61)||(1130-1190)


Alignment Details
Target: chr8 (Bit Score: 107; Significance: 8e-54; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 3130081 - 3130245
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3130081 ttatgaagatacaattttcgttagatagatct----------aataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 3130170  T
Q  101 ggaccttaaagtggaatttagataacatggacattttaaaacaaaaagaagaaaattcaatgaaaacacaatagaatatatacacac 187  Q
    |||            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3130171 gga------------atttagataacatggacattttaaaacaaaaagaagaaaattcaatgaaaatacaatagaatatatacacac 3130245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19925629 - 19925726
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||||||||||||||||  ||| |||| |||||||||||||  ||||     |||||||| | |||||||||||||||||||||||||||| |    
T  19925629 ttatgaagatacaattttcgttagtgagagcttacaaattaaaataaatactta-----tttatttacataagctatttttcataagctcaatccaaacg 19925723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11988268 - 11988328
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||||| |||||||||    
T  11988268 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaagcatatttattt 11988328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12607151 - 12607234
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagct 89  Q
    ||||||||||||||||| ||||||  ||| |||||||||||||||||||||||||||||||     | | |||||||||||||||||||    
T  12607151 ttatgaagatacaatttccgttagtgagagcttataaattaaaataaaagcttatttattt-----acataagctatttttcataagct 12607234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 37410925 - 37410841
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||     | | ||||||||||||||||||||||    
T  37410925 atgaagatacaattttcgttagtaagaacttataaattaaaatataaacttatttattt-----acataagctatttttcataagctcaa 37410841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 42102180 - 42102264
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||||   |||  ||||||||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  42102180 atgaagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 42102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34286578 - 34286518
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  34286578 ttatgaagatacaattttcgttagggagaacttatgaattaatataaaagcttatttattt 34286518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42363331 - 42363271
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||| |||||||||||||||||||||||||||    
T  42363331 ttatgaagatacaatttttgttagtgagaacttttaaattaaaataaaagcttatttattt 42363271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 35055494 - 35055579
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||| |||||||||||||||||     | | ||||||||||||||||||||||    
T  35055494 ttatgaagatacaattttcgttagtgagagcttatgaattaaa-taaaagcttatttattt-----acataagctatttttcataagctcaa 35055579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 218268 - 218208
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||    
T  218268 ttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttattt 218208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 694828 - 694768
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||    
T  694828 ttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttattt 694768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 699037 - 698977
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||    
T  699037 ttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttattt 698977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 731891 - 731831
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||    
T  731891 ttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttattt 731831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 855787 - 855727
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| |||| ||||||    
T  855787 ttatgaagatacaattttcgttagtaatagcttataaattaaaataaaaacttacttattt 855727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25333715 - 25333655
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||| |||||| ||||||||||||||||||    
T  25333715 ttatgaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 25333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 34338397 - 34338341
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattt 57  Q
    |||||||||||||||||||||||| || | |||||| ||||| ||||||||||||||    
T  34338397 ttatgaagatacaattttcgttagttaaaacttatagattaacataaaagcttattt 34338341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38338865 - 38338805
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||  |||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  38338865 ttatgaagatatgattttcgttagtgagaacttataaattaaaataaaaacttatttattt 38338805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 2669720 - 2669812
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||| ||||| ||||| ||||   |||||||| |||||| |||||||||||||||||||      | ||||| ||||||||||||||||||||||    
T  2669720 ttatgaatatacatttttcattagtaggatcttatgaattaacataaaagcttatttatttt-----cataagctctttttcataagctcaatccaaa 2669812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 36907655 - 36907598
Alignment:
Q  4 tgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||||||||||||||||  ||||||||| |||||  ||||||||||||||||||    
T  36907655 tgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttattt 36907598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 9131142 - 9131082
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||   || ||||| |||||| ||||||| ||||||||||    
T  9131142 ttatgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttattt 9131082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14942496 - 14942556
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| ||||||| |||||  ||| |||||||||||| |||||| |||||||||||    
T  14942496 ttatgaagatgcaatttttgttagcaagaacttataaattaacataaaaccttatttattt 14942556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19925403 - 19925343
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  |||| |||| |||||| ||||||||||| ||||||    
T  19925403 ttatgaatatacaattttcgttagtaagatattatgaattaacataaaagcttaattattt 19925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24350533 - 24350473
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||||||||||  ||| ||||| |||||| |||||| |||||||||||    
T  24350533 ttatgaagatataattttcgttagtaagaacttatgaattaacataaaatcttatttattt 24350473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24866965 - 24866905
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| ||||||||||||||   ||| |||||||||||| |||||| |||||||||||    
T  24866965 ttatgaaggtacaattttcgttatcgagaacttataaattaagataaaaacttatttattt 24866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30974061 - 30974121
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||  |||||||||||||||  ||||||||| |||||  ||||||||||||||||||    
T  30974061 ttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttattt 30974121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32975759 - 32975819
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| ||| |  ||| ||||| |||||| ||||||||||||||||||    
T  32975759 ttatgaagatacaatttttgtttgtgagaacttatgaattaatataaaagcttatttattt 32975819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9131030 - 9130971
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   || ||||| |||||| ||||||| ||||||||||    
T  9131030 tatgaagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttattt 9130971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 24087273 - 24087303
Alignment:
Q  31 cttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||||||||||    
T  24087273 cttataaattaaaataaaagcttatttattt 24087303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 35123163 - 35123193
Alignment:
Q  31 cttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||||||||||    
T  35123163 cttataaattaaaataaaagcttatttattt 35123193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25671902 - 25671844
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||  ||||||  | | |||||||||||| ||||||||||||||||||    
T  25671902 ttatgaagatacaatt--cgttagtgaaaacttataaattaacataaaagcttatttattt 25671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 42667076 - 42667129
Alignment:
Q  8 gatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||| |||||||  | | |||||||||||||||||||| ||||||||||    
T  42667076 gatacaattctcgttagtaaaaacttataaattaaaataaaagtttatttattt 42667129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3664207 - 3664267
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| | ||||||||||   ||| ||||||||||||||||||| | |||||||||    
T  3664207 ttatgaagatgcgattttcgttaacgagagcttataaattaaaataaaaacctatttattt 3664267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9782255 - 9782303
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaa 49  Q
    ||||||| ||||||||||||||||  ||||||||| |||||| ||||||    
T  9782255 ttatgaatatacaattttcgttagtaagatcttatgaattaacataaaa 9782303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10213767 - 10213827
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||| |||||||| |||||  ||| ||||| |||||| ||| ||||||||||||||    
T  10213767 ttatgaagaaacaatttttgttagtgagaacttatgaattaacatacaagcttatttattt 10213827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16926742 - 16926682
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| |||| ||||||| ||||||  ||| |||||||||||| |||||| |||||||||||    
T  16926742 ttataaagaaacaatttccgttagtgagaacttataaattaacataaaaacttatttattt 16926682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16972370 - 16972310
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  | | ||||| ||| || ||||||| ||||||||||    
