View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4161_low_1 (Length: 672)

Name: NF4161_low_1
Description: NF4161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4161_low_1
NF4161_low_1
[»] chr6 (14 HSPs)
chr6 (19-657)||(6920902-6921538)
chr6 (19-576)||(6954147-6954707)
chr6 (19-577)||(6942589-6943142)
chr6 (19-495)||(6934945-6935406)
chr6 (19-327)||(6947760-6948068)
chr6 (299-543)||(6947493-6947740)
chr6 (340-494)||(20770823-20770982)
chr6 (21-207)||(20770534-20770720)
chr6 (148-217)||(17369675-17369744)
chr6 (333-478)||(17369851-17369996)
chr6 (133-203)||(14749393-14749463)
chr6 (127-205)||(24254428-24254506)
chr6 (539-579)||(17370022-17370062)
chr6 (137-201)||(24950150-24950214)
[»] chr7 (67 HSPs)
chr7 (19-543)||(1985617-1986143)
chr7 (284-473)||(15571632-15571821)
chr7 (84-217)||(18514777-18514910)
chr7 (335-494)||(14076842-14077001)
chr7 (335-494)||(14386870-14387029)
chr7 (284-461)||(13416657-13416834)
chr7 (82-207)||(13416911-13417036)
chr7 (136-217)||(14076677-14076758)
chr7 (136-217)||(14386705-14386786)
chr7 (84-217)||(15571885-15572018)
chr7 (89-219)||(19344563-19344693)
chr7 (138-207)||(660847-660916)
chr7 (111-206)||(19604464-19604559)
chr7 (127-200)||(22021382-22021455)
chr7 (99-207)||(6864807-6864914)
chr7 (122-206)||(29867221-29867305)
chr7 (131-205)||(22028622-22028696)
chr7 (137-207)||(29454103-29454173)
chr7 (148-206)||(29881267-29881325)
chr7 (137-205)||(12819918-12819986)
chr7 (133-205)||(19351071-19351143)
chr7 (111-207)||(20058057-20058153)
chr7 (131-207)||(20352089-20352165)
chr7 (131-207)||(22063636-22063712)
chr7 (111-207)||(22100467-22100563)
chr7 (143-207)||(29874517-29874581)
chr7 (137-220)||(29921980-29922063)
chr7 (127-184)||(9807814-9807871)
chr7 (412-556)||(18514468-18514618)
chr7 (133-206)||(18952906-18952979)
chr7 (133-206)||(18982953-18983026)
chr7 (133-206)||(18997599-18997672)
chr7 (22-70)||(13417060-13417108)
chr7 (130-206)||(20338917-20338993)
chr7 (136-215)||(22070110-22070189)
chr7 (112-203)||(36263028-36263119)
chr7 (127-205)||(19325987-19326065)
chr7 (137-207)||(19637217-19637287)
chr7 (131-217)||(20374493-20374579)
chr7 (137-207)||(29859454-29859524)
chr7 (137-206)||(29106814-29106883)
chr7 (122-207)||(29431001-29431086)
chr7 (131-200)||(29445663-29445732)
chr7 (95-191)||(15443922-15444018)
chr7 (133-205)||(19357906-19357978)
chr7 (137-205)||(19722018-19722086)
chr7 (421-493)||(22064356-22064428)
chr7 (131-187)||(22080862-22080918)
chr7 (137-205)||(29899374-29899442)
chr7 (19-70)||(18514945-18514996)
chr7 (421-488)||(19350803-19350870)
chr7 (148-207)||(19645630-19645689)
chr7 (112-203)||(36260228-36260319)
chr7 (129-203)||(13888098-13888172)
chr7 (22-60)||(14076580-14076618)
chr7 (22-60)||(14386608-14386646)
chr7 (159-205)||(19374778-19374824)
chr7 (411-485)||(19597401-19597475)
chr7 (137-203)||(21218712-21218778)
chr7 (421-459)||(22524940-22524978)
chr7 (139-217)||(24002201-24002279)
chr7 (94-191)||(26256732-26256829)
chr7 (95-191)||(15508704-15508800)
chr7 (590-634)||(15571409-15571453)
chr7 (421-493)||(18982666-18982738)
chr7 (148-184)||(20133340-20133376)
chr7 (148-184)||(20140841-20140877)
[»] scaffold0354 (2 HSPs)
scaffold0354 (284-569)||(7607-7887)
scaffold0354 (148-217)||(7474-7543)
[»] chr4 (23 HSPs)
chr4 (94-216)||(53774797-53774919)
chr4 (94-207)||(3565701-3565814)
chr4 (131-207)||(11970982-11971058)
chr4 (131-207)||(3557720-3557796)
chr4 (131-207)||(11981683-11981759)
chr4 (99-207)||(3560958-3561066)
chr4 (94-207)||(8443454-8443567)
chr4 (421-494)||(53775101-53775174)
chr4 (130-203)||(837769-837842)
chr4 (136-202)||(35767017-35767083)
chr4 (131-208)||(6372439-6372516)
chr4 (137-206)||(53430100-53430169)
chr4 (143-207)||(1686285-1686349)
chr4 (131-206)||(6392815-6392893)
chr4 (161-205)||(53790577-53790621)
chr4 (148-207)||(6113090-6113149)
chr4 (94-169)||(10475164-10475239)
chr4 (421-459)||(2911335-2911373)
chr4 (421-491)||(11970722-11970792)
chr4 (94-167)||(10464226-10464299)
chr4 (517-578)||(53775166-53775226)
chr4 (137-213)||(10468042-10468118)
chr4 (424-492)||(11981422-11981490)
[»] chr2 (12 HSPs)
chr2 (111-217)||(14514874-14514980)
chr2 (131-205)||(18908811-18908885)
chr2 (131-205)||(18920767-18920841)
chr2 (132-205)||(18913559-18913632)
chr2 (340-486)||(14515067-14515217)
chr2 (421-481)||(18908517-18908577)
chr2 (132-207)||(554471-554546)
chr2 (136-191)||(20975557-20975612)
chr2 (421-481)||(18913265-18913325)
chr2 (137-191)||(25698507-25698561)
chr2 (135-207)||(25377072-25377144)
chr2 (421-488)||(20712266-20712331)
[»] chr5 (8 HSPs)
chr5 (94-205)||(29647633-29647744)
chr5 (85-217)||(18964820-18964952)
chr5 (131-205)||(29597554-29597628)
chr5 (126-205)||(29642348-29642427)
chr5 (323-482)||(18964561-18964720)
chr5 (131-206)||(24330900-24330975)
chr5 (139-188)||(23086784-23086833)
chr5 (132-200)||(28763912-28763980)
[»] chr1 (9 HSPs)
chr1 (137-208)||(4570927-4570998)
chr1 (136-208)||(50645484-50645556)
chr1 (131-206)||(21855384-21855459)
chr1 (140-206)||(4014966-4015032)
chr1 (137-207)||(39379061-39379131)
chr1 (137-206)||(10218985-10219054)
chr1 (142-207)||(15961233-15961298)
chr1 (137-208)||(17560772-17560843)
chr1 (144-206)||(4016773-4016835)
[»] chr3 (4 HSPs)
chr3 (143-207)||(3625740-3625804)
chr3 (135-207)||(25901279-25901351)
chr3 (135-207)||(25915297-25915369)
chr3 (132-188)||(3837904-3837960)
[»] scaffold0867 (1 HSPs)
scaffold0867 (111-207)||(4669-4765)
[»] chr8 (8 HSPs)
chr8 (119-217)||(27618473-27618571)
chr8 (139-191)||(29390288-29390340)
chr8 (131-171)||(42846461-42846501)
chr8 (139-191)||(11338592-11338644)
chr8 (139-191)||(11339435-11339487)
chr8 (139-191)||(11345117-11345169)
chr8 (421-485)||(27618727-27618791)
chr8 (162-206)||(29157073-29157117)
[»] scaffold0242 (2 HSPs)
scaffold0242 (131-200)||(13737-13806)
scaffold0242 (131-200)||(22572-22641)
[»] scaffold0267 (1 HSPs)
scaffold0267 (132-188)||(13385-13441)
[»] scaffold0097 (1 HSPs)
scaffold0097 (421-488)||(16105-16170)


