View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4163_low_1 (Length: 592)

Name: NF4163_low_1
Description: NF4163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4163_low_1
NF4163_low_1
[»] chr4 (79 HSPs)
chr4 (1-248)||(39522124-39522371)
chr4 (320-574)||(39523397-39523651)
chr4 (320-574)||(394154-394416)
chr4 (356-574)||(20399783-20400000)
chr4 (320-574)||(477892-478153)
chr4 (356-573)||(13965584-13965800)
chr4 (320-574)||(22757073-22757335)
chr4 (358-574)||(6911706-6911921)
chr4 (320-574)||(39837573-39837836)
chr4 (320-574)||(29268657-29268919)
chr4 (320-574)||(43244261-43244523)
chr4 (356-574)||(38944028-38944244)
chr4 (358-574)||(24825675-24825890)
chr4 (321-570)||(8712510-8712767)
chr4 (356-574)||(26674396-26674613)
chr4 (356-574)||(50801241-50801458)
chr4 (356-573)||(7060348-7060563)
chr4 (356-574)||(7083692-7083913)
chr4 (335-574)||(13586120-13586362)
chr4 (323-574)||(7861086-7861344)
chr4 (320-574)||(24568593-24568855)
chr4 (356-574)||(43493167-43493384)
chr4 (358-570)||(5814373-5814583)
chr4 (361-573)||(6881985-6882196)
chr4 (320-571)||(44756925-44757184)
chr4 (356-574)||(19745413-19745630)
chr4 (356-574)||(19794176-19794393)
chr4 (321-574)||(51152105-51152365)
chr4 (356-574)||(25658191-25658408)
chr4 (356-574)||(26742343-26742560)
chr4 (367-574)||(24611680-24611885)
chr4 (320-574)||(30202017-30202279)
chr4 (321-574)||(27394810-27395071)
chr4 (355-574)||(36124228-36124445)
chr4 (356-574)||(24100163-24100381)
chr4 (362-574)||(626430-626639)
chr4 (367-558)||(8517352-8517542)
chr4 (356-574)||(2447824-2448041)
chr4 (376-538)||(11210228-11210390)
chr4 (356-574)||(42197576-42197794)
chr4 (328-574)||(20887637-20887889)
chr4 (356-570)||(22049288-22049502)
chr4 (368-574)||(29922873-29923076)
chr4 (358-539)||(12717031-12717213)
chr4 (356-574)||(45350950-45351169)
chr4 (356-574)||(45360429-45360648)
chr4 (454-574)||(31522067-31522187)
chr4 (395-574)||(28837128-28837306)
chr4 (367-569)||(27090759-27090959)
chr4 (472-574)||(53647772-53647873)
chr4 (454-570)||(56236706-56236821)
chr4 (492-574)||(32616739-32616820)
chr4 (429-538)||(40198460-40198569)
chr4 (406-569)||(55600422-55600584)
chr4 (458-570)||(24789316-24789426)
chr4 (458-570)||(24818833-24818943)
chr4 (17-168)||(39581306-39581459)
chr4 (458-568)||(56062114-56062224)
chr4 (452-570)||(22121566-22121683)
chr4 (356-414)||(31522006-31522064)
chr4 (492-569)||(3159154-3159230)
chr4 (473-569)||(6082309-6082404)
chr4 (455-570)||(7454749-7454863)
chr4 (389-448)||(32616830-32616889)
chr4 (498-572)||(43278100-43278173)
chr4 (458-539)||(37431303-37431384)
chr4 (93-166)||(39571647-39571722)
chr4 (483-566)||(13169329-13169411)
chr4 (458-569)||(31932388-31932498)
chr4 (511-544)||(22621610-22621643)
chr4 (492-570)||(18995449-18995523)
chr4 (458-570)||(46829533-46829644)
chr4 (454-529)||(37869930-37870004)
chr4 (400-538)||(51958420-51958556)
chr4 (500-538)||(56172012-56172050)
chr4 (499-536)||(1531964-1532001)
chr4 (358-425)||(3159068-3159136)
chr4 (487-559)||(12754318-12754389)
chr4 (93-166)||(39576831-39576906)
[»] chr7 (77 HSPs)
chr7 (321-574)||(9785297-9785558)
chr7 (320-574)||(46025909-46026171)
chr7 (356-574)||(10094465-10094682)
chr7 (320-574)||(45457436-45457698)
chr7 (367-574)||(3266423-3266627)
chr7 (356-574)||(21603486-21603701)
chr7 (356-574)||(21990685-21990903)
chr7 (359-574)||(45482091-45482305)
chr7 (356-574)||(32740777-32740993)
chr7 (356-574)||(42603649-42603866)
chr7 (356-574)||(1281017-1281234)
chr7 (356-574)||(11833043-11833259)
chr7 (356-574)||(17509084-17509301)
chr7 (356-574)||(17543913-17544130)
chr7 (335-574)||(9719853-9720095)
chr7 (323-574)||(39532855-39533114)
chr7 (320-574)||(48304272-48304537)
chr7 (356-574)||(10574405-10574622)
chr7 (356-574)||(42644700-42644913)
chr7 (358-574)||(24320103-24320318)
chr7 (356-574)||(15674491-15674709)
chr7 (356-574)||(43847094-43847311)
chr7 (358-570)||(4621251-4621462)
chr7 (361-574)||(41287987-41288197)
chr7 (356-573)||(5684389-5684604)
chr7 (356-573)||(5709439-5709654)
chr7 (320-574)||(6667374-6667636)
chr7 (362-574)||(22747389-22747599)
chr7 (323-573)||(2622575-2622832)
chr7 (387-574)||(36719432-36719620)
chr7 (397-574)||(36252994-36253171)
chr7 (358-570)||(21954702-21954914)
chr7 (358-470)||(28664895-28665007)
chr7 (356-484)||(17473692-17473820)
chr7 (356-484)||(17579394-17579522)
chr7 (356-484)||(36579281-36579409)
chr7 (391-538)||(37375946-37376093)
chr7 (444-574)||(40761700-40761829)
chr7 (360-466)||(32643040-32643146)
chr7 (454-570)||(29352349-29352463)
chr7 (391-570)||(9137017-9137193)
chr7 (408-539)||(15017290-15017421)
chr7 (487-574)||(17473632-17473718)
chr7 (487-574)||(17579496-17579582)
chr7 (484-574)||(24988360-24988449)
chr7 (356-461)||(27535480-27535587)
chr7 (430-567)||(25112610-25112746)
chr7 (498-574)||(28664821-28664896)
chr7 (499-574)||(26161118-26161192)
chr7 (390-468)||(26161038-26161116)
chr7 (454-543)||(9137530-9137619)
chr7 (486-567)||(27050350-27050430)
chr7 (452-569)||(32116467-32116583)
chr7 (494-574)||(27535590-27535669)
chr7 (487-574)||(36579221-36579307)
chr7 (486-567)||(37714633-37714713)
chr7 (481-570)||(38276993-38277081)
chr7 (358-570)||(39707315-39707521)
chr7 (459-538)||(4028307-4028387)
chr7 (359-466)||(14657808-14657917)
chr7 (473-538)||(5238094-5238159)
chr7 (406-567)||(6495966-6496126)
chr7 (391-538)||(6646509-6646652)
chr7 (486-539)||(37593273-37593326)
chr7 (473-569)||(46881320-46881415)
chr7 (393-570)||(10623861-10624035)
chr7 (454-525)||(23303631-23303702)
chr7 (500-555)||(25531620-25531674)
chr7 (519-574)||(44482753-44482807)
chr7 (498-544)||(27704979-27705025)
chr7 (497-566)||(32571736-32571804)
chr7 (492-536)||(14627875-14627919)
chr7 (510-570)||(14657735-14657794)
chr7 (486-538)||(43256465-43256517)
chr7 (513-570)||(5436048-5436104)
chr7 (502-567)||(22493204-22493268)
chr7 (506-569)||(38273076-38273140)
[»] chr3 (75 HSPs)
chr3 (320-574)||(14585441-14585703)
chr3 (320-574)||(31462634-31462896)
chr3 (320-539)||(11819062-11819290)
chr3 (323-574)||(31270308-31270567)
chr3 (321-574)||(40883754-40884018)
chr3 (357-574)||(22484990-22485206)
chr3 (358-574)||(48652328-48652543)
chr3 (320-574)||(3456922-3457180)
chr3 (324-574)||(40013160-40013421)
chr3 (356-575)||(36624582-36624799)
chr3 (320-574)||(36691687-36691949)
chr3 (356-574)||(54238908-54239123)
chr3 (356-574)||(35174728-35174949)
chr3 (356-574)||(49627983-49628192)
chr3 (358-574)||(33637429-33637644)
chr3 (320-574)||(53155318-53155580)
chr3 (388-574)||(55454922-55455106)
chr3 (320-574)||(30156169-30156431)
chr3 (358-574)||(32080642-32080857)
chr3 (367-574)||(39610247-39610451)
chr3 (320-574)||(1074782-1075043)
chr3 (358-570)||(105927-106139)
chr3 (376-574)||(19861167-19861365)
chr3 (356-574)||(24483567-24483783)
chr3 (399-574)||(53402688-53402862)
chr3 (358-523)||(55090521-55090686)
chr3 (361-478)||(41868277-41868394)
chr3 (421-574)||(48854966-48855118)
chr3 (320-571)||(27189295-27189544)
chr3 (356-513)||(38527287-38527444)
chr3 (368-523)||(2147762-2147918)
chr3 (458-574)||(45047640-45047755)
chr3 (376-558)||(3312487-3312669)
chr3 (472-575)||(54706602-54706704)
chr3 (394-570)||(3961654-3961830)
chr3 (356-466)||(19645245-19645355)
chr3 (320-519)||(34960807-34961008)
chr3 (356-519)||(4206456-4206616)
chr3 (472-570)||(47733769-47733866)
chr3 (320-466)||(13701967-13702122)
chr3 (385-569)||(25135204-25135390)
chr3 (320-442)||(48400878-48401009)
chr3 (421-558)||(53962206-53962343)
chr3 (356-570)||(39429393-39429606)
chr3 (492-574)||(34103636-34103716)
chr3 (499-574)||(48401029-48401103)
chr3 (498-574)||(41868211-41868286)
chr3 (487-574)||(13701889-13701975)
chr3 (487-574)||(19645347-19645432)
chr3 (376-439)||(34103739-34103802)
chr3 (412-538)||(40401424-40401550)
chr3 (482-570)||(566298-566385)
chr3 (498-574)||(55446223-55446298)
chr3 (458-537)||(42167937-42168016)
chr3 (452-570)||(48212459-48212577)
chr3 (458-570)||(2147882-2147993)
chr3 (459-540)||(37451865-37451946)
chr3 (391-440)||(4219239-4219288)
chr3 (454-569)||(53293192-53293308)
chr3 (356-424)||(4817867-4817935)
chr3 (511-567)||(20044743-20044798)
chr3 (483-543)||(32408728-32408788)
chr3 (458-533)||(534103-534178)
chr3 (454-521)||(4817807-4817874)
chr3 (385-543)||(5327391-5327553)
chr3 (483-535)||(26318713-26318765)
chr3 (427-531)||(40702544-40702648)
chr3 (472-542)||(7117799-7117869)
chr3 (452-509)||(7658272-7658329)
chr3 (409-466)||(24520714-24520771)
chr3 (499-567)||(31730811-31730878)
chr3 (487-523)||(34960832-34960868)
chr3 (499-574)||(48401280-48401359)
chr3 (356-419)||(54706710-54706774)
chr3 (320-356)||(54706777-54706813)
[»] chr8 (55 HSPs)
chr8 (358-574)||(14600586-14600801)
chr8 (321-574)||(41361712-41361973)
chr8 (320-574)||(31407636-31407898)
chr8 (320-574)||(37612632-37612894)
chr8 (371-574)||(7579743-7579945)
chr8 (356-574)||(37128375-37128591)
chr8 (323-574)||(12329608-12329868)
chr8 (323-574)||(10338710-10338969)
chr8 (320-574)||(24791056-24791318)
chr8 (320-574)||(39067577-39067839)
chr8 (356-574)||(2234358-2234575)
chr8 (358-572)||(31308174-31308387)
chr8 (358-574)||(4757191-4757406)
chr8 (358-574)||(30026770-30026983)
chr8 (356-572)||(9501613-9501825)
chr8 (361-571)||(24699861-24700070)
chr8 (323-574)||(31202440-31202699)
chr8 (361-574)||(10147976-10148186)
chr8 (320-574)||(1810110-1810369)
chr8 (356-539)||(1039816-1039998)
chr8 (368-539)||(22787528-22787699)
chr8 (358-574)||(11161908-11162124)
chr8 (358-574)||(2025112-2025312)
chr8 (358-570)||(2968557-2968769)
chr8 (454-574)||(43937065-43937184)
chr8 (358-574)||(28296995-28297211)
chr8 (358-570)||(32778849-32779054)
chr8 (358-570)||(10334200-10334413)
chr8 (394-566)||(13576090-13576254)
chr8 (421-574)||(19720102-19720250)
chr8 (355-574)||(13570627-13570832)
chr8 (326-466)||(3204751-3204899)
chr8 (465-565)||(24210374-24210473)
chr8 (391-538)||(4429120-4429267)
chr8 (356-503)||(15288752-15288903)
chr8 (356-503)||(15469121-15469272)
chr8 (445-569)||(20992920-20993043)
chr8 (449-571)||(38546044-38546165)
chr8 (458-566)||(35778974-35779081)
chr8 (487-574)||(3204673-3204759)
chr8 (498-569)||(10633074-10633144)
chr8 (473-555)||(4928111-4928192)
chr8 (487-569)||(6219989-6220070)
chr8 (454-560)||(18204093-18204198)
chr8 (358-415)||(23971140-23971197)
chr8 (486-570)||(19488983-19489066)
chr8 (512-566)||(33526566-33526619)
chr8 (502-543)||(14186909-14186950)
chr8 (458-539)||(42261060-42261141)
chr8 (482-537)||(26673587-26673641)
chr8 (454-543)||(977333-977422)
chr8 (505-543)||(30261900-30261938)
chr8 (502-532)||(32726606-32726636)
chr8 (323-352)||(19384326-19384355)
chr8 (529-574)||(23971071-23971115)
[»] chr2 (77 HSPs)
chr2 (358-573)||(4426539-4426753)
chr2 (320-574)||(9978549-9978811)
chr2 (320-574)||(22597114-22597376)
chr2 (320-574)||(43474008-43474270)
chr2 (320-570)||(5754267-5754525)
chr2 (356-574)||(35333529-35333746)
chr2 (320-574)||(20561012-20561274)
chr2 (320-574)||(38535185-38535447)
chr2 (364-574)||(10286887-10287095)
chr2 (356-573)||(32314466-32314682)
chr2 (320-574)||(12704666-12704928)
chr2 (358-574)||(25067878-25068091)
chr2 (320-574)||(31908697-31908958)
chr2 (358-574)||(44942311-44942527)
chr2 (367-574)||(4732106-4732311)
chr2 (320-574)||(7072828-7073090)
chr2 (320-574)||(18089277-18089534)
chr2 (356-574)||(28230977-28231194)
chr2 (356-573)||(13740541-13740757)
chr2 (376-573)||(28261769-28261965)
chr2 (358-574)||(4604187-4604402)
chr2 (358-574)||(4739355-4739570)
chr2 (320-574)||(11937739-11938001)
chr2 (320-574)||(36867987-36868249)
chr2 (384-573)||(12890999-12891188)
chr2 (358-574)||(27095731-27095947)
chr2 (358-574)||(34962956-34963161)
chr2 (367-574)||(13878889-13879092)
chr2 (367-574)||(14019014-14019217)
chr2 (356-574)||(34416643-34416858)
chr2 (320-574)||(17268006-17268266)
chr2 (320-570)||(15919853-15920111)
chr2 (368-570)||(34471002-34471203)
chr2 (387-574)||(41797649-41797832)
chr2 (421-574)||(29542881-29543034)
chr2 (455-573)||(38384338-38384455)
chr2 (320-574)||(9689865-9690115)
chr2 (427-574)||(43695963-43696109)
chr2 (323-484)||(33012059-33012229)
chr2 (385-513)||(32015277-32015404)
chr2 (358-570)||(17767444-17767647)
chr2 (458-574)||(32015378-32015494)
chr2 (391-570)||(17792533-17792711)
chr2 (412-567)||(823845-823999)
chr2 (454-570)||(11798407-11798523)
chr2 (481-570)||(27666359-27666447)
chr2 (474-569)||(11581015-11581109)
chr2 (452-570)||(13548785-13548901)
chr2 (445-570)||(6510595-6510719)
chr2 (421-566)||(7581975-7582119)
chr2 (485-570)||(20124653-20124737)
chr2 (458-570)||(40039192-40039304)
chr2 (375-558)||(45694342-45694532)
chr2 (472-543)||(15261323-15261394)
chr2 (487-574)||(33012203-33012289)
chr2 (472-570)||(6431286-6431383)
chr2 (449-555)||(26254835-26254939)
chr2 (394-569)||(12994098-12994270)
chr2 (458-543)||(20607224-20607309)
chr2 (480-543)||(36080671-36080734)
chr2 (454-543)||(2550292-2550381)
chr2 (421-558)||(11426732-11426868)
chr2 (454-570)||(5171918-5172032)
chr2 (391-532)||(15028230-15028372)
chr2 (503-543)||(20598577-20598617)
chr2 (458-538)||(44149956-44150036)
chr2 (458-532)||(11561592-11561666)
chr2 (417-495)||(19382399-19382477)
chr2 (458-544)||(23256532-23256617)
chr2 (358-438)||(6431402-6431483)
chr2 (458-523)||(38450363-38450428)
chr2 (499-539)||(8781719-8781759)
chr2 (391-523)||(17116330-17116464)
chr2 (472-535)||(32520273-32520336)
chr2 (473-538)||(19904649-19904714)
chr2 (481-538)||(38233719-38233776)
chr2 (320-356)||(12891195-12891231)
[»] chr5 (59 HSPs)
chr5 (320-574)||(17331307-17331569)
chr5 (320-574)||(6281023-6281285)
chr5 (362-574)||(3740387-3740598)
chr5 (320-574)||(33164348-33164610)
chr5 (356-574)||(34431084-34431299)
chr5 (361-574)||(17096121-17096331)
chr5 (356-574)||(39179708-39179925)
chr5 (358-574)||(18653808-18654023)
chr5 (356-574)||(42396393-42396609)
chr5 (356-573)||(17699577-17699793)
chr5 (358-574)||(29097815-29098030)
chr5 (361-573)||(32347595-32347806)
chr5 (356-574)||(42609168-42609385)
chr5 (358-574)||(6635276-6635489)
chr5 (320-571)||(28040608-28040867)
chr5 (320-574)||(20483165-20483427)
chr5 (385-574)||(2555230-2555418)
chr5 (362-558)||(12891706-12891901)
chr5 (388-574)||(7771701-7771887)
chr5 (356-574)||(27241088-27241305)
chr5 (358-574)||(177984-178201)
chr5 (378-574)||(11734699-11734892)
chr5 (359-574)||(26294937-26295152)
chr5 (356-574)||(23881996-23882213)
chr5 (358-574)||(6681756-6681969)
chr5 (389-574)||(23428306-23428493)
chr5 (358-570)||(17687231-17687442)
chr5 (360-570)||(25961953-25962156)
chr5 (358-574)||(980909-981120)
chr5 (454-574)||(17732266-17732385)
chr5 (362-569)||(39531295-39531494)
chr5 (320-574)||(43493851-43494101)
chr5 (375-570)||(12215177-12215369)
chr5 (472-564)||(11858050-11858141)
chr5 (458-570)||(14535024-14535135)
chr5 (356-470)||(12439617-12439731)
chr5 (391-536)||(25487667-25487812)
chr5 (376-570)||(7150860-7151048)
chr5 (472-570)||(17523406-17523504)
chr5 (397-567)||(35275873-35276044)
chr5 (463-555)||(39915624-39915715)
chr5 (487-574)||(3079214-3079300)
chr5 (472-543)||(18573459-18573530)
chr5 (458-543)||(9196749-9196833)
chr5 (358-466)||(3079292-3079400)
chr5 (502-574)||(12439543-12439614)
chr5 (486-570)||(26905521-26905604)
chr5 (391-538)||(26240593-26240740)
chr5 (481-555)||(34906302-34906375)
chr5 (395-555)||(32309226-32309386)
chr5 (458-567)||(35402161-35402269)
chr5 (454-566)||(20187493-20187604)
chr5 (454-528)||(1419153-1419227)
chr5 (458-538)||(39532252-39532332)
chr5 (480-535)||(374430-374485)
chr5 (486-539)||(39415568-39415622)
chr5 (482-543)||(6639144-6639205)
chr5 (486-539)||(39531651-39531704)
chr5 (320-356)||(7771912-7771948)
[»] chr1 (67 HSPs)
chr1 (320-574)||(7995440-7995702)
chr1 (359-574)||(14265311-14265525)
chr1 (356-574)||(44517171-44517388)
chr1 (320-574)||(45750457-45750719)
chr1 (323-574)||(29205267-29205526)
chr1 (320-570)||(12871600-12871858)
chr1 (356-574)||(37822226-37822442)
chr1 (356-574)||(3232812-3233029)
chr1 (320-575)||(424170-424433)
chr1 (356-570)||(42490917-42491130)
chr1 (358-574)||(4882239-4882454)
chr1 (320-574)||(28678010-28678272)
chr1 (376-574)||(15391132-15391329)
chr1 (358-574)||(10627026-10627240)
chr1 (358-574)||(27534725-27534938)
chr1 (358-574)||(13488416-13488631)
chr1 (358-574)||(17347624-17347838)
chr1 (359-574)||(29726477-29726690)
chr1 (356-574)||(42276380-42276596)
chr1 (320-575)||(33486909-33487172)
chr1 (323-539)||(20411555-20411779)
chr1 (385-539)||(15791189-15791343)
chr1 (361-574)||(45193508-45193718)
chr1 (387-574)||(33938893-33939081)
chr1 (358-574)||(18343640-18343853)
chr1 (358-484)||(51418040-51418165)
chr1 (321-484)||(32784088-32784260)
chr1 (391-570)||(13999025-13999203)
chr1 (358-570)||(32878733-32878945)
chr1 (412-570)||(29069725-29069883)
chr1 (412-570)||(47551177-47551332)
chr1 (481-574)||(4870913-4871005)
chr1 (361-570)||(28399213-28399414)
chr1 (458-539)||(32301464-32301545)
chr1 (395-570)||(24114563-24114737)
chr1 (484-570)||(9298300-9298385)
chr1 (427-538)||(2513515-2513629)
chr1 (356-533)||(33125725-33125903)
chr1 (498-574)||(32784245-32784320)
chr1 (454-570)||(39080799-39080914)
chr1 (484-571)||(13869790-13869875)
chr1 (454-570)||(29938360-29938474)
chr1 (498-574)||(51418150-51418225)
chr1 (385-567)||(8737403-8737584)
chr1 (395-538)||(10782564-10782707)
chr1 (483-570)||(26097889-26097975)
chr1 (454-543)||(40862729-40862817)
chr1 (482-570)||(10304728-10304815)
chr1 (395-566)||(29551637-29551807)
chr1 (481-569)||(38783216-38783303)
chr1 (400-570)||(50107797-50107967)
chr1 (454-570)||(8937752-8937866)
chr1 (454-570)||(28082258-28082375)
chr1 (431-567)||(8925288-8925422)
chr1 (445-570)||(25032972-25033096)
chr1 (486-570)||(29802780-29802863)
chr1 (472-544)||(34899120-34899191)
chr1 (452-539)||(15312523-15312610)
chr1 (356-433)||(4871046-4871123)
chr1 (454-542)||(10599003-10599089)
chr1 (395-535)||(34335006-34335146)
chr1 (501-540)||(45425388-45425427)
chr1 (445-522)||(8744058-8744135)
chr1 (457-538)||(16574971-16575052)
chr1 (505-538)||(31427065-31427098)
chr1 (320-356)||(33939108-33939144)
chr1 (492-536)||(40646711-40646755)
[»] scaffold0121 (1 HSPs)
scaffold0121 (361-574)||(13125-13337)
[»] scaffold1379 (2 HSPs)
scaffold1379 (320-570)||(967-1228)
scaffold1379 (358-574)||(1-216)
[»] chr6 (54 HSPs)
chr6 (358-574)||(23654276-23654491)
chr6 (362-574)||(31937300-31937510)
chr6 (358-558)||(19402706-19402903)
chr6 (358-574)||(12481250-12481465)
chr6 (361-570)||(4921765-4921973)
chr6 (358-574)||(6419738-6419953)
chr6 (375-574)||(31705208-31705406)
chr6 (356-574)||(6296129-6296347)
chr6 (356-574)||(6302939-6303157)
chr6 (320-574)||(8693534-8693802)
chr6 (358-574)||(4393796-4394011)
chr6 (320-523)||(14783101-14783313)
chr6 (376-574)||(23638000-23638195)
chr6 (320-466)||(15590066-15590221)
chr6 (362-574)||(35219793-35219995)
chr6 (320-490)||(21507771-21507950)
chr6 (385-510)||(29927038-29927162)
chr6 (367-569)||(2488173-2488373)
chr6 (450-570)||(13871504-13871623)
chr6 (484-574)||(2304718-2304807)
chr6 (416-539)||(29284836-29284960)
chr6 (455-574)||(1106747-1106865)
chr6 (358-461)||(2304802-2304905)
chr6 (472-574)||(14783022-14783123)