T  16972370 ttatgaagatacaattttcgttagtgataacttatgaatcaatataaaagtttatttattt 16972310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 25465861 - 25465801
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| ||||   | | ||||| |||||| ||||||||||||||||||    
T  25465861 ttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttattt 25465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29218265 - 29218205
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||||| ||||  |||  |||||||||||||||||| ||||| |||||    
T  29218265 ttatgaagatataattttcattagtgagagtttataaattaaaataaaaacttatgtattt 29218205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 61
Target Start/End: Original strand, 29713281 - 29713309
Alignment:
Q  33 tataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||||||||    
T  29713281 tataaattaaaataaaagcttatttattt 29713309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 32213025 - 32212969
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||| ||||||||| ||||  ||| |||||||| ||| ||||||||||||||||||    
T  32213025 gaagacacaattttcattagtgagaacttataaaataacataaaagcttatttattt 32212969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 38895731 - 38895791
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||| || |||||  | | |||||||||||| |||||| |||||||||||    
T  38895731 ttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaacttatttattt 38895791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 1e-24; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 10184344 - 10184252
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||| ||||||||||||||  ||| |||||||||||||||||||||||||||     ||||||| ||||||||||||||||||||||||||||    
T  10184344 ttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttattt-----atttatataagctatttttcataagctcaatccaaa 10184252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32165275 - 32165189
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||     | | ||||||||||||||||||||||    
T  32165275 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttattt-----acataagctatttttcataagctcaa 32165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 9894847 - 9894947
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||||  ||||||||||||||   ||| ||||||||||||||||||| |||||||||||     | | ||||||||||||||||||| ||||||||||    
T  9894847 ttatgaatttacaattttcgttattgagagcttataaattaaaataaaaacttatttattt-----acataagctatttttcataagcttaatccaaatg 9894941  T
Q  101 ggacct 106  Q
    ||||||    
T  9894942 ggacct 9894947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34223539 - 34223446
Alignment:
Q  1 ttatgaagatacaattttc-gttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||  |||||  ||| ||||||||||||||||||| |||||||||||     | | ||||||||||||||||||||||||||||    
T  34223539 ttatgaagatacaattttttgttagtgagagcttataaattaaaataaaaacttatttattt-----acataagctatttttcataagctcaatccaaa 34223446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17915017 - 17915077
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  ||| |||||| ||||||||||||||||||||||||    
T  17915017 ttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttattt 17915077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32615429 - 32615369
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| | |||||||||||||||||||||| ||||||    
T  32615429 ttatgaagatacaattttcgttagtgagagcatataaattaaaataaaagcttacttattt 32615369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10401817 - 10401760
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattta 58  Q
    |||| |||||||||||||||||||  ||| ||||||||||||||||||| ||||||||    
T  10401817 ttatcaagatacaattttcgttagtaagagcttataaattaaaataaaaacttattta 10401760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 23239319 - 23239415
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||| ||||||| |||| ||||  ||| ||||| |||||| ||||||||||||||||||   |     ||||||||||||||||||||||||||||||    
T  23239319 ttatgacgatacaactttccttagtgagaacttatgaattaatataaaagcttatttatttgcat-----aagctatttttcataagctcaatccaaatg 23239413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1189455 - 1189515
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||| ||||||||||  |||  |||||||||||||| |||||||||||||||    
T  1189455 ttatgaagatacacttttcgttagtgagagtttataaattaaaattaaagcttatttattt 1189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1468246 - 1468306
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||| || |||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  1468246 ttatgaagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttattt 1468306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21610063 - 21610003
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||| ||||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  21610063 ttatgaatatataattttcgttagtaagaacttataaattaaaataaaaacttatttattt 21610003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22708358 - 22708418
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||   ||  |||||||||||||||||| |||||||||||    
T  22708358 ttatgaagatacaattttcgttagtgggagtttataaattaaaataaaaacttatttattt 22708418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2040195 - 2040135
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||| |||||||||| |||| |||| |||||||||||| |||||| |||||||||||    
T  2040195 ttataaagttacaattttcattagttagaacttataaattaatataaaaacttatttattt 2040135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 32675903 - 32675843
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  ||| ||||| |||||| |||||| |||||||||||    
T  32675903 ttatgaagatacaattttcattagtgagaacttatgaattaatataaaaacttatttattt 32675843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4808643 - 4808729
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||| ||||||||  ||  ||||||||||||||||||| ||||      |||| || | ||||||||||||||||||||||    
T  4808643 ttatgaagatacaatattcgttagtaagggcttataaattaaaataaaaactta-----cttatatacataagctatttttcataagctcaa 4808729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 9201734 - 9201675
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||| ||||||||| ||||||  ||| ||||| |||||| ||||||||||||||||||    
T  9201734 tatgaaaatacaatttccgttagtgagaacttatgaattaacataaaagcttatttattt 9201675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 23314826 - 23314775
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagctta 54  Q
    ||||| ||||| ||||||||||  ||| ||||||||||||||||||||||||    
T  23314826 atgaatatacagttttcgttagtcagagcttataaattaaaataaaagctta 23314775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 23324993 - 23324942
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagctta 54  Q
    ||||| ||||| ||||||||||  ||| ||||||||||||||||||||||||    
T  23324993 atgaatatacagttttcgttagtcagagcttataaattaaaataaaagctta 23324942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29052405 - 29052490
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||| ||||||||| ||||| |  ||| ||||||||||||||||||| ||||     |||||||| | ||||||||||||||||||||||    
T  29052405 ttatgatgatacaattctcgtttgtgagagcttataaattaaaataaaa-ctta-----tttatttacataagctatttttcataagctcaa 29052490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 10755287 - 10755237
Alignment:
Q  11 acaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  10755287 acaattttcgttagtaagaacttatgaattaacataaaagcttatttattt 10755237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15054599 - 15054557
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaa 43  Q
    |||||||||||||||||||||||| || | |||||||||||||    
T  15054599 ttatgaagatacaattttcgttagttaaaacttataaattaaa 15054557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 35111362 - 35111304
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||  ||| ||||  |||||| ||||||| ||||||||||    
T  35111362 atgaagatacaattttcgttagcgagaacttacgaattaagataaaagtttatttattt 35111304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8011058 - 8010967
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||| ||||||||||||||||  ||||||||| || ||| |||||||||||      ||||||  | ||||| ||||||||||||||||||||||    
T  8011058 ttatgaatatacaattttcgttagtaagatcttatgaa-taacataaaagctta-----attatttgcataagctttttttcataagctcaatccaaa 8010967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 2255806 - 2255866
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| | |||  ||| | ||| |||||| ||||||||||||||||||    
T  2255806 ttatgaagatacaatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10687382 - 10687442
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||| ||||||||||||||||||  ||| ||||| || | | ||||||||||||||||||    
T  10687382 ttatggagatacaattttcgttagcgagaacttatgaactgacataaaagcttatttattt 10687442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 10874056 - 10874116
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| ||| |  | | ||||| |||||| ||||||||||||||||||    
T  10874056 ttatgaagatacaattttagttggtgaaaacttatgaattaacataaaagcttatttattt 10874116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17300768 - 17300708
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||| |||||||||  | | |||||||||||||||||||  ||||||||||    
T  17300768 ttatgaatatacaactttcgttagtgacaacttataaattaaaataaaaagttatttattt 17300708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 47202897 - 47202983
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||      ||||||||| ||| ||||||||||||||||||    
T  47202897 ttatgaagatacaattttcgttagtgagatcttataaattaaaataaaagctta-----cttatttatataagttatttttcataagctcaa 47202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 46175993 - 46175901
