View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4163_high_27 (Length: 251)

Name: NF4163_high_27
Description: NF4163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4163_high_27
NF4163_high_27
[»] chr3 (12 HSPs)
chr3 (32-246)||(32996799-32997015)
chr3 (133-201)||(5354405-5354473)
chr3 (32-83)||(17227946-17227997)
chr3 (31-66)||(38742189-38742224)
chr3 (33-79)||(41755499-41755545)
chr3 (32-81)||(21812600-21812649)
chr3 (32-81)||(45242987-45243036)
chr3 (32-65)||(46721974-46722007)
chr3 (33-81)||(36750437-36750485)
chr3 (33-81)||(37105077-37105125)
chr3 (33-81)||(44686255-44686302)
chr3 (33-81)||(49757182-49757230)
[»] chr2 (7 HSPs)
chr2 (139-246)||(24741631-24741738)
chr2 (33-114)||(24741772-24741853)
chr2 (33-81)||(4479702-4479750)
chr2 (33-81)||(14573261-14573309)
chr2 (33-81)||(14573999-14574047)
chr2 (33-81)||(21471017-21471065)
chr2 (33-81)||(21471954-21472002)
[»] chr8 (8 HSPs)
chr8 (133-216)||(25876629-25876712)
chr8 (33-216)||(7424421-7424610)
chr8 (33-117)||(25876521-25876605)
chr8 (31-83)||(1365827-1365879)
chr8 (33-81)||(34992264-34992312)
chr8 (33-83)||(61454-61504)
chr8 (32-81)||(27918047-27918096)
chr8 (33-81)||(41859310-41859358)
[»] chr4 (14 HSPs)
chr4 (134-216)||(42544596-42544678)
chr4 (33-117)||(42544488-42544572)
chr4 (31-81)||(21165445-21165495)
chr4 (31-81)||(38694954-38695004)
chr4 (32-81)||(25371545-25371594)
chr4 (33-66)||(52757813-52757846)
chr4 (33-81)||(37275088-37275136)
chr4 (38-81)||(3847891-3847934)
chr4 (34-81)||(36864818-36864865)
chr4 (33-83)||(47198605-47198655)
chr4 (33-83)||(55160065-55160114)
chr4 (33-81)||(11417687-11417735)
chr4 (33-81)||(26611283-26611331)
chr4 (33-81)||(29651332-29651380)
[»] chr6 (11 HSPs)
chr6 (31-81)||(15083318-15083368)
chr6 (33-81)||(3543063-3543111)
chr6 (32-112)||(33078283-33078363)
chr6 (35-81)||(3542816-3542862)
chr6 (32-114)||(24551566-24551648)
chr6 (133-186)||(24551489-24551541)
chr6 (32-81)||(33480628-33480677)
chr6 (33-81)||(7159341-7159389)
chr6 (33-81)||(7193338-7193386)
chr6 (33-81)||(7532440-7532488)
chr6 (29-81)||(22579931-22579983)
[»] chr1 (8 HSPs)
chr1 (32-81)||(49610705-49610754)
chr1 (33-81)||(193850-193898)
chr1 (32-81)||(43737728-43737777)
chr1 (33-81)||(1012547-1012595)
chr1 (33-81)||(16270207-16270255)
chr1 (33-81)||(23440865-23440913)
chr1 (33-81)||(51974437-51974485)
chr1 (33-81)||(51987827-51987875)
[»] scaffold0041 (1 HSPs)
scaffold0041 (31-81)||(27575-27625)
[»] chr5 (6 HSPs)
chr5 (39-81)||(4607470-4607512)
chr5 (33-81)||(8204120-8204168)
chr5 (33-81)||(12190158-12190206)
chr5 (33-81)||(15184017-15184065)
chr5 (138-201)||(31147477-31147538)
chr5 (32-80)||(39950403-39950451)
[»] scaffold0311 (1 HSPs)
scaffold0311 (33-81)||(160-208)
[»] chr7 (8 HSPs)
chr7 (33-81)||(668179-668227)
chr7 (33-81)||(17145622-17145670)
chr7 (33-81)||(37468910-37468958)
chr7 (33-81)||(37469005-37469053)
chr7 (33-81)||(37864307-37864355)
chr7 (33-81)||(38778854-38778902)
chr7 (33-81)||(38779563-38779611)
chr7 (33-81)||(41194513-41194561)


Alignment Details
Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 32 - 246
Target Start/End: Complemental strand, 32997015 - 32996799
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctc-accatgagaaagtctctttaccaaggacacctgtcgattttgaacttgcnnnnnnnnnnnnn 130  Q
    ||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||| ||||| ||||||||||||                 
T  32997015 tggtgccatttaatttgagaaagaagacttttttttccaccatgggaaagtctctttaccaaggacacgtgtcggttttgaacttgcaaaaaaaaaaaaa 32996916  T
Q  131 nn-ctcaatttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccacaaaactgattgattaaaacatgaaattat 229  Q
       |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  32996915 aaactcagtttattattttaatgttatttccaagcttactactgcacctccccatttctccattacaccacaaaactgattgattaaaacatgaaattat 32996816  T
Q  230 attattcttcttctcac 246  Q
    ||| |||||||||||||    
T  32996815 attcttcttcttctcac 32996799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 5354473 - 5354405
Alignment:
Q  133 ctcaatttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccaca 201  Q
    |||||||||||||||||||||||| |  |||||||||  |||||||||| |||| | || |||||||||    
T  5354473 ctcaatttattattttaatgttgtgtttaagcttactgttgcacctccctatttcttcagtacaccaca 5354405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 17227997 - 17227946
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtct 83  Q
    ||||| ||||||||||||||||| |||||| |||| |||||||| |||||||    
T  17227997 tggtggcatttaatttgggaaaggagacttctttcccaccatgaaaaagtct 17227946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 38742224 - 38742189
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttc 66  Q
    ||||||||||||||| ||||||||||||||||||||    
T  38742224 ttggtgccatttaatctgggaaagaagacttttttc 38742189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 79
Target Start/End: Original strand, 41755499 - 41755545
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaa 79  Q
    |||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  41755499 ggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaa 41755545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 21812649 - 21812600
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||| ||||||||||||||| |||||||||| ||| ||||| |||||    
T  21812649 tggtgccgtttaatttgggaaaggagacttttttttcatcatgaaaaagt 21812600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 45243036 - 45242987
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||||||||||||| || |||  ||||||| ||||||    
T  45243036 tggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagt 45242987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 65
Target Start/End: Complemental strand, 46722007 - 46721974