Alignment Details
Target: chr6 (Bit Score: 604; Significance: 0; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 604; E-Value: 0
Query Start/End: Original strand, 19 - 657
Target Start/End: Complemental strand, 6921538 - 6920902
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921538 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 6921439  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921438 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 6921339  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6921338 aaacaattttaaaactaaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttccgagaatggtgatacattgatattt 6921239  T
Q  319 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagg 418  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  6921238 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaattttgtggttcactgccaagg 6921139  T
Q  419 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatggtacaatgtattt 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6921138 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatggtacaatgtattt 6921039  T
Q  519 tgtgataatttcatatcatggttttgatttgattatattgttgaatgattatctgttttattaactgtgaattttctcaattttatttactgttctaatt 618  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6921038 tgtgataatt--atatcatggttttgatttgattatattgttgaatgattatctgttttattaactgtgaattttctcgattttatttactgttctaatt 6920941  T
Q  619 ttgagtttttatgtgtccattgatagaatgcaccctttg 657  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6920940 ttgagtttttatgtgtccattgatagaatgcaccctttg 6920902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 19 - 576
Target Start/End: Complemental strand, 6954707 - 6954147
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||     || | |||||||||||||||||||||||||||||| ||| ||||    
T  6954707 acagagacatatacacagttgttgctcccccgatgttgtgatgaagagctaaccggtgctgcaactctttctgtattgatggattgcctctgtttatctt 6954608  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    ||||||  || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| | ||| ||||||    
T  6954607 atgatttcaacaaaacccattttgttatttggcaaatgaaggaatttggagttgaagaatcttggactcaattgattaaaattagttttccgattcttct 6954508  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    ||| |||||||||| |||||||||  |||| ||||||||||||| | |  |||||||||  ||| ||||||||||| || ||||||||||||||||||||    
T  6954507 aaaagattttaaaagtcaggagttcaataacgattcattatttctttgtcctcgattgatgccactgtgtttttctaaggatggtgatacattgatattt 6954408  T
Q  319 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagg 418  Q
    || |||||| ||| |||||| ||||||||||||||||  ||| |||||||||||| || |||| |||||||||||||||||||||||||| |||||||||    
T  6954407 gcaatcaatttactagaccaagcaattctctataatttaaaaaataatagagcaacgagaattaaaagtaccaataaaatttggtggtccgctgccaagg 6954308  T
Q  419 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgtt-cgatgatttacttgtttgaatttgtgttagcttgtgtatggtacaatgtatt 517  Q
    ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6954307 gatatgttgaaagcttggtatcgacttcttgaaagtatgttttttttccgatgatttacttgtttgaatttgtgttagcttgtctatggtacaatgtatt 6954208  T
Q  518 ttgtga-taatttcatatcatggttttgatttgattatattg-ttgaatgattatctgttt 576  Q
    |||||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  6954207 ttgtgattattttcataccatggttttgatttgattatattgtttgaatgattatctgttt 6954147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 19 - 577
Target Start/End: Complemental strand, 6943142 - 6942589
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || |||| ||             ||||||||||||||||||||||    
T  6943142 acagagacatatacaaaattgttgctccctcaatgttgtgatgaagagctacatgattttcctac-------------atggattgcctctatttttctt 6943056  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    |||||| |||||||||| |||||||||| | |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||    
T  6943055 atgattttaagaaaacctattttgttatttagcaaatgaaggaatttggagttgaagaatcttagacgcaattccttaaaattagatatacaaatcttct 6942956  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||   | ||||||  ||| |||||||||||||||||||||||||||||||||||    
T  6942955 aaacgattttaaaattcaggagttctataatgattcattattttatcgtcttggattgaggccattgtgtttttctgagaatggtgatacattgatattt 6942856  T
Q  319 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagg 418  Q
    || |||||| ||| |||||| |||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  6942855 gcaatcaatttactagaccaagcaattctctataatttgaaagataatagagcaaagagaattaaaagtaccaataaaatttggtggtccactgccaagg 6942756  T
Q  419 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttactt-------gtttgaatttgtgttagcttgtgtatggtacaa 511  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| | |        ||||||||||||||||||||||||||||| ||    
T  6942755 gatatgttgaaagcttggtatcaacttcttgaaagtaagtttttgtttgattatttccatatcatggttttgaatttgtgttagcttgtgtatggtagaa 6942656  T
Q  512 tgtattttgtgataattt-catatcatggttttgatttgattatattgttgaatgattatctgtttt 577  Q
    ||||||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  6942655 tgtattttgtgattatttccatatcatggttttgattttaatatattgttgaatgattatctgtttt 6942589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 19 - 495
Target Start/End: Complemental strand, 6935406 - 6934945
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||||    |||| |||||||||| ||||||||||||||||||||||||||    
T  6935406 acagagacatgtacaaaattgttgctccctcgatgttgtgatgaagagctacatggctttcctactctttctggattgatggattgcctctatttttctt 6935307  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||     
T  6935306 atgattttaagaaaacccattatgttatttggcaaatgaaggaatttggagttcaagaatcttggactaaattccttaaaattagttataccaatcttca 6935207  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    | | |||||||||||||| |||   |||            | || ||   |||||||||  ||| |||| |||||| | |||||||||||||||||||||    
T  6935206 acaagattttaaaactcacgagacctat------------tatcctc---ctcgattgattccattgtgcttttctaataatggtgatacattgatattt 6935122  T
Q  319 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagg 418  Q
    || |||||| |||||||||| ||| ||||||||||||||| |||||||| |||||||| |||| |||||| |  ||||| || ||||| || ||||||||    
T  6935121 gcaatcaatctaccagaccaagcatttctctataattggagagataatacagcaaagagaattaaaagtaacggtaaaaatttgtggttcagtgccaagg 6935022  T
Q  419 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttag 495  Q
    ||||||||||||| ||||||||||||||||||| |||| ||| | ||| ||||||||||||||||||||||||||||    
T  6935021 gatatgttgaaagtttggtatcgacttcttgaaggtaattttctcttcaatgatttacttgtttgaatttgtgttag 6934945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 19 - 327
Target Start/End: Complemental strand, 6948068 - 6947760
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    ||||||| ||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||      
T  6948068 acagagagatatacacggttgttgctccctcgatgttgtgatgaagagctacatgatgttccaactctttctgtgttgatggattgcctttgtttttcac 6947969  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    ||||||  ||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||     
T  6947968 atgatttcaagaaaacccactttgttctttggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatgtgaatcttcc 6947869  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    ||| ||| |||||| ||| |||||  |||||| | ||   | | |||   ||| |||||  ||| ||||||||||| | |||||||||||||||||||||    
T  6947868 aaaagatattaaaattcatgagtttcataatggtccaacctattatcctcctcaattgattccactgtgtttttctaacaatggtgatacattgatattt 6947769  T
Q  319 gctatcaat 327  Q
     | ||||||    
T  6947768 acaatcaat 6947760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 299 - 543
Target Start/End: Complemental strand, 6947740 - 6947493
Alignment:
Q  299 atggtgatacattgatatttgctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaat 398  Q
    |||||||||||||||||||| | |||| | |||||||||| ||| ||||||||||||||| ||||||||||| ||||| |||| |||||||||| |||||    
T  6947740 atggtgatacattgatatttacaatcactctaccagaccaagcatttctctataattggagagataatagagtaaagagaattaaaagtaccaacaaaat 6947641  T
Q  399 ttggtggtccactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagctt 498  Q
    || ||||| || |||||| ||||||||||||||||||| |||||  | ||||| |||||||| | || ||||||||||||||||| ||||| ||||| ||    
T  6947640 tttgtggttcagtgccaatggatatgttgaaagcttggcatcgatattttgaaggtaagtttctcttggatgatttacttgtttgtatttgagttagttt 6947541  T
Q  499 gtgtatg--gtacaatgtattttgtga-taatttcatatcatggtttt 543  Q
     ||||||  ||||||| |||| ||||| || ||||| |||||||||||    
T  6947540 atgtatgatgtacaatatattgtgtgattattttcaaatcatggtttt 6947493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 340 - 494
Target Start/End: Original strand, 20770823 - 20770982
Alignment:
Q  340 gcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggatatgttgaaa-----gctt 434  Q
    ||||| |||||||||| |||||||||||||  ||||| ||||||||||||| || ||||||||||||  | ||| ||||  ||||||||||     | ||    
T  20770823 gcaatcctctataatttgaaagataatagactaaagagaattgaaagtacctatgaaatttggtggtatagtgctaaggattatgttgaaagtttggttt 20770922  T
Q  435 ggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 494  Q
    ||||||||| | |||||||||||||  | |||||||||||||||||||||||||||||||    
T  20770923 ggtatcgacctgttgaaagtaagttcctcttcgatgatttacttgtttgaatttgtgtta 20770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 20770534 - 20770720
Alignment:
Q  21 agagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttcttat 120  Q
    ||||||||| | ||| ||||| ||||||| |||||||||||||   | || | ||  || |||||||| ||| |||||||||||  | | ||||||| ||    
T  20770534 agagacatacaaacagttgttactccctcaatgttgtgatgaatttccacttgataatcaaactctttgtgtgttgatggattgtatttgtttttctcat 20770633  T
Q  121 gattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||  ||| |||||  |||||||||| ||||||||||||||||||||| ||||||| || |||| ||||||||||||||||||||||    
T  20770634 gatgttaaaaaaacttattttgttatatggcaaatgaaggaatttggaattgaagagtcatggattcaattccttaaaattagttat 20770720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 17369675 - 17369744
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  17369675 tggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 17369744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 333 - 478
Target Start/End: Original strand, 17369851 - 17369996
Alignment:
Q  333 agaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggatatgttgaaagc 432  Q
    |||||| | ||||||||||||||||| | ||||||||| ||||| |||||||| |||| ||| ||||   |||    || ||||||| ||||||||||||    
T  17369851 agaccaagaaattctctataattggagaaataatagagtaaagaaaattgaaaatacctatagaattatttggaaggcttccaagggctatgttgaaagc 17369950  T
Q  433 ttggtatcgacttcttgaaagtaagtttttgttcgatgatttactt 478  Q
    |||||||| |||| |||||||||||||  | |||||||||||||||    
T  17369951 ttggtatctacttgttgaaagtaagttactcttcgatgatttactt 17369996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 14749393 - 14749463