chr6 (487-575)||(15589987-15590074)
chr6 (458-537)||(15175936-15176015)
chr6 (390-569)||(31801116-31801293)
chr6 (458-569)||(15470122-15470232)
chr6 (407-569)||(27135188-27135347)
chr6 (487-574)||(23101288-23101374)
chr6 (480-570)||(1418981-1419070)
chr6 (487-574)||(21507717-21507803)
chr6 (356-410)||(31937574-31937628)
chr6 (498-570)||(12654187-12654258)
chr6 (454-570)||(16328952-16329067)
chr6 (499-570)||(8508295-8508365)
chr6 (454-569)||(16360922-16361036)
chr6 (454-525)||(18248918-18248989)
chr6 (493-539)||(1915100-1915146)
chr6 (373-427)||(15057722-15057776)
chr6 (508-574)||(29920797-29920862)
chr6 (500-569)||(3610230-3610298)
chr6 (454-569)||(5527510-5527625)
chr6 (454-570)||(16338187-16338302)
chr6 (497-535)||(12156301-12156339)
chr6 (476-570)||(28943415-28943507)
chr6 (486-539)||(35038852-35038904)
chr6 (486-538)||(7076696-7076748)
chr6 (501-569)||(16339734-16339801)
chr6 (383-569)||(8978625-8978810)
chr6 (484-543)||(3358921-3358982)
chr6 (473-539)||(7870298-7870364)
chr6 (473-539)||(20028608-20028674)
chr6 (492-536)||(8497004-8497048)
[»] scaffold0056 (1 HSPs)
scaffold0056 (320-574)||(74143-74405)
[»] scaffold0312 (1 HSPs)
scaffold0312 (320-575)||(6116-6379)
[»] scaffold1350 (1 HSPs)
scaffold1350 (367-574)||(1609-1815)
[»] scaffold0155 (1 HSPs)
scaffold0155 (358-574)||(35108-35325)
[»] scaffold0321 (1 HSPs)
scaffold0321 (356-570)||(7008-7221)
[»] scaffold0294 (1 HSPs)
scaffold0294 (367-574)||(3947-4153)
[»] scaffold0001 (1 HSPs)
scaffold0001 (362-570)||(404139-404350)
[»] scaffold0536 (1 HSPs)
scaffold0536 (361-574)||(2931-3141)
[»] scaffold0432 (1 HSPs)
scaffold0432 (358-534)||(2339-2512)
[»] scaffold0202 (1 HSPs)
scaffold0202 (452-566)||(22514-22627)
[»] scaffold0580 (2 HSPs)
scaffold0580 (472-570)||(666-763)
scaffold0580 (472-570)||(8405-8502)
[»] scaffold0886 (1 HSPs)
scaffold0886 (458-569)||(3626-3736)
[»] scaffold0238 (1 HSPs)
scaffold0238 (458-569)||(15565-15675)
[»] scaffold0007 (1 HSPs)
scaffold0007 (480-569)||(201936-202024)
[»] scaffold0006 (1 HSPs)
scaffold0006 (502-569)||(35841-35907)
[»] scaffold0542 (1 HSPs)
scaffold0542 (492-567)||(3942-4016)


Alignment Details
Target: chr4 (Bit Score: 248; Significance: 1e-137; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 39522124 - 39522371
Alignment:
Q  1 ttttaagttatgaaattgatgattgctattcatagaagttggtagaagtagggagtggagaagagaaggggaaccaatgatgaagaagacatagataaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39522124 ttttaagttatgaaattgatgattgctattcatagaagttggtagaagtagggagtggagaagagaaggggaaccaatgatgaagaagacatagataaga 39522223  T
Q  101 ggaagactttagctgtggactggttaagtcgtcacctttgaattttcttatttcttgtttgtttctctctttaattttaaatataaataaaatatttgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39522224 ggaagactttagctgtggactggttaagtcgtcacctttgaattttcttatttcttgtttgtttctctctttaattttaaatataaataaaatatttgaa 39522323  T
Q  201 agttgatttatcacctaccaataccatgactatagtataacacactct 248  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39522324 agttgatttatcacctaccaataccatgactatagtataacacactct 39522371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 39523397 - 39523651
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcattt 419  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||| |||||||||||||||| |||    
T  39523397 gaggggtgatttagagtcaattttgacccaaaaatcaattgtttttccttttatcctaattgaataagtgatttcacatgttttctgttttctttcgttt 39523496  T
Q  420 atttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttattt 519  Q
     |||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39523497 gtttttatgatttcgtcatctctgaacaaatctatttgttttgattttccgtctttgtgcggtgtgttttttatttctcgtcttagtgcggtgtttattt 39523596  T
Q  520 gattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39523597 gattcaggttgaaagattagtttttgagcaagtgcagatccgatcaatgacaatg 39523651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 394416 - 394154
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| |||||||||||||| || |||||||||||||| ||||||| |||    
T  394416 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattcaataagtgatttcacatcttttctgcttt 394317  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||| |||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||    
T  394316 ctttcgtttgtttctatgatttcgtcgtctctgaacgactctgtttgttttgatttcccgcctttgtgtgatgtgttttttatttcccgtcttagtgcgg 394217  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||   |||||||||||| |||| |||||||||||||||    
T  394216 tgtttatttgattcaggttgaaagatta-actttgagcaagtgtagatccgatcaatgacaatg 394154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 20400000 - 20399783
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||| ||||| |||  |    
T  20400000 aattgctttttcttctatcctaattgaataagtgatttcatatattttctgttttctttcgtttatttttgtgatttcgtcgtctctgaacgactcttct 20399901  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  20399900 tgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcagtttgaaagattag-ctttgagcaagtgca 20399802  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  20399801 aatccgatcaatgacaatg 20399783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 478153 - 477892
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca--------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    |||||||||||||  ||||||||||||||||||||||        ||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||| |    
T  478153 gaggggtgatttatggtcaattttgacccaaaaatcaccatccgaattgtttttccttatatcctaattgaataagtgattttacatattttctgtttcc 478054  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||||||||| |||||||||  ||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||    
T  478053 tttcgtttatttttgtgatttcgttttctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggt 477954  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||| | |||||||||||||    
T  477953 gtttatttgattcaggttgaaaaattag-ctttgagcaagtgcagatccaatcaatgacaatg 477892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 13965584 - 13965800
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||| ||| ||||| |||||||||||||||| ||||| |||  |    
T  13965584 aattgtttttccttctatcctaattgaataagtgatttcacatattctatgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgat 13965683  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  13965684 tgttttgatttcccgtctttgtgcgatgtgttttttatttcccgtcttagtgcggtgtttatttgatttaggttgaaagattag-ctttgagcaagtgca 13965782  T
Q  556 gattcgatcaatgacaat 573  Q
    ||| ||||||||||||||    
T  13965783 gatccgatcaatgacaat 13965800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 22757073 - 22757335
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||| |||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  22757073 gaggggtgatttagggtcaattttgactcaaaaatcaccactccgaattgtttttccttctatcctaattgaataagtgatttcacatattttatgtttt 22757172  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
     |||| ||| ||||| |||||||||||||| | ||||| ||| ||||||||||||| ||| ||||||| ||||||||||| |||||  ||||||||||||    
T  22757173 ttttcgtttgtttttgtgatttcgtcgtctatgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcctgtcttagtgcgg 22757272  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  22757273 tgtttatttgattcaggttgaaagattag-ctttgagcaaatgcagatccgatcaatgacaatg 22757335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 6911706 - 6911921
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||| |||||||||||||| ||| ||||    
T  6911706 ttgtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcttcgtctctaaacgactctgtttg 6911805  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  6911806 ttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgaacaagagcaga 6911904  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  6911905 tccgatcaatgacaatg 6911921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 39837573 - 39837836
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca--------attgttttttc--ttctatcctaattgaacaagtgatttcacatattttctgttt 409  Q
    |||||||||||||  ||||||||||||||||||||||        ||| |||||||  || ||||||||||||| |||||||||||||||||||||||||    
T  39837573 gaggggtgatttagcgtcaattttgacccaaaaatcaccccttcgatttttttttcccttttatcctaattgaataagtgatttcacatattttctgttt 39837672  T
Q  410 tctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcg 509  Q
    |||||| ||| ||||| |||||||||| ||| | ||||| | | ||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||||    
T  39837673 tctttcgtttgtttttttgatttcgtcatctttgaacgactttgtttgttttgattttccgtctttgtgcggtgtgtgttttatttcccgtcttagtgcg 39837772  T
Q  510 gtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||| |||||||||||||||    
T  39837773 gtgtttatttgattcaggttgaaatatttg-ctttgagcaagtgcagatccgatcaatgacaatg 39837836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 29268919 - 29268657
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| |||||||||||||| |||||||          |||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  29268919 gaggggtgatttaaggtcaattttgaccctaaaatcacccctccgagttgtttttccttttatcctaattgaataagtgatttcacatattttctgtttt 29268820  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||| | ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  29268819 ctttcgtttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgg 29268720  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||| |  |||||| |||||||||| | | |||||||||||    
T  29268719 tgtttatttgattcaggttgaaagatt-gactttgaggaagtgcagatccaaccaatgacaatg 29268657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 43244523 - 43244261
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||    
T  43244523 gaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgtttttccttctatcctaattgaataagtgatttcacatattttcgatttt 43244424  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||| ||||||||| ||||| ||| |||||||| |||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  43244423 ctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttaatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgg 43244324  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||| ||||| |||||||||||||  |||||||||||||| || |||||||||||||||    
T  43244323 tgtttatttcattcaagttgaaagattag-ctttgagcaagtgcatatccgatcaatgacaatg 43244261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 38944244 - 38944028
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||| || ||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  38944244 aattgtttttccttctatcgtagttgaataagtgatttcacatatttt-tgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 38944146  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||    
T  38944145 tgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagaatag-ctttgagcaagtgca 38944047  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| ||||||| |||||||    
T  38944046 gatccgatcaaggacaatg 38944028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 24825675 - 24825890
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||| |  |||| ||| ||||    
T  24825675 ttgtttttccttctatcctaattgaataagtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttg 24825774  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||| ||| ||||  |||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||||    
T  24825775 ttttgatttcccgtctttgtgcggtgtgtatttgattttccgtcttagtgcggtctttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 24825873  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  24825874 tccgatcaatgacaatg 24825890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 321 - 570
Target Start/End: Original strand, 8712510 - 8712767
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||| ||||  ||||||||||||||||||| |||||||    
T  8712510 aggggtgatttagggtcaattttgacccaaaaatcacccctcataattgtttttccttctatcctagttgagtaagtgatttcacatattttttgttttc 8712609  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| |||||||||| ||||| || || ||| ||||||||||||| ||| ||||||| ||||||||||| | ||| |||||||||||| |    
T  8712610 tttcgtttgtttttgtgatttcgtcatctctgaatgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgagttcccgtcttagtgcgat 8712709  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  8712710 gtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgac 8712767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 26674396 - 26674613
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||| |||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||| ||||| ||||| | | ||    
T  26674396 aattgcttttccttctatcataattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcatctctgaacgactttgtt 26674495  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||||||||||||||| ||||| ||||||||||  ||| ||||||||||||||||||||||||||  ||||||||||||||    
T  26674496 tgttttgatttcccgtctttgtgtggtgtgtttttgatttcccgtcttagtgtcgtgcttatttgattcaggttgaaagattag-ctttgagcaagtgca 26674594  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  26674595 gatccgatcaatgacaatg 26674613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 50801241 - 50801458
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||| ||| ||    
T  50801241 aattatttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctgaacgactctgtt 50801340  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||  ||| |||||||  || |||||||  |||| ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  50801341 tgttttgattccccgtctttgtgcagtttgtttttggtttcccgtcttagtgctgtgtttatttgattcaggttgaaagatta-attttgagcaagtgca 50801439  T
Q  556 gattcgatcaatgacaatg 574  Q
    |||  ||||||||||||||    
T  50801440 gatctgatcaatgacaatg 50801458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 7060348 - 7060563
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||| | ||||| ||| ||    
T  7060348 aattgtttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtt 7060447  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    | |||||||||  || | | ||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  7060448 tcttttgatttctcgtc-tcgtgcggtgtgttttttatttcccgtcttaatgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgca 7060545  T
Q  556 gattcgatcaatgacaat 573  Q
    ||| ||||||||||||||    
T  7060546 gatccgatcaatgacaat 7060563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 7083913 - 7083692
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  7083913 aattgtttttccttctatcataattgaataagtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 7083814  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtt----tatttgattcaggttgaaagattagtttttgagcaag 551  Q
    ||||||||||| ||| ||||||  ||||||||||| ||||| |||| ||||||||||||    |||||||||||||||||||||||||  ||||||||||    
T  7083813 tgttttgatttcccgtctttgtacggtgtgtttttgatttcccgtcctagtgcggtgtttatatatttgattcaggttgaaagattag-ctttgagcaag 7083715  T
Q  552 tgcagattcgatcaatgacaatg 574  Q
    ||||||| |||||||||||||||    
T  7083714 tgcagatccgatcaatgacaatg 7083692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 335 - 574
Target Start/End: Complemental strand, 13586362 - 13586120
Alignment:
Q  335 gtcaattttgacccaaaaatc---aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttcttt-catttatttttatgat 430  Q
    |||||||||||| |||||||    |||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||| | ||| ||||| ||||    
T  13586362 gtcaattttgactcaaaaattccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgat 13586263  T
Q  431 ttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttg 530  Q
    |||||| ||||| ||||| ||| ||||||||||||| ||| ||| |||| |||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  13586262 ttcgtcatctctgaacgactctgtttgttttgatttcccgtcttcgtgttgtgtgtgtttgattttccgtcttagtgcggtgtttatttgattcaggttg 13586163  T
Q  531 aaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||  ||||||||||||||||| |||||||||||||||    
T  13586162 aaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 13586120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 323 - 574
Target Start/End: Complemental strand, 7861344 - 7861086
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    |||||||||| | |||||||||||||||||||||         ||| ||||| |||||||||||||| || |||||||||||||||||||||||||| ||    
T  7861344 gggtgatttagaatcaattttgacccaaaaatcaccactctgaattatttttccttctatcctaattaaataagtgatttcacatattttctgtttt-tt 7861246  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    |||||| ||||| |||||||||||||||| ||||| |||| ||||||| |||| ||| ||| ||| | ||||||||| ||||| ||||||||||||||||    
T  7861245 tcatttgtttttgtgatttcgtcgtctctgaacgactctacttgttttaatttcccgtcttcgtgcgatgtgtttttgatttcccgtcttagtgcggtgt 7861146  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||   ||| ||||||||||||| |||||||||||||||    
T  7861145 ttatttgattcaggttgaaagatta-actttaagcaagtgcagatccgatcaatgacaatg 7861086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 24568855 - 24568593
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  || |||||||||||||||||||         ||| ||||| ||||||||||||||||| ||||||||| ||||||| ||||||||    
T  24568855 gaggggtgatttagggtgaattttgacccaaaaatcacccttccgaattatttttccttctatcctaattgaataagtgattttacatattatctgtttt 24568756  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
     |||| ||| ||||| |||||||||||| ||| ||||| ||  ||||||||||||| ||| ||||||| ||||||||||||||||  |||||||||| ||    
T  24568755 atttcgtttgtttttgtgatttcgtcgtatctgaacgactccgtttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgggg 24568656  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||||||    
T  24568655 tgtttatttgattcaggttgaaagattag-ctttgagaaagtgcagatccgatcaatgacaatg 24568593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 43493384 - 43493167
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||| ||||| ||| ||    
T  43493384 aattgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctgaacgactctgtt 43493285  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| |||| |||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||    
T  43493284 tgttttgatttcccgtctttgtgcggtgcgtttttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagattag-ctttgagcaagtgca 43493186  T
Q  556 gattcgatcaatgacaatg 574  Q
     ||  | ||||||||||||    
T  43493185 tatctggtcaatgacaatg 43493167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 5814373 - 5814583
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||  |||||||| |||||||| |||| ||||||||||||||  |||||||||| ||| ||||| ||||||||||||||||  |||| ||| ||||    
T  5814373 ttgttttcccttctatcttaattgaataagttatttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttg 5814472  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| | || ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5814473 ttttgatttcccgtcctt-tgtggtgtgttttttatttttcgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 5814570  T
Q  558 ttcgatcaatgac 570  Q
    |||||||||||||    
T  5814571 ttcgatcaatgac 5814583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 361 - 573
Target Start/End: Original strand, 6881985 - 6882196
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| |||||||||||||| || ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||   ||| |||||||    
T  6881985 tttttccttctatcctaattaaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacatctctgtttgttt 6882084  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| |||| || | ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||  | ||||||||||||||| |    