Alignment:
Q  32 tggtgccatttaatttgggaaagaagactttttt 65  Q
    ||||| ||||||||||||||||||||||||||||    
T  46722007 tggtgtcatttaatttgggaaagaagactttttt 46721974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 36750485 - 36750437
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  36750485 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 36750437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 37105125 - 37105077
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||| ||||||||||||||  ||||||||||| ||||||| ||||||    
T  37105125 ggtgccgtttaatttgggaaacgagacttttttcccaccatgggaaagt 37105077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 44686255 - 44686302
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  44686255 ggtgccatttaatttggaaaaggagagtttttt-tcaccatgagaaagt 44686302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 49757230 - 49757182
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||| ||||||||||||||| |||||||||||  |||||| ||||||    
T  49757230 ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagt 49757182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 9e-45; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 24741738 - 24741631
Alignment:
Q  139 ttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccacaaaactgattgattaaaacatgaaattatattattctt 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||| |||||    
T  24741738 ttattattttaatgttgtttccaagcttactactgcacctccccatttcttcagtacaccacaaaactgattgattaaaacatgaaattatattcttctt 24741639  T
Q  239 cttctcac 246  Q
    ||||||||    
T  24741638 cttctcac 24741631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 24741853 - 24741772
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaact 114  Q
    |||||| ||||||||||||||||||||||||||| |||||||  |||  ||||||||||||||||||||||  |||||||||    
T  24741853 ggtgccgtttaatttgggaaagaagacttttttcccaccatggaaaaacctctttaccaaggacacctgtcagttttgaact 24741772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 4479750 - 4479702
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||||||||||| ||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagt 4479702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 14573261 - 14573309
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 14573309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 14574047 - 14573999
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| |||||| |||||||    
T  14574047 ggtgccatttaatttgggaaaggagagttctttcccaccataagaaagt 14573999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 21471017 - 21471065
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  21471017 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 21471065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 21472002 - 21471954
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 21471954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 25876629 - 25876712
Alignment:
Q  133 ctcaatttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccacaaaactgattgattaa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  25876629 ctcaatttattattttaatgttgtttccaagcttactactgcacctccccatttccccattacaccacaaaactgattgattaa 25876712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 216
Target Start/End: Complemental strand, 7424610 - 7424421
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaacttgcnnnnnnnnnnnnnnn 132  Q
    ||||| |||||||||| ||||||||||||||||  ||||||| ||||||||||||||||||||||| ||||| |||| |||||||                   
T  7424610 ggtgcaatttaatttgagaaagaagactttttttccaccatgggaaagtctctttaccaaggacacttgtcggtttttaacttgcaaaaaaaaaaaacaa 7424511  T
Q  133 ------ctcaatttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccacaaaactgattgattaa 216  Q
          |||||||||||||||||||||| ||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||    
T  7424510 aaaaaactcaatttattattttaatgttctttccaaacttactactgcacctccccatttccgcattacaccacaaaactgattgattaa 7424421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 25876521 - 25876605
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaacttgc 117  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||| ||||| || ||||| |||| |||||||    
T  25876521 ggtgccatttaatttgggaaagaagatttttttcccaccatgggaaagtctctttacgaaggatacttgtcggtttttaacttgc 25876605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 1365827 - 1365879
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtct 83  Q
    |||||| ||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  1365827 ttggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagtct 1365879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 34992312 - 34992264
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  34992312 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 34992264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 61454 - 61504
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtct 83  Q
    |||| ||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  61454 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagtct 61504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 27918096 - 27918047
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||| ||||||||||||||  ||||||||||| ||||||| ||||||    
T  27918096 tggtgccgtttaatttgggaaatgagacttttttcccaccatgggaaagt 27918047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41859310 - 41859358
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  41859310 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 41859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 42544596 - 42544678
Alignment:
