View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4161_high_5 (Length: 316)

Name: NF4161_high_5
Description: NF4161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4161_high_5
NF4161_high_5
[»] chr6 (10 HSPs)
chr6 (1-248)||(6921292-6921538)
chr6 (1-219)||(6935189-6935406)
chr6 (1-245)||(6954464-6954707)
chr6 (1-225)||(6947845-6948068)
chr6 (1-244)||(6942913-6943142)
chr6 (131-200)||(17369675-17369744)
chr6 (3-190)||(20770534-20770720)
chr6 (137-186)||(14749414-14749463)
chr6 (122-188)||(24254428-24254494)
chr6 (121-169)||(19746715-19746763)
[»] chr7 (52 HSPs)
chr7 (1-215)||(1985930-1986143)
chr7 (125-200)||(14076683-14076758)
chr7 (125-200)||(14386711-14386786)
chr7 (66-200)||(18514777-18514910)
chr7 (122-190)||(660847-660915)
chr7 (122-202)||(19344563-19344643)
chr7 (126-189)||(19604464-19604527)
chr7 (64-190)||(13416911-13417036)
chr7 (66-200)||(15571885-15572018)
chr7 (136-190)||(6864807-6864861)
chr7 (131-189)||(29881267-29881325)
chr7 (122-190)||(29454103-29454171)
chr7 (126-190)||(29874517-29874581)
chr7 (126-189)||(29867242-29867305)
chr7 (122-188)||(12819918-12819984)
chr7 (122-203)||(29921980-29922061)
chr7 (4-52)||(13417060-13417108)
chr7 (122-190)||(20352097-20352165)
chr7 (122-190)||(22063644-22063712)
chr7 (131-189)||(18952906-18952964)
chr7 (131-189)||(18982953-18983011)
chr7 (131-189)||(18997599-18997657)
chr7 (122-188)||(19351071-19351137)
chr7 (125-183)||(22021397-22021455)
chr7 (122-188)||(22028630-22028696)
chr7 (137-190)||(29859471-29859524)
chr7 (126-190)||(19637217-19637281)
chr7 (122-190)||(20058057-20058125)
chr7 (126-198)||(22070117-22070189)
chr7 (126-190)||(22100499-22100563)
chr7 (1-52)||(18514945-18514996)
chr7 (137-188)||(19357927-19357978)
chr7 (131-190)||(19645630-19645689)
chr7 (137-188)||(19722035-19722086)
chr7 (122-189)||(20338926-20338993)
chr7 (121-200)||(24002200-24002279)
chr7 (122-189)||(29106816-29106883)
chr7 (125-167)||(9807829-9807871)
chr7 (4-42)||(14076580-14076618)
chr7 (4-42)||(14386608-14386646)
chr7 (122-188)||(19325987-19326053)
chr7 (142-188)||(19374778-19374824)
chr7 (122-200)||(20374493-20374571)
chr7 (122-188)||(29899376-29899442)
chr7 (121-174)||(15443965-15444018)
chr7 (125-186)||(21218712-21218773)
chr7 (126-183)||(29445663-29445720)
chr7 (131-167)||(20133340-20133376)
chr7 (131-167)||(20140841-20140877)
chr7 (126-170)||(22080874-22080918)
chr7 (122-190)||(29431001-29431069)
chr7 (122-186)||(36263055-36263119)
[»] chr4 (14 HSPs)
chr4 (76-199)||(53774797-53774919)
chr4 (122-190)||(11970982-11971050)
chr4 (76-190)||(3565701-3565814)
chr4 (126-190)||(3557732-3557796)
chr4 (122-190)||(11981683-11981751)
chr4 (126-190)||(3560958-3561022)
chr4 (126-190)||(1686285-1686349)
chr4 (144-188)||(53790577-53790621)
chr4 (131-190)||(6113090-6113149)
chr4 (122-185)||(35767020-35767083)
chr4 (122-189)||(53430100-53430167)
chr4 (131-189)||(6392835-6392893)
chr4 (124-190)||(8443454-8443520)
chr4 (122-186)||(837778-837842)
[»] chr2 (8 HSPs)
chr2 (93-200)||(14514874-14514980)
chr2 (122-188)||(18908811-18908877)
chr2 (122-188)||(18913559-18913625)
chr2 (122-188)||(18920767-18920833)
chr2 (126-190)||(554482-554546)
chr2 (122-174)||(20975560-20975612)
chr2 (122-174)||(25698509-25698561)
chr2 (137-190)||(25377091-25377144)
[»] chr5 (6 HSPs)
chr5 (126-200)||(18964820-18964894)
chr5 (122-188)||(29597554-29597620)
chr5 (76-188)||(29647633-29647744)
chr5 (125-188)||(29642364-29642427)
chr5 (122-189)||(24330900-24330967)
chr5 (121-171)||(23086783-23086833)
[»] chr1 (9 HSPs)
chr1 (122-191)||(4570929-4570998)
chr1 (123-189)||(4014966-4015032)
chr1 (122-191)||(50645484-50645553)
chr1 (126-190)||(39379061-39379125)
chr1 (122-189)||(10218987-10219054)
chr1 (122-189)||(21855384-21855451)
chr1 (125-190)||(15961233-15961298)
chr1 (125-191)||(17560772-17560838)
chr1 (127-189)||(4016773-4016835)
[»] chr3 (3 HSPs)
chr3 (126-190)||(3625740-3625804)
chr3 (122-190)||(25901279-25901347)
chr3 (122-190)||(25915297-25915365)
[»] scaffold0354 (1 HSPs)
scaffold0354 (131-200)||(7474-7543)
[»] chr8 (6 HSPs)
chr8 (121-174)||(29390287-29390340)
chr8 (122-200)||(27618493-27618571)
chr8 (121-174)||(11338592-11338645)
chr8 (121-174)||(11339435-11339488)
chr8 (121-174)||(11345117-11345170)
chr8 (145-189)||(29157073-29157117)
[»] scaffold0867 (1 HSPs)
scaffold0867 (126-190)||(4669-4733)


Alignment Details
Target: chr6 (Bit Score: 228; Significance: 1e-126; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 6921538 - 6921292
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921538 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 6921439  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921438 atgattctaagaaaacccat-tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 6921340  T
Q  201 taaacgattttaaaactcaggagttatataatgattcattatttcatc 248  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  6921339 taaacaattttaaaactaaggagttatataatgattcattatttcatc 6921292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 6935406 - 6935189
