View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4162_low_2 (Length: 467)
Name: NF4162_low_2
Description: NF4162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4162_low_2 |
 | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 400; Significance: 0; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 28 - 451
Target Start/End: Original strand, 4558474 - 4558897
Alignment:
| Q |
28 |
ggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
127 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558474 |
ggagttaaaccatccggaatagtctcaaagctaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
4558573 |
T |
|
| Q |
128 |
tgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagc |
227 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558574 |
tgtttacataggttatgtgaaatcctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagc |
4558673 |
T |
|
| Q |
228 |
atgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagctaagggaagccaatggtttaataaagataaagccaatgtttcttggattt |
327 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558674 |
atgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagctaagggaagccaatggtttaataaagataaagccaatgtttcttggattt |
4558773 |
T |
|
| Q |
328 |
gtgtaaaagaagataagagacaaaagacaaggaaagcaaactcaaattctaaggaatatgtaacacaataattgatacatacttgtcaagtcaccacttt |
427 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
4558774 |
gtgtaaaagaagataagagacaaaagtcaaggaaagcaaactcaaattctaagtaatatgtaacacaataattgatacatacttatcaagtcaccacttt |
4558873 |
T |
|
| Q |
428 |
ttgttatagaaggaaaacaatttt |
451 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
4558874 |
ttgttatagaaggaaaacaatttt |
4558897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 6 - 375
Target Start/End: Original strand, 4572293 - 4572660
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||| |||||||| || | |||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4572293 |
aacatcgccatcgccatccgttggagataaaccatctggaatactctcaaagttaaaattggtgaaaccatcaaaggcattttgacctcttgacttgagc |
4572392 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4572393 |
aaccgtttgtgattgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaaattttgctagttgcaacaatggattgatatggccttgaa |
4572492 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagctaagggaagccaatggtttaataaagat |
305 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||||||| |
|
|
| T |
4572493 |
ctggatatgggattaacacagcatgtggttttttatcactcattattgagtttttgtgtttgaatgttgagctaa-ggaaaccaatgttttaataaagat |
4572591 |
T |
|
| Q |
306 |
aaagccaatgtttcttggatttgtgtaaaagaagataagagacaaaagacaaggaaagcaaactcaaatt |
375 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
4572592 |
aaatccaatgtttcttggatttgtggaaaagaagat-agagacaaaagacaaggaaagcaaaatcaaatt |
4572660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 6 - 309
Target Start/End: Original strand, 4586959 - 4587260
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| || || | |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||| ||| |
|
|
| T |
4586959 |
aacatcaccatcaccatccgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaatcatcaaaggcatttggagctcttgacttaagc |
4587058 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4587059 |
aaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaatcctcgaaggtgaagaagtttagctagtttcaacaatggattgatatggccttgaa |
4587158 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgagctaagggaagccaatggtttaataaagat |
305 |
Q |
| |
|
||||| |||| |||||||||||||| |||||| ||||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||| |||| |
|
|
| T |
4587159 |
ctggagatgggattaacacagcatgaggttttgaatcactcatttctgag--tttgtgtttgaattttgagcaaagggaagccaatggtttaatagagat |
4587256 |
T |
|
| Q |
306 |
aaag |
309 |
Q |
| |
|
|||| |
|
|
| T |
4587257 |
aaag |
4587260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 4517667 - 4517894
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
4517667 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttgatttgagc |
4517766 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||| ||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4517767 |
aaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaagatgaagaagttttgctagttttaacaacggattgatatggccttgaa |
4517866 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
|||||||||| ||| ||| |||||||| |
|
|
| T |
4517867 |
gtggatatggagttatcactgcatgtgg |
4517894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 3173330 - 3173561