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    |||||||||||||||||||| |||  ||| |||||||||||||||||| ||||||||||||     | | ||| ||||||||||||||||||||||||    
T  46175993 ttatgaagatacaattttcgctagtaagagcttataaattaaaataaatgcttatttattt-----acataagttatttttcataagctcaatccaaa 46175901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4603346 - 4603286
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  |||  ||||||||||||||||||||||||||||||    
T  4603346 ttatgaagatacaattttcgttagtgagagtttataaattaaaataaaagcttatttattt 4603286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23284805 - 23284745
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  23284805 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaaacttatttattt 23284745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 15179889 - 15179975
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||| ||||||||||||||||  ||| |||||| ||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  15179889 ttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 15179975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17222901 - 17222987
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||||||| |||| ||||| |||||| |||||| ||||||||||| |     | ||||||||||||||||||||||    
T  17222901 ttatgaagatacaattttcgttagttagaacttatgaattaacataaaaacttatttatttga-----ataagctatttttcataagctcaa 17222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 19414187 - 19414283
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||| |||||||||||||||||||  ||| |||||||| ||||||||||||||||||||||     | | |||||||||||||||| |||||  ||||||    
T  19414187 ttattaagatacaattttcgttagtgagagcttataaagtaaaataaaagcttatttattt-----acataagctatttttcataaactcaaaacaaatg 19414281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 39931558 - 39931466
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  ||| |||||||| |||||||||| |||||||||||     | | | |||||||||||||||||||| |||||    
T  39931558 ttatgaagatacaattttcgttagtgagagcttataaaataaaataaaaacttatttattt-----acatatgctatttttcataagctcaaaccaaa 39931466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 42617244 - 42617144
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||||||||  |||||||||||  | | ||||||||||||||||||| |||||||||||     | | |||||||||||||||||||||| ||||| |    
T  42617244 ttatgaagatatgattttcgttagtgaaaacttataaattaaaataaaaacttatttattt-----acataagctatttttcataagctcaaaccaaacg 42617150  T
Q  101 ggacct 106  Q
    ||||||    
T  42617149 ggacct 42617144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15184618 - 15184674
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattt 57  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||    
T  15184618 ttatgaagatacaattttcgttagtgagaacttataaattaaaataaaaacttattt 15184674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 3 - 98
Target Start/End: Original strand, 41228977 - 41229067
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||| |||| |||| ||||| |||||| ||||||||     || |||||||  | ||||||||||||||||||||||||||||    
T  41228977 atgaagatacaattttcattagttagaacttatgaattaatataaaagc-----taatttatttgcataagctatttttcataagctcaatccaaa 41229067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11256675 - 11256615
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| ||||||||||||||||||    
T  11256675 ttatgaagatacaattttagttagcgagaacttatgaattaacataaaagcttatttattt 11256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 19298117 - 19298046
Alignment:
Q  32 ttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatgggacct 106  Q
    |||||||||||||||||||||||| |   ||||||| | |||||||||||||||| ||||| ||||||| |||||    
T  19298117 ttataaattaaaataaaagcttatat---ttatttacataagctatttttcataaactcaaaccaaatgtgacct 19298046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22117425 - 22117511
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||| || |||||||||||||  ||| |||||| |||||||||||||||||     | |||||| | ||||||||||||||||||||||    
T  22117425 ttatgaaaatgcaattttcgttagtcagaacttatagattaaaataaaagctta-----tctatttacataagctatttttcataagctcaa 22117511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2702729 - 2702669
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||| ||||  ||||||||| |||||| ||||||||||| ||||||    
T  2702729 ttatgaatatacaattttcattagtaagatcttatgaattaacataaaagcttaattattt 2702669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3966801 - 3966861
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| |  ||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  3966801 ttatgaagatgcggttttcgttagcgagagcttataaattaaaataaaaacttatttattt 3966861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9201722 - 9201782
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||   |||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  9201722 ttatgaagatgtgattttcgttagcgagagcttataaattaaaataaaaacttatttattt 9201782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18630909 - 18630849
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| | ||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  18630909 ttatgaagataaagttttcgttagtgagaacttatgaattaatataaaagcttatttattt 18630849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22397319 - 22397259
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  ||||||||| ||||||  |||||||||| ||||||    
T  22397319 ttatgaatatacaattttcgttagtaagatcttatgaattaacttaaaagcttaattattt 22397259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 23297507 - 23297567
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||||| |||||  ||||||||||||||||||    
T  23297507 ttatgaagatacaatttttgttagcgagaacttatgaattagcataaaagcttatttattt 23297567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29877711 - 29877771
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| |||||||||||| |||||    
T  29877711 ttatgaagatacaatttttgttagtgagaacttatgaattaacataaaagcttatatattt 29877771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 34526351 - 34526291
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||  |||  ||| ||||| |||||| ||||||||||||||||||    
T  34526351 ttatgaagatacaattttccatagtgagaacttatgaattaacataaaagcttatttattt 34526291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38345836 - 38345776
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||  ||||  ||| ||||| |||||| ||||||||||||||||||    
T  38345836 ttatgaagatacaatttttattagccagaacttatgaattaacataaaagcttatttattt 38345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41071422 - 41071505
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagct 89  Q
    |||||||| ||||||| || ||||  ||| ||| |||||||| ||||||||||||||||||| ||     |||||||||||||||||||    
T  41071422 ttatgaagttacaattctcattagtgagaacttgtaaattaacataaaagcttatttattttctt-----aagctatttttcataagct 41071505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48591438 - 48591378
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   ||| ||||| ||||||  |||||||||||||||||    
T  48591438 ttatgaagatacaattttcgttaatgagaacttatgaattaacgtaaaagcttatttattt 48591378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48721892 - 48721952
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| |||||| |||||  ||| ||||| |||||| ||||||||||||||||||    
T  48721892 ttatgaagatataatttttgttagtgagaacttatgaattaatataaaagcttatttattt 48721952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11679141 - 11679055
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||||||| || |  ||||||||||| |||||     || | |||||||| || ||||||||||| ||||||||||    
T  11679141 ttatgaagatacaattttcgttagttaaaatttataaattaacataaa-----atgttttttatttgtataagctatttttgataagctcaa 11679055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11687420 - 11687334
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||||||| || |  ||||||||||| |||||     || | |||||||| || ||||||||||| ||||||||||    
T  11687420 ttatgaagatacaattttcgttagttaaaatttataaattaacataaa-----atgttttttatttgtataagctatttttgataagctcaa 11687334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 897048 - 897102
Alignment:
Q  7 agatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||| |||||||||||  | | |||||||||||| ||||||||||||||||||    
T  897048 agatacgattttcgttagtgaaaacttataaattaatataaaagcttatttattt 897102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 109
Target Start/End: Original strand, 8057172 - 8057206
Alignment:
Q  75 tatttttcataagctcaatccaaatgggaccttaa 109  Q
    |||||||||||||||||||||||| ||||||||||    
T  8057172 tatttttcataagctcaatccaaacgggaccttaa 8057206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36255050 - 36254992
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttat 59  Q
    ||||||||||||||||||  ||||  ||| ||||| |||||| ||||||||||||||||    
T  36255050 ttatgaagatacaattttaattagtgagaacttatgaattaacataaaagcttatttat 36254992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 18424292 - 18424231
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatttt 62  Q
    |||||||||||||||||| ||||   | | ||||| |||||| |||||||||||||||||||    
T  18424292 ttatgaagatacaatttttgttattgaaaacttatgaattaacataaaagcttatttatttt 18424231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 52700558 - 52700497
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttat-aaattaaaataaaagcttatttattt 61  Q
    |||||||||||| |||||||||||  ||| ||||| ||||||| ||||||| ||||||||||    
T  52700558 ttatgaagatacgattttcgttagtaagaacttataaaattaacataaaagattatttattt 52700497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2548061 - 2548001
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| |||||||| ||   ||| |||||||||||| |||||| |||||||||||    
T  2548061 ttatgaagataaaattttcgctaatgagaacttataaattaatataaaaacttatttattt 2548001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8601273 - 8601333