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    |||||||||||| | |||   |||| ||||||||||||| |||| ||||||||||||||||| ||||||||    
T  14749393 acccattttgttttatggaggatgatggaatttggagttcaagagtcttggactcaattcctcaaaattag 14749463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 24254506 - 24254428
Alignment:
Q  127 aagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||| ||| ||||||||||| ||||| |||  |||||||||||| ||| ||||||||||||||||| | ||||| ||||    
T  24254506 aagagaactcattttgttatatggcagatgtcggaatttggagtcgaacaatcttggactcaattcatcaaaatcagtt 24254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 539 - 579
Target Start/End: Original strand, 17370022 - 17370062
Alignment:
Q  539 gttttgatttgattatattgttgaatgattatctgttttat 579  Q
    ||||||||||||||  |||||||||||||||||| ||||||    
T  17370022 gttttgatttgattgcattgttgaatgattatctattttat 17370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 201
Target Start/End: Complemental strand, 24950214 - 24950150
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaatt 201  Q
    |||||||||| ||| | |||| | | ||||||||||| || ||||||| ||||||||||||||||    
T  24950214 attttgttatatggaagatgatgaagtttggagttgaggagtcttggagtcaattccttaaaatt 24950150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 67)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 19 - 543
Target Start/End: Complemental strand, 1986143 - 1985617
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctacataatgttccaactctttctgtattgatggattgcctctatttttctt 118  Q
    ||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||  |||||||||||||||||| |||||||||||||||||||||||||    
T  1986143 acagagagatatacacagttgttgctccctcgatattgtgatgaagatctacatggtgttccaactctttctgtgttgatggattgcctctatttttctt 1986044  T
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttct 218  Q
    ||||||  |||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||| |||||||||    
T  1986043 atgatttcaagaaaacccattttgttctttggcaaatgaaggaatttggcgttgaagaatcttggactcaattgtttaaaattagttatatgaatcttct 1985944  T
Q  219 aaacgattttaaaactcaggagttatataatgattcattatttcatcgctctcgattgacaccaatgtgtttttctgagaatggtgatacattgatattt 318  Q
    | | ||| |||||| ||| | |||  |||||| | ||   | | |||   |||||||||| ||| ||| |||||| ||||||||||||||||||||||||    
T  1985943 agaagatattaaaattcatgggttcaataatggtccaacctattatcctcctcgattgactccattgtatttttccgagaatggtgatacattgatattt 1985844  T
Q  319 gctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagg 418  Q
    || ||||||  | ||||||| ||| ||||||||||| ||| ||||||||||| | | | |||| |||||||||||| ||||| ||||| || ||||||||    
T  1985843 gcaatcaatccaacagaccaagcatttctctataataggagagataatagagtagaaagaattaaaagtaccaatagaattttgtggttcagtgccaagg 1985744  T
Q  419 gatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatg-gtacaatgtatt 517  Q
    |||| ||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||  |||||| ||||    
T  1985743 gatacgttgaaagcttggtatcgatttcttgaaggtaagtttctcttcgatgatttacttgtttgaatttgtgttagtttgtgtatgtatacaatatatt 1985644  T
Q  518 ttgtga-taatttcatatcatggtttt 543  Q
     ||||| || ||||| |||||||||||    
T  1985643 gtgtgattattttcaaatcatggtttt 1985617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 284 - 473
Target Start/End: Complemental strand, 15571821 - 15571632
Alignment:
Q  284 tgtgtttttctgagaatggtgatacattgatatttgctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattga 383  Q
    ||||| |||||||||| ||||||||  |||||||||| ||||||     |||||| | |||| | |||||||||| | ||||||||| ||||| |||| |    
T  15571821 tgtgtgtttctgagaacggtgatactgtgatatttgcaatcaatcgtagagaccaagtaattgtttataattggagatataatagagtaaagagaattaa 15571722  T
Q  384 aagtaccaataaaatttggtggtccactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatt 473  Q
    ||||| ||| |||||  | ||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15571721 aagtaacaaaaaaatccgttggtccaatgccaggggatatgttgaaagcttggtatcgacttcctgaaagtaagtttttgttcgatgatt 15571632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 18514910 - 18514777
Alignment:
Q  84 tctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttgg 183  Q
    ||||||||| || ||||||||| | | ||||||||||||||  ||||||| ||||||  |||| ||| ||||| | ||||||||||||||| | ||||||    
T  18514910 tctttctgttttaatggattgcatgtgtttttcttatgatttcaagaaaagccatttcattatatggaaaatggacgaatttggagttgaaaactcttgg 18514811  T
Q  184 actcaattccttaaaattagttatacgaatcttc 217  Q
    ||||||||||||||||||||||||| ||||||||    
T  18514810 actcaattccttaaaattagttatatgaatcttc 18514777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 335 - 494
Target Start/End: Original strand, 14076842 - 14077001
Alignment:
Q  335 accaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggatatgttgaaagctt 434  Q
    |||| |||||| |||||||||||| ||||||||||| ||||| |||| ||| |||||||| ||||| |||||    | |||||   ||||||||||||||    
T  14076842 accaagcaattatctataattggagagataatagagtaaagagaattaaaaataccaatagaattttgtggttgcattccaagaattatgttgaaagctt 14076941  T
Q  435 ggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 494  Q
    ||||||||||| | |||||||||||  | ||||||||||||| ||||||||| |||||||    
T  14076942 ggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14077001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 335 - 494
Target Start/End: Original strand, 14386870 - 14387029
Alignment:
Q  335 accaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggatatgttgaaagctt 434  Q
    |||| |||||| |||||||||||| ||||||||||| ||||| |||| ||| |||||||| ||||| |||||    | |||||   ||||||||||||||    
T  14386870 accaagcaattatctataattggagagataatagagtaaagagaattaaaaataccaatagaattttgtggttgcattccaagaattatgttgaaagctt 14386969  T
Q  435 ggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 494  Q
    ||||||||||| | |||||||||||  | ||||||||||||| ||||||||| |||||||    
T  14386970 ggtatcgacttttagaaagtaagttcctcttcgatgatttacatgtttgaatctgtgtta 14387029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 284 - 461
Target Start/End: Complemental strand, 13416834 - 13416657
Alignment:
Q  284 tgtgtttttctgagaatggtgatacattgatatttgctatcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattga 383  Q
    ||||| |||||| ||| |||||||   |||||||||| ||||||   | |||||| | ||||| ||| ||| ||| ||||||||||| ||||| |||| |    
T  13416834 tgtgtgtttctgggaacggtgatatggtgatatttgcaatcaatcgtctagaccaagtaattcactacaataggagagataatagagtaaagagaattaa 13416735  T
Q  384 aagtaccaataaaatttggtggtccactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttt 461  Q
    |||| ||||| |||||||||||| |   |||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  13416734 aagtcccaatcaaatttggtggttcgacgccaagggatatgttgaaagcttggtatcgacttcaagaaagtatgtttt 13416657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 82 - 207
Target Start/End: Complemental strand, 13417036 - 13416911
Alignment:
Q  82 actctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatctt 181  Q
    ||||||||| | ||||  ||||| || | |||||||||||||| |||||||||| ||||| | || ||||||||||||||||||||||||||||| ||||    
T  13417036 actctttctatgttgaatgattgtctttgtttttcttatgattttaagaaaacctattttatcatatggcaaatgaaggaatttggagttgaagagtctt 13416937  T
Q  182 ggactcaattccttaaaattagttat 207  Q
    ||  | ||||| ||||||||||||||    
T  13416936 gggttgaattcgttaaaattagttat 13416911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 14076677 - 14076758
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  14076677 catttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 14076758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 14386705 - 14386786
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  14386705 catttcgttatatggcaaatgaaggaatttggagttgaagactcttggactcaatttcttaaaattagttatcagaatcttc 14386786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 84 - 217
Target Start/End: Complemental strand, 15572018 - 15571885
Alignment:
Q  84 tctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttgg 183  Q
    ||||||||| || |||||||| || | ||||||||||||||  |||  |||||||||||| || |||||||||| ||| |||||||||||||| ||||||    
T  15572018 tctttctgtgtttatggattgtctttgtttttcttatgatttcaagggaacccattttgtcatgtggcaaatgagggagtttggagttgaagagtcttgg 15571919  T
Q  184 actcaattccttaaaattagttatacgaatcttc 217  Q
      |||||||| ||||||||||||| | |||||||    
T  15571918 gttcaattccataaaattagttattcaaatcttc 15571885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 89 - 219
Target Start/End: Complemental strand, 19344693 - 19344563
Alignment:
Q  89 ctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactca 188  Q
    ||||||||||||| ||||| | ||||||| |  ||   ||||| || ||||||||||| ||||| |||| |||||||||||||||| |||||||||||||    
T  19344693 ctgtattgatggactgcctttgtttttctcacaatctcaagaacactcattttgttatatggcagatgatggaatttggagttgaacaatcttggactca 19344594  T
Q  189 attccttaaaattagttatacgaatcttcta 219  Q
    ||| ||||||||||||| |  ||||||||||    
T  19344593 atttcttaaaattagttttcagaatcttcta 19344563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 660916 - 660847
Alignment:
Q  138 ttttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||||||| ||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  660916 ttttgttatatggcagatgaaggaatttcgagttgaagagtcttggactcaattccttaaaattagttat 660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 111 - 206
Target Start/End: Complemental strand, 19604559 - 19604464
Alignment:
Q  111 tttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||| |||||| | | ||||| || ||| |||| ||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  19604559 tttttctcatgattttcataaaactcactttattatatggcagatgaaggaatttggagttgaagactcctggactcaattccttaaaattagtta 19604464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 127 - 200
Target Start/End: Original strand, 22021382 - 22021455
Alignment:
Q  127 aagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 200  Q
    |||||||||||||| ||||| ||||| |||| ||| | ||||||||||||||||||||||||||| ||||||||    
T  22021382 aagaaaacccatttggttatatggcagatgatggattatggagttgaagaatcttggactcaattacttaaaat 22021455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 6864914 - 6864807
Alignment:
Q  99 ggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaa 198  Q
    |||||| |||||||||||| ||||||  ||  |||| ||||| || || |||  |||||||||||||||||||||||| ||||||||||| |||||||||    
T  6864914 ggattgtctctatttttctcatgatttcaaacaaactcattt-gtaatatggttaatgaaggaatttggagttgaagagtcttggactcagttccttaaa 6864816  T
Q  199 attagttat 207  Q
    | |||||||    
T  6864815 actagttat 6864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 29867221 - 29867305
Alignment:
Q  122 attctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    |||||||| ||||  ||||| |||| |||||||||||| |||| || |||||||| ||||||||||||||||||| |||||||||    