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||| || | ||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
3173330 |
aacatcaccatcaccttccattgaagttaaaccatctggtatagtctcaaagttaaaatcattgaaaccatcaaaggcatttggaccctttgatttgagc |
3173429 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
3173430 |
aaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtgaagtagttttgctagtttcaacaatgcattgatatggccttgaa |
3173529 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||||||| ||||||| |||||||||||| |
|
|
| T |
3173530 |
ctggatatggagttaacactgcatgtggtttt |
3173561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 4612523 - 4612253
Alignment:
| Q |
2 |
catcaacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgactt |
101 |
Q |
| |
|
||||| |||||||||||||||| | | || || ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
4612523 |
catcaccatcaccatcgccttcgtttgaaggtagaccatctggtatagcctcaaaggtaaaatcagtgaaaccaacaaaggcatttggacctcttgattt |
4612424 |
T |
|
| Q |
102 |
gagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggcct |
201 |
Q |
| |
|
|||||| |||||||| |||||||| ||||| || | ||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
4612423 |
gagcaagcgtttgtgattgtattcggtgttgacgaatgttatgtgaaagcctctaaggtgaagaagttttgctagtttgattaatggattgatatggcct |
4612324 |
T |
|
| Q |
202 |
tgaactggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttg |
274 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||| |
|
|
| T |
4612323 |
tgaactggatatggaattaacactgcatgtggttttgaatcactcatttctgag--tttgtgtttgaatgttg |
4612253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 4581341 - 4581578
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
4581341 |
aacatcactatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcggtgaaaccatcaaacgcttttggacctcttgatttgagc |
4581440 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| | | |||||| ||||||| ||||||| |
|
|
| T |
4581441 |
aagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtgttattaatggagtgatatgtccttgaa |
4581540 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttatca |
243 |
Q |
| |
|
|||||||||||| ||||| |||||||| ||||||||| |
|
|
| T |
4581541 |
gtggatatggaatcaacactgcatgtggctttttatca |
4581578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 4488998 - 4488771
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||| ||||| || ||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4488998 |
aacatcgccatcaccatctgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaaccatcaaaggcatttggacctcttgatttgagc |
4488899 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4488898 |
aagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagtagttttcctagtttcaacaatgcattgatatggccttgaa |
4488799 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
||||| |||| ||||||| |||||||| |
|
|
| T |
4488798 |
ctggaaatggtgttaacactgcatgtgg |
4488771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 4507238 - 4507469
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| || || || ||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4507238 |
aacatcaccatcaccatccattggagttaaaccatctggtagagtctcaaagttaaaatcagtgaaaccatcaaaggcattttcacctcttgatttgagc |
4507337 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||| ||||||||||||| |||| |||||||||||| || |||||||| |||||||||||||||||||||||| |
|
|
| T |
4507338 |
aagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctcgaaggtgaagaagcttagctagtttgaacaatggattgatatggccttgag |
4507437 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
|||||||||||| |||||||||||||||||| |
|
|
| T |
4507438 |
ttggatatggaatcaacacagcatgtggtttt |
4507469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 4575804 - 4576015
Alignment:
| Q |
28 |
ggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
127 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
4575804 |
ggagttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcag |
4575903 |
T |
|
| Q |
128 |
tgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagc |
227 |
Q |
| |
|
|||| ||| ||||||||||||| |||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||| || |
|
|
| T |
4575904 |
tgttaacaaaggttatgtgaaagcctctaaggtgaagcagttttgctattttcaacaatgcattgatatggccttgaactggaaatggagttaacactgc |
4576003 |
T |
|
| Q |
228 |
atgtggtttttt |
239 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4576004 |
atgtggcttttt |
4576015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 4618628 - 4618859
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||| || || ||||||||||||||||| |||||||| |||| || |||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