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  | |  ||||||||||| || |||||||||||||||    
T  8601273 ttatgaagatacaatttttgttagtgaaaaattataaattaacattaaagcttatttattt 8601333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22273852 - 22273912
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  |||  |||| |||||| ||||||| ||||||||||    
T  22273852 ttatgaagatacaatttttgttagtgagaagttatgaattaacataaaagtttatttattt 22273912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22303167 - 22303227
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  | |  |||||||||||||||||| ||||| |||||    
T  22303167 ttatgaagatacaattttcattagtgaaagtttataaattaaaataaaaacttatatattt 22303227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35405756 - 35405815
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||||||||||  ||| || || |||||| ||||||||||||||||||    
T  35405756 ttatgaagatagaattttcgttagtaagacct-attaattaacataaaagcttatttattt 35405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 61
Target Start/End: Complemental strand, 55802056 - 55802028
Alignment:
Q  33 tataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||||||||    
T  55802056 tataaattaaaataaaagcttatttattt 55802028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 17628439 - 17628347
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||     | | |||||||||||||||||||||| |||||    
T  17628439 ttatgaagatacaattttcgttagtgagagcttctaaattaaaataaaagcttatttattt-----acataagctatttttcataagctcaaaccaaa 17628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 19395846 - 19395938
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||| ||||||||| |     ||| ||||||||||||||||||||||||||||    
T  19395846 ttatgaagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatat-----atataagctatttttcataagctcaatccaaa 19395938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 3116076 - 3116016
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||    
T  3116076 ttatgaagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttattt 3116016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 8410205 - 8410291
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| ||| |||||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  8410205 ttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaagcttatttattt-----acagaagctatttttcataagctcaa 8410291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 15791457 - 15791541
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||||   ||| |||||||||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  15791457 atgaagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 15791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 42591454 - 42591546
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||| ||||||||||  | | ||||||||||||||||||| |||||||||||     | | ||||||||||||||||||||||||||||    
T  42591454 ttatgaagatacacttttcgttagtgaaagcttataaattaaaataaaaacttatttattt-----acataagctatttttcataagctcaatccaaa 42591546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 32497286 - 32497183
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||| |||||||||||||||||  ||| |||||||||||||||||||| ||||||||||     | | ||||||||||||||||||||||  |||| |    
T  32497286 ttatgaggatacaattttcgttagtgagagcttataaattaaaataaaagtttatttattt-----acataagctatttttcataagctcaaatcaaacg 32497192  T
Q  101 ggaccttaa 109  Q
    || ||||||    
T  32497191 gggccttaa 32497183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 17814262 - 17814348
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||| ||||||||||||||||  ||| |||||| ||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  17814262 ttatgaaaatacaattttcgttagtcagaacttatagattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 17814348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 5347226 - 5347318
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||| |||||||||||||||   ||| |||||| ||||||||||||||||||||||||     | | |||||||||||||||||||||| |||||    
T  5347226 ttatgaaaatacaattttcgttaatcagaacttatagattaaaataaaagcttatttattt-----acataagctatttttcataagctcaaaccaaa 5347318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5243418 - 5243358
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   ||| | |||||||||||||||||||||||||||||    
T  5243418 ttatgaagatacaattttcgttacggagagcatataaattaaaataaaagcttatttattt 5243358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22103181 - 22103241
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||||||||||||| |||| |||||| |||||||||||||||| |||||||    
T  22103181 ttatgaaaatacaattttcgttagttagaacttatagattaaaataaaagcttctttattt 22103241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 37329426 - 37329366
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||| |  ||| |||||||||||| ||||||||||||||||||    
T  37329426 ttatgaagatacaattttcgttggtgagaacttataaattaacataaaagcttatttattt 37329366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 15235175 - 15235089
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||| || |||||||||||  ||| ||||||||||||||||||| |||||||||||     | | ||||||||||||||||||||||    
T  15235175 ttatgaagaaaccattttcgttagtaagagcttataaattaaaataaaaacttatttattt-----acataagctatttttcataagctcaa 15235089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15515361 - 15515276
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctca 91  Q
    ||||||||||||||||||||||||  ||| ||||| |||||| || |||||||||||||||  ||     |||||||||||||||||||||    
T  15515361 ttatgaagatacaattttcgttagtgagaacttatgaattaacatgaaagcttatttatttactt-----aagctatttttcataagctca 15515276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15631976 - 15632036
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  ||| | ||||||||||||||||| |||||||||||    
T  15631976 ttatgaaaatacaattttcgttagtgagagcatataaattaaaataaaaacttatttattt 15632036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22593421 - 22593361
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||||||||||||| |||||  ||| |||||||||||| ||||||||||||||||||    
T  22593421 ttataaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttattt 22593361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 35275904 - 35275852
Alignment:
Q  9 atacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||  |||| ||||||||||||||||||| ||||||||||    
T  35275904 atacaattttcgttagtgagattttataaattaaaataaaagtttatttattt 35275852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 9572798 - 9572696
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||| | |||| |||||  ||| ||||| |||||| ||||||||||||||||||   |     |||||||||||||||||||||||||||| |    
T  9572798 ttatgaagataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcat-----aagctatttttcataagctcaatccaaacg 9572704  T
Q  101 ggacctta 108  Q
    || |||||    
T  9572703 gggcctta 9572696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4068187 - 4068247
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||| |||||||||||  ||| ||||| |||||| ||||||| ||||||||||    
T  4068187 ttatgaagatactattttcgttagtgagaacttatgaattaatataaaagtttatttattt 4068247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 6337770 - 6337714
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattt 57  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| ||||||||||||||    
T  6337770 ttatgaagatacaatttttgttagcgagaacttatgaattaacataaaagcttattt 6337714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8062023 - 8061963
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| || |  ||| |||||||||||||||||||  ||||||||||    
T  8062023 ttatgaagatacaattttcatttgtgagagcttataaattaaaataaaaatttatttattt 8061963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12256678 - 12256738
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| |||||||||||||||  ||| ||||| |||||||||||||  ||||||||||    
T  12256678 ttatgaaggtacaattttcgttagtaagaacttatgaattaaaataaaaatttatttattt 12256738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19220245 - 19220305
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| ||||||||| ||   |||  ||||||||||||||||||||||||||||||    
T  19220245 ttatgaagatgcaattttcgataatgagagattataaattaaaataaaagcttatttattt 19220305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37712139 - 37712199
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| |||||||||  ||| ||||| |||||| ||||||| ||||||||||    
T  37712139 ttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttattt 37712199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 45267538 - 45267594
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattt 57  Q
    ||||||||||||||||||||||||  ||| ||||| ||| || ||||||||||||||    
T  45267538 ttatgaagatacaattttcgttagtaagaacttatgaataaacataaaagcttattt 45267594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48819371 - 48819431
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||| |||| |||||  ||| ||||| |||||| ||||||||||||||||||    
T  48819371 ttatgaagatacattttttgttagtgagaacttatgaattaacataaaagcttatttattt 48819431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 51162341 - 51162401
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||||||||||||   |||||||||||||||| ||||||| ||| ||||||    
T  51162341 ttatgaatatacaattttcgttaataagatcttataaattaacataaaagtttaattattt 51162401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3069868 - 3069809
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatt 60  Q
    |||||||||||||||||||  |||  ||| ||||| |||||| |||||||||||||||||    
T  3069868 ttatgaagatacaattttcactagtgagaacttatgaattaacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 37156933 - 37156874
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||| |||||||||||| |||  ||||||||| |||||| ||||||||||| ||||||    
