View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4162_high_1 (Length: 483)
Name: NF4162_high_1
Description: NF4162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4162_high_1 |
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Alignment Details
Target: chr3 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 18 - 332
Target Start/End: Complemental strand, 6027988 - 6027674
Alignment:
| Q |
18 |
atcaattgattgagcttgtgaaagaaatggctgtgttaggtggtaagttcaatttgggagatatgttatggtttgttaagaagcttgatttgcaagggtt |
117 |
Q |
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| T |
6027988 |
atcaattgattgagcttgtgaaagaaatggctgtgttaggtggtaagttcaatttgggagatatgttatggtttgttaagaagcttgatttgcaagggtt |
6027889 |
T |
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| Q |
118 |
tggtaaaaggctagagaatcttagaaataggtatgatgttataatagagaggatcatgaaggaacatgaagatacaaagaagaaaaacaaggaggaaata |
217 |
Q |
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| T |
6027888 |
tggtaaaaggctagagaatcttagaaataggtatgatgttataatagagaggatcatgaaggaacatgaagatacaaagaagaaaaacaaggaggaaata |
6027789 |
T |
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| Q |
218 |
aatagtaatggaattgaaacagtgagtgatttgcttgatattttacttgatatctatgctgatgaaaactcagaggttagattaactagagaaaatatca |
317 |
Q |
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| T |
6027788 |
aatagtaatggaattgaaacagtgagtgatttgcttgatattttacttgatatctatgctgatgaaaactcagaggttagattaactagagaaaatatca |
6027689 |
T |
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| Q |
318 |
aggccttcatcatgg |
332 |
Q |
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| T |
6027688 |
aggccttcatcatgg |
6027674 |
T |
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