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    |||| |||||||||| ||||||||||||||||||||||||||    
T  6935406 acagagacatgtacaaaattgttgctccctcgatgttgtgatgaagagctacatggctttcctactctttctggattgatggattgcctctatttttctt 6935307  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||| ||||||||||| | | |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||    
T  6935306 atgattttaagaaaacccat-tatgttatttggcaaatgaaggaatttggagttcaagaatcttggactaaattccttaaaattagttataccaatcttc 6935208  T
Q  201 taaacgattttaaaactca 219  Q
     | | ||||||||||||||    
T  6935207 aacaagattttaaaactca 6935189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 6954707 - 6954464
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||     || | |||||||||||||||||||||||||||||| ||| ||||    
T  6954707 acagagacatatacacagttgttgctcccccgatgttgtgatgaagagctaaccggtgctgcaactctttctgtattgatggattgcctctgtttatctt 6954608  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||||  || ||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||| |||||    
T  6954607 atgatttcaacaaaacccat-tttgttatttggcaaatgaaggaatttggagttgaagaatcttggactcaattgattaaaattagttttccgattcttc 6954509  T
Q  201 taaacgattttaaaactcaggagttatataatgattcattatttc 245  Q
    |||| |||||||||| |||||||||  |||| |||||||||||||    
T  6954508 taaaagattttaaaagtcaggagttcaataacgattcattatttc 6954464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6948068 - 6947845
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||      
T  6948068 acagagagatatacacggttgttgctccctcgatgttgtgatgaagagctacatgatgttccaactctttctgtgttgatggattgcctttgtttttcac 6947969  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||||  ||||||||||   |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  6947968 atgatttcaagaaaaccc-actttgttctttggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatgtgaatcttc 6947870  T
Q  201 taaacgattttaaaactcaggagtt 225  Q
     ||| ||| |||||| ||| |||||    
T  6947869 caaaagatattaaaattcatgagtt 6947845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 6943142 - 6942913
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || |||| ||             ||||||||||||||||||||||    
T  6943142 acagagacatatacaaaattgttgctccctcaatgttgtgatgaagagctacatgattttcctac-------------atggattgcctctatttttctt 6943056  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||| ||||||||||  | |||||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||||    
T  6943055 atgattttaagaaaacctat-tttgttatttagcaaatgaaggaatttggagttgaagaatcttagacgcaattccttaaaattagatatacaaatcttc 6942957  T
Q  201 taaacgattttaaaactcaggagttatataatgattcattattt 244  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  6942956 taaacgattttaaaattcaggagttctataatgattcattattt 6942913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 17369675 - 17369744
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 17369744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 20770534 - 20770720
Alignment:
Q  3 agagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttcttat 102  Q
    ||||||||| | ||| ||||| ||||||| |||||||||||||   | || | ||  || |||||||| ||| |||||||||||  | | ||||||| ||    
T  20770534 agagacatacaaacagttgttactccctcaatgttgtgatgaatttccacttgataatcaaactctttgtgtgttgatggattgtatttgtttttctcat 20770633  T
Q  103 gattctaagaaaacccttattt-gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||  ||| |||||  |||||| ||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||    
T  20770634 gatgttaaaaaaac--ttattttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaattccttaaaattagttat 20770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 14749414 - 14749463
Alignment:
Q  137 atgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 186  Q
    |||| ||||||||||||| |||| ||||||||||||||||| ||||||||    
T  14749414 atgatggaatttggagttcaagagtcttggactcaattcctcaaaattag 14749463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 24254494 - 24254428
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||||| |||  |||||||||||| ||| ||||||||||||||||| | ||||| ||||    
T  24254494 tttgttatatggcagatgtcggaatttggagtcgaacaatcttggactcaattcatcaaaatcagtt 24254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 19746763 - 19746715
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggact 169  Q
    ||||||||| |||||||||||| | ||||||||| |||| |||||||||    
T  19746763 atttgttatatggcaaatgaagaagtttggagttcaagagtcttggact 19746715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 131; Significance: 6e-68; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 1986143 - 1985930
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 100  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  1986143 acagagagatatacacagttgttgctccctcgatattgtgatgaagatctacatggtgttccaactctttctgtgttgatggattgcctctatttttctt 1986044  T
Q  101 atgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||||  |||||||||| | |||||| | |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| ||||||||    