T  37156933 tatgaatatacaattttcgctagtaagatcttatgaattaacataaaagcttaattattt 37156874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 52363865 - 52363826
Alignment:
Q  22 tagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||| |||||||||||||||||||||||||||||||    
T  52363865 tagagagaacttataaattaaaataaaagcttatttattt 52363826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 22088419 - 22088329
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||||||||||||||| || |||     |||||||||||||||||||| ||||||||||     | | ||||||||||||||||| |||| |||||||    
T  22088419 ttatgaagatacaattttagtgagag----cttataaattaaaataaaaggttatttattt-----acataagctatttttcataagttcaaaccaaatg 22088329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 391251 - 391308
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaat-aaaagcttatttattt 61  Q
    ||||||||||||||||||||  ||| ||||| |||||| || ||||||||||||||||    
T  391251 gaagatacaattttcgttagcgagaacttatgaattaacataaaaagcttatttattt 391308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 46501015 - 46500954
Alignment:
Q  1 ttatgaagatacaattttc-gttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| |||||  | | ||||||||| || ||||||||||||||||||    
T  46501015 ttatgaagatacaattttccgttagtgaaaacttataaatcaacataaaagcttatttattt 46500954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10850080 - 10850020
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||||||||||||   | | |||||||||||| || |||||||||||||||    
T  10850080 ttatgaaaatacaattttcgttaatgaaaacttataaattaacatgaaagcttatttattt 10850020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16708871 - 16708931
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||| ||||  ||||||||| |||||| ||||||  ||||||||||    
T  16708871 ttatgaatatacaattttcattagtaagatcttatgaattaacataaaaatttatttattt 16708931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16888980 - 16888920
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  |||  |||| | |||| ||||||||||||||||||    
T  16888980 ttatgaagatacaattttcattagtgagaatttatgacttaacataaaagcttatttattt 16888920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26988220 - 26988280
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||| |||||||  | | ||||| |||||| ||||||||| ||||||||    
T  26988220 ttatgaagatacaattgtcgttagtaaaaacttatgaattaacataaaagctaatttattt 26988280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41196724 - 41196664
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||| | |||||| ||||| ||||||||||||    
T  41196724 ttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggcttatttattt 41196664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 50919559 - 50919619
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   | | || ||||||||| || |||||||||||||||    
T  50919559 ttatgaagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttattt 50919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16932944 - 16932852
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  | | |||||||||||||||||||||||||     |||| || | |||||||||||||||||||||| |||||    
T  16932944 ttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttat-----ttatatacataagctatttttcataagctcaaaccaaa 16932852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 16938327 - 16938235
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  | | |||||||||||||||||||||||||     |||| || | |||||||||||||||||||||| |||||    
T  16938327 ttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagcttat-----ttatatacataagctatttttcataagctcaaaccaaa 16938235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 16958887 - 16958979
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||||     ||||| || | |||||||||||||||||||||| |||||    
T  16958887 ttatgaagatacaattttcgttagtaaaagcttataaattaaaataaaagctta-----tttatatacataagctatttttcataagctcaaaccaaa 16958979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 35246741 - 35246837
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    |||||| |||||||||||||||||  ||  |||||||||||||||||||||||||||||||     | | | |||||||||||||||||||| |||||||    
T  35246741 ttatgaggatacaattttcgttagtgagggcttataaattaaaataaaagcttatttattt-----acataggctatttttcataagctcaaaccaaatg 35246835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44799474 - 44799573
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||| ||| ||||||||  ||| ||||||||||||||||||| |||||||||||     | | || ||||||||||||||||||||| |||||    
T  44799474 ttatgaagatagaatattcgttagtgagagcttataaattaaaataaaaacttatttattt-----acataaactatttttcataagctcaatctaaatg 44799568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 991571 - 991657
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||| ||||||||||  |||  ||||||||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  991571 ttatgaagatacacttttcgttagtgagagtttataaattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 991657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 22575658 - 22575716
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttat 59  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||    
T  22575658 ttatgaagatacaattttcgttagtaagagcttataaattaaaataaaaacttatttat 22575716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23137177 - 23137117
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  ||| |||||||||||||||||||||||| ||||||    
T  23137177 ttatgaagatacaattttcattagtgagagcttataaattaaaataaaagcttacttattt 23137117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28004655 - 28004715
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| |||||| ||  ||| |||||||||||||||||||||||||||||||    
T  28004655 ttatgaagatacaaatttcgtcagcaagagcttataaattaaaataaaagcttatttattt 28004715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29390565 - 29390505
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||| ||||  |||| |||||| ||||||||||||||||||    
T  29390565 ttatgaagatacaattttcgttagctagaatttatgaattaacataaaagcttatttattt 29390505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 24371436 - 24371379
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattta 58  Q
    ||||||||||||||||||||||||  ||| |||||||| |||||||||| ||||||||    
T  24371436 ttatgaagatacaattttcgttagtgagagcttataaaataaaataaaaacttattta 24371379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2194056 - 2194008
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaa 49  Q
    ||||||||||| |||||||||||| |||| |||||||||||||||||||    
T  2194056 ttatgaagatataattttcgttagttagaacttataaattaaaataaaa 2194008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14675974 - 14675914
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  | | ||||||||||||||||||| |||||||||||    
T  14675974 ttatgaagatacaattttcattagcgaaagcttataaattaaaataaaaacttatttattt 14675914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22032834 - 22032894
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| |||||||||||||||  ||| |||||||||||| |||||| |||||||||||    
T  22032834 ttatgaaggtacaattttcgttagtgagaacttataaattaagataaaaacttatttattt 22032894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29378717 - 29378777
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||| ||||||  |||||||||||||||||    
T  29378717 ttatgaagatacaattttcgttagtaagaacttatgaattaacgtaaaagcttatttattt 29378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 62
Target Start/End: Original strand, 46744026 - 46744086
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatttt 62  Q
    |||||||||||||||||||||||  ||| ||||  |||||| |||||||||||||||||||    
T  46744026 tatgaagatacaattttcgttagtgagaacttacgaattaacataaaagcttatttatttt 46744086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18251538 - 18251472
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttattta 67  Q
    ||||||| ||||||||||||||||  | |||||||||||||| ||||||  ||||||||||| ||||    
T  18251538 ttatgaatatacaattttcgttagcaaaatcttataaattaacataaaaatttatttatttttttta 18251472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 44613487 - 44613395
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    |||||| |||||||||||  |||  |||| ||||| |||||| ||||||||||||||     ||||  | ||||||||||||||||||||||||||||    
T  44613487 ttatgacgatacaatttttattaattagaacttatgaattaatataaaagcttattt-----atttgcataagctatttttcataagctcaatccaaa 44613395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7774761 - 7774701
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||| |  |||  |||||||||||| |||||| ||||||||||    
T  7774761 ttatgaagatacaattttcgttggtgagagtttataaattaaattaaaagtttatttattt 7774701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 14691313 - 14691253
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||||||||||  ||| ||||| |||||| ||||||| ||||||||||    
T  14691313 ttatgaagatataattttcgttagtgagaacttatgaattaacataaaaggttatttattt 14691253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19914017 - 19914077
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||| | ||||||||||||  | | |||||| ||||||||||||||||||||||||    
T  19914017 ttatgaagagataattttcgttagtaaaagcttatatattaaaataaaagcttatttattt 19914077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47654428 - 47654368
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| |||||||||||||||  ||| ||||| |||||| |||||| |||||||||||    
T  47654428 ttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttattt 47654368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 1312185 - 1312271
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||| ||||| ||||| ||||  |||  ||||||||||||||||||| ||||||||||     | | ||||||||||||||||||||||    
T  1312185 ttatgaatatacacttttcattagtgagagtttataaattaaaataaaagtttatttattt-----acataagctatttttcataagctcaa 1312271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 34923008 - 34923065