4618628 |
aacatcaccatcaccttccattggtgttaaaccatctggaatgctctcaaagttaaagtccgtgaaaccatcaaaagcctttggacctcttgatttgagc |
4618727 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4618728 |
aagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaa |
4618827 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||||||||| | |||| ||||||||||| |
|
|
| T |
4618828 |
ctggatatggaatcatcacaacatgtggtttt |
4618859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 4627477 - 4627704
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||| ||||| ||||||| || |||||||||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4627477 |
aacatcgccatcaccttctagtggtgttaaaccatctggtatggtctcaaaggtaaaatcatcgaaaccatcaaaggcattttcacctcttgatttgagc |
4627576 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4627577 |
aaacgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagtaattttgctagtatcaacaatggattgatatggccttgaa |
4627676 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
|||| ||||||| |||||||||||||| |
|
|
| T |
4627677 |
gtggaaatggaatcaacacagcatgtgg |
4627704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 11 - 237
Target Start/End: Complemental strand, 4513775 - 4513549
Alignment:
| Q |
11 |
caccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccg |
110 |
Q |
| |
|
|||||||||| || || |||||||||||||| ||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||| |||||||| || |
|
|
| T |
4513775 |
caccatcgccatccattggagttaaaccatcaggaatagtctcaaagcgaaaatcggtgaaaccatcaaaagcattaggacctcttgatttgagcaaacg |
4513676 |
T |
|
| Q |
111 |
tttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactgga |
210 |
Q |
| |
|
|||||| |||||||| ||||| ||| ||||||||||||| |||||||||||||| |||||||||| | | |||| |||||||||||||||||||| |||| |
|
|
| T |
4513675 |
tttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaaggtgaagtagttttgctaatctgaacattggattgatatggccttgaagtgga |
4513576 |
T |
|
| Q |
211 |
tatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
4513575 |
tatggaatcaacacagcatgtggtttt |
4513549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 9 - 216
Target Start/End: Original strand, 4569404 - 4569607
Alignment:
| Q |
9 |
atcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaac |
108 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
4569404 |
atcaccataaccttctgtcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttgatttgagcaaa |
4569503 |
T |
|
| Q |
109 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactg |
208 |
Q |
| |
|
||||||| | ||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
4569504 |
tgtttgtgat----ttcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagttttgctagtttcaataatggattgatatggccttgaagtg |
4569599 |
T |
|
| Q |
209 |
gatatgga |
216 |
Q |
| |
|
|||||||| |
|
|
| T |
4569600 |
gatatgga |
4569607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 241
Target Start/End: Complemental strand, 4258977 - 4258742
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||| ||||| ||||| | ||||| | ||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||| |
|
|
| T |
4258977 |
aacatcgccatcaccttccactggagtcagaccatcttgaatagtctcaaaggtaaaatcaatgaaaccatcaacggcattttcacctcttgatttgagc |
4258878 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| || ||||||||||| ||| ||||||||||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||||||| |
|
|
| T |
4258877 |
aaacgtttgtgattatattcagtgttgacaaaggttatgtgaaaacctttaaagtgaagaagcttagctagtttgaacaatggattgatatggccttgag |
4258778 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttat |
241 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
4258777 |
ctggatatggaatcaacacagcatgtggctttttat |
4258742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 6 - 241
Target Start/End: Original strand, 4623634 - 4623869
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||| || || ||||||||||||||||| ||||||||| |||| || ||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
4623634 |
aacatcaccatcaccttccattggtgttaaaccatctggaatggtctcaaagttaaagtccgtgaaaccatcaaaggcctttggacctcttgatttgagc |
4623733 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| |||| || ||||||||||||| ||| |||||| |||||| ||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
4623734 |
aagcgtttgtgattgtattcggtgtgaccaaaggttatgtgaaagcctttaaggtaaagaagctttgctagtttgaacaatggattgatatgaccttgaa |
4623833 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttat |
241 |
Q |
| |
|
||||||||| ||| |||||||||||||| ||||||| |
|
|
| T |
4623834 |
ctggatatgcaatcaacacagcatgtggctttttat |
