View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4162_low_14 (Length: 239)
Name: NF4162_low_14
Description: NF4162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4162_low_14 |
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Alignment Details
Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31897881 - 31898102
Alignment:
| Q |
1 |
tgatgaaaaacggtgagagctgaattaggatttatatagagaaaggaaaataactaaatgagaaatgatggcattggcagagttgataatgnnnnnnnnn |
100 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
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| T |
31897881 |
tgatgaaaaacggtgagagctgaattagggtttatatagagaaaggaaaataattaaataagaaatgatggcattggcagagttgatgatgataatatat |
31897980 |
T |
|
| Q |
101 |
nnnnnnnnnnnctctcatgtatctagacatgtaatgggtttatgtacaataataatttggggtgtctactgttatggatgaatattgaatagctcccact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
31897981 |
aataatatatactctcatgtatctagacatgtaatgggtttatgtacaataataatttggggtgtgtactgttatggatgaatattgaatagctcccact |
31898080 |
T |
|
| Q |
201 |
tttaaggatatatgtgggtgct |
222 |
Q |
| |
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||| |||||||||||||||||| |
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|
| T |
31898081 |
tttgaggatatatgtgggtgct |
31898102 |
T |
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