Alignment:
Q  4 tgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| ||||||||||  ||| ||||| || ||| ||||||||||||||||||    
T  34923008 tgaagatacacttttcgttagtgagaacttatgaactaacataaaagcttatttattt 34923065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 1111349 - 1111381
Alignment:
Q  29 atcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||| |||||||||||    
T  1111349 atcttataaattaaaataaaaacttatttattt 1111381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12473425 - 12473485
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| |||| |||||||||||| |  ||| |||||||||||| ||| ||||||||||||||    
T  12473425 ttataaagaaacaattttcgtttgtgagaacttataaattaatatataagcttatttattt 12473485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25908366 - 25908426
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||| |  | |  ||||||||||| |||||| |||||||||||    
T  25908366 ttatgaagatacaattttcgtttgtgaaaagttataaattaacataaaaacttatttattt 25908426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 33288089 - 33288029
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||| ||||||||||  | | ||||| |||||| |||||| |||||||||||    
T  33288089 ttatgaagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttattt 33288029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 38372634 - 38372690
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||| ||||||||||||||  ||| ||||| |||||| ||||||||| ||||||||    
T  38372634 gaagaaacaattttcgttagtgagaacttatgaattaacataaaagctgatttattt 38372690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 39279505 - 39279588
Alignment:
Q  5 gaagatacaattttcgttagat-agatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    |||||||||||||||||||  | ||| | ||| |||||| ||||||||||||||||||      || ||||||||||||||||||||||    
T  39279505 gaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttatttg-----tataagctatttttcataagctcaa 39279588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47582578 - 47582530
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaa 49  Q
    |||||||||||||||||| ||||   ||| |||||||||||||||||||    
T  47582578 ttatgaagatacaatttttgttaatcagaacttataaattaaaataaaa 47582530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 8e-17; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5203448 - 5203388
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| ||| |||||| ||| |||||||||||||||||||||||||||||||    
T  5203448 ttatgaagatacaaattttgttagagagagcttataaattaaaataaaagcttatttattt 5203388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 16722098 - 16722202
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||||| ||||||||||  |||  ||||||||||| ||||||| | ||||||||     | | |||||||||||||||||||||| ||||| |    
T  16722098 ttatgaagatacacttttcgttagtgagagtttataaattaagataaaagttgatttattt-----acataagctatttttcataagctcaaaccaaacg 16722192  T
Q  101 ggaccttaaa 110  Q
    ||||||||||    
T  16722193 ggaccttaaa 16722202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 20458572 - 20458480
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||| |||||||||||||| |  ||| |||||| ||||||||||||||||||||||||     | | |||||||||||||||||||||| |||||    
T  20458572 ttatgaaaatacaattttcgttggtcagaacttatagattaaaataaaagcttatttattt-----acataagctatttttcataagctcaaaccaaa 20458480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 43268650 - 43268589
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatttt 62  Q
    |||||||||||||||||| |||||  ||| |||||||||||| |||||||||||||||||||    
T  43268650 ttatgaagatacaatttttgttagtgagaacttataaattaacataaaagcttatttatttt 43268589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26003069 - 26003129
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||| ||||||||||||||| |||||||||||    
T  26003069 ttatgaagatacaattttcgttagtgagagcttgtaaattaaaataaaaacttatttattt 26003129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 41419573 - 41419634
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatttt 62  Q
    ||||||||||||||||||||||||  ||| ||||| |||||| |||||| ||||||||||||    
T  41419573 ttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttatttt 41419634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11991376 - 11991436
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  |||  ||||||||||| ||||||||||||||||||    
T  11991376 ttatgaacatacaattttcgttagtgagagtttataaattaacataaaagcttatttattt 11991436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28357213 - 28357273
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   | | |||||||||||| ||||||||||||||||||    
T  28357213 ttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttattt 28357273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28625552 - 28625612
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| | ||| |||||| ||||||||||||||||||    
T  28625552 ttatgaagatacaattttcgttagtgagaacctatgaattaacataaaagcttatttattt 28625612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41059803 - 41059743
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| |||||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  41059803 ttatgaagattcaattttcgttagtgagaacttatgaattaacataaaagcttatttattt 41059743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 24030293 - 24030346
Alignment:
Q  8 gatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  24030293 gatacaattttcgttagtgagaacttatgaattaacataaaagcttatttattt 24030346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1943067 - 1943127
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  ||| ||||| |||||  ||||||||||||||||||    
T  1943067 ttatgaagatacaattttcattagtgagaacttatgaattagcataaaagcttatttattt 1943127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4728928 - 4728976
Alignment:
Q  13 aattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||  ||| |||||||||||||||||||||||||||||||    
T  4728928 aattttccttagtaagagcttataaattaaaataaaagcttatttattt 4728976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5559933 - 5559873
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  |||  |||| |||| | ||||||||||||||||||    
T  5559933 ttatgaagatacaattttcgttagtgagaatttatgaatttacataaaagcttatttattt 5559873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7364323 - 7364263
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||| || |||||  ||| ||||| |||||| ||||||||||||||||||    
T  7364323 ttatgaagatacaatatttgttagtgagaacttatgaattaatataaaagcttatttattt 7364263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 11912116 - 11912056
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| || |||||||||||||||    
T  11912116 ttatgaagatacaatttttgttagtgagaacttatgaattaacatgaaagcttatttattt 11912056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13060616 - 13060556
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| ||| |||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  13060616 ttatgaagttaccattttcgttagtgagaacttatgaattaacataaaagcttatttattt 13060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17657314 - 17657374
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||| |||||||||||  ||| ||||| |||||| ||||||| ||||||||||    
T  17657314 ttatgaagatacgattttcgttagtgagaacttatgaattaacataaaaggttatttattt 17657374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29418766 - 29418706
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| |||||||||||||||  |||  ||||||||||| |||||| |||||||||||    
T  29418766 ttatgaaggtacaattttcgttagtgagaatttataaattaagataaaaacttatttattt 29418706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 780574 - 780496
Alignment:
Q  9 atacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||| ||||  ||| |||||| |||||||||||||||||     | |||||||| ||||||||||||||||| ||||    
T  780574 atacaattttcattagtcagaacttatagattaaaataaaagctta-----tctatttatataagctatttttcataagttcaa 780496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 11163291 - 11163236
Alignment:
Q  6 aagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||   || ||||| |||||| ||||||||||||||||||    
T  11163291 aagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttattt 11163236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 15414064 - 15414123
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatt 60  Q
    ||||||| |||||||||| |||||  ||||||||| |||||| ||||||||||| |||||    
T  15414064 ttatgaatatacaatttttgttagtaagatcttatgaattaacataaaagcttaattatt 15414123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 7 - 98
Target Start/End: Complemental strand, 15709900 - 15709814
Alignment:
Q  7 agatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||| ||||  | | |||||||||||||||||||||| |     |||||||| | |||||||||||||||| ||||| |||||    
T  15709900 agatacaattttcattagtaaaagcttataaattaaaataaaagctca-----tttatttaaataagctatttttcataaactcaaaccaaa 15709814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38461296 - 38461234
Alignment:
Q  1 ttatgaagatacaattttcgttag--atagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| |||||| |||||  | ||| ||||||||||||||||||| |||||||||||    
T  38461296 ttatgaagatataatttttgttagtgagagaacttataaattaaaataaaaacttatttattt 38461234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 38498640 - 38498699
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatt 60  Q
    |||| |||||| |||||| |||||  | | ||||||||||||||||||||||||||||||    
T  38498640 ttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 102
Target Start/End: Complemental strand, 1371956 - 1371914
Alignment:
Q  60 tttatttatacaagctatttttcataagctcaatccaaatggg 102  Q
    ||||||| || ||| ||||||||||||||||||||||||||||    
T  1371956 tttatttgtataagttatttttcataagctcaatccaaatggg 1371914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 61