T  6882085 tgatttcccgtctttttgcgttgtgttttttattttccgtcttaatgcggtgtttatttgattcaggttgaaagattag-ctatgagcaagtgcagatcc 6882183  T
Q  561 gatcaatgacaat 573  Q
    |||||||||||||    
T  6882184 gatcaatgacaat 6882196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 320 - 571
Target Start/End: Complemental strand, 44757184 - 44756925
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||          |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||    
T  44757184 gaggggtgatttaaggtcaattttgacccaaaaatcacccattcgagttgtttttccttctatcctaattgaataagtgatttcacatattttatgtttt 44757085  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||||||||||||||||||||  | || | | |||||||||||||  || ||||||| ||||||||||| ||||  | |||||||||||    
T  44757084 ctttcgtttgtttttatgatttcgtcgtctctgcatgactttgtttgttttgatttctcgtctttgtgcggtgtgtttttgattttccatcttagtgcgg 44756985  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||| |||| |||||||    
T  44756984 tgtttatttgattcaggttgaaagatcag-cattgagcaagtgcagatccgattaatgaca 44756925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 19745413 - 19745630
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttattttta-tgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||||||||||||| ||| |||||  |||||| ||||||||| ||||| ||| |    
T  19745413 aattgtttttgcttttatcctaattgaataattgatttcacatattttctgttttctttcgtttgttttttgtgatttagtcgtctctgaacgactctgt 19745512  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| | | ||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||    
T  19745513 ttgttttgatttgc-gtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttgtttgattcaggttgaaagattag-ctttgagcaagtgc 19745610  T
Q  555 agattcgatcaatgacaatg 574  Q
    |||| |||| ||||||||||    
T  19745611 agatccgattaatgacaatg 19745630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 19794393 - 19794176
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttattttta-tgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||| ||| ||||||||||||| || |||||||||||||||||||||||||||| ||| |||||  |||||| ||||||||| ||||| ||| |    
T  19794393 aattgtttttgcttttatcctaattgaataattgatttcacatattttctgttttctttcgtttgttttttgtgatttagtcgtctctgaacgactctgt 19794294  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| | | ||||||| ||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||  |||||||||||||    
T  19794293 ttgttttgatttgc-gtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttgtttgattcaggttgaaagattag-ctttgagcaagtgc 19794196  T
Q  555 agattcgatcaatgacaatg 574  Q
    |||| |||| ||||||||||    
T  19794195 agatccgattaatgacaatg 19794176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 321 - 574
Target Start/End: Original strand, 51152105 - 51152365
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  |||||| |||||||||||||||         ||||||||| |||||||||||||| || |||||||||||||||||||||| ||||    
T  51152105 aggggtgatttanggtcaatattgacccaaaaatcacccctccgaattgtttttccttctatcctaatttaataagtgatttcacatattttctgctttc 51152204  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||  |||||||||| ||||| ||||| ||  ||||||||||||| ||| ||||||| ||||||||||| ||||| ||| ||||| ||||    
T  51152205 tttcgtttgttttg-tgatttcgtcatctctgaacgactccgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgttttagtacggt 51152303  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  51152304 gtttatttgattcaggttgaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 51152365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 25658191 - 25658408
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||| |||||||| || ||||||||||||||||||||||||||||||| | | ||||| |||||||||||||||| ||||| | | ||    
T  25658191 aattgtttttccttctttcctaatttaataagtgatttcacatattttctgttttctttcgtatgtttttgtgatttcgtcgtctctgaacgactttgtt 25658290  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||  || ||||||| ||||||||||||||||  |||||||||||| ||||||||||||| | |||||||||||||  ||||||||||||||    
T  25658291 tgttttgatttcacgtctttgtgcggtgtgttttttatttgccgtcttagtgcgatgtttatttgatttatgttgaaagattag-ctttgagcaagtgca 25658389  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| ||||||| |||||||    
T  25658390 gatccgatcaacgacaatg 25658408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 26742560 - 26742343
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||  |||||| ||||||| | ||||| ||| |     
T  26742560 aattgtttttctttctatcttaattgaataagtgatttcacatattttctgttttctttcgtttgttttcgtgattttgtcgtctttgaacgactctgta 26742461  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| |||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| |    
T  26742460 tgttttgatttcccgtctttgtgcggtgtgattttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagattag-ctttgagcaagtgta 26742362  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  26742361 gatccgatcaatgacaatg 26742343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 367 - 574
Target Start/End: Complemental strand, 24611885 - 24611680
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |||| |||  |||| |||||||| ||||||| ||||| ||| |||||||||||||    
T  24611885 cttctatcctaattgaataagtgatttcacatattttctattttttttcgtttgcttttgtgatttcgacgtctctgaacgactctgtttgttttgattt 24611786  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    | || ||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||||||||||  ||||||    
T  24611785 ttcgtctttgtgcgttgtgtttttcatttctcgtcttagtgcggtg-ttatttgattcaggttgaaagatta-actttgagcaagtgcagatctgatcaa 24611688  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  24611687 tgacaatg 24611680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 30202017 - 30202279
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||| ||||||||||          |||||||| ||| |||| |||||||| ||||||||||||||||||||||||||    
T  30202017 gaggggtgatttaaggtcaattttgatccaaaaatcaccccttctagttgtttttccttttatcttaattgaataagtgatttcacatattttctgtttt 30202116  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||  ||||||||||| ||||| ||| ||||||| |    
T  30202117 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtacggtgtgtttttgatttcccgttttagtgcag 30202216  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    || |||||||||||| ||||||| |||||  |||||| ||||||| || |||||||||||||||    
T  30202217 tggttatttgattcaagttgaaaaattag-ctttgaggaagtgcaaatccgatcaatgacaatg 30202279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 321 - 574
Target Start/End: Original strand, 27394810 - 27395071
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  ||||||||||||||||||||||         ||| ||||| ||||||||||||||||| |||| |||| | ||||||| |||||||    
T  27394810 aggggtgatttagggtcaattttgacccaaaaatcacccttccggattatttttccttctatcctaattgaataagtaatttaaaatattttatgttttc 27394909  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| |||||||||||||||| ||||| | |  |||||||||||| ||  ||| ||| ||||||||||| ||| | ||||||||||||||    
T  27394910 tttcgtttgtttttgtgatttcgtcgtctctgaacgactttgattgttttgatttcccttcttcgtgcggtgtgtttttgattccccgtcttagtgcggt 27395009  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||    
T  27395010 gtttatttgattcaggttgaaagattag-ctttaagcaagtgcagatccgatcaatgacaatg 27395071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 355 - 574
Target Start/End: Complemental strand, 36124445 - 36124228
Alignment:
Q  355 caattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    ||||||||||| || ||||| ||||||||  | ||||||||||||||||  |||||||||| ||| ||||| |||||||||||||||| ||||| ||  |    
T  36124445 caattgtttttcctcctatcttaattgaatgattgatttcacatatttt--gttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactcagt 36124348  T
Q  455 tt-gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    || ||||||||||||||  ||||||  |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  36124347 tttgttttgattttccgtttttgtgcagtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtg 36124249  T
Q  554 cagattcgatcaatgacaatg 574  Q
    || ||||||||||||||||||    
T  36124248 caaattcgatcaatgacaatg 36124228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 24100163 - 24100381
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttct--gttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||||||||| |||||||| |||||||| |||||||||||||||||||||  |||||||||| ||| |||||   |||||||||||| | ||||| |||     
T  24100163 aattgtttttccttctatcgtaattgaataagtgatttcacatattttctctgttttctttcgtttgtttttgcaatttcgtcgtctgtgaacgactctg 24100262  T
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    |||||||| ||||  || |||||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  24100263 tttgttttaatttctcgtctttgtatggtgtgttttt-atttttcgtcttagtgtggtgtttatttgattcaggttgaaagattag-ctttgagcaagtg 24100360  T
Q  554 cagattcgatcaatgacaatg 574  Q
     |||| |||||||||||||||    
T  24100361 tagatccgatcaatgacaatg 24100381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 362 - 574
Target Start/End: Complemental strand, 626639 - 626430
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    ||||||||||||| |||||||| |||||||| |||||||||||||||||||||| ||| ||||| |||||||||| ||| | ||||| |||  |||||||    
T  626639 tttttcttctatcataattgaataagtgatt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcctctgtgaacgactctgattgtttt 626541  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    |||||  || ||||||| ||||||| ||||||||| |||  |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||    
T  626540 gatttctcgtctttgtgcggtgtgt-ttttatttcccgtactagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccg 626443  T
Q  562 atcaatgacaatg 574  Q
    | |||||||||||    
T  626442 accaatgacaatg 626430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 367 - 558
Target Start/End: Complemental strand, 8517542 - 8517352
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||| ||||||||| ||||||||| ||||||||||||||||||||| ||| ||||| |||||||| ||||||| ||||| | | |||||||||||||    
T  8517542 cttctattctaattgaataagtgattttacatattttctgttttctttcgtttgtttttgtgatttcgccgtctctgaacgactttgtttgttttgattt 8517443  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
      || |||| || ||||||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  8517442 ctcgtctttatgaggtgtgtgttttatttcccgtcttagtgtggtgtttatttgatttaggttgaaagattag-ttttgagcaagtgcagat 8517352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 2447824 - 2448041
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| |||||| |||||||||||||||| ||||||||||||||| ||| ||||||| ||  ||| ||||| ||||||| |||||| | ||||| ||| ||    
T  2447824 aattatttttttttctatcctaattgaataagtgatttcacataatttatgttttcattagtttgtttttgtgatttcttcgtctttgaacgactctgtt 2447923  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| |||  |||||| |||||||||||||| || |||||||||||||||||||||||||| | ||||||||||||   ||||||||||||||    
T  2447924 tgttttgatttcccgtttttgtgcggtgtgttttttatatcccgtcttagtgcggtgtttatttgatttatgttgaaagatta-actttgagcaagtgca 2448022  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||||| |||||||| ||||    
T  2448023 gattcaatcaatgagaatg 2448041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 376 - 538
Target Start/End: Complemental strand, 11210390 - 11210228
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt 475  Q
    |||||||| |||||||||||||||||| || ||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||||| ||||    
T  11210390 taattgaataagtgatttcacatatttactcttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtcttt 11210291  T
Q  476 gtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||  |||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||    
T  11210290 gtgcagtgtgtttttgagttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta 11210228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 42197576 - 42197794
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttcttt--catttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||| ||||| |||||||||||||| || |||||| ||||| |||||| |||||| |||  ||||| ||||| |||||||||||||||| || || |||     
T  42197576 aattatttttccttctatcctaatttaataagtgacttcacgtattttttgttttttttttcatttgtttttgtgatttcgtcgtctctgaatgactctg 42197675  T
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| ||||||| ||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  42197676 tttgttttgattt-ccgtctttgtgcggtgtatttttattttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-tctttgagcaagtg 42197773  T
Q  554 cagattcgatcaatgacaatg 574  Q
    ||||| ||||| |||||||||    
T  42197774 cagatccgatcgatgacaatg 42197794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 328 - 574
Target Start/End: Complemental strand, 20887889 - 20887637
Alignment:
Q  328 atttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatt 418  Q
    |||||| ||||||||||||||||||||||         ||| || ||| ||||||| ||||| || |||||||||||||| ||||||| |||||||| ||    
T  20887889 atttaaggtcaattttgacccaaaaatcacccatccgaattattattttttctatcttaattcaataagtgatttcacat-ttttctgctttctttcgtt 20887791  T
Q  419 tatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatt 518  Q
    | ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| |||||||  |||||||||||||||| |||||||||||| |||||| |    
T  20887790 tgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccgtcttagtgcgatgttta-t 20887692  T
Q  519 tgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||| ||||||||||||  ||||||||| |||| || |||||||||||||||    
T  20887691 tgattcagattgaaagattag-ctttgagcaaatgcaaatccgatcaatgacaatg 20887637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 356 - 570
Target Start/End: Complemental strand, 22049502 - 22049288
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||| ||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||||||  || | | | |    
T  22049502 aattgtttttccttctatcctaattgaataagtgatttccacatattttcagttttctttcatttatttttatggtttcgttgtctctgcacaactgtgt 22049403  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    ||||||||||||  |||||||||  ||||||||||||||||| |||||||||||||||||||||| ||| ||| |  |||||||   ||| |||||||||    
T  22049402 ttgttttgatttctcgcctttgtccggtgtgttttttatttcacgtcttagtgcggtgtttattttatttaggattgaagatta-actttaagcaagtgc 22049304  T
Q  555 agattcgatcaatgac 570  Q
    |||| |||||||||||    
T  22049303 agatccgatcaatgac 22049288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 368 - 574
Target Start/End: Original strand, 29922873 - 29923076
Alignment:
Q  368 ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgatttt 467  Q
    |||||||||||||||| ||||||||||||||||||||| ||| ||||| | | ||||| |||||| ||||||||| ||||| ||| |||||||||||||     
T  29922873 ttctatcctaattgaataagtgatttcacatattttctatttcctttcgtctgtttttgtgattttgtcgtctctgaacgactctgtttgttttgatttc 29922972  T
Q  468 ccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
     || ||||||| ||||||  ||| ||||  ||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| ||||||||    
T  29922973 tcgtctttgtgcggtgtg--tttgattttccgtcttagtacggtgtttatttgattcaggttgaaagattag-ctatgagcaagtgcagatccgatcaat 29923069  T
Q  568 gacaatg 574  Q
    |||||||    
T  29923070 gacaatg 29923076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 358 - 539
Target Start/End: Complemental strand, 12717213 - 12717031
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||| |||||||||| ||| ||||| ||||||| |||||||   |||| |||||||    
T  12717213 ttgttttttcttctatcctaattaaataagtgatttccacatattttcagttttctttcgtttgtttttgtgatttcttcgtctcagcacgactctattt 12717114  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||||  || ||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||    
T  12717113 gttttgatttctcgtctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaggattag 12717031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 45351169 - 45350950
Alignment:
Q  356 aattgttttttc-ttctatcctaatt-gaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||||||||||| || ||| |||||| ||| |||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||| ||| | |||     
T  45351169 aattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtctctgaacaactctg 45351070  T
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| | |||||||| ||||||||||||| ||| |||||||||||||  ||||| ||||||    
T  45351069 tttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcttagtgtggtgtttatttgactcaagttgaaagattag-ctttgatcaagtg 45350971  T
Q  554 cagattcgatcaatgacaatg 574  Q
    |||||  ||| ||||||||||    
T  45350970 cagatctgattaatgacaatg 45350950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 45360648 - 45360429
Alignment:
Q  356 aattgttttttc-ttctatcctaatt-gaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||||||||||| || ||| |||||| ||| |||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||||| ||| | |||     
T  45360648 aattgttttttccttttattctaatttgaataagtgatttcacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtctctgaacaactctg 45360549  T
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| | |||||||| ||||||||||||| ||| |||||||||||||  ||||| ||||||    
T  45360548 tttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcttagtgtggtgtttatttgactcaagttgaaagattag-ctttgatcaagtg 45360450  T
Q  554 cagattcgatcaatgacaatg 574  Q
    |||||  ||| ||||||||||    
T  45360449 cagatctgattaatgacaatg 45360429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 454 - 574
Target Start/End: Original strand, 31522067 - 31522187
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgtttt-ttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagt 552  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  31522067 tttgttttgattttccgtctttgtgcggtgtgtttttttatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattag-ttttgagcaagt 31522165  T
Q  553 gcagattcgatcaatgacaatg 574  Q
    |||||| |||||||||||||||    
T  31522166 gcagatccgatcaatgacaatg 31522187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 395 - 574
Target Start/End: Original strand, 28837128 - 28837306
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatt 494  Q
    |||||||||||||||| |||| ||| ||||| ||||||||||||||||  ||||  || ||||||||||||| ||| ||||||||||||||||||| |||    
T  28837128 acatattttctgttttttttcgtttgtttttgtgatttcgtcgtctctgcacgacgctgtttgttttgatttcccgtctttgtgtggtgtgtttttgatt 28837227  T
Q  495 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |   ||||||||||||||||||||| ||||| |||||||||||||  |||||||||||| |||| ||| |||||||||||    
T  28837228 ttctgtcttagtgcggtgtttatttaattcacgttgaaagattag-ctttgagcaagtgaagatccgaacaatgacaatg 28837306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 569
Target Start/End: Original strand, 27090759 - 27090959
Alignment:
Q  367 cttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgatt 465  Q
    ||||||||||||| ||| |||||||||| || |||||||  ||||||||| ||| ||||  | ||||||| ||||||  |||| | | ||||||||||||    
T  27090759 cttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttgttttg-taatttcgttgtctctgcacgactatgtttgttttgatt 27090857  T
Q  466 ttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatca 565  Q
    ||||| |||||||||||||| |||||||||   ||||||||||||||||||| | ||||||||||||||||||   |||||||||||| |||| ||||||    
T  27090858 ttccgtctttgtgtggtgtg-tttttattttatgtcttagtgcggtgtttatcttattcaggttgaaagatta-actttgagcaagtgtagatccgatca 27090955  T