T  29867221 attctaaggaaactgattttattatatggcaaatgaagaaattcggggttgaagattcttggactcaattccttagaattagtta 29867305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 22028622 - 22028696
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||||||||||| ||| |||||| ||| | |||||||||||| |||||||||||||| ||||| |||||||    
T  22028622 aaacccattttgttatatggaaaatgacggattatggagttgaagagtcttggactcaattacttaagattagtt 22028696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 29454173 - 29454103
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||||||| ||||  |||| | |||||||||||||||| ||||||||||||||| ||||||||||||||    
T  29454173 attttgttatatggcggatgatgaaatttggagttgaagattcttggactcaattctttaaaattagttat 29454103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 29881267 - 29881325
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||| |||||||||    
T  29881267 tggcaaatgaagaaatttggggttgaagattcttggactcaattccttagaattagtta 29881325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 137 - 205
Target Start/End: Complemental strand, 12819986 - 12819918
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||| | ||||| |||| |||||||||||||||| |||| |||||||||||||||||||| ||||    
T  12819986 attttgttgtatggcagatgacggaatttggagttgaacaatcctggactcaattccttaaaatcagtt 12819918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 19351143 - 19351071
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||||||| | ||||| |||| ||||||||||||||| || |||||||||| |||||| ||||||||||    
T  19351143 acccattttgttttatggcagatgatggaatttggagttgaggagtcttggactccattcctcaaaattagtt 19351071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 20058153 - 20058057
Alignment:
Q  111 tttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||| ||||||| |||| |||  ||||||||||| ||| ||||| |||||||  |||||||||| ||||||  |||||| |||||||||||||||    
T  20058153 tttttcgtatgattttaagcaaagtcattttgttatatggaaaatggaggaattcagagttgaagagtcttggtgtcaatttcttaaaattagttat 20058057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 20352089 - 20352165
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| |||||||| || ||| ||||||||||||||||||||||||| || ||||||||| |  ||||||||||||||    
T  20352089 aaactcattttgtaatatgggaaatgaaggaatttggagttgaagattcatggactcaactttttaaaattagttat 20352165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 22063636 - 22063712
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||||||||| ||||||||||||||||||||| || |||| ||||||||||| ||  | ||||||||||||    
T  22063636 aaactcattttgttatatggcaaatgaaggaatttggatttcaagagtcttggactcagttattcaaaattagttat 22063712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 22100467 - 22100563
Alignment:
Q  111 tttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||||| ||||||  || ||||| |||||| |||| |||||||||||| ||||||||||| |||| ||||||||||| ||  | ||||||||||||    
T  22100467 tttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 22100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 29874517 - 29874581
Alignment:
Q  143 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| ||| |||||||||||||||    
T  29874517 ttatatggcaaatgaagaaatttggggttgaagattcttggactccattacttaaaattagttat 29874581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 29922063 - 29921980
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttctaa 220  Q
    |||||||||| ||||| |||||| ||||||| | |||||| |||||| |||||||||||| ||||||||||   ||||||||||    
T  29922063 attttgttatatggcagatgaagaaatttggggatgaagattcttggtctcaattccttagaattagttatcaaaatcttctaa 29921980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 9807814 - 9807871
Alignment:
Q  127 aagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttgga 184  Q
    ||||||||| |||| ||||| ||||| ||||||||||||||||||||||| |||||||    
T  9807814 aagaaaaccgatttcgttatatggcagatgaaggaatttggagttgaagagtcttgga 9807871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 412 - 556
Target Start/End: Complemental strand, 18514618 - 18514468
Alignment:
Q  412 gccaagggatatgttgaaagcttggtatc----gacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgttagcttgtgtatg-g 506  Q
    ||||||| ||||||||| |||||| ||||    ||||| | ||||||||||   |||||  ||||||||||||||||||||| ||||  | ||||  | |    
T  18514618 gccaaggcatatgttgagagcttgatatctacagacttgtggaaagtaagtccctgttccgtgatttacttgtttgaatttgagttaaatcgtgtccgtg 18514519  T
Q  507 tacaatgtattttgtgataattt-catatcatggttttgatttgattatat 556  Q
    ||||||||||  ||| || |||| |||||||||||||||||||||||||||    
T  18514518 tacaatgtatcgtgtcattattttcatatcatggttttgatttgattatat 18514468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 18952979 - 18952906
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||||| | || ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18952979 acccattttatcatatggcagatgaaggaatttggagttgacaagtcatggactcagttccttaaaattagtta 18952906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 18983026 - 18982953
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||||| | || ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18983026 acccattttatcatatggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18982953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 18997672 - 18997599
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||||| | || ||||| ||||||||||||||||||||  | || |||||||| |||||||||||||||||    
T  18997672 acccattttatcatatggcagatgaaggaatttggagttgacaagtcctggactcagttccttaaaattagtta 18997599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 13417108 - 13417060
Alignment:
Q  22 gagacatatacacaattgttgctccctcgatgttgtgatgaagagctac 70  Q
    |||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  13417108 gagacatatacacagttgttgctacctcgatgttgtgaggaagagctac 13417060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 206
Target Start/End: Original strand, 20338917 - 20338993
Alignment:
Q  130 aaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||| |||||||| || ||| ||||||||||||| ||||||||||| |||||||||||| || || |||| |||||    
T  20338917 aaaactcattttgtaatatggaaaatgaaggaattaggagttgaagattcttggactcaactctttcaaatcagtta 20338993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 215
Target Start/End: Original strand, 22070110 - 22070189
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatct 215  Q
    |||||| |||| |||||||||||| ||||||||||| |||| ||||||||||  ||  | ||||||||||||| ||||||    
T  22070110 cattttattatatggcaaatgaagcaatttggagttcaagagtcttggactcggttattcaaaattagttataagaatct 22070189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 36263028 - 36263119
Alignment:
Q  112 ttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    |||||| |||| | |||||||||  |||||||||| ||| | ||| | ||||||||||||||||| |||||||||||| || ||||| ||||    
T  36263028 ttttctaatgactataagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggactcaactcattaaagttag 36263119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 19326065 - 19325987
Alignment:
Q  127 aagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||| ||| ||||||||||| ||||| |||  |||||||||||| ||| ||||||||||||||||| | ||||| ||||    
T  19326065 aagagaactcattttgttatatggcatatgtcggaatttggagtagaacaatcttggactcaattcatcaaaatcagtt 19325987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 19637287 - 19637217
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||| |||| |||||||||||||||||||||||| |||| || |||| ||   |||||||||||||||||    
T  19637287 attttattatatggcaaatgaaggaatttggagttcaagagtcgtggattcggctccttaaaattagttat 19637217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 20374579 - 20374493
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    |||| |||||||| || ||| ||||||||||||||||||||| ||| || |||| |||| |  |||||||||||||||  |||||||    
T  20374579 aaactcattttgtaatatgggaaatgaaggaatttggagttggagattcatggattcaactttttaaaattagttataataatcttc 20374493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 29859454 - 29859524
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||| ||| | |||||| |||||||||||||||| |||||||| | ||| |||||||||||||||    
T  29859454 atttcgttatatgggagatgaagaaatttggagttgaagattcttggaccccatttcttaaaattagttat 29859524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 29106814 - 29106883
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    |||||||| | ||||| |||||| ||||||| |||||||| |||||||||||| |  |||||||||||||    
T  29106814 attttgttgtatggcagatgaagaaatttggggttgaagagtcttggactcaactttttaaaattagtta 29106883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 29431086 - 29431001
Alignment:
Q  122 attctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||||| | ||| |||||||||| ||||  |||| | ||||||| | | |||| |||||||| |||||||||||||||||||||    
T  29431086 attctaaggacacctattttgttatatggcggatgatgaaatttggggctaaagattcttggacccaattccttaaaattagttat 29431001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 29445732 - 29445663
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 200  Q
    ||||| ||||| |||| ||||| ||||||||||| || |||||||| |||||||||||||| || |||||    
T  29445732 aaaccgattttcttatatggcagatgaaggaattaggggttgaagactcttggactcaatttctaaaaat 29445663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 15443922 - 15444018
Alignment:
Q  95 tgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||||| || | ||||||||||||||| || | |||    |||||| | ||||| |||||||| | |||||||||||| ||||||||||||||    
T  15443922 tgatggattgtctttgtttttcttatgattccaatacaactggatttgttttatggcatatgaaggagtatggagttgaagagtcttggactcaatt 15444018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 19357906 - 19357978
Alignment:
Q  133 acccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||| ||| | ||| | |||| ||||||||||||| |||| ||||||||||||||| | ||||||||||    
T  19357906 acccatttcgttttatggaagatgatggaatttggagttcaagagtcttggactcaattcttaaaaattagtt 19357978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 19722018 - 19722086
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||| | ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||| ||||    
T  19722018 attttgttttatggaagatgatggaatttggagttcaagattcttggactcaattcctcaaaatcagtt 19722086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 421 - 493
Target Start/End: Original strand, 22064356 - 22064428
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtt 493  Q
    |||| |||||| ||||| |||  || |||||||||||||| | | ||| ||||||||||||||||||||||||    
T  22064356 tatgatgaaaggttggtttcgtattgttgaaagtaagtttctttacgacgatttacttgtttgaatttgtgtt 22064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 187
Target Start/End: Original strand, 22080862 - 22080918
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactc 187  Q
    |||| |||||| |||| |||||||||||| ||||||||||| |||| ||||||||||    
T  22080862 aaactcattttattatatggcaaatgaagcaatttggagttcaagagtcttggactc 22080918  T