Target Start/End: Original strand, 17668480 - 17668510
Alignment:
Q  31 cttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||||||||||    
T  17668480 cttataaattaaaataaaagcttatttattt 17668510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 42852101 - 42852150
Alignment:
Q  9 atacaattttcgttagatagatcttataaattaaaataaaagcttattta 58  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||||||||    
T  42852101 atacaattttcgttagtgagaacttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 2878687 - 2878631
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| |||||  | | ||| |||||||| ||||||||||||||||||    
T  2878687 gaagatacaatttttgttagtgaaaacttttaaattaacataaaagcttatttattt 2878631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13625534 - 13625474
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| |||||| ||||||||||||  | | |||||||||||| ||||||| ||||||||||    
T  13625534 ttataaagataaaattttcgttagtgaaaacttataaattaatataaaagtttatttattt 13625474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27805987 - 27806047
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||||||||||||| |||||  | | |||||||||||| ||||||| ||||||||||    
T  27805987 ttataaagatacaatttttgttagtgaaaacttataaattaacataaaagtttatttattt 27806047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29136840 - 29136780
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||| |||| |  ||  ||||| |||||| ||||||||||||||||||    
T  29136840 ttatgaagatacaatttccgttggtgaggacttatgaattaacataaaagcttatttattt 29136780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35536917 - 35536976
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   ||| ||||| || ||| ||||||||||||||||||    
T  35536917 ttatgaagatacaattttcgttactgagaacttatgaa-taatataaaagcttatttattt 35536976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 8e-17; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29830653 - 29830593
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  29830653 ttatgaagatacaattttcgttagtgagaacttataaattaaaataaaaacttatttattt 29830593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 37778205 - 37778265
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| |||||||||||||||||||||||||||||||    
T  37778205 ttatgaagatacaatttttgttagtgagaacttataaattaaaataaaagcttatttattt 37778265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 17752145 - 17752059
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||     | | ||||||||||||||||||||||    
T  17752145 ttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttattt-----acataagctatttttcataagctcaa 17752059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 19053465 - 19053379
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| |||||||||||| ||||||| ||||||||||     | | ||||||||||||||||||||||    
T  19053465 ttatgaagatacaattttcgttagtaagaacttataaattaacataaaagtttatttattt-----acataagctatttttcataagctcaa 19053379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 29614265 - 29614351
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||     | | ||||||||||||||||||||||    
T  29614265 ttatgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttattt-----acataagctatttttcataagctcaa 29614351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 92
Target Start/End: Original strand, 3645376 - 3645460
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||     | | ||||||||||||||||||||||    
T  3645376 atgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttattt-----acataagctatttttcataagctcaa 3645460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 53218051 - 53217998
Alignment:
Q  4 tgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattt 57  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  53218051 tgaagatacaattttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 40240591 - 40240531
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  40240591 ttatgaagatacaattttcgttagtgagagcttatgaattaagataaaagcttatttattt 40240531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 20894576 - 20894634
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||    
T  20894576 atgaagatacaattttcgttagtgagagcttataaattaaaatataaacttatttattt 20894634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 38524160 - 38524253
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaat 99  Q
    ||||||| || |||||||||||||  ||||||||| |||||| |||||||||||     |||||||  | ||||| |||||||||||||||||||||||    
T  38524160 ttatgaatatgcaattttcgttagtaagatcttatgaattaacataaaagctta-----tttatttgcataagctctttttcataagctcaatccaaat 38524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1516112 - 1516052
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| |||||||||||||| ||||  ||| ||||||||||||||||||| |||||||||||    
T  1516112 ttataaagatacaattttcattagtgagaacttataaattaaaataaaaacttatttattt 1516052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20174954 - 20174894
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  ||||||||| |||||  ||||||||||||||||||    
T  20174954 ttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttattt 20174894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42381274 - 42381214
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||||||||||  ||| ||||||||||||||||||| |||| ||||||    
T  42381274 ttatgaagataaaattttcgttagtaagagcttataaattaaaataaaaacttaattattt 42381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42956193 - 42956133
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| |||||||||||||||||||  ||| |||||||||||| |||||| |||||||||||    
T  42956193 ttataaagatacaattttcgttagtgagaacttataaattaacataaaaacttatttattt 42956133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 48816787 - 48816847
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||||||||||| |  ||||||||||||||||  |||||||||||||||||    
T  48816787 ttatgaatatacaattttcgttggtaagatcttataaattaacttaaaagcttatttattt 48816847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 32901162 - 32901062
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||||||||| ||||||||||||  ||| ||||||  |||| |||||| | |||||||||   |     |||||||||||||||||||||||||||| |    
T  32901162 ttatgaagataaaattttcgttagtgagaacttatattttaatataaaaacatatttatttgcat-----aagctatttttcataagctcaatccaaacg 32901068  T
Q  101 ggacct 106  Q
    ||||||    
T  32901067 ggacct 32901062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22809207 - 22809147
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||   ||| ||||| |||||| |||||| |||||||||||    
T  22809207 ttatgaagatacaattttcgttaagaagaacttatgaattaacataaaaacttatttattt 22809147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42409988 - 42409928
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| |||| |||||||  ||| ||||||||||||||||||| |||| ||||||    
T  42409988 ttatgaagataaaattctcgttagtaagagcttataaattaaaataaaaacttaattattt 42409928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29830772 - 29830717
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatt 56  Q
    |||||||||||||||||| ||||   ||| ||||||||||||||||||| ||||||    
T  29830772 ttatgaagatacaatttttgttactgagaacttataaattaaaataaaaacttatt 29830717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 33946564 - 33946458
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaatg 100  Q
    ||||| ||||| |||||||||||   ||| ||||| |||||| ||||||||| ||||||||   |     |||||||||||||||||||||||||||| |    
T  33946564 ttatgtagataaaattttcgttaatgagaacttatgaattaatataaaagctcatttatttgcat-----aagctatttttcataagctcaatccaaacg 33946470  T
Q  101 ggaccttaaagt 112  Q
    || || ||||||    
T  33946469 gggccctaaagt 33946458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 40581089 - 40581030
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||| ||||||||||||||  ||| ||||| |||||| |||||| |||||||||||    
T  40581089 tatgaagaaacaattttcgttagtgagaacttatgaattaacataaaatcttatttattt 40581030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 32 - 61
Target Start/End: Original strand, 12004395 - 12004424
Alignment:
Q  32 ttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||||||||    
T  12004395 ttataaattaaaataaaagcttatttattt 12004424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43079948 - 43079864
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctc 90  Q
    ||||||||||||||||||||| |   ||| ||||| ||||||  ||||||||||||||||| |     | ||||||||||||||||||||    
T  43079948 ttatgaagatacaattttcgtgattgagaacttatgaattaacttaaaagcttatttatttga-----ataagctatttttcataagctc 43079864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 48597881 - 48597820
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatctta-taaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||| ||  ||| |||| | |||||| ||||||||||||||||||    
T  48597881 ttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttattt 48597820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 52895416 - 52895359
Alignment:
Q  4 tgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||| |||||||||||||||  |||  |||| |||||| ||||||||||||||||||    
T  52895416 tgaagttacaattttcgttagtgagaatttatgaattaacataaaagcttatttattt 52895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 585092 - 585152
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||| | || ||||  |||||| ||| ||||||||| ||||    
T  585092 ttatgaagatacaattttcgttagtttgaacttaagaattaacatataagcttattgattt 585152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 34707723 - 34707667
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||  ||| ||||  |||||| |||||| |||||||||||    
T  34707723 gaagatacaattttcgttagcgagaacttacgaattaacataaaaacttatttattt 34707667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45331309 - 45331249
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||| |||  ||| | ||| |||||| ||||||| ||||||||||    