4623869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 14 - 239
Target Start/End: Original strand, 4482200 - 4482425
Alignment:
| Q |
14 |
catcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgttt |
113 |
Q |
| |
|
|||| ||||| || ||||||||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||| |
|
|
| T |
4482200 |
catcaccttcaattggagttaaaccatctggtatcgtttcaaaggtaaaatcagtgaaaccatcaaaggcttttggaccccttgattttagcaaacgttt |
4482299 |
T |
|
| Q |
114 |
gtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatat |
213 |
Q |
| |
|
||| |||||||| ||||| ||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||| |||||||||||||||| ||||| || |
|
|
| T |
4482300 |
gtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagtagttttcctattttcaacaatgcattgatatggccttgagctggaaat |
4482399 |
T |
|
| Q |
214 |
ggaattaacacagcatgtggtttttt |
239 |
Q |
| |
|
||| | ||||| |||||||||||||| |
|
|
| T |
4482400 |
ggagtcaacactgcatgtggtttttt |
4482425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 4594337 - 4594568
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||| || || |||| ||||||||| || || |||||| ||||| ||| ||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
4594337 |
aacatcaccatcaccttccattggtgttagaccatctggtatggtttcaaagctaaaaccagggaaaccatctaaggcatttggacctcttgatttgagc |
4594436 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| ||||| || |||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |
|
|
| T |
4594437 |
aaacgtttatgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatgtccttgaa |
4594536 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |
|
|
| T |
4594537 |
gtggagctggaatcaacacagcatgtggtttt |
4594568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 14 - 237
Target Start/End: Original strand, 4603445 - 4603668
Alignment:
| Q |
14 |
catcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgttt |
113 |
Q |
| |
|
|||| ||||| ||||| |||| |||||||| || || |||||| ||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |
|
|
| T |
4603445 |
catcaccttccatcggtgttagtccatctgggattgtttcaaagctaaaatcagtgaagccgtctaaggcattaggacctcttgatttgagcaaacgttt |
4603544 |
T |
|
| Q |
114 |
gtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatat |
213 |
Q |
| |
|
||| |||||||| ||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
4603545 |
gtgattgtattcggtgttgacaaaggttatgtgaaatcctctaaggtgaaatagttttgctagtttcaacattggattgatatggccttgaagtggatat |
4603644 |
T |
|
| Q |
214 |
ggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||| |||||||||||| ||||| |
|
|
| T |
4603645 |
ggaatcaacacagcatgttgtttt |
4603668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 8 - 233
Target Start/End: Complemental strand, 4265856 - 4265631
Alignment:
| Q |
8 |
catcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaa |
107 |
Q |
| |
|
||||||||| |||||| || ||||||| ||||||||| || |||||||| |||| ||| |||||||||||| | ||||||||||||||| |||||||| |
|
|
| T |
4265856 |
catcaccattgccttccattggagttagaccatctggtatggtctcaaacttaaagtcactgaaaccatcaagagaatttggacctcttgatttgagcaa |
4265757 |
T |
|
| Q |
108 |
ccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaact |
207 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||| || ||||||| ||||||||||||||||| | |
|
|
| T |
4265756 |
gcgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttcctagattgaacaatgcattgatatggccttgaaat |
4265657 |
T |
|
| Q |
208 |
ggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
||| |||||| |||||||||||||| |
|
|
| T |
4265656 |
ggagctggaatcaacacagcatgtgg |
4265631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 4565356 - 4565587
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||||||||| |||| ||||||||| || || |||||| |||| || | ||||||| |||||||||||||||||||| || ||| |
|
|
| T |
4565356 |
aacatcaccatcaccttctatcggtgttagaccatctggtatggtttcaaagcaaaaaccacgggaaccatctaaggcatttggacctcttgattttagc |
4565455 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| ||||| || |||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |
|
|
| T |
4565456 |
aatcgtttatgattgtattcagtgttgacaaaggttatatgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatgtccttgaa |
4565555 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
|||| |||||| |||||||||||||||||| |
|
|
| T |
4565556 |
atggagctggaatcaacacagcatgtggtttt |
4565587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 6 - 276
Target Start/End: Original strand, 4599490 - 4599758
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| || ||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| | | ||| ||||||||||| |||||| |