T  1986043 atgatttcaagaaaacccat-tttgttctttggcaaatgaaggaatttggcgttgaagaatcttggactcaattgtttaaaattagttatatgaatcttc 1985945  T
Q  201 taaacgattttaaaa 215  Q
    || | ||| ||||||    
T  1985944 tagaagatattaaaa 1985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 14076683 - 14076758
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  14076683 gttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 14076758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 14386711 - 14386786
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  14386711 gttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 14386786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 18514910 - 18514777
Alignment:
Q  66 tctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttg 165  Q
    ||||||||| || ||||||||| | | ||||||||||||||  ||||||| || | ||  |||| ||| ||||| | ||||||||||||||| | |||||    
T  18514910 tctttctgttttaatggattgcatgtgtttttcttatgatttcaagaaaagccat-ttcattatatggaaaatggacgaatttggagttgaaaactcttg 18514812  T
Q  166 gactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||||||||||||||||||||||| ||||||||    
T  18514811 gactcaattccttaaaattagttatatgaatcttc 18514777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 660915 - 660847
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  660915 tttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttat 660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 202
Target Start/End: Complemental strand, 19344643 - 19344563
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttcta 202  Q
    |||||||| ||||| |||| |||||||||||||||| |||||||||||||||| ||||||||||||| |  ||||||||||    
T  19344643 tttgttatatggcagatgatggaatttggagttgaacaatcttggactcaatttcttaaaattagttttcagaatcttcta 19344563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 19604527 - 19604464
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  19604527 ttatatggcagatgaaggaatttggagttgaagactcctggactcaattccttaaaattagtta 19604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 64 - 190
Target Start/End: Complemental strand, 13417036 - 13416911
Alignment:
Q  64 actctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatct 163  Q
    ||||||||| | ||||  ||||| || | |||||||||||||| ||||||||||  | ||| | || ||||||||||||||||||||||||||||| |||    
T  13417036 actctttctatgttgaatgattgtctttgtttttcttatgattttaagaaaacctat-tttatcatatggcaaatgaaggaatttggagttgaagagtct 13416938  T
Q  164 tggactcaattccttaaaattagttat 190  Q
    |||  | ||||| ||||||||||||||    
T  13416937 tgggttgaattcgttaaaattagttat 13416911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 15572018 - 15571885
Alignment:
Q  66 tctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttg 165  Q
    ||||||||| || |||||||| || | ||||||||||||||  |||  ||||| | ||||| || |||||||||| ||| |||||||||||||| |||||    
T  15572018 tctttctgtgtttatggattgtctttgtttttcttatgatttcaagggaacccat-tttgtcatgtggcaaatgagggagtttggagttgaagagtcttg 15571920  T
Q  166 gactcaattccttaaaattagttatacgaatcttc 200  Q
    |  |||||||| ||||||||||||| | |||||||    
T  15571919 ggttcaattccataaaattagttattcaaatcttc 15571885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 190
Target Start/End: Complemental strand, 6864861 - 6864807
Alignment:
Q  136 aatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  6864861 aatgaaggaatttggagttgaagagtcttggactcagttccttaaaactagttat 6864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 29881267 - 29881325
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||    
T  29881267 tggcaaatgaagaaatttggggttgaagattcttggactcaattccttagaattagtta 29881325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 29454171 - 29454103
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||  |||| | |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  29454171 tttgttatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttat 29454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 29874517 - 29874581
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| ||| |||||||||||||||    
T  29874517 ttatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttat 29874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 29867242 - 29867305
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||| |||||||||||| |||| || |||||||| ||||||||||||||||||| |||||||||    
T  29867242 ttatatggcaaatgaagaaattcggggttgaagattcttggactcaattccttagaattagtta 29867305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 12819984 - 12819918
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||| | ||||| |||| |||||||||||||||| |||| |||||||||||||||||||| ||||    
T  12819984 tttgttgtatggcagatgacggaatttggagttgaacaatcctggactcaattccttaaaatcagtt 12819918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 203
Target Start/End: Complemental strand, 29922061 - 29921980
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttctaa 203  Q
    |||||||| ||||| |||||| ||||||| | |||||| |||||| |||||||||||| ||||||||||   ||||||||||    