Q  566 atga 569  Q
    ||||    
T  27090956 atga 27090959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 472 - 574
Target Start/End: Original strand, 53647772 - 53647873
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||    
T  53647772 ctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttatttgattcaggttgaaaaatta-actttgagcaagtgcagatccgatcaatgaca 53647870  T
Q  572 atg 574  Q
    |||    
T  53647871 atg 53647873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 56236821 - 56236706
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||||||| | ||||| ||||||||||| ||||| ||||||| | |||| ||||||||||||| ||||||||||||   |||||||||| |    
T  56236821 tttgttttgattttccgtcgttgtgcggtgtgtttttgatttcccgtcttaatacggtatttatttgattcaagttgaaagatta-actttgagcaagcg 56236723  T
Q  554 cagattcgatcaatgac 570  Q
    ||||| |||||||||||    
T  56236722 cagatccgatcaatgac 56236706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 574
Target Start/End: Complemental strand, 32616820 - 32616739
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||  ||||||||||||||    
T  32616820 atttcccgtcttagtgcggtgtttatttgattcaagttgaaagattag-ctttgagcaagtgcagatctgatcaatgacaatg 32616739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 429 - 538
Target Start/End: Complemental strand, 40198569 - 40198460
Alignment:
Q  429 atttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggt 528  Q
    |||||||||||| |  |||| ||| ||||||||||||| ||  ||||||| | |||  |||| |||||||||||||||| ||||||||||||||||||||    
T  40198569 atttcgtcgtctttgcacgattctgtttgttttgatttcccatctttgtgcgttgtcattttgatttctcgtcttagtgtggtgtttatttgattcaggt 40198470  T
Q  529 tgaaagatta 538  Q
    ||||||||||    
T  40198469 tgaaagatta 40198460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 406 - 569
Target Start/End: Complemental strand, 55600584 - 55600422
Alignment:
Q  406 gttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttag 505  Q
    |||||||||  ||| || || |||||| |||||||||| || | | | |||||||||||||  |  | |||||  |||||||||||||||||| ||||||    
T  55600584 gttttcttttgtttcttattgtgattttgtcgtctctacacaactttgtttgttttgatttctcatcgttgtgcagtgtgttttttatttctcatcttag 55600485  T
Q  506 tgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    | ||||||||||||||||| | ||||||||||||  |||||||||| |||||| | ||||||||    
T  55600484 tacggtgtttatttgattccgcttgaaagattag-ctttgagcaagcgcagatccaatcaatga 55600422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 570
Target Start/End: Original strand, 24789316 - 24789426
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||| || ||| ||||||| |||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||| ||||||    
T  24789316 ttttgaattcccgtctttgtgcggtgagttttg-atttctcgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgatcaaatgcaga 24789413  T
Q  558 ttcgatcaatgac 570  Q
    ||| | |||||||    
T  24789414 ttcaaccaatgac 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 570
Target Start/End: Complemental strand, 24818943 - 24818833
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||| || ||| ||||||| |||| |||||  ||||||||||||||||| ||||||||||||||||||||||||||||||  ||||| ||| ||||||    
T  24818943 ttttgaattcccgtctttgtgcggtgagttttg-atttctcgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgatcaaatgcaga 24818846  T
Q  558 ttcgatcaatgac 570  Q
    ||| | |||||||    
T  24818845 ttcaaccaatgac 24818833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 17 - 168
Target Start/End: Original strand, 39581306 - 39581459
Alignment:
Q  17 tgatgattgctattcatagaagttggtagaagtagggagtgg-agaagagaagggga--accaatgatgaagaagacatagataagaggaagactttagc 113  Q
    |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||   ||||||||   ||||||| |  |||||| ||||||| || |    
T  39581306 tgatgactgctattcatagaagttagtagaagtagggagtgggagaagagaagggggggaccaatga---agaagacttgcataagaagaagactctatc 39581402  T
Q  114 tgtggactgg--ttaagtcgtcacctttgaattttcttatttcttgtttgtttctct 168  Q
    |||||||||   |||||| |||  |||||||||||||| || ||| |||||||||||    
T  39581403 tgtggactgtgattaagttgtccgctttgaattttctttttccttatttgtttctct 39581459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 458 - 568
Target Start/End: Original strand, 56062114 - 56062224
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgtttt-ttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||| ||| |||||||||   |||||| |||||||||||||||||||  ||||||||||||||| ||||| | |||| | ||||||||||| |||    
T  56062114 ttttgatttcccgtctttgtgtgacatgtttttttatttctcgtcttagtgcaatgtttatttgattcaagttgacatatta-tctttgagcaagtacag 56062212  T
Q  557 attcgatcaatg 568  Q
    |||| |||||||    
T  56062213 attcaatcaatg 56062224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 570
Target Start/End: Original strand, 22121566 - 22121683
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    |||||||||||||||  || |||||||   ||||||||| ||| | ||||||| || ||||||||||||||||| ||||||| |||||  ||||||||||    
T  22121566 tatttgttttgatttctcgtctttgtgcaatgtgtttttgattacacgtcttaatgtggtgtttatttgattcaagttgaaatattag-ctttgagcaag 22121664  T
Q  552 tgcagattcgatcaatgac 570  Q
    |||| |||  |||||||||    
T  22121665 tgcatatttaatcaatgac 22121683  T

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Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 414
Target Start/End: Original strand, 31522006 - 31522064
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttcttt 414  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  31522006 aattgtttttccttctatcctaattgaataagtgatttcacatattctttgttttcttt 31522064  T

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Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 492 - 569
Target Start/End: Original strand, 3159154 - 3159230
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||| |||||||||||| ||||||||||| |||||||||||| ||||  |||||||||||||| || ||||||||||    
T  3159154 atttcccgtcttagtgcgatgtttatttgaatcaggttgaaaggttag-ctttgagcaagtgcatatccgatcaatga 3159230  T

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Target: chr4; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 569
Target Start/End: Complemental strand, 6082404 - 6082309
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||| | ||||||| | ||||||  |||||||  | ||||||||||||| |||||||||||||||  |||||||||||||||||||| |||||||    
T  6082404 tttgtgcgatgtgtttctgatttcttatcttagtatgatgtttatttgatttaggttgaaagattag-ctttgagcaagtgcagattcggtcaatga 6082309  T

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Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 570
Target Start/End: Original strand, 7454749 - 7454863
Alignment:
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    ||||||||||||| || |||||||  |||||||||||||||  | ||||||||| ||||||||||| || ||||| ||| |||||  ||| | |||||||    
T  7454749 ttgttttgatttttcgtctttgtgcagtgtgttttttattttccttcttagtgcagtgtttatttgttttaggttaaaaaattag-ctttaaacaagtgc 7454847  T
Q  555 agattcgatcaatgac 570  Q
    |||||  |||||||||    
T  7454848 agattgaatcaatgac 7454863  T

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Target: chr4; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 32616889 - 32616830
Alignment:
Q  389 gatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacga 448  Q
    |||||||||||||||||||||| |||| ||||||||| |||||||||| ||||| |||||    
T  32616889 gatttcacatattttctgttttatttcgtttatttttgtgatttcgtcatctcttaacga 32616830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 498 - 572
Target Start/End: Original strand, 43278100 - 43278173
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaa 572  Q
    ||||||||||||||||||||||||||||||||| |||||||   |||||||||||| | || ||||| |||||||    
T  43278100 cgtcttagtgcggtgtttatttgattcaggttggaagatta-actttgagcaagtgtatatccgatccatgacaa 43278173  T

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Target: chr4; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 37431303 - 37431384
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||| ||| ||||||| | ||||||||||||||  | ||||||||  |||||||||||||||| ||||||| |||||    
T  37431303 ttttgatttaccgtctttgtgagatgtgttttttattttccatcttagtgtagtgtttatttgattcatgttgaaatattag 37431384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 39571647 - 39571722
Alignment:
Q  93 agataagaggaagactttagctgtggactg--gttaagtcgtcacctttgaattttcttatttcttgtttgtttct 166  Q
    ||||||||||||||||| ||| ||||| ||  |||||||||||| ||||| |||||||| || |||||||||||||    
T  39571647 agataagaggaagacttaagccgtggagtgtggttaagtcgtcagctttggattttcttcttccttgtttgtttct 39571722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 483 - 566
Target Start/End: Complemental strand, 13169411 - 13169329
Alignment:
Q  483 gtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    |||||||||||||| || |||| |   ||||||||||||||||| |||||||||||| |||||| |||||||| |||| |||||    
T  13169411 gtgttttttatttcccgacttacttttgtgtttatttgattcagattgaaagattag-ttttgatcaagtgcaaattcaatcaa 13169329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 569
Target Start/End: Original strand, 31932388 - 31932498
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||| |||||||    |||||||| ||||   || | |||||||||||||||||||||| ||  ||||||||| |||||| |||||| |||    
T  31932388 ttttgattttccgtctttgtgcatcgtgtttttgattttctgtttcagtgcggtgtttatttgattcatgtaaaaagattag-ttttgatcaagtgtaga 31932486  T
Q  558 ttcgatcaatga 569  Q
    ||| ||||||||    
T  31932487 ttcaatcaatga 31932498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 511 - 544
Target Start/End: Original strand, 22621610 - 22621643
Alignment:
Q  511 tgtttatttgattcaggttgaaagattagttttt 544  Q
    ||||||||||||||||||||||||||||||||||    
T  22621610 tgtttatttgattcaggttgaaagattagttttt 22621643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 570
Target Start/End: Original strand, 18995449 - 18995523
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||| ||||||| |||||||||| ||||||||   ||||||||||||| |||||| ||||| ||||||| |||||||||    
T  18995449 atttgtcgtctttgtgcggtgttcatttgatt---gttgaaagattag-ttttgatcaagtacagattcaatcaatgac 18995523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 570
Target Start/End: Original strand, 46829533 - 46829644
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || |||| |||||||||||||||||||  ||||||||  |  |||||||||| || | |||||||||||||  ||||| |||||| |||    
T  46829533 ttttgatttcacgtctttatgtggtgtgttttttattttccgtcttagcacaatgtttatttggttaatgttgaaagattag-ctttgatcaagtgtaga 46829631  T
Q  558 ttcgatcaatgac 570  Q
    ||  |||||||||    
T  46829632 tttaatcaatgac 46829644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 454 - 529
Target Start/End: Original strand, 37869930 - 37870004
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggtt 529  Q
    |||||||| |||||||  ||||||||||||| ||||||||||   |||| |||| | |||||||||||||||||||    
T  37869930 tttgttttaattttccttctttgtgtggtgtattttttatttactgtctcagtg-gatgtttatttgattcaggtt 37870004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 400 - 538
Target Start/End: Original strand, 51958420 - 51958556
Alignment:
Q  400 ttttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcg 499  Q
    ||||| ||||| |||| ||||||||| |||| ||||||||||  | | | | | ||| ||||||||||||| |||| || | ||| ||||||||||  ||    
T  51958420 ttttcagttttatttcgtttatttttgtgatctcgtcgtctcgca-caactttgtttattttgattttccgtctttttgagttgt-ttttttattttccg 51958517  T
Q  500 tcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||     ||||||||||||||||||||||||||||    
T  51958518 tcttagcagattgtttatttgattcaggttgaaagatta 51958556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 500 - 538
Target Start/End: Original strand, 56172012 - 56172050
Alignment:
Q  500 tcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||||||||||||||| ||| ||||||||||||||    
T  56172012 tcttagtgcggtgtttatttaattaaggttgaaagatta 56172050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 536
Target Start/End: Original strand, 1531964 - 1532001
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagat 536  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  1531964 gtcttcgtgcggtgtttatttgattcatgttgaaagat 1532001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 358 - 425
Target Start/End: Original strand, 3159068 - 3159136
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgattt-cacatattttctgttttctttcatttattttt 425  Q
    |||||||| |||||||| ||||| || ||||||||| ||||||||||| | |||||||| ||| |||||    
T  3159068 ttgtttttccttctatcataattaaataagtgattttcacatattttcagctttctttcgtttgttttt 3159136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 559
Target Start/End: Original strand, 12754318 - 12754389
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagatt 559  Q
    |||||||| | ||||||| || ||||||||||||||||| ||||||| ||||   ||||| ||||||||||||    
T  12754318 tttttattacccgtcttaatgtggtgtttatttgattcaagttgaaacatta-actttgaccaagtgcagatt 12754389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 39576831 - 39576906
Alignment:
Q  93 agataagaggaagactttagctgtggactg--gttaagtcgtcacctttgaattttcttatttcttgtttgtttct 166  Q
    ||||||||||||||||| ||| ||||| ||  |||||||| | | ||||| |||||||| || |||||||||||||    
T  39576831 agataagaggaagacttaagccgtggagtgtggttaagtctttagctttggattttcttcttccttgtttgtttct 39576906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 151; Significance: 1e-79; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 321 - 574
Target Start/End: Original strand, 9785297 - 9785558
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  ||||||||||||||||||||||         ||||||||| |||||||| |||||||| ||||||||||||||||||| |||||||    
T  9785297 aggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttctatcttaattgaataagtgatttcacatattttttgttttc 9785396  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||  ||||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| ||||||| ||||||||||| ||||||| ||||||||||||    
T  9785397 ttttgtttatttttgtgatttcgtcgtctctgaacgactctatttgttttgatttcccgtctttgtgcggtgtgtttttgatttctcatcttagtgcggt 9785496  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  9785497 gtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 9785558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 46026171 - 46025909
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||||||||| |||| |||| ||||||||| ||||||    
T  46026171 gaggggtgatttagggtcaattttgacccaaaaatcacacatccgaattgtttttccttctatcctaattgaataagttatttaacatattttttgtttt 46026072  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| | |||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||    
T  46026071 ctttcgtttgtttttgttatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcgg 46025972  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  46025971 tgtttatttgatttaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 46025909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 10094465 - 10094682
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| | ||||| | | ||    
T  10094465 aattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtt 10094564  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10094565 tgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgca 10094663  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  10094664 aatccgatcaatgacaatg 10094682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 45457698 - 45457436
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||| |||||||||         ||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||    
T  45457698 gaggggtgatttagggtcaattttgacgcaaaaatcactcctccgaattgtttttccttctatcttaattgaataagtgatttcacatattttatgtttt 45457599  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||  ||||||| |||||||| ||||| | | ||||||||||||| ||| ||||||| ||||||||||| ||||||||||||||| |||    
T  45457598 ctttcgtttgttttcgtgatttcatcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttctcgtcttagtacgg 45457499  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  45457498 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 45457436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 367 - 574
Target Start/End: Original strand, 3266423 - 3266627
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||| ||||| ||| |||||||||||||    
T  3266423 cttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattttgtcgtctctgaacgactctgtttgttttgattt 3266522  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  3266523 cccgtctttgtgcggtgtg--tttgatttctcgtcttagtacggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaa 3266619  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  3266620 tgacaatg 3266627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 21603486 - 21603701
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||||| |||||| ||||||||| |||  |||||||    
T  21603486 aattgtttttccttctatcctaattgaataagtgatttcacatattctctgttttctttcctttgtttttgtgattttgtcgtctctgaac--atctatt 21603583  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   |||||| |||||||    
T  21603584 tgttttgatttcccgtcattgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagaaagtgca 21603682  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  21603683 gatccgatcaatgacaatg 21603701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 21990685 - 21990903
Alignment:
Q  356 aattgttttttctt-ctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||||| | |||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||| |||||||||||| ||| ||||| ||| |    
T  21990685 aattgttttttcctgctatcctaattgaataagtgatttcacatatattctgttttctttcgtttgtttttgtgatttcgtcgtttctgaacgactcttt 21990784  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  21990785 ttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcagcttgaaagattag-ctttgagcaagtgc 21990883  T
Q  555 agattcgatcaatgacaatg 574  Q
     ||| |||||||||||||||    
T  21990884 tgatccgatcaatgacaatg 21990903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 359 - 574
Target Start/End: Original strand, 45482091 - 45482305
Alignment:
Q  359 tgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgt 458  Q
    ||||||| |||||||||||||| || ||||||||||||||||||| ||  || |||| ||| |||||||||||||||||||||| ||||| ||| |||||    
T  45482091 tgtttttccttctatcctaattaaataagtgatttcacatattttatgcgttgtttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgt 45482190  T
Q  459 tttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    |||||||| ||| ||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  45482191 tttgatttcccgtctttgtgcgatgtgttttttatttcccgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagat 45482289  T
Q  559 tcgatcaatgacaatg 574  Q
     |||||||||||||||    
T  45482290 ccgatcaatgacaatg 45482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 32740777 - 32740993
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| || |||||| |||||||||||||||  ||||| ||| ||    
T  32740777 aattgtttttccttctatcctaattgaataagtgatttcacatattttttgttttctttcgttgatttttgtgatttcgtcgtctcagaacgactctgtt 32740876  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| | | |||||||| || ||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||    