T  45331309 ttatgaagatacaattttcgctagcaagaacatatgaattaacataaaagtttatttattt 45331249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 47403776 - 47403716
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||| |  ||  |||||||||||| ||||||  ||||||||||    
T  47403776 ttatgaagatacaattttcgtttgtgagggcttataaattaacataaaaatttatttattt 47403716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 446499 - 446559
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||    
T  446499 ttatgaagatacaattttcgttagtgagagcttataaattaaaataaaagcttacttattt 446559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10574175 - 10574115
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| |||||| ||  ||| |||||||||||||||||||||||||||||||    
T  10574175 ttatgaagatacaaatttcgtcagcgagagcttataaattaaaataaaagcttatttattt 10574115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22898371 - 22898285
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaa 92  Q
    ||||||| ||||||||||||||||  | | |||||| ||||||||||||||||||||||||     | | ||||||||||||||||||||||    
T  22898371 ttatgaaaatacaattttcgttagtcaaaacttatagattaaaataaaagcttatttattt-----acataagctatttttcataagctcaa 22898285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 32522058 - 32522000
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||||  ||| |||||||||||||||| || |||||||||||    
T  32522058 atgaagatacaattttcgttagtaagagcttataaattaaaatataaacttatttattt 32522000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 21788529 - 21788621
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||| ||||||||||||  ||| ||||| |||||| |||||||||||     |||||||  | ||| ||||||||||||||||||||||||    
T  21788529 ttatgaagataaaattttcgttagtgagagcttatgaattaatataaaagctta-----tttatttgcataagttatttttcataagctcaatccaaa 21788621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 30382279 - 30382223
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||||  | | |||||||||||||| ||||||||||||||||    
T  30382279 gaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttattt 30382223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 38216092 - 38216151
Alignment:
Q  2 tatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||||||  ||| ||||| | |||| ||||||||||||||||||    
T  38216092 tatgaagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttattt 38216151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 12238500 - 12238439
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttatttt 62  Q
    ||||||| ||||||||||||||||  ||||||||| |||||| ||||| ||||| |||||||    
T  12238500 ttatgaacatacaattttcgttagtaagatcttatgaattaacataaatgcttaattatttt 12238439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 42839335 - 42839278
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttattta 58  Q
    |||||||||| |||||||||||||| | | ||||| |||||| |||||||||||||||    
T  42839335 ttatgaagatgcaattttcgttagagaaaacttatcaattaacataaaagcttattta 42839278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 887484 - 887544
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||||| ||||  ||| ||||| |||||| |||||||||||| |||||    
T  887484 ttatgaagatacaattttcattagcaagaacttatgaattaacataaaagcttatctattt 887544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 4026997 - 4027057
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  ||| ||||| |||||| |||| |||||||||||||    
T  4026997 ttatgaagatacaatttttgttagtgagaacttatgaattaacataatagcttatttattt 4027057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 5516156 - 5516208
Alignment:
Q  9 atacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||  ||| |||||||||||| | ||||||||||||||||    
T  5516156 atacaattttcgttagtgagagcttataaattaacacaaaagcttatttattt 5516208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 12950129 - 12950069
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||| ||||||||||||  ||||||||| |||||| ||||||||||| ||||||    
T  12950129 ttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattattt 12950069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19683644 - 19683704
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| |||||  | | ||||||||||||||||||| ||||| |||||    
T  19683644 ttatgaagatacaatttttgttagtaaaaacttataaattaaaataaaaccttatctattt 19683704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23956278 - 23956218
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||| ||||||||||||||||||   ||| |||||||||||| |||||| |||||||||||    
T  23956278 ttataaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttattt 23956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29774817 - 29774877
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| ||||||||||||||||  ||| ||||| ||||||  |||||||||||||||||    
T  29774817 ttatgaaaatacaattttcgttagtgagaacttatgaattaacgtaaaagcttatttattt 29774877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 32366221 - 32366281
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||| |||||||||||  ||| |||||||| ||||| ||||||||||||||||    
T  32366221 ttatgaatatacgattttcgttagtaagagcttataaaataaaacaaaagcttatttattt 32366281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40301431 - 40301490
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||| ||||||||||  |||  |||||||||||||||||||| |||||||||    
T  40301431 ttatgaagatacacttttcgttagtgagagtttataaattaaaataaaagc-tatttattt 40301490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 42064923 - 42064983
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||  |||||||||||  ||| ||||| |||||| ||||||||||||||||||    
T  42064923 ttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttattt 42064983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 8832534 - 8832589
Alignment:
Q  6 aagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||  | | ||||| |||||| ||||||||||||||||||    
T  8832534 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 8832589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 11777056 - 11777148
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattttatttatacaagctatttttcataagctcaatccaaa 98  Q
    ||||||||||||| |||| |||||  ||| |||||||| ||| |||||| ||||     |||||||  | ||||||||||| ||||||||||||||||    
T  11777056 ttatgaagatacactttttgttagtgagaacttataaactaacataaaacctta-----tttatttgcagaagctatttttaataagctcaatccaaa 11777148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2401636 - 2401576
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| |||||||||| |||||  ||| |||||| ||||||||||||  ||||||||||    
T  2401636 ttatgaaaatacaatttttgttagtcagaacttatagattaaaataaaaatttatttattt 2401576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 2757100 - 2757040
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||| | ||| ||||||||||  ||| |||||||| |||||||||| |||||||||||    
T  2757100 ttatgaaaaaacagttttcgttagtgagagcttataaaataaaataaaaacttatttattt 2757040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 7480909 - 7480853
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||| ||||  ||| ||||| |||||| |||||| |||||||||||    
T  7480909 gaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttattt 7480853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 36501529 - 36501469
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||| ||||| ||||||  ||| || || |||||| ||||||||||||||||||    
T  36501529 ttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagcttatttattt 36501469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 38467 - 38407
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||| | |||||||||||  ||| |||||||||||||||||||||||||||||||    
T  38467 ttatgaagatgcgattttcgttagcgagagcttataaattaaaataaaagcttatttattt 38407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 40684 - 40628
Alignment:
Q  5 gaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||||   ||| ||||||||||||||||||| |||||||||||    
T  40684 gaagatacaattttcgttaaggagagcttataaattaaaataaaatcttatttattt 40628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 242654 - 242594
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||| |||||||||||  ||| ||||||||||||||||||| | |||||||||    
T  242654 ttatgaagatacgattttcgttagcgagagcttataaattaaaataaaaacctatttattt 242594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 227779 - 227832
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagctta 54  Q
    ||||||| ||||||||||||||||  ||||||||| |||||| |||||||||||    
T  227779 ttatgaatatacaattttcgttagtaagatcttatgaattaacataaaagctta 227832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 14752 - 14700
Alignment:
Q  9 atacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||  ||| |||||||||||| || |||||||||||||||    
T  14752 atacaattttcgttagtgagaacttataaattaacatgaaagcttatttattt 14700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19627 - 19687
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||||||| ||||   | ||||||||| ||||||||||| |||||||||||    
T  19627 ttatgaagatacaatttttgttaatgaaatcttataagttaaaataaaatcttatttattt 19687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1130 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Original strand, 2325 - 2383
Alignment:
Q  3 atgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    ||||||||||||||||| |||   |||  |||||||||||||||||| |||||||||||    
T  2325 atgaagatacaattttcattaaggagagtttataaattaaaataaaatcttatttattt 2383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 1130 - 1190
Alignment:
Q  1 ttatgaagatacaattttcgttagatagatcttataaattaaaataaaagcttatttattt 61  Q
    |||||||||||||| |||| ||||  ||| ||||||  |||| ||||||||||||||||||    
T  1130 ttatgaagatacaaatttcattagtgagaacttatactttaatataaaagcttatttattt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University