T  29922061 tttgttatatggcagatgaagaaatttggggatgaagattcttggtctcaattccttagaattagttatcaaaatcttctaa 29921980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 13417108 - 13417060
Alignment:
Q  4 gagacatatacacaattgttgctccctcgatgttgtgatgaagagctac 52  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  13417108 gagacatatacacagttgttgctacctcgatgttgtgaggaagagctac 13417060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 20352097 - 20352165
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    ||||| || ||| ||||||||||||||||||||||||| || ||||||||| |  ||||||||||||||    
T  20352097 tttgtaatatgggaaatgaaggaatttggagttgaagattcatggactcaactttttaaaattagttat 20352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 190
Target Start/End: Original strand, 22063644 - 22063712
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||||||||||||||||||| || |||| ||||||||||| ||  | ||||||||||||    
T  22063644 tttgttatatggcaaatgaaggaatttggatttcaagagtcttggactcagttattcaaaattagttat 22063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 18952964 - 18952906
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18952964 tggcagatgaaggaatttggagttgacaagtcatggactcagttccttaaaattagtta 18952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 18983011 - 18982953
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18983011 tggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18982953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 18997657 - 18997599
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18997657 tggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18997599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 19351137 - 19351071
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||| | ||||| |||| ||||||||||||||| || |||||||||| |||||| ||||||||||    
T  19351137 tttgttttatggcagatgatggaatttggagttgaggagtcttggactccattcctcaaaattagtt 19351071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 22021397 - 22021455
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 183  Q
    ||||| ||||| |||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  22021397 gttatatggcagatgatggattatggagttgaagaatcttggactcaattacttaaaat 22021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 22028630 - 22028696
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||| |||||| ||| | |||||||||||| |||||||||||||| ||||| |||||||    
T  22028630 tttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaagattagtt 22028696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 29859471 - 29859524
Alignment:
Q  137 atgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||| |||||||||||||||| |||||||| | ||| |||||||||||||||    
T  29859471 atgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttat 29859524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 19637281 - 19637217
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| |||||||||||||||||||||||| |||| || |||| ||   |||||||||||||||||    
T  19637281 ttatatggcaaatgaaggaatttggagttcaagagtcgtggattcggctccttaaaattagttat 19637217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 20058125 - 20058057
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||| ||||| |||||||  |||||||||| ||||||  |||||| |||||||||||||||    
T  20058125 tttgttatatggaaaatggaggaattcagagttgaagagtcttggtgtcaatttcttaaaattagttat 20058057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 198
Target Start/End: Original strand, 22070117 - 22070189
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatct 198  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||  ||  | ||||||||||||| ||||||    
T  22070117 ttatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaattagttataagaatct 22070189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 22100499 - 22100563
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||| ||  | ||||||||||||    
T  22100499 ttatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 22100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18514996 - 18514945
Alignment:
Q  1 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctac 52  Q
    ||||||||||||||||| || ||||||||||||| |||| || |||||||||    
T  18514996 acagagacatatacacagttcttgctccctcgatcttgtaataaagagctac 18514945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 19357927 - 19357978
Alignment:
Q  137 atgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||| ||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  19357927 atgatggaatttggagttcaagagtcttggactcaattcttaaaaattagtt 19357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 19645689 - 19645630
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    ||||| ||||||||||||||| ||||||| || |||||||  || |||||||||||||||    
T  19645689 tggcagatgaaggaatttggaattgaagagtcatggactctgttacttaaaattagttat 19645630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 19722035 - 19722086
Alignment:
Q  137 atgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||| ||||||||||||| |||| ||||||||||||||||| ||||| ||||    