T  32740877 tgttttgatttcctgtctttgtgt-gtatgttttttatttcccgtcttagtgtggtgtctatttgattcaggttgaaagattag-ttttgagcaagtgca 32740974  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  32740975 aatccgatcaatgacaatg 32740993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 42603866 - 42603649
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||| ||| ||    
T  42603866 aattgtttttcattctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctataaacgactctgtt 42603767  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| | |||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  42603766 tgttttgatttcccgtctttgtgcgctgtgttttttatttcctgtcctagtgcggtgtttatttgattcaggttgaaagattag-ctttaagcaagtgca 42603668  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  42603667 tatccgatcaatgacaatg 42603649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 1281234 - 1281017
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  || ||| ||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  1281234 aattgtttttcattatattctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 1281135  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||  || ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  1281134 tgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-cctttgagcaagtgca 1281036  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| ||| |||||||||||    
T  1281035 gatccgaacaatgacaatg 1281017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 11833043 - 11833259
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||||||| ||||||| ||| ||||| ||||||||||||||||  || |  || ||    
T  11833043 aattgtttttccttctttcctaattgaataagtgatttcacatattttctgtattctttcgtttgtttttgtgatttcgtcgtctctgtacaaccctgtt 11833142  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| |||  |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  11833143 tgttttgatttcccgtttttgtgcggtgtg-tttatatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgca 11833240  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  11833241 gatccgatcaatgacaatg 11833259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 17509301 - 17509084
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||||||||| || || ||| ||    
T  17509301 aattatttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttaatttgtttttgtgattttgtcgtctctgaatgactctgtt 17509202  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| |||||||  |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17509201 tgttttgatttcccgtctttgtgcagtgtgtttttgattttccgtcttagtgcggtgtttatttaattcaggttgaaagattag-ttttgagcaagtgca 17509103  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  17509102 gatccgatcaatgacaatg 17509084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 17543913 - 17544130
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||| |||| ||||| |||||| ||||||||| || || ||| ||    
T  17543913 aattatttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttaatttgtttttgtgattttgtcgtctctgaatgactctgtt 17544012  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| |||||||  |||||||||| ||||  |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  17544013 tgttttgatttcccgtctttgtgcagtgtgtttttgattttccgtcttagtgcggtgtttatttaattcaggttgaaagattag-ttttgagcaagtgca 17544111  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  17544112 gatccgatcaatgacaatg 17544130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 335 - 574
Target Start/End: Complemental strand, 9720095 - 9719853
Alignment:
Q  335 gtcaattttgacccaaaaatc---aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttcttt-catttatttttatgat 430  Q
    |||||||||||| |||||||    |||||||||||||| |||| |||||||| |||||||||||||||||||||||||| ||| | ||| ||||| ||||    
T  9720095 gtcaattttgactcaaaaattccaaattgttttttcttatatcgtaattgaataagtgatttcacatattttctgtttttttttcgtttgtttttgtgat 9719996  T
Q  431 ttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttg 530  Q
    |||||| ||||| ||||| ||| ||||||||||||| ||| ||| |||| |||||| ||| ||||  |||||||||||||||||||||||||||||||||    
T  9719995 ttcgtcatctctgaacgactctgtttgttttgatttcccgtcttcgtgttgtgtgtgtttgattttccgtcttagtgcggtgtttatttgattcaggttg 9719896  T
Q  531 aaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||  ||||||||||||||||| |||||||||||||||    
T  9719895 aaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 9719853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 323 - 574
Target Start/End: Complemental strand, 39533114 - 39532855
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||  ||||||||||||||||||||||         ||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||    
T  39533114 gggtgatttagggtcaattttgacccaaaaatcatctctctgaattgtttttccttctatcttaattgaataagtgatttcacatattttctgttttctt 39533015  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    |  ||| ||||  |||||||||||||| | ||||| ||| || |||||||||| ||  ||||||| ||||||||||||||||| || |||||||||||||    
T  39533014 ttgtttgttttcgtgatttcgtcgtctttgaacgactctgttagttttgatttcccatctttgtgcggtgtgttttttatttcccgccttagtgcggtgt 39532915  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||| |||||||||||||  ||||||||||||||||| |||||||||| ||||    
T  39532914 ttatttgattcaagttgaaagattag-ctttgagcaagtgcagatccgatcaatgataatg 39532855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 48304537 - 48304272
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         |||| |||| || |||||||||||||| ||||||||||| | ||||||||||||    
T  48304537 gaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgcttttcctgctatcctaattgaataagtgatttcatagattttctgtttt 48304438  T
Q  411 ctttcatttatttttatg--atttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgc 508  Q
    ||||  ||| ||||| ||  |||||||||||| | ||||| ||| ||||||||||||| ||| ||||||  |||||||||||||||||||||||||||||    
T  48304437 ctttagtttgtttttttgtgatttcgtcgtctttgaacgactctgtttgttttgatttcccgtctttgtacggtgtgttttttatttctcgtcttagtgc 48304338  T
Q  509 ggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatc-aatgacaatg 574  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||| ||||||||||    
T  48304337 ggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcgaatgacaatg 48304272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 10574405 - 10574622
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||  ||||| ||||||||||||||||||||| ||| ||||| |||||||||||||| | ||||| | | ||    
T  10574405 aattgtttttccttttatcctaattgaataaacgattttacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtt 10574504  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||  ||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10574505 tgttttgatttcccgtctttgtgcggtgtgtttttaattttccgtcttagttcggtgtttatttgattcatgttgaaagattag-ttttgagcaagtgca 10574603  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  10574604 gatccgatcaatgacaatg 10574622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 42644700 - 42644913
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||||| ||||||||    |||| ||||| ||| ||    
T  42644700 aattgtttttccttctatcctaattgaataagtgatttcacatattctctgttttctttcgtttgtttttgtgatttcg----ctctgaacgactctgtt 42644795  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||||||||  |||||||||||||||||||||| ||||||||||||| |||||  ||||||||||| ||    
T  42644796 tgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttatttaattcaggttgaaatattag-ctttgagcaagtaca 42644894  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  42644895 gatccgatcaatgacaatg 42644913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 24320318 - 24320103
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| ||||| || ||||||||||||||||||| ||||||||||  ||| ||||| ||||||| ||||||||  |||| ||| ||||    
T  24320318 ttgtttttccttctatcttaatttaataagtgatttcacatattttttgttttcttttgtttgtttttgtgatttcatcgtctctgcacgactctgtttg 24320219  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| |||| || ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  24320218 ttttgatttcccgtctttctgcggtgtgttttttattttccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 24320120  T
Q  558 ttcgatcaatgacaatg 574  Q
    | ||||| |||||||||    
T  24320119 tccgatctatgacaatg 24320103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 15674709 - 15674491
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||| ||||| |||||  || ||    
T  15674709 aattgtttttcctcctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcatctctgaacgaccctgtt 15674610  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttattt-ctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    ||||||||||| ||| ||||||| ||||||||||| |||| | |||||||||| ||||||||||| ||||||||||||||||||| |||| |||||||||    
T  15674609 tgttttgatttcccgtctttgtgcggtgtgtttttgatttccccgtcttagtgtggtgtttattttattcaggttgaaagattagctttt-agcaagtgc 15674511  T
Q  555 agattcgatcaatgacaatg 574  Q
    | |||| ||||| |||||||    
T  15674510 aaattcaatcaacgacaatg 15674491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 43847094 - 43847311
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||  ||||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||  |||||||||||||||| ||||| ||| ||    
T  43847094 aattgtttttcctcttatcctaattgaataagtgatttcacatattttctgttttccttcgtttgttttggtgatttcgtcgtctctgaacgactctgtt 43847193  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    | ||||||||| ||  ||||||| ||||||||||||||||  | ||||||||  ||||||||||||||||||||||||||||||  |||||||||||| |    
T  43847194 tattttgatttcccatctttgtgcggtgtgttttttattttccatcttagtgttgtgtttatttgattcaggttgaaagattag-atttgagcaagtgta 43847292  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  43847293 gatccgatcaatgacaatg 43847311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 358 - 570
Target Start/End: Complemental strand, 4621462 - 4621251
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||| ||||||| || ||||| |||||||||| ||| ||||| ||||| | || |||||  |||| ||| ||||    
T  4621462 ttgtttttccttctaccataattgaataagcgatttcatatgttttcagttttctttcgtttgtttttgtgattccatcatctctgcacgactctgtttg 4621363  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4621362 ttttgattttccgtctttgtgtggtgtgtttttgatttcacgttttagtgcggtgtttatttgattcaggttgaaagattag-ttttgaacaagtgcaga 4621264  T
Q  558 ttcgatcaatgac 570  Q
    | |||||||||||    
T  4621263 tccgatcaatgac 4621251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 361 - 574
Target Start/End: Original strand, 41287987 - 41288197
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| | ||||||||||||||||||||||| ||||| ||| ||||  |||||| ||||||||| |||||  || |||||||    
T  41287987 tttttccttctatcctaattgaataggtgatttcacatattttctgtttcctttcgtttgttttagtgattttgtcgtctctgaacgacactgtttgttt 41288086  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| ||||||| ||||||  ||| ||||  ||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||| |    
T  41288087 tgatttcccgtctttgtgcggtgtg--tttgattttccgtcttagtacggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatcc 41288183  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  41288184 gatcaatgacaatg 41288197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 5684389 - 5684604
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||| |||||| ||||| ||| ||    
T  5684389 aattgtttttcattctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgttgtctctgaacgattctgtt 5684488  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| |||| ||  |||| || || |||||||| ||||  |||||||||  ||||||| |||||||||||||||||||||||  ||||||||||||||    
T  5684489 tgtttttatttcccatcttt-tgcggcgtgtttttgattttccgtcttagtatggtgtttgtttgattcaggttgaaagattag-ctttgagcaagtgca 5684586  T
Q  556 gattcgatcaatgacaat 573  Q
    ||| ||||||||| ||||    
T  5684587 gatccgatcaatgtcaat 5684604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 5709439 - 5709654
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| ||||||||| |||||| ||||| ||| ||    
T  5709439 aattgtttttcattctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgttgtctctgaacgattctgtt 5709538  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| |||| ||  |||| || || |||||||| ||||  |||||||||  ||||||| |||||||||||||||||||||||  ||||||||||||||    
T  5709539 tgtttttatttcccatcttt-tgcggcgtgtttttgattttccgtcttagtatggtgtttgtttgattcaggttgaaagattag-ctttgagcaagtgca 5709636  T
Q  556 gattcgatcaatgacaat 573  Q
    ||| ||||||||| ||||    
T  5709637 gatccgatcaatgtcaat 5709654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 6667374 - 6667636
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaatt-gaacaagtgatttcacatattttctgttt 409  Q
    |||| ||||||||  ||||||||||||||||||||||         ||||||||||||||||| |||||| ||| |||||||||||||||||||||||||    
T  6667374 gaggagtgatttagggtcaattttgacccaaaaatcaccccaccgaattgttttttcttctattctaatttgaataagtgatttcacatattttctgttt 6667473  T
Q  410 tctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcg 509  Q
    | |||  ||| ||| | |||||||||||||||| ||| | ||| ||||||||||||| ||| ||||||| ||||||||||||||||  ||||||||||||    
T  6667474 tgtttg-tttgtttctgtgatttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcg 6667572  T
Q  510 gtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||| |||| ||| ||||||||||| |  ||||| |||||||| ||  ||||||||||||||    
T  6667573 gtgtttaattgactcaagttgaaagatt-ggctttgatcaagtgcatatctgatcaatgacaatg 6667636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 362 - 574
Target Start/End: Complemental strand, 22747599 - 22747389
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||| ||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||| |||||||| |||||||  |||| ||| ||||||||    
T  22747599 ttttccttctatcctaattgaataagtgatttgacatattttatgttttctttcatttatttttgtgatttcgccgtctctgcacgactctttttgtttt 22747500  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    || || ||| ||||||| || |||||||| | ||| |||||||| |||||||||| |||||| |||||||||||||||  | |||||||||||||||  |    
T  22747499 ga-ttcccgtctttgtgcggcgtgtttttgagttcccgtcttagggcggtgtttaattgattaaggttgaaagattag-ctctgagcaagtgcagatctg 22747402  T
Q  562 atcaatgacaatg 574  Q
    |||| ||||||||    
T  22747401 atcattgacaatg 22747389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 323 - 573
Target Start/End: Original strand, 2622575 - 2622832
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||| ||||||||||||||||||||||         ||||||||| |||||||| |||||||| |||| |||||| |||||||||||||||||    
T  2622575 gggtgatttaa-gtcaattttgacccaaaaatcacgcatccgaattgtttttccttctatcttaattgaataagtaatttcagatattttctgttttctt 2622673  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
     | ||| ||||| |||||||||||||| | || |  ||| |||||||||||||  ||  |||||| ||||||||||||||||| | |||| |||||||||    
T  2622674 gcgtttgtttttgtgatttcgtcgtctttgaatggctctgtttgttttgatttctcgtttttgtgcggtgtgttttttatttcccatctttgtgcggtgt 2622773  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaat 573  Q
    ||||||||||||  |||||||||||   ||||||||||||||||| | ||||||||||||    
T  2622774 ttatttgattcaaattgaaagatta-actttgagcaagtgcagatccaatcaatgacaat 2622832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 387 - 574
Target Start/End: Complemental strand, 36719620 - 36719432
Alignment:
Q  387 gtgatttcacata--ttttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    |||||||||||||  |||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||||| |||||||  | ||    
T  36719620 gtgatttcacataaattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcagcgt 36719521  T
Q  485 gttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||  |||||||||| |||| |||||||||||||||||||||||||   ||||||||||| |||||  ||||||||||||||    
T  36719520 gttttttattttccgtcttagtggggtgcttatttgattcaggttgaaagatta-actttgagcaagtacagatctgatcaatgacaatg 36719432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 397 - 574
Target Start/End: Original strand, 36252994 - 36253171
Alignment:
Q  397 atattttctgttttctttcattta-tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttattt 495  Q
    |||||||||| |||||||| |||  ||||| |||||||||||||||| ||||| ||| |||||||| |||| ||| ||||||| ||||||||||| ||||    
T  36252994 atattttctgctttctttctttttctttttgtgatttcgtcgtctctgaacgactctgtttgttttaatttcccgtctttgtgcggtgtgtttttgattt 36253093  T
Q  496 ctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    | | ||||||  |||||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  36253094 cccatcttaggacggtgtttatttgattcaggttgaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 36253171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 358 - 570
Target Start/End: Complemental strand, 21954914 - 21954702
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||  ||||||||||||| || || ||||||| ||||||| || |||||||||| | | ||||| ||||||||||||||||  |||| | | |||    
T  21954914 ttgtttttcattctatcctaattaaataaatgatttccacatattgtcagttttctttcgtctgtttttgtgatttcgtcgtctctgcacgattgtgttt 21954815  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||||   |  ||| ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||     
T  21954814 gttttgatttcaagtttttatgtggtgtgttttttatttttcgtcttagtgtcgtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaa 21954716  T
Q  557 attcgatcaatgac 570  Q
    || |||||||||||    
T  21954715 atccgatcaatgac 21954702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 358 - 470
Target Start/End: Complemental strand, 28665007 - 28664895
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| ||||| ||| ||||    
T  28665007 ttgtttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttg 28664908  T
Q  458 ttttgattttccg 470  Q
    |||||||||||||    
T  28664907 ttttgattttccg 28664895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 356 - 484
Target Start/End: Complemental strand, 17473820 - 17473692
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||| || || ||| ||    
T  17473820 aattgtttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattttgtcgtctctgaatgactctgtt 17473721  T
Q  456 tgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||| ||| ||||||| |||||    
T  17473720 tgttttgatttcccgtctttgtgcggtgt 17473692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 356 - 484
Target Start/End: Original strand, 17579394 - 17579522
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||| |||||| ||||||||| || || ||| ||    
T  17579394 aattgtttttccttttatcctaattgaataagtgatttcacatattttctgtttcctttcatttgtttttgtgattttgtcgtctctgaatgactctgtt 17579493  T
Q  456 tgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||| ||| ||||||| |||||    
T  17579494 tgttttgatttcccgtctttgtgcggtgt 17579522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 356 - 484
Target Start/End: Complemental strand, 36579409 - 36579281
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||| ||||| |||||||| |||||||||| ||||||||||  ||| ||||| |||||||||||||||| ||||| ||||||    
T  36579409 aattgtttttccttctatcctagttgaataagtgattccacatattttttgttttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctatt 36579310  T
Q  456 tgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||| ||| ||| ||| |||||    
T  36579309 tgttttgatttcccgtcttagtgcggtgt 36579281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 391 - 538
Target Start/End: Complemental strand, 37376093 - 37375946
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    |||| |||||||||| ||||||||| ||| ||| | |||||| ||||||||  || || ||| |||||||||||||  || ||||||| |||||||||||    