|
|
| T |
4599490 |
aacatcaccatcaccatctattggagttaaaccatctggaatagtctcgaaggaaaaatcagtgaaaccattacgagaattaggacctcttgatttgagc |
4599589 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| ||||| || ||||| || ||||||||| ||| |||||||||||||||| ||||||||||| | ||| ||||||||| ||||||| |
|
|
| T |
4599590 |
aagcgtttgtgattgtactcggtgttcacgaaggttatgtaaaatcctctaaggtgaagaatctttgctagtttgattaatagattgatatttccttgaa |
4599689 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttatcactcatttttgagtttttgtgtttgaatgttgag |
276 |
Q |
| |
|
||| ||||||| || || |||||| |||||||| ||||||||| |||| ||||||||||||||||||| |
|
|
| T |
4599690 |
ttggtaatggaatcaatactgcatgtagttttttaccactcatttgtgag--tttgtgtttgaatgttgag |
4599758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 221
Target Start/End: Original strand, 4562011 - 4562204
Alignment:
| Q |
28 |
ggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
127 |
Q |
| |
|
||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||| ||||||||| || ||||| |||||||| |||||||||| |
|
|
| T |
4562011 |
ggagttaaaccatctggtatagtctcaaagttaaagtcagtgaaaccatcaaaggcattttcacctcttga-tttagcaaacgtttgtgattgtattcag |
4562109 |
T |
|
| Q |
128 |
tgtttacatagg-ttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaa |
221 |
Q |
| |
|
|||| ||| ||| |||||||||| ||||| |||||||| |||||||||| ||||||||||| ||||||||| |||||||||||| ||||| |||| |
|
|
| T |
4562110 |
tgttaacaaaggtttatgtgaaagcctcttaggtgaagcagttttgctattttcaacaatgcattgatatgaccttgaactggaaatggagttaa |
4562204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 34 - 233
Target Start/End: Original strand, 4462562 - 4462761
Alignment:
| Q |
34 |
aaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgttta |
133 |
Q |
| |
|
||||||| |||||| ||||||||| |||| |||||||||||||| | | ||| ||||||||||| |||||||| | ||||| |||||||||||||| | |
|
|
| T |
4462562 |
aaaccatttggaatggtctcaaagttaaagtcagtgaaaccatctagagaattaggacctcttgaattgagcaagcaattgtgattgtattcagtgttga |
4462661 |
T |
|
| Q |
134 |
cataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||| ||||||| |||||||||||||| |
|
|
| T |
4462662 |
caaaggttatgtgaaaacctctaaggtgaagtagttttcctagtttcaacaatgcattgatatggccttgggatggacatggaatcaacacagcatgtgg |
4462761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 34 - 233
Target Start/End: Original strand, 4471269 - 4471468
Alignment:
| Q |
34 |
aaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgttta |
133 |
Q |
| |
|
||||||| |||||| ||||||||| |||| |||||||||||||||| | || ||||||||||| |||||||| |||||| |||||||||||||| | |
|
|
| T |
4471269 |
aaaccatttggaatggtctcaaagttaaagtcagtgaaaccatcaagagaatcaggacctcttgaattgagcaaggctttgtgattgtattcagtgttga |
4471368 |
T |
|
| Q |
134 |
cataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
|| | ||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| ||||||| || ||||||||||| |
|
|
| T |
4471369 |
caaacgttatgtgaaagcctctaaggtgaagaagctttgctagtttcaacaatgcattgatatggccttgagctggacatggaatcaatacagcatgtgg |
4471468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 6 - 157
Target Start/End: Complemental strand, 4503094 - 4502943
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||| | |||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4503094 |
aacatcaccatcaccttccaccggagttaaaccatctggtatggtctcaaaggtaaaatcattgaaaccatcaaaggcatttggacctcttgatttgagc |
4502995 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaa |
157 |
Q |
| |
|
|| |||||||| |||||||| ||||| ||| ||||||||||||| ||||||| |
|
|
| T |
4502994 |
aagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaa |
4502943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 4255550 - 4255395
Alignment:
| Q |
66 |
agtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaaga |
165 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||| | |||||| |||||||| |||||||| ||||| ||| || ||| |||| ||||| |
|
|
| T |
4255550 |
agtggaaccatcaaaggcttttggacctcttgattcgagcaagcgtttgtgattgtattcggtgttgacaaag------------cctttaagatgaagt |
4255463 |
T |
|
| Q |
166 |
agttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtgg |
233 |
Q |
| |
|
| |||||||||||| || ||| ||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4255462 |
aattttgctagtttgaataatagattgatatggccttgaactggatatggaatcaacacagcatgtgg |
4255395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 4497899 - 4497813
Alignment:
| Q |
153 |
tctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttttt |
239 |
Q |
| |
|
|||||||||||| | |||| |||||||||||||||||||||||||||||| || |||| ||||| ||||||| |||||||| ||||| |