T  19722035 atgatggaatttggagttcaagattcttggactcaattcctcaaaatcagtt 19722086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 20338926 - 20338993
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||| || ||| ||||||||||||| ||||||||||| |||||||||||| || || |||| |||||    
T  20338926 tttgtaatatggaaaatgaaggaattaggagttgaagattcttggactcaactctttcaaatcagtta 20338993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 121 - 200
Target Start/End: Original strand, 24002200 - 24002279
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||||| | ||||| |||||||| |  |||||| |||| |||||||||||||| ||||| |||||||||  ||||||||    
T  24002200 atttgttttatggcatatgaaggagtacggagttcaagagtcttggactcaattacttaagattagttatcagaatcttc 24002279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 29106816 - 29106883
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||| | ||||| |||||| ||||||| |||||||| |||||||||||| |  |||||||||||||    
T  29106816 tttgttgtatggcagatgaagaaatttggggttgaagagtcttggactcaactttttaaaattagtta 29106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 9807829 - 9807871
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttgga 167  Q
    ||||| ||||| ||||||||||||||||||||||| |||||||    
T  9807829 gttatatggcagatgaaggaatttggagttgaagagtcttgga 9807871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 14076580 - 14076618
Alignment:
Q  4 gagacatatacacaattgttgctccctcgatgttgtgat 42  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  14076580 gagacatatacacaattgttactccctccatgttgtgat 14076618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 14386608 - 14386646
Alignment:
Q  4 gagacatatacacaattgttgctccctcgatgttgtgat 42  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  14386608 gagacatatacacaattgttactccctccatgttgtgat 14386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 19326053 - 19325987
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||||| |||  |||||||||||| ||| ||||||||||||||||| | ||||| ||||    
T  19326053 tttgttatatggcatatgtcggaatttggagtagaacaatcttggactcaattcatcaaaatcagtt 19325987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 19374778 - 19374824
Alignment:
Q  142 ggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||    
T  19374778 ggaatttggagttgaacggtcttggactcaatttcttaaaattagtt 19374824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 20374571 - 20374493
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    ||||| || ||| ||||||||||||||||||||| ||| || |||| |||| |  |||||||||||||||  |||||||    
T  20374571 tttgtaatatgggaaatgaaggaatttggagttggagattcatggattcaactttttaaaattagttataataatcttc 20374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 29899376 - 29899442
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||||| |||||| ||||||| |||||||| || |||||||||||  | ||||||||||    
T  29899376 tttgttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaattagtt 29899442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 15443965 - 15444018
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    ||||||| | ||||| |||||||| | |||||||||||| ||||||||||||||    
T  15443965 atttgttttatggcatatgaaggagtatggagttgaagagtcttggactcaatt 15444018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 21218773 - 21218712
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 186  Q
    ||||| |||||||||| ||||||||||| |||  | ||||||||||||||||| ||| ||||    
T  21218773 gttatatggcaaatgacggaatttggagatgataagtcttggactcaattcctcaaatttag 21218712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 29445720 - 29445663
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 183  Q
    |||| ||||| ||||||||||| || |||||||| |||||||||||||| || |||||    
T  29445720 ttatatggcagatgaaggaattaggggttgaagactcttggactcaatttctaaaaat 29445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 20133376 - 20133340
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttgga 167  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  20133376 tggcaaatgaaagaatttggagttgaagattcttgga 20133340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 20140877 - 20140841
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttgga 167  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20140877 tggcaaatgaaggaatttggagttgaaaattcttgga 20140841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 22080874 - 22080918
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactc 170  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||    
T  22080874 ttatatggcaaatgaagcaatttggagttcaagagtcttggactc 22080918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 29431069 - 29431001
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||  |||| | ||||||| | | |||| |||||||| |||||||||||||||||||||    
T  29431069 tttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattccttaaaattagttat 29431001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 36263055 - 36263119
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 186  Q
    |||||||| ||| | ||| | ||||||||||||||||| |||||||||||| || ||||| ||||    