T  37376093 tttctcatattttctattttctttcgtttgtttatgtgattttgtcgtctcagaatgactctgtttgttttgatttctcgtctttgtgcggtgtgttttt 37375994  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||  ||||||||||||  |||||||||||||||||||||||||||    
T  37375993 tattttccgtcttagtgcgtagtttatttgattcaggttgaaagatta 37375946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 444 - 574
Target Start/End: Original strand, 40761700 - 40761829
Alignment:
Q  444 aacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||| ||| ||||||||||||| ||  | || || ||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||  ||    
T  40761700 aacgactctgtttgttttgatttacctacattatgcggtgtgttttttatttctcgtattagtgcggtgtttatttgattaaggttgaaatattag-ctt 40761798  T
Q  544 tgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||| ||||||||||| |||||||||||||||    
T  40761799 tgaacaagtgcagatccgatcaatgacaatg 40761829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 360 - 466
Target Start/End: Original strand, 32643040 - 32643146
Alignment:
Q  360 gttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtt 459  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||| || || |||  |||||    
T  32643040 gttttttcttctaccttaattgaacaagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctgaaagactctgattgtt 32643139  T
Q  460 ttgattt 466  Q
    |||||||    
T  32643140 ttgattt 32643146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 29352349 - 29352463
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||| |||||  || ||||||| ||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||  |||| |||||||    
T  29352349 tttgtttagatttctcgtctttgtgcggtgtgttttttattcc-cgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgtgcaagtg 29352446  T
Q  554 cagattcgatcaatgac 570  Q
     ||||||||||||||||    
T  29352447 tagattcgatcaatgac 29352463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 391 - 570
Target Start/End: Original strand, 9137017 - 9137193
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    |||||||||||| | || ||||||| ||| ||||| ||||| ||||||||||  |||| ||| |||||||| | |||||| ||||||| |||||||||||    
T  9137017 tttcacatatttcccgtcttctttcgtttctttttgtgattccgtcgtctctgcacgattctgtttgttttta-tttccgtctttgtgcggtgtgttttt 9137115  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||    ||||||| ||||||||||||||| ||||| |||||||||  |||||| ||||||| ||||||||| ||||    
T  9137116 tatttc-atacttagtgtggtgtttatttgattaaggttaaaagattag-ctttgagaaagtgcatattcgatcattgac 9137193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 408 - 539
Target Start/End: Complemental strand, 15017421 - 15017290
Alignment:
Q  408 tttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtg 507  Q
    |||||||  ||| ||||| ||||||||| |||||| ||||| ||| |||||||||||||   | ||||||| ||||||||||||||||  | |||||||     
T  15017421 tttcttttgtttgtttttgtgatttcgttgtctctgaacgactctgtttgttttgatttcttgtctttgtgcggtgtgttttttattttccatcttagtc 15017322  T
Q  508 cggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||||||||||||||||||| |||||    
T  15017321 cggtgtttatttgattcaggttgaaatattag 15017290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 17473718 - 17473632
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  17473718 ttttgatttcccgtctttgtgcggtgtttatttaattcaggttgaaagattag-ttttgagcaagtgcagatccgatcaatgacaatg 17473632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 17579496 - 17579582
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  17579496 ttttgatttcccgtctttgtgcggtgtttatttaattcaggttgaaagattag-ttttgagcaagtgcagatccgatcaatgacaatg 17579582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 574
Target Start/End: Complemental strand, 24988449 - 24988360
Alignment:
Q  484 tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||| |||||||||||||||    
T  24988449 tgtttttggtttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgtagatccgatcaatgacaatg 24988360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 356 - 461
Target Start/End: Original strand, 27535480 - 27535587
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatat--tttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||||||||| ||||||| ||||||| | ||||||||||||||||  |||||||||| |||||||| ||||| |||||| ||||||||||||||| |||     
T  27535480 aattgtttttccttctattctaattgtataagtgatttcacatatattttctgttttatttcatttgtttttgtgattttgtcgtctctaaacgactctg 27535579  T
Q  454 tttgtttt 461  Q
    ||||||||    
T  27535580 tttgtttt 27535587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 430 - 567
Target Start/End: Original strand, 25112610 - 25112746
Alignment:
Q  430 tttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggtt 529  Q
    |||| ||||||||| | || ||| |||||||| ||||| |  ||||||| ||||||||||||||||| ||||||||| || ||||||||||||| | |||    
T  25112610 tttcatcgtctctagaagactctgtttgtttttatttttcttctttgtgcggtgtgttttttatttcacgtcttagtacgatgtttatttgatttaagtt 25112709  T
Q  530 gaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||||||||   |||||||||||||| || ||||||||    
T  25112710 gaaagatta-actttgagcaagtgcatatccgatcaat 25112746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 28664896 - 28664821
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  28664896 cgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatctgatcaatgacaatg 28664821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 574
Target Start/End: Original strand, 26161118 - 26161192
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  26161118 gtcttagtgcggggttcatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 26161192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 390 - 468
Target Start/End: Original strand, 26161038 - 26161116
Alignment:
Q  390 atttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttc 468  Q
    |||||||||||||||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||| |||||||||||||||    
T  26161038 atttcacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgattttc 26161116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 9137530 - 9137619
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||||||||||||  || ||||||| | ||||||||||||||| |||||||| ||  |||||||||||||||| ||||||||||||||||    
T  9137530 tttgttttgatttctcgtctttgtgcgttgtgttttttatttcccgtcttagcgcaatgtttatttgattcagtttgaaagattagtttt 9137619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 486 - 567
Target Start/End: Complemental strand, 27050430 - 27050350
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||| |||||| || ||||||    
T  27050430 ttttttatttctcgtcttagtgcggtgtttatttgattcatgtcgaaagattag-ctttgagcaaatgcagactcaatcaat 27050350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 32116583 - 32116467
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    ||||||||||||||||||  ||||| ||| ||||||||| |||| ||||||||||||| ||||||||| | ||| ||||||| ||||| |||||| ||||    
T  32116583 tatttgttttgattttccatctttgcgtgatgtgtttttgatttttcgtcttagtgcgttgtttattttactcacgttgaaaaattag-ttttgatcaag 32116485  T
Q  552 tgcagattcgatcaatga 569  Q
    |||| |||| || |||||    
T  32116484 tgcaaattcaataaatga 32116467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 494 - 574
Target Start/End: Original strand, 27535590 - 27535669
Alignment:
Q  494 ttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||| |||||||||||||||||| ||| |||||||||||||  ||||||||||||||| ||||| |||||||||||    
T  27535590 ttctcgtctaagtgcggtgtttatttgactcaagttgaaagattag-ctttgagcaagtgcaggttcgaccaatgacaatg 27535669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 36579307 - 36579221
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||  ||||||||| || ||||  ||||||||||||||    
T  36579307 ttttgatttcccgtcttagtgcggtgtttatttgattcagattgaaagattag-ctttgagcaattgtagatctgatcaatgacaatg 36579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 486 - 567
Target Start/End: Original strand, 37714633 - 37714713
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    ||||||||||  |||||||||||  ||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||||    
T  37714633 ttttttattttccgtcttagtgcaatgtttatttgattcaggttgaaagatta-attttgatcaagtgcagattcaatcaat 37714713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 38276993 - 38277081
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||||| |||||||||||  ||||||||||||||| ||||||| |||||  ||||||||||| || || |||||||||||    
T  38276993 gtgtgttttttatttcccgtcttagtgcaatgtttatttgattcatgttgaaatattag-ctttgagcaagttcaaatccgatcaatgac 38277081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 39707315 - 39707521
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||  ||||||||||||| || |||| ||||| |  |||||||  ||||| ||| ||| ||||| |||||||||||||||        ||| |||    
T  39707315 ttgtttttctttctatcctaattaaataagttatttccatgtattttcacttttcattcgtttgtttttgtgatttcgtcgtctcc-------tctgttt 39707407  T
Q  457 gttttgattttccgcctttgtgtggtgtg-ttttttatttctc-gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||||| ||||||| |||||| |||||||||| || |||||||||| |||||||||| ||||| ||||||  ||||   |||||||||||||    
T  39707408 gttttgattttccgtctttgtgcggtgtgtttttttatttttcagtcttagtgcagtgtttattt-attcaagttgaagtatta-actttgagcaagtgc 39707505  T
Q  555 agattcgatcaatgac 570  Q
    |||| | |||||||||    
T  39707506 agatccaatcaatgac 39707521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 538
Target Start/End: Original strand, 4028307 - 4028387
Alignment:
Q  459 tttgattttccgcctttgtgtggtgtgtttt-ttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||||||| ||||||| ||| |||||| ||||||||| ||||| ||| |||||||||||||||| ||||||||||||    
T  4028307 tttgattttccgtctttgtgcggtatgtttttttatttctcatcttattgctgtgtttatttgattcaagttgaaagatta 4028387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 466
Target Start/End: Complemental strand, 14657917 - 14657808
Alignment:
Q  359 tgttttttcttctatcctaattgaacaagtgatttcacatat--tttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||| |||||||| |||||||| |||| |||||||||||  |||| |||||||||  ||| ||||| ||||||||||||||||  |||| ||| |||    
T  14657917 tgtttttccttctatcttaattgaataagttatttcacatatattttcagttttcttttgtttgtttttgtgatttcgtcgtctctgcacgactctgttt 14657818  T
Q  457 gttttgattt 466  Q
     |||||||||    
T  14657817 cttttgattt 14657808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 473 - 538
Target Start/End: Original strand, 5238094 - 5238159
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||| |||||||||| | ||||| |||||| ||||||| ||||||||||||||||||||||||||    
T  5238094 tttgtatggtgtgtttgtgatttcccgtcttggtgcggtatttatttgattcaggttgaaagatta 5238159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 406 - 567
Target Start/End: Original strand, 6495966 - 6496126
Alignment:
Q  406 gttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttag 505  Q
    ||||| |||| ||||||||| |||||  ||||||| |  |||| | | |||||||||||||  || ||| ||  | ||| |||||||| | | |||||||    
T  6495966 gttttttttcgtttatttttgtgattctgtcgtctttgtacgactttgtttgttttgatttctcgtcttcgtacgatgtattttttatatattgtcttag 6496065  T
Q  506 tgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||  ||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||    
T  6496066 tgcaatgtttatttgattcaggttgaaagatta-actttgaacaagtgcagatccgatcaat 6496126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 391 - 538
Target Start/End: Complemental strand, 6646652 - 6646509
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    |||||||||||||| |||||||||| |||  |||| ||||||| | ||||  | || | |  |||| ||||||||| | |  ||||||||||| ||||||    
T  6646652 tttcacatattttcagttttctttcgtttgattttgtgatttcttagtcta-acacaacttaatttattttgatttcctgtttttgtgtggtgcgttttt 6646554  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||||||||| || |||||||||||||||   ||||||||||||    
T  6646553 tatttctcgtcttaatgtggtgtttatttgatt---gttgaaagatta 6646509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 37593273 - 37593326
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  37593273 ttttttatttcccgtcttaatgcggtgtttatttgattcaggttgaaatattag 37593326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 473 - 569
Target Start/End: Original strand, 46881320 - 46881415
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||| ||||||||||| ||||  |||||||||||  ||||||||||||| ||||||||| ||||| |||||| ||||| || |||| ||||||||    
T  46881320 tttgtgcggtgtgtttttgattttccgtcttagtgcaatgtttatttgatttaggttgaaatattag-ttttgatcaagttcaaattcaatcaatga 46881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 393 - 570
Target Start/End: Original strand, 10623861 - 10624035
Alignment:
Q  393 tcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttttta 492  Q
    ||||||| |||| |||||||||| ||| ||||| || ||| ||| |||| | || | | | ||| ||||||||| ||| ||||||| |||||||||| ||    
T  10623861 tcacatagtttcggttttctttcgtttgtttttgtggtttagtcatctc-acactactttgtttattttgatttcccgtctttgtgcggtgtgttttcta 10623959  T
Q  493 tttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
     ||| | |||||| ||  ||||||||||||||| |||||||||||||  ||||| ||||| || |||| |||||||||    
T  10623960 attcacatcttag-gcaatgtttatttgattcaagttgaaagattag-ctttgatcaagtacaaattcaatcaatgac 10624035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 454 - 525
Target Start/End: Original strand, 23303631 - 23303702
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattca 525  Q
    ||||||||||||||||  ||||||| | |||||||||  ||||||||| ||||| | |||||||||||||||    
T  23303631 tttgttttgattttccatctttgtgcgttgtgtttttattttctcgtcctagtgtgatgtttatttgattca 23303702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 500 - 555
Target Start/End: Original strand, 25531620 - 25531674
Alignment:
Q  500 tcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||||||||||||||| |||||||| ||||||  ||||||||||||||    
T  25531620 tcttagtgcggtgtttatttgattaaggttgaatgattag-ctttgagcaagtgca 25531674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 519 - 574
Target Start/End: Complemental strand, 44482807 - 44482753
Alignment:
Q  519 tgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||| ||||| ||| |||||||||||||| |||||||||||||||    
T  44482807 tgattcaggttgaaatattagcttt-gagcaagtgcagatccgatcaatgacaatg 44482753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 544
Target Start/End: Complemental strand, 27705025 - 27704979
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    ||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  27705025 cgtcttaatgcagtgtttatttgattcaagttgaaagattagttttt 27704979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 497 - 566
Target Start/End: Complemental strand, 32571804 - 32571736
Alignment:
Q  497 tcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    |||| ||| |||| ||||||||||||||||||| ||| ||||| |||||||||| ||||||||| |||||    
T  32571804 tcgttttaatgcgatgtttatttgattcaggttaaaaaattag-ttttgagcaaatgcagattcaatcaa 32571736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 536
Target Start/End: Complemental strand, 14627919 - 14627875
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 536  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||    
T  14627919 atttctcgtcttagtacggtgtttatttgattcatattgaaagat 14627875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 510 - 570
Target Start/End: Complemental strand, 14657794 - 14657735
Alignment:
Q  510 gtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||||||| |||||||||||   ||||||||| |||| ||||||||||||||    
T  14657794 gtgtttatttgattcagattgaaagatta-actttgagcaaatgcatattcgatcaatgac 14657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 538
Target Start/End: Complemental strand, 43256517 - 43256465
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||||||  |||||||||| ||||||||||||||||| ||||||| ||||    
T  43256517 ttttttattttccgtcttagtgaggtgtttatttgattcaagttgaaatatta 43256465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 5436048 - 5436104
Alignment:
Q  513 tttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||| ||||||||||| ||| ||||||| |||||||||||| || ||||||    
T  5436048 tttatttgattaaggttgaaagaatag-ttttgagaaagtgcagattcaatgaatgac 5436104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 567
Target Start/End: Original strand, 22493204 - 22493268
Alignment:
Q  502 ttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||||||| | ||||||||||||||||||||||||||   ||||||||||||  ||||| ||||||    
T  22493204 ttagtgcgatctttatttgattcaggttgaaagatta-actttgagcaagtgtggattcaatcaat 22493268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 506 - 569
Target Start/End: Original strand, 38273076 - 38273140
Alignment:
Q  506 tgcggtgtttatttgattcaggttgaaagatta-gtttttgagcaagtgcagattcgatcaatga 569  Q
    |||| ||||||||| |||||||||||||||||| ||||  |||||||| ||||| |||| |||||    
T  38273076 tgcgatgtttatttaattcaggttgaaagattaggtttgagagcaagttcagatccgataaatga 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 148; Significance: 8e-78; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 14585441 - 14585703
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||||||||||| |||||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  14585441 gaggggtgatttagagtcaattttgacccaaaaatcactcctctaaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 14585540  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||  ||| ||||| ||||||| |||||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  14585541 cttttgtttgtttttgtgatttcctcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgg 14585640  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||    
T  14585641 tgtttatttgattcaggttgaaagatcag-ctttgagcaagtgcagatccgatcaatgacaatg 14585703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 31462896 - 31462634
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  31462896 gaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgattttacatattttctgtttt 31462797  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||  ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||   ||||||||||||    
T  31462796 cttttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgactttgtgcggtgtgttttttatttacggtcttagtgcgg 31462697  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
     ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  31462696 cgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 31462634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 320 - 539
Target Start/End: Original strand, 11819062 - 11819290
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| |||||| | |||||||| ||||||||||||||||||| ||||||    
T  11819062 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccttaattgaataagtgatttcacatattttatgtttt 11819161  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||||||| ||||| |||||||||||||||| ||||| ||| ||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  11819162 ctttcatttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtctttgtgcggtgtgttttttatttcccgtcttagtgcgg 11819261  T
Q  511 tgtttatttgattcaggttgaaagattag 539  Q
    |||||||||||||||||||||||||||||    
T  11819262 tgtttatttgattcaggttgaaagattag 11819290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 323 - 574
Target Start/End: Original strand, 31270308 - 31270567
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||  ||||||||||||||||||||||         ||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||||||    