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Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 205
Target Start/End: Original strand, 29899374 - 29899442
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||||| ||||| |||||| ||||||| |||||||| || |||||||||||  | ||||||||||    
T  29899374 attttgttatatggcagatgaagaaatttggggttgaagagtcctggactcaatttttaaaaattagtt 29899442  T

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Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 18514996 - 18514945
Alignment:
Q  19 acagagacatatacacaattgttgctccctcgatgttgtgatgaagagctac 70  Q
    ||||||||||||||||| || ||||||||||||| |||| || |||||||||    
T  18514996 acagagacatatacacagttcttgctccctcgatcttgtaataaagagctac 18514945  T

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Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 19350870 - 19350803
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 488  Q
    |||||||||||||| || || || |||||||||||||||| | ||  |||||||| ||||||||||||    
T  19350870 tatgttgaaagcttagtttcaacctcttgaaagtaagtttctctttaatgatttaattgtttgaattt 19350803  T

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Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 19645689 - 19645630
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||| ||||||||||||||| ||||||| || |||||||  || |||||||||||||||    
T  19645689 tggcagatgaaggaatttggaattgaagagtcatggactctgttacttaaaattagttat 19645630  T

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Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 203
Target Start/End: Original strand, 36260228 - 36260319
Alignment:
Q  112 ttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    |||||| ||||||  ||||||||  |||||||||| ||| | ||| | ||||||||||||||||| ||||||| |||| |  ||||||||||    
T  36260228 ttttctaatgattacaagaaaactgattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaacttattaaaattag 36260319  T

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Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 13888172 - 13888098
Alignment:
Q  129 gaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    ||||||| |||||||||| ||| ||||||   |||||||||  ||| | ||||||||||||||||||||| ||||    
T  13888172 gaaaaccaattttgttatatggaaaatgacaaaatttggagacgaaaagtcttggactcaattccttaaatttag 13888098  T

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Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 14076580 - 14076618
Alignment:
Q  22 gagacatatacacaattgttgctccctcgatgttgtgat 60  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  14076580 gagacatatacacaattgttactccctccatgttgtgat 14076618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 22 - 60
Target Start/End: Original strand, 14386608 - 14386646
Alignment:
Q  22 gagacatatacacaattgttgctccctcgatgttgtgat 60  Q
    |||||||||||||||||||| ||||||| ||||||||||    
T  14386608 gagacatatacacaattgttactccctccatgttgtgat 14386646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 19374778 - 19374824
Alignment:
Q  159 ggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    ||||||||||||||||   |||||||||||||| |||||||||||||    
T  19374778 ggaatttggagttgaacggtcttggactcaatttcttaaaattagtt 19374824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 411 - 485
Target Start/End: Complemental strand, 19597475 - 19597401
Alignment:
Q  411 tgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaa 485  Q
    |||||| | |||||||||||||||||| ||||||  || ||||||||||| | ||| |  |||||||||||||||    
T  19597475 tgccaatgaatatgttgaaagcttggtttcgactaattaaaagtaagtttcttttcaacaatttacttgtttgaa 19597401  T

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Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 21218778 - 21218712
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    |||| ||||| |||||||||| ||||||||||| |||  | ||||||||||||||||| ||| ||||    
T  21218778 atttggttatatggcaaatgacggaatttggagatgataagtcttggactcaattcctcaaatttag 21218712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 459
Target Start/End: Complemental strand, 22524978 - 22524940
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtt 459  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  22524978 tatgttgaaagcttggtttcaacttcttgaaagtaagtt 22524940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 24002201 - 24002279
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    |||||| | ||||| |||||||| |  |||||| |||| |||||||||||||| ||||| |||||||||  ||||||||    
T  24002201 tttgttttatggcatatgaaggagtacggagttcaagagtcttggactcaattacttaagattagttatcagaatcttc 24002279  T