|
|
| T |
4497899 |
tctaaggtgaagtaattttcctagtttcaacaatggattgatatggccttaaattggaaatggagttaacactgcatgtggcttttt |
4497813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 4298299 - 4298174
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||| ||||| ||||| | ||||| | |||||||||||||||||||||| |||| | |||||||||||||| || |||||||| ||||| | |||| |
|
|
| T |
4298299 |
aacatctccatcaccttccgttggagtcagaccatctggaatagtctcaaagctaaagttggtgaaaccatcaaaagcttttggaccccttgattcgagc |
4298200 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtt |
131 |
Q |
| |
|
| ||||||| |||||||| ||||| |
|
|
| T |
4298199 |
aggtgtttgtgattgtattcggtgtt |
4298174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 433
Target Start/End: Original strand, 4572706 - 4572749
Alignment:
| Q |
390 |
acacaataattgatacatacttgtcaagtcaccactttttgtta |
433 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
4572706 |
acacaataattgatgcatactagtcaagtcaccactttttgtta |
4572749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 4493401 - 4493463
Alignment:
| Q |
175 |
agtttcaacaatggattgatatggccttgaactggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||| || || ||||||||| |||||| ||||| ||||||| ||||| |||||||||||| |
|
|
| T |
4493401 |
agtttcagcattgcattgatatgaccttgagctggaaatggaatcaacactgcatgtggtttt |
4493463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 136; Significance: 9e-71; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 2173 - 2384
Alignment:
| Q |
28 |
ggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
127 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| || |||||||||| |
|
|
| T |
2173 |
ggagttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcag |
2272 |
T |
|
| Q |
128 |
tgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagc |
227 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2273 |
tgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaataatggattgatatggccttgaactggatatggaatcaacacagc |
2372 |
T |
|
| Q |
228 |
atgtggtttttt |
239 |
Q |
| |
|
|||||||||||| |
|
|
| T |
2373 |
atgtggtttttt |
2384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 136; Significance: 9e-71; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 1085 - 1316
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||||| || |||| ||||||||| || || |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
1085 |
aacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgatttgagc |
1184 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1185 |
aaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggccttgag |
1284 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| |
|
|
| T |
1285 |
ctggatatggaatgaacacagcatgtgatttt |
1316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 136; Significance: 9e-71; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 1675848 - 1676079
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||||| || |||| ||||||||| || || |||||| ||||||||||||||||||| |||||| ||||||||||||| |||||| |
|
|
| T |
1675848 |
aacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgatttgagc |
1675947 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1675948 |
aaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggccttgag |
1676047 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| |
|
|
| T |
1676048 |
ctggatatggaatgaacacagcatgtgatttt |
1676079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 20862587 - 20862378
Alignment:
| Q |
30 |
agttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtg |
129 |
Q |
| |
|
|||| |||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
20862587 |
agttgaaccatctggaacggtctcaaagcgaaagtcagtgaaaccatcaaagggtattggacccattgacttaagcaagcgtttgtgattgtattcagta |
20862488 |
T |
|
| Q |
130 |
tttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagcat |
229 |
Q |
| |
|
|| ||| | ||||||| ||| |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| |||||||||| ||||||| |||| |
|
|
| T |
20862487 |
ttgacaaatgttatgtaaaagcctctaaggtgaagtagttttgctagttttaacattggattgatatgaccttgaagtggatatggagttaacactgcat |
20862388 |
T |
|
| Q |
230 |
gtggtttttt |
239 |
Q |
| |
|
|||||||||| |
|
|
| T |
20862387 |
gtggtttttt |
20862378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 136; Significance: 9e-71; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 1282760 - 1282991
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
|||||||||||| ||||||| | |||| ||||||||| || || |||||| ||||||||||||||||||| | |||||||||||||||||| |||||| |
|
|
| T |