T  31270308 gggtgatttagggtcaattttgacccaaaaatcaccccttcgaattatttttccttctatcctaattgaataagtgatttcacatattttatgttttctt 31270407  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    || ||| ||||| | |||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||    
T  31270408 tcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgt 31270507  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| ||||||||||||||||||||  |||||||||||| |||| |||||||||||||||    
T  31270508 ttattcgattcaggttgaaagattag-ctttgagcaagtgtagatccgatcaatgacaatg 31270567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 321 - 574
Target Start/End: Complemental strand, 40884018 - 40883754
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttc-ttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||||||||||  ||||||||||||||||||||||         ||||||||||| || ||||||||||||| |||||||||||| |||||||||||||    
T  40884018 aggggtgatttagggtcaattttgacccaaaaatcatcaattcgaattgttttttccttttatcctaattgaataagtgatttcacttattttctgtttt 40883919  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctat--ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgc 508  Q
    ||||| ||| ||||| |||||||||||| ||| ||||| ||| |  |||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||    
T  40883918 ctttcgtttgtttttgtgatttcgtcgtttctgaacgactctctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgc 40883819  T
Q  509 ggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  40883818 ggtgtttctttgattcaggttgaaagattag-ttttgagcaagtgcagatccgatcaatgacaatg 40883754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 357 - 574
Target Start/End: Original strand, 22484990 - 22485206
Alignment:
Q  357 attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| |||||||||| ||| | ||||| ||| |||    
T  22484990 attgtttttccttctatcctaattgaataagtgatttcgcatattttctgttttctttcgtttgtttttgtgatttcgtcatctttgaacgactctgttt 22485089  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    |||||||||| ||| ||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  22485090 gttttgatttcccgtctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcag 22485188  T
Q  557 attcgatcaatgacaatg 574  Q
    || || ||||||||||||    
T  22485189 atccggtcaatgacaatg 22485206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 48652543 - 48652328
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| | | ||||    
T  48652543 ttgtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttg 48652444  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||   ||||| |||| |||||    
T  48652443 ttttgattttccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgatttaggttgaaagatta-actttgaacaagagcaga 48652345  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||| ||||    
T  48652344 tccgatcaatgaaaatg 48652328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 3456922 - 3457180
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||| ||||||||||         ||||||||| ||||||||||||||||| ||||||||| ||||||||| ||||||    
T  3456922 gaggggtgatttatggtcaattttgatccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttaacatattttttgtttt 3457021  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||||||||| ||||    ||||||||| ||| ||||||| ||||||||||||||||| ||||||||| |||    
T  3457022 ctttcctttgtttttgtgatttcgtcgtctctaaacgactcta----ttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtacgg 3457117  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||| |||||||||||||  |||||||||||||| || |||||||||||||||    
T  3457118 tgtttatttgattcaagttgaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatg 3457180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 324 - 574
Target Start/End: Complemental strand, 40013421 - 40013160
Alignment:
Q  324 ggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcct---aattgaacaagtgatttcacatattttctgttttc 411  Q
    |||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||   ||||||| |||||||||||||||||||||||||||    
T  40013421 ggtgatttagtgtcaattttgacccaaaaatcacccattcgaattgtttttccttctatcctcctaattgaataagtgatttcacatattttctgttttc 40013322  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| |||||||||||||||| ||| | ||  ||||||||||||| ||| ||||| | ||||||||||| ||||| | ||||||||||||    
T  40013321 tttcgtttgtttttgtgatttcgtcgtctctgaacaactccgtttgttttgatttaccgtctttgcgcggtgtgtttttgatttcccatcttagtgcggt 40013222  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  40013221 gtttatttgattcaggttgaaagattag-ctttgagcaagtgcagattcaatcaatgacaatg 40013160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 356 - 575
Target Start/End: Complemental strand, 36624799 - 36624582
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||| ||||| ||| ||    
T  36624799 aattgtttttccttctatcctaactaaataagtgatttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 36624700  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
     |||||||||| ||| |||||||  |||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  36624699 -gttttgatttcccgtctttgtgcagtgtctttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttaagcaagtgca 36624602  T
Q  556 gattcgatcaatgacaatgg 575  Q
    ||| ||||||||||||||||    
T  36624601 gatccgatcaatgacaatgg 36624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 36691949 - 36691687
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          || ||||| ||||||||||||||||| |||||||||||||||||||||||||     
T  36691949 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttatttttccttctatcctaattgaataagtgatttcacatattttctgtttc 36691850  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| | | ||||||||||||| ||| |||| || ||||||||||||||||  ||||||||| |||    
T  36691849 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcggtgtgttttttattttccgtcttagtacgg 36691750  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||| |||||||||||||||   |||| ||||||||| ||||||||||||||||||    
T  36691749 tgtttatttgatccaggttgaaagatta-actttgcgcaagtgcatattcgatcaatgacaatg 36691687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 54239123 - 54238908
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||  | ||||| | | ||    
T  54239123 aattgtttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtcgatgaacgactttgtt 54239024  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| |||  |||||| ||||||||||| ||||| |||||||||||||||  |||||||||||||||||||||||||  ||||||||||||||    
T  54239023 tgttttgatttcccgtgtttgtgcggtgtgtttttgatttcccgtcttagtgcggtg--tatttgattcaggttgaaagattag-atttgagcaagtgca 54238927  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  54238926 tatccgatcaatgacaatg 54238908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 35174728 - 35174949
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  35174728 aattgtttttccttctatcctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 35174827  T
Q  456 tgttttgattttccgcc----tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    ||||||||||| ||  |    |||||| | |||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  35174828 tgttttgatttcccatctttatttgtgcgttgtgtttttgctttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaag 35174926  T
Q  552 tgcagattcgatcaatgacaatg 574  Q
    |||| ||| ||||||||||||||    
T  35174927 tgcatatttgatcaatgacaatg 35174949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 49628192 - 49627983
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||         | ||    
T  49628192 aattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctt--------tgtt 49628101  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||||||| |||| || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||    
T  49628100 tgttttgattttccgtctttatgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattagctttt-agcaagtgca 49628002  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  49628001 gatccgatcaatgacaatg 49627983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 33637429 - 33637644
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||  ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||    
T  33637429 ttgtttttccttctaccttaattgaataaaagatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctaaacgactttgtttg 33637528  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||  ||||| |||  |||||    
T  33637529 ttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgatttaggttgaaagattag-ctttgaacaaaagcaga 33637627  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||| ||||    
T  33637628 tccgatcaatgaaaatg 33637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 53155580 - 53155318
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||| |||||||||| || ||||||||||||||||||| ||||||    
T  53155580 gaggggtgatttagggtcaattttgacccaaaaatcacccattcgaattgtttttccttatatcctaattcaataagtgatttcacatattttatgtttt 53155481  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| | |||||||||| | | ||||| ||| |||||||| |||| ||| |||||||||||| |||||| ||||  ||||||||||| |    
T  53155480 ctttcgtttgtttttgtaatttcgtcgtatttgaacgactctgtttgttttaatttcccgtctttgtgtggtgcgtttttgattttccgtcttagtgcag 53155381  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  53155380 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatg 53155318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 388 - 574
Target Start/End: Original strand, 55454922 - 55455106
Alignment:
Q  388 tgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtt 487  Q
    |||||||||||||||| | ||||||||| ||| ||||| |||| ||||||||||||||||| ||| ||||||||||||| ||  ||||||| ||||||||    
T  55454922 tgatttcacatattttttattttctttcgtttgtttttgtgatatcgtcgtctctaaacgactctgtttgttttgatttcccttctttgtgcggtgtgtt 55455021  T
Q  488 ttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  55455022 ttttatttc-cgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 55455106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 30156431 - 30156169
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||  ||| ||||||||||||| ||||||||||||||||||| || |||    
T  30156431 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgttttc-cttttatcctaattgaataagtgatttcacatattttatgattt 30156333  T
Q  411 ctttcattta-tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcg 509  Q
    ||||| |||  |||||||||||||||| ||||| ||||| | | ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||    
T  30156332 ctttcgttttgtttttatgatttcgtcttctctgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcg 30156233  T
Q  510 gtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||| |||||||| |||||  ||||||||||| ||||| |||||||| ||||||    
T  30156232 gtgtttatttgattctggttgaaaaattag-ctttgagcaagttcagatccgatcaataacaatg 30156169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 32080857 - 32080642
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| | ||||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| ||||| ||| ||||    
T  32080857 ttgtttttccttctaccttaattgaataggtgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttg 32080758  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || |||||||  |||||||||| |||||||||| ||||||| |||||||||||||||| ||||| ||||||  ||||| |||| |||||    
T  32080757 ttttgatttcacgtctttgtgcagtgtgtttttgatttctcgtcatagtgcgatgtttatttgattcagcttgaatgattag-ctttgaacaagagcaga 32080659  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  32080658 tccgatcaatgacaatg 32080642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 367 - 574
Target Start/End: Original strand, 39610247 - 39610451
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||| ||| ||||| |||||| ||||||| | || || ||| |||||||||||||    
T  39610247 cttctatcctaattgaataagtgatttcacatattttttgtttcctttcgtttgtttttgtgattttgtcgtctttgaatgactctgtttgttttgattt 39610346  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||||||  ||| ||||||||||||||| || ||||||||||||| || ||||||||||||  ||||||||||||||||| |||||||    
T  39610347 cccgtctttgtgcggtgtg--tttgatttctcgtcttagtacgttgtttatttgatttagattgaaagattag-ctttgagcaagtgcagatccgatcaa 39610443  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  39610444 tgacaatg 39610451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 1075043 - 1074782
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| ||| ||| ||||||||| |||||||| ||||  |||||||||||    
T  1075043 gaggggtgatttatggtcaattttgacccaaaaatcacccatccgagttgtttttccttatattctaattgaataagtgatt-cacacgttttctgtttt 1074945  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||  |||||| ||||||||| ||||| ||| ||| ||||||||||||| ||||||| ||||||||||| ||||| ||||||||||  |    
T  1074944 ctttcgtttgttttcgtgattttgtcgtctcttaacgactctgtttcttttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgtag 1074845  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    || |||||||||||| |||||||||||||  |||||||||||||| || |||||||||||||||    
T  1074844 tgattatttgattcaagttgaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatg 1074782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 358 - 570
Target Start/End: Complemental strand, 106139 - 105927
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgattt-cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||  ||||| ||||||| || ||||||||| ||||||||||  |||||||||| ||| ||||| |||||| |||||||||  |||| ||| |||    
T  106139 ttgtttttcattctaccctaattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgcacgactctgttt 106040  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
     ||||||||||||| ||||||| | ||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||  ||||||||||||||     
T  106039 attttgattttccgtctttgtgcgatgtgttttttatttcccgtcttagtgtcgtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaa 105941  T
Q  557 attcgatcaatgac 570  Q
    || |||||||||||    
T  105940 atccgatcaatgac 105927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 376 - 574
Target Start/End: Complemental strand, 19861365 - 19861167
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttcttt-catttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctt 474  Q
    |||||||| |||||||||||||||||| ||||||| ||| | ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||   || |||    
T  19861365 taattgaataagtgatttcacatatttcctgtttttttttcgtttgtttttgtgatttcgtcgtctcttaacgactctgtttgttttgattcctcgtctt 19861266  T
Q  475 tgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||  ||||||||||  |||||| |||||||||||||||| ||||   |||||||||||||| ||||||||||||||||||    
T  19861265 tgtgtggtgtgttttttatttccagtcttagtgcaatgtttacttgattcaggttgaaatatta-actttgagcaagtgcatattcgatcaatgacaatg 19861167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 24483783 - 24483567
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  ||||||| |||||||| ||||||||||||||||||||||||||| | ||||| ||||| |||||| ||||||||| ||||| ||| ||    
T  24483783 aattgtttttcattctatcataattgaataagtgatttcacatattttctgttttcatacatttgtttttgtgattttgtcgtctctgaacgactctgtt 24483684  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    || |||||||||||  ||||||  ||||||||||||||||  | ||||||||||   |||| |||||| ||||||||| |||||  ||||||||||||||    
T  24483683 tg-tttgattttccatctttgtacggtgtgttttttattttccatcttagtgcgacatttacttgatttaggttgaaatattag-ctttgagcaagtgca 24483586  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  24483585 gatccgatcaatgacaatg 24483567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 399 - 574
Target Start/End: Original strand, 53402688 - 53402862
Alignment:
Q  399 attttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctc 498  Q
    |||||||| |||||||| ||| ||||| ||||||| |||||||| ||||| | | ||||||||||||| ||| ||||||| | ||||||||| ||||| |    
T  53402688 attttctgctttctttcgtttgtttttgtgatttcatcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttccc 53402787  T
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| |||||||||||||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  53402788 gtcttagtgcgctgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatg 53402862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 358 - 523
Target Start/End: Complemental strand, 55090686 - 55090521
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | ||||| || ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||||| | | ||||    
T  55090686 ttgtttttccttctaccttaattaaataagtgatttcacatattttctgttttctttcatttgtttttgtgattccgtcgtctctgaacgactttgtttg 55090587  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgatt 523  Q
    ||||||||| | | ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||    
T  55090586 ttttgatttcctgtctttgtgcggtgtgtttttgatttcccatcttagtgcggtgtttatttgatt 55090521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 361 - 478
Target Start/End: Complemental strand, 41868394 - 41868277
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||  |||| |||||||||||||||||||||| |||||||||||    
T  41868394 tttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgcttttgtgatttcgtcgtctctaaacgactctatttgttt 41868295  T
Q  461 tgattttccgcctttgtg 478  Q
    |||||||||| |||||||    
T  41868294 tgattttccgtctttgtg 41868277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 421 - 574
Target Start/End: Original strand, 48854966 - 48855118
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttg 520  Q
    ||||| |||| ||||||||||| ||||| ||| | ||||||||||||||| ||||||| |||| |||||||||||  |||||||||| ||||||||||||    
T  48854966 tttttgtgatatcgtcgtctctgaacgactctgtatgttttgattttccgtctttgtgcggtgcgttttttattttccgtcttagtgtggtgtttatttg 48855065  T
Q  521 attcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| |||||||||||||  ||||||||||||||||| |||||||||||||||    
T  48855066 attcatgttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 48855118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 320 - 571
Target Start/End: Complemental strand, 27189544 - 27189295
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||||||||||| |||||||||||| |||||||| |         ||||||||| ||||||||||||||||| |||| |||||||||| ||||||||||    
T  27189544 gaggggtgatttagagtcaattttgatccaaaaattactcttccgaattgtttttccttctatcctaattgaataagtaatttcacataatttctgtttt 27189445  T
Q  411 cttt-catttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtt-ttttatttctcgtcttagtgc 508  Q
     ||| ||||| ||||| ||||||| |||||| |            || ||||||||||||| ||||||| |||||||| ||||||||| |||||| ||||    
T  27189444 tttttcatttgtttttgtgatttcatcgtctgt------------ttattttgattttccgtctttgtgcggtgtgttattttatttcccgtcttggtgc 27189357  T
Q  509 ggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||||||| |||||||||||||||||||  |||||||||||| ||||  |||||||||||    
T  27189356 ggtgtttattttattcaggttgaaagattag-ctttgagcaagtgtagatctgatcaatgaca 27189295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 356 - 513
Target Start/End: Original strand, 38527287 - 38527444
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||| |||||||| || |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| || || ||| ||    
T  38527287 aattgtttttccttctatcttaattgaataaatgatttcacatattttctgttttctttcgtttgtttttatgatttcgtcgtctctgaatgactctgtt 38527386  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    ||||||||||| ||| ||||||| |  || ||||| ||||  |||||||||| |||||    