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Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 191
Target Start/End: Original strand, 26256732 - 26256829
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||| ||||| | ||||||| ||||| | ||| |||   |||||||| | ||||| |||||||| | ||||||| |||| ||||||||||||||    
T  26256732 ttgatggaatgcctttgtttttctcatgataccaaggaaaatgattttgttttatggcagatgaaggagtatggagttcaagagtcttggactcaatt 26256829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 95 - 191
Target Start/End: Original strand, 15508704 - 15508800
Alignment:
Q  95 tgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||||| || | ||||||||||||||| || |||||    |||||| | ||||| |||||||| | |||||||||| | ||| ||||||||||    
T  15508704 tgatggattgtctttgtttttcttatgattccaataaaactggatttgttttttggcatatgaaggagtatggagttgaatagtctaggactcaatt 15508800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 634
Target Start/End: Complemental strand, 15571453 - 15571409
Alignment:
Q  590 ttttctcaattttatttactgttctaattttgagtttttatgtgt 634  Q
    |||| |||||||||||||||||| |||||||||| ||||| ||||    
T  15571453 ttttttcaattttatttactgttttaattttgagcttttaagtgt 15571409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 493
Target Start/End: Complemental strand, 18982738 - 18982666
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtt 493  Q
    ||||||||||||||||| ||||||  |||||||||| ||| | ||| |  ||||||||| |||||||| ||||    
T  18982738 tatgttgaaagcttggtttcgactagttgaaagtaaatttcttttcaactatttacttgattgaatttttgtt 18982666  T