T  36263055 tttgttatatggaagatggaagaatttggagttgaagagtcttggactcaactcattaaagttag 36263119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 6e-28; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 53774797 - 53774919
Alignment:
Q  76 ttgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattc 175  Q
    |||||||||||  | | |||||||||||||| |||  |||| | | |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  53774797 ttgatggattgtatttgtttttcttatgattttaaagaaactcat-tttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattc 53774895  T
Q  176 cttaaaattagttatacgaatctt 199  Q
    |||||||||||||||  |||||||    
T  53774896 cttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 11971050 - 11970982
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  11971050 tttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttat 11970982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 3565701 - 3565814
Alignment:
Q  76 ttgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattc 175  Q
    |||| ||| ||||| | ||||||||||  || ||||||||||  | ||| |||| ||||| |||||||||||||| |||||||| ||||||||||||||     
T  3565701 ttgagggactgcctttgtttttcttattgttataagaaaaccgat-tttattatatggcagatgaaggaatttggggttgaagagtcttggactcaattt 3565799  T
Q  176 cttaaaattagttat 190  Q
    |||||||||||||||    
T  3565800 cttaaaattagttat 3565814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 3557732 - 3557796
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  3557732 ttatatggcatatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttat 3557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 11981751 - 11981683
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||||||||||||||||||||| ||||| || ||||||| ||| |||||||||||||||    
T  11981751 tttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaaattagttat 11981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 3561022 - 3560958
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||| |||||  ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  3561022 ttatttggcagatgaaaaaatttggggttgaagagtcttggactcaatttcttaaaattagttat 3560958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 1686349 - 1686285
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||| |||||||||||||| ||||| || |||||||||||||| ||||||  |||||||    
T  1686349 ttatatggcagatgaaggaatttggcgttgacgagtcttggactcaatttcttaaatatagttat 1686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 53790577 - 53790621
Alignment:
Q  144 aatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||    
T  53790577 aatttggatttgaacaatcttggactcaatttcttaaaattagtt 53790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 6113090 - 6113149
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||| ||||||||||||| |||| ||||||||||| ||||||  ||||||||||    
T  6113090 tggcgaatgatggaatttggagttaaagagtcttggactcagttccttcgaattagttat 6113149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 185
Target Start/End: Original strand, 35767020 - 35767083
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaatta 185  Q
    |||||||| ||| | ||| | ||||||||||||||||| ||||||| |||| ||||||||||||    
T  35767020 tttgttatatggaagatggaagaatttggagttgaagagtcttggattcaactccttaaaatta 35767083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 53430167 - 53430100
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||| || ||||| |||||| ||| ||| |  ||||| |||||||||||||||||||||||||||||    
T  53430167 tttgtcatatggcagatgaagaaatatggggccgaagattcttggactcaattccttaaaattagtta 53430100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 6392835 - 6392893
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||||||||||| ||||||||| | || ||||||| ||||||  |||||||||||||    
T  6392835 tggcaaatgaaggattttggagttcacgagtcttggattcaattatttaaaattagtta 6392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 8443520 - 8443454
Alignment:
Q  124 tgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||| ||||| |||||||| ||||||||| | || ||||||| ||||||  ||||||||||||||    
T  8443520 tgttatttggcagatgaaggattttggagttcacgagtcttggattcaattatttaaaattagttat 8443454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 186
Target Start/End: Original strand, 837778 - 837842
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 186  Q
    |||||||| |||||||||||| | ||||| ||| |||| ||||||| ||||||  ||||||||||    
T  837778 tttgttatatggcaaatgaagaattttggtgttcaagagtcttggattcaattatttaaaattag 837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 200
Target Start/End: Original strand, 14514874 - 14514980
Alignment:
Q  93 tttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatac 192  Q
    ||||||||||||||  |||||||||| | || ||||| ||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||     
T  14514874 tttttcttatgatttcaagaaaacccatctt-gttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaaaattagttatat 14514972  T
Q  193 gaatcttc 200  Q
    ||||||||    
T  14514973 gaatcttc 14514980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 18908877 - 18908811