Q  134 tcaatttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccacaaaactgattgattaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  42544596 tcaatttattattttaatgttgtttccaagcttactactgcacctccccatttccccattacaccataaaactgattgattaa 42544678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 42544488 - 42544572
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaacttgc 117  Q
    |||||||||||||||||||||||||||||||||| |||||||  |||||||||||| ||||||||| ||||| |||| |||||||    
T  42544488 ggtgccatttaatttgggaaagaagacttttttcccaccatggaaaagtctctttatcaaggacacttgtcggtttttaacttgc 42544572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Original strand, 21165445 - 21165495
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||||||| | || |||| ||||||||||||||    
T  21165445 ttggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagt 21165495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 38695004 - 38694954
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  38695004 ttggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagt 38694954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 25371594 - 25371545
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||| ||||||||||||||||| |||||| |||| ||||||||||||||    
T  25371594 tggtgacatttaatttgggaaaggagacttctttcccaccatgagaaagt 25371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 52757813 - 52757846
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttc 66  Q
    ||||||||||||||||||||||||||||||||||    
T  52757813 ggtgccatttaatttgggaaagaagacttttttc 52757846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 37275088 - 37275136
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||| ||||||||||||||| |||||| |||| ||||||||||||||    
T  37275088 ggtgccgtttaatttgggaaaggagacttctttcccaccatgagaaagt 37275136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 3847891 - 3847934
Alignment:
Q  38 catttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||    
T  3847891 catttaatttgggaaaggagacttttttcccaccatgggaaagt 3847934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 81
Target Start/End: Original strand, 36864818 - 36864865
Alignment:
Q  34 gtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||| |||||||||||||||| ||| || |||||||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagt 36864865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Original strand, 47198605 - 47198655
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtct 83  Q
    |||| ||||||||||||||||| |||||| |||| ||||||| ||||||||    
T  47198605 ggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagtct 47198655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 55160114 - 55160065
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtct 83  Q
    |||| ||||||||||||||||| |||| |||||||||||||| ||||||||    
T  55160114 ggtggcatttaatttgggaaaggagac-tttttctcaccatgggaaagtct 55160065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 11417687 - 11417735
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  11417687 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 11417735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 26611331 - 26611283
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||| ||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  26611331 ggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagt 26611283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 29651380 - 29651332
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  29651380 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 29651332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000009; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 15083368 - 15083318
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  15083368 ttggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagt 15083318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 3543111 - 3543063
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 3543063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 33078363 - 33078283
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaa 112  Q
    ||||||| |||||||||| |||  |||||||||| | |||||| || |||| ||||||| ||||||||||||  |||||||    
T  33078363 tggtgccgtttaatttggaaaatgagactttttttttaccatgggacagtccctttacccaggacacctgtcagttttgaa 33078283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 81
Target Start/End: Original strand, 3542816 - 3542862
Alignment:
Q  35 tgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||| ||| ||||||| ||||||| ||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 3542862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 24551648 - 24551566
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagtctctttaccaaggacacctgtcgattttgaact 114  Q
    ||||||| ||||||||| |||   ||||||||||  ||| |||| |||||  ||||||| |||||| ||||||||||||||||    
T  24551648 tggtgccgtttaatttgagaattgagactttttttccactatgaaaaagtacctttacccaggacatctgtcgattttgaact 24551566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 186
Target Start/End: Complemental strand, 24551541 - 24551489
Alignment:
Q  133 ctcaatttattattttaatgttgtttccaagcttactactgcacctccccattt 186  Q
    |||||||||||||||||||||| ||| ||||||||||| |||| |||| |||||    
T  24551541 ctcaatttattattttaatgtt-ttttcaagcttactattgcatctcctcattt 24551489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 33480677 - 33480628
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  33480677 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 33480628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7159389 - 7159341
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| | ||||||||| || |||| ||||||    
T  7159389 ggtgccatttaatttgggaaagcaaacttttttcccatcatgggaaagt 7159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 7193338 - 7193386