1282760 |
aacatcaccatcaccttctagtgatgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatctagggcatttggacctcttgatttgagc |
1282859 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| ||||||||||| || ||| ||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1282860 |
aagcgtttgtgattgtattcagtattaacaaaggttatgtaaaagcctctaaggtgaagtagttttgctagtttgaacaatggattgatatggccttgag |
1282959 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggtttt |
237 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |
|
|
| T |
1282960 |
ctggatatggaatcaacacagcatgtggtttt |
1282991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Original strand, 35776276 - 35776320
Alignment:
| Q |
109 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacct |
153 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||||||||| |
|
|
| T |
35776276 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacct |
35776320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 35842083 - 35842126
Alignment:
| Q |
109 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
152 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35842083 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35842126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 35854591 - 35854634
Alignment:
| Q |
109 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
152 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35854591 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35854634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 35869200 - 35869243
Alignment:
| Q |
109 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
152 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35869200 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35869243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 28 - 237
Target Start/End: Complemental strand, 2230 - 2021
Alignment:
| Q |
28 |
ggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcag |
127 |
Q |
| |
|
|||||||||||||| ||||||||||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| || |||||||||| |
|
|
| T |
2230 |
ggagttaaaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcag |
2131 |
T |
|
| Q |
128 |
tgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaactggatatggaattaacacagc |
227 |
Q |
| |
|
|||| ||| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| | |||| | |
|
|
| T |
2130 |
tgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaactggatatggaatcatcacaac |
2031 |
T |
|
| Q |
228 |
atgtggtttt |
237 |
Q |
| |
|
|||||||||| |
|
|
| T |
2030 |
atgtggtttt |
2021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 114; Significance: 1e-57; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 3088072 - 3088309
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
||||||||||| ||||| || ||||||| ||||||| | |||||||||||| |||||||||||||||||||| | ||| | ||||||||| || ||| |
|
|
| T |
3088072 |
aacatcaccattaccttccattggagttagaccatcttggatagtctcaaagacaaaatcagtgaaaccatcaagagaattagaacctcttgatttaagc |
3088171 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| || ||||| |||||||| || || ||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |
|
|
| T |
3088172 |
aaacggttgtgattgtattcggtattgacaaaggttatgtgaaagcctttaaggtgaagaagttttgctagttttaacaatggatttatatgaccttgaa |
3088271 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatgtggttttttatca |
243 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
3088272 |
gtggatatggaatcaacacagcatgtggctttttatca |
3088309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 24104422 - 24104646
Alignment:
| Q |
6 |
aacatcaccatcgccttctatcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagc |
105 |
Q |
| |
|
||||||||||| |||||| || ||||||| ||||||||| || ||||||||| |||| ||| |||||||||||| | ||| ||| ||||||| | |||| |
|
|
| T |
24104422 |
aacatcaccattgccttccattggagttagaccatctggtatggtctcaaagttaaagtcattgaaaccatcaagagaattaggatctcttgattcgagc |
24104521 |
T |
|
| Q |
106 |
aaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
205 |
Q |
| |
|
|| |||||||| |||||||| ||||| || ||||||||||||| ||||||||||||||||| ||| ||||||| ||||||| ||||||||| ||||||| |
|
|
| T |
24104522 |
aagcgtttgtgattgtattcggtgttcacgaaggttatgtgaaagcctctaaggtgaagaagctttcctagtttgaacaatgcattgatatgaccttgaa |
24104621 |
T |
|
| Q |
206 |
ctggatatggaattaacacagcatg |
230 |
Q |
| |
|
|||| |||||| ||||||||||| |
|
|
| T |
24104622 |
atggagctggaatcaacacagcatg |
24104646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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