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Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 20133376 - 20133340
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttgga 184  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  20133376 tggcaaatgaaagaatttggagttgaagattcttgga 20133340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 20140877 - 20140841
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttgga 184  Q
    ||||||||||||||||||||||||||| | |||||||    
T  20140877 tggcaaatgaaggaatttggagttgaaaattcttgga 20140841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 284 - 569
Target Start/End: Original strand, 7607 - 7887
Alignment:
Q  284 tgtgtttttctgagaatggtgatacattgatatttgctatcaat-ataccagaccaggcaattctctataattggaaagataatagagcaaagataattg 382  Q
    ||||| |||| |||||||||||||||||||||||||| | |||| |||| |||||  |||||| ||||||||| || ||||||||||| ||| | ||||     
T  7607 tgtgtgtttccgagaatggtgatacattgatatttgcaaccaatcatac-agacctagcaattgtctataatttgagagataatagagtaaatagaatta 7705  T
Q  383 aaagtaccaataaaatttggtggtccactgccaagggatatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgttt 482  Q
    ||||||||||| |||||  ||||| || ||||||||||||||| |||||||||||| |||||||||||| ||| | ||||| ||||| ||||||||||||    
T  7706 aaagtaccaatcaaattccgtggttcaatgccaagggatatgtagaaagcttggtaccgacttcttgaaggtatg-ttttgctcgatcatttacttgttt 7804  T
Q  483 gaatttgtgttagcttgtgtatggtacaatgtattttgtga-taatttcatatcatggttttgatttgattatattgttgaatgatta 569  Q
    |||||| |||||| ||||     ||||| ||| || ||||| || |||||||| ||||||||||||||||||||||||| || |||||    
T  7805 gaatttttgttagtttgt-----gtacattgtcttgtgtgattattttcatattatggttttgatttgattatattgttcaacgatta 7887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 7474 - 7543
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    |||||||||||||||||||||||||| || ||||||  |||||||||||||||||| |||  ||||||||    
T  7474 tggcaaatgaaggaatttggagttgatgagtcttgggttcaattccttaaaattagctatcggaatcttc 7543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 3e-34; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 53774797 - 53774919
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattcc 193  Q
    |||||||||||  | | |||||||||||||| |||  |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  53774797 ttgatggattgtatttgtttttcttatgattttaaagaaactcattttgttatatggcaaatgaaggaatttggagttgaagagtcttggactcaattcc 53774896  T
Q  194 ttaaaattagttatacgaatctt 216  Q
    ||||||||||||||  |||||||    
T  53774897 ttaaaattagttatcagaatctt 53774919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 3565701 - 3565814
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattcc 193  Q
    |||| ||| ||||| | ||||||||||  || |||||||||| ||||| |||| ||||| |||||||||||||| |||||||| |||||||||||||| |    
T  3565701 ttgagggactgcctttgtttttcttattgttataagaaaaccgattttattatatggcagatgaaggaatttggggttgaagagtcttggactcaatttc 3565800  T
Q  194 ttaaaattagttat 207  Q
    ||||||||||||||    
T  3565801 ttaaaattagttat 3565814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 11971058 - 11970982
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||    
T  11971058 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcttggactcaatttcttagaattagttat 11970982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 3557720 - 3557796
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||| ||||| |||| ||||| |||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  3557720 aaaccgattttattatatggcatatgaaggaatttggggttgaagagtcttggactcaatttcttaaaattagttat 3557796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 11981759 - 11981683
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||||||||| ||||||||||||||||||||||| ||||| || ||||||| ||| |||||||||||||||    
T  11981759 aaactcattttgttatatggcaaatgaaggaatttggagtggaagagtcctggactcgatttcttaaaattagttat 11981683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 207
Target Start/End: Complemental strand, 3561066 - 3560958
Alignment:
Q  99 ggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaa 198  Q
    ||||||||| | ||||||||||  ||  ||| ||||| ||||| |||| ||||| |||||  ||||||| |||||||| |||||||||||||| ||||||    
T  3561066 ggattgcctttgtttttcttattcttacaaggaaaccgattttattatttggcagatgaaaaaatttggggttgaagagtcttggactcaatttcttaaa 3560967  T
Q  199 attagttat 207  Q
    |||||||||    
T  3560966 attagttat 3560958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 8443567 - 8443454
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattcc 193  Q
    |||||||| || || | ||||||||||||||  |||| ||| |||| |||||| ||||| |||||||| ||||||||| | || ||||||| ||||||      
T  8443567 ttgatggactgtctttgtttttcttatgatttcaagagaactcattatgttatttggcagatgaaggattttggagttcacgagtcttggattcaattat 8443468  T
Q  194 ttaaaattagttat 207  Q
    ||||||||||||||    
T  8443467 ttaaaattagttat 8443454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 421 - 494
Target Start/End: Original strand, 53775101 - 53775174
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgtta 494  Q
    |||||||||||||||||||| || | |||||||||||||  | ||| | |||||||||||||||||||||||||    
T  53775101 tatgttgaaagcttggtatcaacgtgttgaaagtaagttcctcttccaagatttacttgtttgaatttgtgtta 53775174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 130 - 203
Target Start/End: Original strand, 837769 - 837842
Alignment:
Q  130 aaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattag 203  Q
    ||||||||||||||||| |||||||||||| | ||||| ||| |||| ||||||| ||||||  ||||||||||    
T  837769 aaaacccattttgttatatggcaaatgaagaattttggtgttcaagagtcttggattcaattatttaaaattag 837842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 202
Target Start/End: Original strand, 35767017 - 35767083
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaatta 202  Q
    ||||||||||| ||| | ||| | ||||||||||||||||| ||||||| |||| ||||||||||||    
T  35767017 cattttgttatatggaagatggaagaatttggagttgaagagtcttggattcaactccttaaaatta 35767083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 6372439 - 6372516
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 208  Q
    ||||||||||| |||| |||||||||||||| | ||||||| |||| |||| || ||||||   ||||||||||||||    
T  6372439 aaacccattttattatatggcaaatgaaggattctggagttcaagagtcttagattcaattatataaaattagttata 6372516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 206
Target Start/End: Complemental strand, 53430169 - 53430100
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||| || ||||| |||||| ||| ||| |  ||||| |||||||||||||||||||||||||||||    
T  53430169 attttgtcatatggcagatgaagaaatatggggccgaagattcttggactcaattccttaaaattagtta 53430100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 143 - 207
Target Start/End: Complemental strand, 1686349 - 1686285
Alignment:
Q  143 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||| |||||||||||||| ||||| || |||||||||||||| ||||||  |||||||    
T  1686349 ttatatggcagatgaaggaatttggcgttgacgagtcttggactcaatttcttaaatatagttat 1686285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 6392815 - 6392893
Alignment:
Q  131 aaacccattttgttatc---tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||||||||| |||   |||||||||||||| ||||||||| | || ||||||| ||||||  |||||||||||||    
T  6392815 aaacccattttgtcatcatatggcaaatgaaggattttggagttcacgagtcttggattcaattatttaaaattagtta 6392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 53790577 - 53790621
Alignment:
Q  161 aatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||    
T  53790577 aatttggatttgaacaatcttggactcaatttcttaaaattagtt 53790621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 6113090 - 6113149
Alignment:
Q  148 tggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| ||||| ||||||||||||| |||| ||||||||||| ||||||  ||||||||||    
T  6113090 tggcgaatgatggaatttggagttaaagagtcttggactcagttccttcgaattagttat 6113149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 169
Target Start/End: Original strand, 10475164 - 10475239
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggag 169  Q
    ||||||||||| || | ||||| ||||||||   | || |||||||||||||| |||||||||||||| |||||||    
T  10475164 ttgatggattgtctttgtttttgttatgatttccaaaatacccattttgttatatggcaaatgaaggattttggag 10475239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 459
Target Start/End: Original strand, 2911335 - 2911373
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtt 459  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  2911335 tatgtagaaagcttggtatcaacttcttgaaagtaagtt 2911373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 421 - 491
Target Start/End: Complemental strand, 11970792 - 11970722
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtg 491  Q
    ||||||||||||||||| | |  || |||||||||||||| | | |||  |||||||||||||||||||||    
T  11970792 tatgttgaaagcttggttttgtattgttgaaagtaagtttctctacgacaatttacttgtttgaatttgtg 11970722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 10464226 - 10464299
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttgg 167  Q
    ||||||||||| || | ||||| ||||||||   | || |||||||||||||| |||||||||||||| |||||    
T  10464226 ttgatggattgtctttgtttttgttatgatttccaaaatacccattttgttatatggcaaatgaaggattttgg 10464299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 517 - 578
Target Start/End: Original strand, 53775166 - 53775226
Alignment:
Q  517 tttgtgataatttcatatcatggttttgatttgattatattgttgaatgattatctgtttta 578  Q
    |||||| |||||| |||| || |||||||||||||| ||||||||||||||| ||| |||||    
T  53775166 tttgtgttaattt-atatgatagttttgatttgattgtattgttgaatgattctctctttta 53775226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 10468042 - 10468118
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaat 213  Q
    |||||||||| |||||||||||||| ||||||||| |    ||||||| ||||||  ||||||||| ||||| ||||    
T  10468042 attttgttatatggcaaatgaaggattttggagttcagtcgtcttggattcaattatttaaaattacttataagaat 10468118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 424 - 492
Target Start/End: Complemental strand, 11981490 - 11981422
Alignment:
Q  424 gttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaatttgtgt 492  Q
    |||||||||||||| |||  || |||||||||||||| | | | |  ||||||||||||||||||||||    
T  11981490 gttgaaagcttggtttcgtattgttgaaagtaagtttctctacaacaatttacttgtttgaatttgtgt 11981422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 8e-32; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 14514874 - 14514980
Alignment:
Q  111 tttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacg 210  Q
    ||||||||||||||  |||||||||||| ||||||| ||| ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  14514874 tttttcttatgatttcaagaaaacccatcttgttatatggaaaatggatgaatttggagttgaagattcttggactcaattccttaaaattagttatatg 14514973  T
Q  211 aatcttc 217  Q
    |||||||    
T  14514974 aatcttc 14514980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 18908885 - 18908811
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||||||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18908885 aaacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18908811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 18920841 - 18920767
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||||||||||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18920841 aaacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18920767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 132 - 205
Target Start/End: Complemental strand, 18913632 - 18913559
Alignment:
Q  132 aacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    ||||||||||||||| ||| | |||| ||||||||||||| |||| ||||||||||||||||| ||||||||||    
T  18913632 aacccattttgttatatggaagatgatggaatttggagttcaagagtcttggactcaattcctcaaaattagtt 18913559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 340 - 486
Target Start/End: Original strand, 14515067 - 14515217
Alignment:
Q  340 gcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggatatgttgaaagcttggtat 439  Q
    |||||||| || ||||||||||||||||||| ||||| |||  |||| ||||||| ||||   |||  ||  ||||||| |||||||||||| ||| |||    
T  14515067 gcaattctttacaattggaaagataatagagtaaagagaatcaaaagcaccaatagaattacatggagcagggccaaggcatatgttgaaagtttgatat 14515166  T
Q  440 cgac----ttcttgaaagtaagtttttgttcgatgatttacttgtttgaat 486  Q
    ||||    || || ||||||||||  ||||| |||||||||||||||||||    
T  14515167 cgacagacttgttaaaagtaagttcctgttcaatgatttacttgtttgaat 14515217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 18908577 - 18908517
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtt 481  Q
    ||||||||||||||||| || || |||||||||||||||||| |||||||||||| |||||    
T  18908577 tatgttgaaagcttggtttcaacctcttgaaagtaagtttttcttcgatgatttaattgtt 18908517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 554471 - 554546
Alignment:
Q  132 aacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||||| || |||| ||||||||||  |||| ||||||| |||| |||||||||||||| |||||||||||||||    
T  554471 aacccatcttattatatggcaaatgatagaatatggagttaaagagtcttggactcaattacttaaaattagttat 554546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 20975557 - 20975612
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    ||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||||    
T  20975557 cattttgttatatggcaaatgagggaatttggagttgaagattcttggattcaatt 20975612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 481
Target Start/End: Complemental strand, 18913325 - 18913265
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtt 481  Q
    |||||||||||||||||||| || |||||||||||||||| | ||| |||||||| |||||    
T  18913325 tatgttgaaagcttggtatcaacctcttgaaagtaagtttctcttcaatgatttaattgtt 18913265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 137 - 191
Target Start/End: Original strand, 25698507 - 25698561
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||||| ||||||||||  ||||||||||||||||| ||||||||| ||||    
T  25698507 attttgttatatggcaaatgagagaatttggagttgaagactcttggactaaatt 25698561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 25377072 - 25377144
Alignment:
Q  135 ccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||||||||| |||   |||||||| ||||||||| |||| ||||||| ||||||  ||||||||||||||    
T  25377072 ccattttgttatatggatgatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttat 25377144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 20712331 - 20712266
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 488  Q
    ||||| ||||||||||| || |||| |||||||||||||  | ||  |||||||||||||||||||||    
T  20712331 tatgtcgaaagcttggtttcaacttgttgaaagtaagttcctctt--atgatttacttgtttgaattt 20712266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 94 - 205
Target Start/End: Original strand, 29647633 - 29647744
Alignment:
Q  94 ttgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattcc 193  Q
    |||||||||||||| | ||||||| |  ||  ||||||||| ||||||||||| ||||||||||  ||||||||| ||||| ||||||||||||||||||    
T  29647633 ttgatggattgcctttgtttttctcaccatcttaagaaaactcattttgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattcc 29647732  T
Q  194 ttaaaattagtt 205  Q
    ||||||||||||    
T  29647733 ttaaaattagtt 29647744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 18964952 - 18964820
Alignment:
Q  85 ctttctgtattgatggattgcctctatttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttgga 184  Q
    |||| |||||||||| ||||||| | |||| || |||||  | | ||||| |||||  |||| ||||||||||||||||||||||||||||| |||||||    
T  18964952 ctttgtgtattgatgaattgcctttgttttactcatgatcttgaaaaaactcatttcattatatggcaaatgaaggaatttggagttgaagactcttgga 18964853  T
Q  185 ctcaattccttaaaattagttatacgaatcttc 217  Q
    ||||||| ||||||||| |||||  ||||||||    
T  18964852 ctcaatttcttaaaatttgttatcagaatcttc 18964820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 29597628 - 29597554
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    |||| ||||||||||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||    
T  29597628 aaactcattttgttatatggcaaatgattgaatttggagttgaacaatcttggactcaattccttaaaattagtt 29597554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 126 - 205
Target Start/End: Original strand, 29642348 - 29642427
Alignment:
Q  126 taagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtt 205  Q
    ||||||||| ||||| ||||| ||||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  29642348 taagaaaactcatttcgttatatggcaaatgatagaatttggatttgaacaatcttggactcaattccttaaaattagtt 29642427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 323 - 482
Target Start/End: Complemental strand, 18964720 - 18964561
Alignment:
Q  323 tcaatataccagaccaggcaattctctataattggaaagataatagagcaaagataattgaaagtaccaataaaatttggtggtccactgccaagggata 422  Q
    ||||||||  |||||| ||||||||||||||||||| ||||||||||| ||||| |||||||| |||   |||||  |  |||    || ||||||| ||    
T  18964720 tcaatataagagaccaagcaattctctataattggagagataatagagtaaagaaaattgaaaatacatgtaaaaaattttggaaggcttccaagggcta 18964621  T
Q  423 tgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgttt 482  Q
    ||||||||||||| |||| |||| |||||||||||||  | || ||||| ||||||||||    
T  18964620 tgttgaaagcttgatatctacttgttgaaagtaagttcctctttgatgacttacttgttt 18964561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 24330975 - 24330900
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||| |||||||||| ||| | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  24330975 aaaccgattttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 24330900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 23086784 - 23086833
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactca 188  Q
    |||||||| ||||| |||||||| ||||||||| |||| |||||||||||    
T  23086784 tttgttatatggcagatgaaggagtttggagttcaagagtcttggactca 23086833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 28763980 - 28763912
Alignment:
Q  132 aacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 200  Q
    ||||||||||||||| ||| | |||| | |||||||||||||| | ||||||| || |||||| |||||    
T  28763980 aacccattttgttatatggaagatgacgcaatttggagttgaaaagtcttggagtcgattcctcaaaat 28763912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 2e-20; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 4570927 - 4570998
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 208  Q
    |||||||||| |||||||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  4570927 attttgttatatggcaaatgaagaaatttggggttgaagattcttggactcaattgcttaaaattagttata 4570998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 50645556 - 50645484
Alignment:
Q  136 cattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 208  Q
    ||||||||||| |||||||||||||| ||||||||| |||| ||||||| ||||||  |||||||||||||||    
T  50645556 cattttgttatgtggcaaatgaaggattttggagttcaagagtcttggattcaattatttaaaattagttata 50645484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 21855459 - 21855384
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||| |||||||||| ||| | |||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  21855459 aaaccgattttgttatatgggagatgaaggaatttggggttgaagattcttggactcaactccttaaagttagtta 21855384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 4015032 - 4014966
Alignment:
Q  140 ttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||| |||||||    
T  4015032 ttgttatatggcagatgaagaaatttggggttgaagattcttggactcaattccttaaagttagtta 4014966  T

