View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4162_low_13 (Length: 246)
Name: NF4162_low_13
Description: NF4162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4162_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 44452250 - 44452466
Alignment:
| Q |
18 |
cattgatctattcacgcaaaataatacaaatctgaatcatatcccttctgtaactcattaacctcctatgtatacatgataaccctataactatctcatt |
117 |
Q |
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| T |
44452250 |
cattgatctattcacgcaaaataatacaaatctgaatcatatcccttctgtaactcattaacctcctatgtatacatgataaccctataactatctcatt |
44452349 |
T |
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| Q |
118 |
aattaataaattcctcaactaactccttcttatcctacatcctaacaaactccttatcctatattctaacagattcattggagcttccatttccaactgc |
217 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44452350 |
aattaataaattcctcaactaaatccttcttatcctacatcctaacaaactccttatcctatattctaacagattcattggagcttccatttccaactgc |
44452449 |
T |
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| Q |
218 |
tagtttgcactttacag |
234 |
Q |
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||||||||||||||||| |
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| T |
44452450 |
tagtttgcactttacag |
44452466 |
T |
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