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18908877 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18908811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 18913625 - 18913559
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18913625 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 18920833 - 18920767
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18920833 tttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18920767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 554482 - 554546
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||||||||  |||| ||||||| |||| |||||||||||||| |||||||||||||||    
T  554482 ttatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaattagttat 554546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 20975560 - 20975612
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    |||||||| |||||||||| |||||||||||||||||| ||||||| ||||||    
T  20975560 tttgttatatggcaaatgagggaatttggagttgaagattcttggattcaatt 20975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 25698509 - 25698561
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    |||||||| ||||||||||  ||||||||||||||||| ||||||||| ||||    
T  25698509 tttgttatatggcaaatgagagaatttggagttgaagactcttggactaaatt 25698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 25377091 - 25377144
Alignment:
Q  137 atgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||||||||| |||| ||||||| ||||||  ||||||||||||||    
T  25377091 atgaaggattttggagttcaagagtcttggattcaattatttaaaattagttat 25377144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 18964894 - 18964820
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||  ||||||||    
T  18964894 ttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaatttgttatcagaatcttc 18964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 122 - 188
Target Start/End: Complemental strand, 29597620 - 29597554
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    |||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29597620 tttgttatatggcaaatgattgaatttggagttgaacaatcttggactcaattccttaaaattagtt 29597554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 188
Target Start/End: Original strand, 29647633 - 29647744
Alignment:
Q  76 ttgatggattgcctctatttttcttatgattctaagaaaacccttatttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattc 175  Q
    |||||||||||||| | ||||||| |  ||  ||||||||| | | |||||||| ||||||||||  ||||||||| ||||| |||||||||||||||||    
T  29647633 ttgatggattgcctttgtttttctcaccatcttaagaaaactcat-tttgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattc 29647731  T
Q  176 cttaaaattagtt 188  Q
    |||||||||||||    
T  29647732 cttaaaattagtt 29647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 29642364 - 29642427
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 188  Q
    ||||| ||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29642364 gttatatggcaaatgatagaatttggatttgaacaatcttggactcaattccttaaaattagtt 29642427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 24330967 - 24330900
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||||| ||| | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  24330967 tttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 24330900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 23086783 - 23086833
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactca 171  Q
    ||||||||| ||||| |||||||| ||||||||| |||| |||||||||||    
T  23086783 atttgttatatggcagatgaaggagtttggagttcaagagtcttggactca 23086833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 4570929 - 4570998
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 191  Q
    |||||||| |||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  4570929 tttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 4570998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 4015032 - 4014966
Alignment:
Q  123 ttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||| |||||||    
T  4015032 ttgttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagtta 4014966  T

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Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 191
Target Start/End: Complemental strand, 50645553 - 50645484
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 191  Q
    |||||||| |||||||||||||| ||||||||| |||| ||||||| ||||||  |||||||||||||||    
T  50645553 tttgttatgtggcaaatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttata 50645484  T

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Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 39379125 - 39379061
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| ||||| |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||    
T  39379125 ttatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaatcagttat 39379061  T

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Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 10218987 - 10219054