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Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 39379131 - 39379061
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||| |||| ||||| |||||||||||||| |||||||| |||||||||||||| |||||||| ||||||    
T  39379131 attttattatatggcagatgaaggaatttggggttgaagagtcttggactcaatttcttaaaatcagttat 39379061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 10218985 - 10219054
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    |||||||| | |||||||||||| |||||||  ||||||| |||||||||||||| ||||||||||||||    
T  10218985 attttgttgtatggcaaatgaagaaatttgggattgaagattcttggactcaattacttaaaattagtta 10219054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 15961233 - 15961298
Alignment:
Q  142 gttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||| ||| |||||||| ||||||||| |||||||||||||||||||||| ||||| ||| ||||    
T  15961233 gttatatggaaaatgaagaaatttggagctgaagaatcttggactcaattctttaaagttaattat 15961298  T

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Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 17560843 - 17560772
Alignment:
Q  137 attttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttata 208  Q
    |||| ||||| ||||| |||||| ||||||| |||||||| |||||||| | |||||||| |||||||||||    
T  17560843 atttggttatatggcacatgaagaaatttggggttgaagattcttggacaccattccttataattagttata 17560772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 144 - 206
Target Start/End: Complemental strand, 4016835 - 4016773
Alignment:
Q  144 tatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    ||||||||| |||||| |||||||||||||||| || |||||||| ||  ||||| |||||||    
T  4016835 tatctggcagatgaagaaatttggagttgaagattcctggactcagttgtttaaatttagtta 4016773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 143 - 207
Target Start/End: Original strand, 3625740 - 3625804
Alignment:
Q  143 ttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||||||| |||||||||||||||    
T  3625740 ttatatggcaaatgaagaaatttggggttgaagagtcttggactcaatttcttaaaattagttat 3625804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 25901351 - 25901279
Alignment:
Q  135 ccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||||||||| ||| |||||||||| ||| ||||| |||| ||||||| ||||||  | ||||||||||||    
T  25901351 ccattttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25901279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 25915369 - 25915297
Alignment:
Q  135 ccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    |||||||||||| ||| |||||||||| ||| ||||| |||| ||||||| ||||||  | ||||||||||||    
T  25915369 ccattttgttatatggaaaatgaaggattttcgagttcaagagtcttggattcaattgttaaaaattagttat 25915297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 3837904 - 3837960
Alignment:
Q  132 aacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactca 188  Q
    ||||||||||||| | ||| ||||||| || ||||||||| |||| |||||||||||    
T  3837904 aacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactca 3837960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 111 - 207
Target Start/End: Complemental strand, 4765 - 4669
Alignment:
Q  111 tttttcttatgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttat 207  Q
    ||||||| ||||||  || ||||| |||||| |||| |||||||||||| ||||||||||| |||| ||||||||||| ||  | ||||||||||||    
T  4765 tttttctcatgatttcaaaaaaactcattttattatatggcaaatgaagaaatttggagttcaagagtcttggactcagttattcaaaattagttat 4669  T

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Target: chr8 (Bit Score: 39; Significance: 0.000000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 27618473 - 27618571
Alignment:
Q  119 atgattctaagaaaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaattagttatacgaatcttc 217  Q
    |||||| |||| |||| ||||||||||| ||| ||||| | ||| | ||||||||||| ||||||||||| || |||||| ||||||||  ||||||||    
T  27618473 atgattttaagcaaactcattttgttatatggaaaatggaagaactcggagttgaagagtcttggactcagttgcttaaagttagttatcagaatcttc 27618571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 191
Target Start/End: Original strand, 29390288 - 29390340
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||| ||||| |||| |||||||||||||||||||||||| ||| ||||    
T  29390288 tttgttatatggcagatgagggaatttggagttgaagaatcttgaactaaatt 29390340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 42846501 - 42846461
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagtt 171  Q
    |||||||||||||||| |||||||||||||| |||||||||    
T  42846501 aaacccattttgttatttggcaaatgaaggattttggagtt 42846461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 11338644 - 11338592
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||| ||||||||||| || |||||| || ||||||||||| |||||||    
T  11338644 tttgttatatggcaaatgaaagagtttggatttcaagaatcttggtctcaatt 11338592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 11339487 - 11339435
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||| ||||||||||  || |||||| || |||||||||||||||||||    
T  11339487 tttgttatatggcaaatgagcgagtttggatttcaagaatcttggactcaatt 11339435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 11345169 - 11345117
Alignment:
Q  139 tttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaatt 191  Q
    |||||||| ||||||||| | || |||||| || |||||||||||||||||||    
T  11345169 tttgttatatggcaaatggaagagtttggatttcaagaatcttggactcaatt 11345117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 485
Target Start/End: Original strand, 27618727 - 27618791
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaa 485  Q
    ||||||||||||||||| || | ||||||||||||||||  | || || || |||||||||||||    
T  27618727 tatgttgaaagcttggtttcaatttcttgaaagtaagttcctatttgacgaattacttgtttgaa 27618791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 29157073 - 29157117
Alignment:
Q  162 atttggagttgaagaatcttggactcaattccttaaaattagtta 206  Q
    |||||||||||||||  | ||||||||| ||||||||||||||||    
T  29157073 atttggagttgaagagccatggactcaactccttaaaattagtta 29157117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 13806 - 13737
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 200  Q
    ||||| ||||| |||| ||||| ||||||||||| |||  ||| |||||||||||||| || ||||||||    
T  13806 aaaccgattttcttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaat 13737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 22641 - 22572
Alignment:
Q  131 aaacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactcaattccttaaaat 200  Q
    ||||| ||||| |||| ||||| ||||||||||| |||  ||| |||||||||||||| || ||||||||    
T  22641 aaaccgattttcttatatggcagatgaaggaattaggaaatgatgaatcttggactcagtttcttaaaat 22572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 132 - 188
Target Start/End: Original strand, 13385 - 13441
Alignment:
Q  132 aacccattttgttatctggcaaatgaaggaatttggagttgaagaatcttggactca 188  Q
    ||||||||||||| | ||| ||||||| || ||||||||| |||| |||||||||||    
T  13385 aacccattttgttttgtgggaaatgaaagagtttggagttcaagagtcttggactca 13441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 421 - 488
Target Start/End: Complemental strand, 16170 - 16105
Alignment:
Q  421 tatgttgaaagcttggtatcgacttcttgaaagtaagtttttgttcgatgatttacttgtttgaattt 488  Q
    ||||| ||||||||||| || |||| |||||||||||||  | ||  |||||||||||||||||||||    
T  16170 tatgtcgaaagcttggtttcaacttgttgaaagtaagttcctctt--atgatttacttgtttgaattt 16105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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