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  7193338 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 7193386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 7532488 - 7532440
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||| ||||||||||||||||| |||||| ||| |||||||| ||||||    
T  7532488 ggtggcatttaatttgggaaaggagacttctttttcaccatgggaaagt 7532440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 22579931 - 22579983
Alignment:
Q  29 tcttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||||||| ||| || |||  ||||||| ||||||    
T  22579931 tcttggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagt 22579983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 49610705 - 49610754
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||| ||||||||||||||||||||||| | ||||| ||||||    
T  49610705 tggtgccattttatttgggaaagaagacttttttccctccatgggaaagt 49610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 193850 - 193898
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagt 193898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 43737728 - 43737777
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  43737728 tggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagt 43737777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 1012547 - 1012595
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||| ||||||||||||||| ||| ||||||| ||||||| ||||||    
T  1012547 ggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagt 1012595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 16270207 - 16270255
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 16270255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 23440913 - 23440865
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 23440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 51974437 - 51974485
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  51974437 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 51974485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 51987827 - 51987875
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||| ||||||||||||||||| |||||| |||| ||||||| ||||||    
T  51987827 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 27625 - 27575
Alignment:
Q  31 ttggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||||| |||| ||| ||||||| ||||||| ||||||    
T  27625 ttggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagt 27575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000002; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 4607470 - 4607512
Alignment:
Q  39 atttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||    
T  4607470 atttaatttgggaaagtagacttttttcccaccatgggaaagt 4607512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 8204120 - 8204168
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  8204120 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 8204168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 12190206 - 12190158
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||  ||| ||||||| ||||||| ||||||    
T  12190206 ggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagt 12190158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 15184065 - 15184017
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 15184017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 31147477 - 31147538
Alignment:
Q  138 tttattattttaatgttgtttccaagcttactactgcacctccccatttttccattacaccaca 201  Q
    |||||||||||||||||||||  ||||||||| ||||||  |||||||| | ||||||| ||||    
T  31147477 tttattattttaatgttgttttgaagcttactgctgcac--ccccatttcttcattacaacaca 31147538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 39950403 - 39950451
Alignment:
Q  32 tggtgccatttaatttgggaaagaagacttttttctcaccatgagaaag 80  Q
    ||||||||||||||||||||||| ||| || |||| ||||||| |||||    
T  39950403 tggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 208 - 160
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  208 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000003; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 668179 - 668227
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 668227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 17145622 - 17145670
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 17145670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 37468910 - 37468958
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  37468910 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 37468958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 37469053 - 37469005
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 37469005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 37864355 - 37864307
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    ||||||||||||||||||||| |||| || |||| ||||||| ||||||    
T  37864355 ggtgccatttaatttgggaaataagagttctttcccaccatgggaaagt 37864307  T

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Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 38778854 - 38778902
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  38778854 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 38778902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 38779611 - 38779563
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 38779563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 41194513 - 41194561
Alignment:
Q  33 ggtgccatttaatttgggaaagaagacttttttctcaccatgagaaagt 81  Q
    |||||||||||||||||||||| ||| || |||| ||||||| ||||||    
T  41194513 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagt 41194561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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