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||| | |||||||||||| |||||||  ||||||| |||||||||||||| ||||||||||||||    
T  10218987 tttgttgtatggcaaatgaagaaatttgggattgaagattcttggactcaattacttaaaattagtta 10219054  T

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Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 21855451 - 21855384
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||||| ||| | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  21855451 tttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 21855384  T

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Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 15961233 - 15961298
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||||| ||||| ||| ||||    
T  15961233 gttatatggaaaatgaagaaatttggagctgaagaatcttggactcaattctttaaagttaattat 15961298  T

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Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 191
Target Start/End: Complemental strand, 17560838 - 17560772
Alignment:
Q  125 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 191  Q
    ||||| ||||| |||||| ||||||| |||||||| |||||||| | |||||||| |||||||||||    
T  17560838 gttatatggcacatgaagaaatttggggttgaagattcttggacaccattccttataattagttata 17560772  T

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Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 4016835 - 4016773
Alignment:
Q  127 tatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    ||||||||| |||||| |||||||||||||||| || |||||||| ||  ||||| |||||||    
T  4016835 tatctggcagatgaagaaatttggagttgaagattcctggactcagttgtttaaatttagtta 4016773  T

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Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 3625740 - 3625804
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  3625740 ttatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttat 3625804  T

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Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 25901347 - 25901279
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||| |||||||||| ||| ||||| |||| ||||||| ||||||  | ||||||||||||    
T  25901347 tttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25901279  T

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Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 25915365 - 25915297
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||||||| ||| |||||||||| ||| ||||| |||| ||||||| ||||||  | ||||||||||||    
T  25915365 tttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25915297  T

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Target: scaffold0354 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 7474 - 7543
Alignment:
Q  131 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||||||| |||  ||||||||    
T  7474 tggcaaatgaaggaatttggagttgatgagtcttgggttcaattccttaaaattagctatcggaatcttc 7543  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 29390287 - 29390340
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    ||||||||| ||||| |||| |||||||||||||||||||||||| ||| ||||    
T  29390287 atttgttatatggcagatgagggaatttggagttgaagaatcttgaactaaatt 29390340  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 200
Target Start/End: Original strand, 27618493 - 27618571
Alignment:
Q  122 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 200  Q
    |||||||| ||| ||||| | ||| | ||||||||||| ||||||||||| || |||||| ||||||||  ||||||||    
T  27618493 tttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagttagttatcagaatcttc 27618571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 11338645 - 11338592
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    ||||||||| ||||||||||| || |||||| || ||||||||||| |||||||    
T  11338645 atttgttatatggcaaatgaaagagtttggatttcaagaatcttggtctcaatt 11338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 11339488 - 11339435
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    ||||||||| ||||||||||  || |||||| || |||||||||||||||||||    
T  11339488 atttgttatatggcaaatgagcgagtttggatttcaagaatcttggactcaatt 11339435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 11345170 - 11345117
Alignment:
Q  121 atttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 174  Q
    ||||||||| ||||||||| | || |||||| || |||||||||||||||||||    
T  11345170 atttgttatatggcaaatggaagagtttggatttcaagaatcttggactcaatt 11345117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 29157073 - 29157117
Alignment:
Q  145 atttggagttgaagaatcttggactcaattccttaaaattagtta 189  Q
    |||||||||||||||  | ||||||||| ||||||||||||||||    
T  29157073 atttggagttgaagagccatggactcaactccttaaaattagtta 29157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Complemental strand, 4733 - 4669
Alignment:
Q  126 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 190  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||||| ||  | ||||||||||||    
T  4733 ttatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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