T  38527387 tgttttgatttcccgtctttgtgcgacgtatttttgattttccgtcttagtgtggtgt 38527444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 368 - 523
Target Start/End: Original strand, 2147762 - 2147918
Alignment:
Q  368 ttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    |||||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||  |||| ||| |||||||||||||    
T  2147762 ttctatcctaattgaataagtgatttccacatattttcagttttctttcatttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgattt 2147861  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgatt 523  Q
      || ||||| |  |||||||||| |||||||||||| ||||||||| | |||||||    
T  2147862 ctcgtctttgagcagtgtgtttttgatttctcgtctttgtgcggtgtgtttttgatt 2147918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 458 - 574
Target Start/End: Original strand, 45047640 - 45047755
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||| |||||||| ||||||| ||||||||||| ||||||| | |||||||||||||||||| |||||| |||||||||||| |||| ||||||||||||    
T  45047640 tttttattttccgtctttgtgcggtgtgtttttgatttctcattttagtgcggtgtttattttattcagattgaaagattagctttt-agcaagtgcaga 45047738  T
Q  558 ttcgatcaatgacaatg 574  Q
    |||||||||||||||||    
T  45047739 ttcgatcaatgacaatg 45047755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 376 - 558
Target Start/End: Original strand, 3312487 - 3312669
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt 475  Q
    |||||||| |||||||||||||||||||  |||||||||| ||| ||||| | ||||| || |||||  |||| ||  ||| ||||||||| | | ||||    
T  3312487 taattgaataagtgatttcacatattttaagttttctttcgtttgtttttgttatttcatcatctctgcacgactcagtttcttttgatttccagtcttt 3312586  T
Q  476 gtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    ||||||||| |||||| ||||||||||||  |||||||||||||||||||||||||||| |||||  |||||||||||| ||||    
T  3312587 gtgtggtgttttttttaatttctcgtcttcttgcggtgtttatttgattcaggttgaaatattag-ctttgagcaagtgtagat 3312669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 472 - 575
Target Start/End: Complemental strand, 54706704 - 54706602
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||    
T  54706704 ctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-cctttgagcaagtgcagatccgatcaatgaca 54706606  T
Q  572 atgg 575  Q
    ||||    
T  54706605 atgg 54706602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 394 - 570
Target Start/End: Complemental strand, 3961830 - 3961654
Alignment:
Q  394 cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttat 493  Q
    ||||||||||| || || |||| ||| ||||||||||| |||||| | |  |||| ||| |||||||||||||  || ||||||||| ||||||||||||    
T  3961830 cacatattttcagtattatttcgtttgtttttatgattacgtcgtttttgtacgactctgtttgttttgatttatcgtctttgtgtgatgtgttttttat 3961731  T
Q  494 ttct-cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    || | ||||||||||||||||||||||||||||||||| |||||||   ||||||||| || |||||| |||||||||    
T  3961730 ttttccgtcttagtgcggtgtttatttgattcaggttgtaagatta-actttgagcaaatgtagattcaatcaatgac 3961654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 356 - 466
Target Start/End: Original strand, 19645245 - 19645355
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||||||||| |||||||| || |||||||||||||||||||||||||| |||| ||| ||||| ||||| |||||||||| ||||| ||| ||    
T  19645245 aattgttttttcttctgtcctaattaaataagtgatttcacatattttctgttttttttcctttgtttttgtgattacgtcgtctctgaacgactctgtt 19645344  T
Q  456 tgttttgattt 466  Q
    |||||||||||    
T  19645345 tgttttgattt 19645355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 320 - 519
Target Start/End: Complemental strand, 34961008 - 34960807
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||||||| |||  ||||||||||||||||||||||         ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||||    
T  34961008 gaggggtgacttagggtcaattttgacccaaaaatcacccctcagaattgttttttcttctattctaattgaataagtgatttcacatattttatgtttt 34960909  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| ||||||| ||||||    |||| |   |||||||||||||  || ||||||| ||||| | ||| |||||  ||||||||||||    
T  34960908 ctttcgtttgtttttgtgatttcatcgtct----acgact---tttgttttgatttctcgtctttgtgcggtgtttatttgatttcctgtcttagtgcgg 34960816  T
Q  511 tgtttattt 519  Q
    |||||||||    
T  34960815 tgtttattt 34960807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 356 - 519
Target Start/End: Complemental strand, 4206616 - 4206456
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| | | ||||||||||||| ||||| ||||||||||||| | ||||||||  ||| ||||| |||||||||||||||| |||||  || ||    
T  4206616 aattgtttttccatatatcctaattgaataagtgttttcacatattttttattttcttttgtttgtttttgtgatttcgtcgtctctgaacga--ctgtt 4206519  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttattt 519  Q
    | |||| |||| | | ||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  4206518 t-tttttatttcctgtctttgtgcggtgtgtttttgatttctcatcttagtgcggtgtttattt 4206456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 47733866 - 47733769
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||| |||| |||||||||    
T  47733866 ctttgtgcggtatattttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaatattag-ttttgagcaaatgcatattcaatcaatgac 47733769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 320 - 466
Target Start/End: Complemental strand, 13702122 - 13701967
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||||||||| |||         ||| |||||  ||||||| |||||||| ||||||||||||||||||||||||||    
T  13702122 gaggggtgatttagggtcaattttgacccaaaagtcaccccttcgaattatttttctttctatcataattgaataagtgatttcacatattttctgtttt 13702023  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||| ||||| |||||||||||||  | ||| | ||| |||||||||||||    
T  13702022 ctttcatttgtttttgtgatttcgtcgtcattgaacaactctgtttgttttgattt 13701967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 385 - 569
Target Start/End: Complemental strand, 25135390 - 25135204
Alignment:
Q  385 aagtgatttca-catattttctgttttctttcatttatttttatgatttcgtcgtctctaaac--gaatctatttgttttgattttccgcctttgtgtgg 481  Q
    ||||||||||| |||  |||| ||||| |||| || |||||| |||||||||||||| |   |  ||||||||||||||||||||  |  |||||||||     
T  25135390 aagtgatttcaacatgctttccgttttatttcgttgatttttgtgatttcgtcgtcttttttcatgaatctatttgttttgatttctcatctttgtgtga 25135291  T
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||||||||||| || ||||||||| |||||||| ||||||| ||||||| |||||  |||||||||||||| | || ||||||||    
T  25135290 tgtgttttttatttttcatcttagtgcagtgtttatctgattcaagttgaaatattag-atttgagcaagtgcaaaatcaatcaatga 25135204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 48400878 - 48401009
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| |||||| |||| || || ||||||||||||||||||| ||||||    
T  48400878 gaggggtgatttagggtcaattttgacccaaaaatcacacatcggaattgtttttccttctaccctattttaataagtgatttcacatattttttgtttt 48400977  T
Q  411 ctttcatttatttttatgatttcgtcgtctct 442  Q
    ||||| ||| ||||| ||||||||||||||||    
T  48400978 ctttcgtttgtttttgtgatttcgtcgtctct 48401009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 421 - 558
Target Start/End: Original strand, 53962206 - 53962343
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttattt 519  Q
    ||||| |||||||||| ||| |  ||||  || |||| |||||||||||| ||| ||| ||| ||||| || ||||| ||||||||||||||||||||||    
T  53962206 tttttgtgatttcgtcatctttgcacgaccctttttgatttgattttccgtcttcgtgcggtttgtttgttgatttcccgtcttagtgcggtgtttattt 53962305  T
Q  520 gattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    |||||||||| |||||||||  |||||||||||||||||    
T  53962306 gattcaggttaaaagattag-ctttgagcaagtgcagat 53962343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 356 - 570
Target Start/End: Complemental strand, 39429606 - 39429393
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttc-acatatttt-ctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta 453  Q
    |||||||||| ||||| | ||||||||||||||| |||| |||| |||| | || ||||||| ||| ||||| ||||||||||||||||  |||| |||     
T  39429606 aattgtttttccttcttttctaattgaacaagtgctttccacatgtttttcagtcttctttcgtttgtttttttgatttcgtcgtctctgcacgactctg 39429507  T
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    |||||||| ||||   | |||  ||||  |||||||| ||||| | |||||||| ||||||||||| ||| |||||||||||||||  | ||||||||||    
T  39429506 tttgttttaatttcttgtctt--tgtgcagtgtttttgatttcccatcttagtgtggtgtttatttaatttaggttgaaagattag-ctctgagcaagtg 39429410  T
Q  554 cagattcgatcaatgac 570  Q
    || || | |||||||||    
T  39429409 caaatccaatcaatgac 39429393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 492 - 574
Target Start/End: Complemental strand, 34103716 - 34103636
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||||||   |||||||||||||||| |||||||||||||||    
T  34103716 atttcccgttttagtgcggtgtttatttgattcaggtcgaaagattag--attgagcaagtgcagatccgatcaatgacaatg 34103636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 574
Target Start/End: Original strand, 48401029 - 48401103
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| ||||||||||||||||||||||||| |||||||||  ||||||||||||||||| |||||||||||||||    
T  48401029 gtctttgtgcggtgtttatttgattcaggttaaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 48401103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 574
Target Start/End: Complemental strand, 41868286 - 41868211
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||| |||||| || | ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  41868286 cgtctttgtgcggcgtatttttgattcaggttgaaagattagtttt-gagcaagtgcagatccgatcaatgacaatg 41868211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 13701975 - 13701889
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||| ||||||||||||||||||||||| |||||||||||||  |||||||||||||| ||  ||||||||||||||    
T  13701975 ttttgatttcccgtcctagtgcggtgtttatttgattcaagttgaaagattag-ctttgagcaagtgcaaatctgatcaatgacaatg 13701889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 19645347 - 19645432
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| ||||||||||||| | | |||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||    
T  19645347 ttttgatttcccgtcttagtgcggagct-atttgattcaggttgaaagattagcttt-gagcaagtgcagatccgatcaatgacaatg 19645432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 439
Target Start/End: Complemental strand, 34103802 - 34103739
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtc 439  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  34103802 taattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 34103739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 538
Target Start/End: Complemental strand, 40401550 - 40401424
Alignment:
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||||||||||||||||||| |||| ||||||| | | |||| ||| ||||  || ||||||  ||||||||||||||||  ||||||||  |  |    
T  40401550 tttcgtttatttttatgatttcgtagtctttaaacgactttgtttgatttaatttctcgtctttgtacggtgtgttttttattttccgtcttagaacaat 40401451  T
Q  512 gtttatttgattcaggttgaaagatta 538  Q
    |||||||||||||||||||||| ||||    
T  40401450 gtttatttgattcaggttgaaatatta 40401424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 566298 - 566385
Alignment:
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||| || ||||| |||| ||||||||||||||||||||||||| ||| |||| | ||| ||||||||| |||||||||    
T  566298 tgtgttttttatttgtcttcttaatgcgttgtttatttgattcaggttgaaagactagctttt-atcaattgcagattcaatcaatgac 566385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 55446223 - 55446298
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||  ||||||||||||||||| | |||||||||||||    
T  55446223 cgtcttagtgcggggtttatttgattcagattgaaggattag-ctttgagcaagtgcagatccaatcaatgacaatg 55446298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 458 - 537
Target Start/End: Complemental strand, 42168016 - 42167937
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatt 537  Q
    |||||||||| || || |||| | || |||||||||||||| |||||||| |||||||||||||||||| ||||||||||    
T  42168016 ttttgatttttcgtctctgtgcgatgagttttttatttctcatcttagtgtggtgtttatttgattcagattgaaagatt 42167937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 452 - 570
Target Start/End: Original strand, 48212459 - 48212577
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgtttttta-tttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaa 550  Q
    ||||||||||||||| ||  |||| ||  |||||||||||  |||||||||||||||| ||||||||| ||||||| ||||| ||||||  | |||||||    
T  48212459 tatttgttttgatttcccttctttatgcagtgtgtttttttctttctcgtcttagtgcagtgtttattagattcagattgaaggattag-ctctgagcaa 48212557  T
Q  551 gtgcagattcgatcaatgac 570  Q
    |||||||| | |||||||||    
T  48212558 gtgcagatccaatcaatgac 48212577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 570
Target Start/End: Original strand, 2147882 - 2147993
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctc-gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    |||||||||  || ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||  |||| ||||||| | |||||||||||| ||    
T  2147882 ttttgatttctcgtctttgtgcggtgtgtttttgatttccccgtcttagtgcggtgtttatttgattcgagttg-aagatta-tctttgagcaagtgtag 2147979  T
Q  557 attcgatcaatgac 570  Q
    ||  ||||||||||    
T  2147980 atctgatcaatgac 2147993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 459 - 540
Target Start/End: Original strand, 37451865 - 37451946
Alignment:
Q  459 tttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagt 540  Q
    |||||||| ||  ||||||| |||||| |||| ||||  | |||||||||||||||||||||||||||||||||| ||||||    
T  37451865 tttgatttcccatctttgtgcggtgtgcttttgattttccatcttagtgcggtgtttatttgattcaggttgaaaaattagt 37451946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 4219239 - 4219288
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtct 440  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||||||||    
T  4219239 tttcacatattttcagttttctttcgtttgtttttatgatttcgtcgtct 4219288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 569
Target Start/End: Original strand, 53293192 - 53293308
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagt---ttttgagcaa 550  Q
    |||| |||||||||||| ||  |||||||||||| |  ||||||||| ||||||  |||||||||| |||||  |||||||||||||   |||||| |||    
T  53293192 tttggtttgattttccgtct--gtgtggtgtgttctcgatttctcgtattagtgtagtgtttattttattcaacttgaaagattagttagttttgatcaa 53293289  T
Q  551 gtgcagattcgatcaatga 569  Q
    ||||| |||| ||||||||    
T  53293290 gtgcatattcaatcaatga 53293308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 424
Target Start/End: Complemental strand, 4817935 - 4817867
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttt 424  Q
    ||||||||||  || ||||||||||||| | ||||||||||||||||||| ||||||||| ||| ||||    
T  4817935 aattgtttttctttttatcctaattgaataggtgatttcacatattttctattttctttcgtttgtttt 4817867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 511 - 567
Target Start/End: Complemental strand, 20044798 - 20044743
Alignment:
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||    
T  20044798 tgtttatttgattcaggttggaagattag-ttttgagcaagtgcatattcaatcaat 20044743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 483 - 543
Target Start/End: Complemental strand, 32408788 - 32408728
Alignment:
Q  483 gtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||||||| |||||  |||| ||| ||||||||||||||||| ||||||||||||||||||    
T  32408788 gtgtttttgatttcctgtctcagtacggtgtttatttgattcgggttgaaagattagtttt 32408728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 533
Target Start/End: Original strand, 534103 - 534178
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaa 533  Q
    |||||||||  || ||||||| ||||||||||||||||||| |||| || || | ||||||||||||| |||||||    
T  534103 ttttgatttctcgtctttgtgcggtgtgttttttatttctcatctttgtacgatatttatttgattcaagttgaaa 534178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 454 - 521
Target Start/End: Complemental strand, 4817874 - 4817807
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttga 521  Q
    ||||||||||||| ||| |||||||  ||||||||||||||||   ||||||||| ||||||||||||    
T  4817874 tttgttttgatttcccgtctttgtgcagtgtgttttttatttcctctcttagtgcagtgtttatttga 4817807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 543
Target Start/End: Complemental strand, 5327553 - 5327391
Alignment:
Q  385 aagtgatt-tcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtg 483  Q
    |||||||| ||||| |||||| |||||||||| ||| ||||| ||||||||| ||||   | | | | | ||| ||||||||||||| ||||||| ||||    
T  5327553 aagtgattatcacaaattttcagttttctttcgtttgtttttgtgatttcgttgtctagca-caactttgtttattttgattttccgtctttgtgcggtg 5327455  T
Q  484 tgttttttatttctcgtcttagtg----cggtgtttatttgattcaggttgaaagattagtttt 543  Q
    || |||| ||||    ||||| ||    ||||||||||||||||||||||||||||||| ||||    
T  5327454 tgcttttgattttctatcttaatgtgggcggtgtttatttgattcaggttgaaagattaatttt 5327391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 483 - 535
Target Start/End: Original strand, 26318713 - 26318765
Alignment:
Q  483 gtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaaga 535  Q
    ||||||||||||| |||| ||||||||| |||| ||||||||||||| |||||    
T  26318713 gtgttttttatttttcgttttagtgcggcgtttgtttgattcaggttcaaaga 26318765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 531
Target Start/End: Original strand, 40702544 - 40702648
Alignment:
Q  427 tgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcag 526  Q
    ||||||| |||||| |  |||| |||||||||||||| ||  || |||||||   |||| |||| ||||  ||| ||||||| |||||||||||||||||    
T  40702544 tgatttcatcgtctttgcacgattctatttgttttgacttcacgtctttgtgcaatgtgattttgattttccgttttagtgcagtgtttatttgattcag 40702643  T
Q  527 gttga 531  Q
    |||||    
T  40702644 gttga 40702648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 542
Target Start/End: Original strand, 7117799 - 7117869
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttt 542  Q
    ||||||||||| ||||||  ||||| | ||||||||| |||||||||||||| | ||| ||| ||||||||    
T  7117799 ctttgtgtggtctgttttagatttcacatcttagtgcagtgtttatttgattaacgtttaaaaattagttt 7117869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 509
Target Start/End: Original strand, 7658272 - 7658329
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcg 509  Q
    ||||| ||||||||||||  ||||||| || ||||||||||||| || ||||||||||    
T  7658272 tatttattttgattttccttctttgtgcggcgtgttttttatttttcatcttagtgcg 7658329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 466
Target Start/End: Original strand, 24520714 - 24520771
Alignment:
Q  409 ttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||| ||||||||| |||||||||||||| |  |||| ||||||| |||||||||    
T  24520714 ttctttcgtttatttttgtgatttcgtcgtctttggacgactctatttattttgattt 24520771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 567
Target Start/End: Original strand, 31730811 - 31730878
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    ||||||||||  ||||||||||||||| ||||||||||||   ||||| |||||||| || ||||||||    
T  31730811 gtcttagtgcaatgtttatttgattcaagttgaaagatta-actttgaacaagtgcaaatccgatcaat 31730878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 487 - 523
Target Start/End: Complemental strand, 34960868 - 34960832
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgatt 523  Q
    |||| |||||||||||| |||||||||||||||||||    
T  34960868 ttttgatttctcgtctttgtgcggtgtttatttgatt 34960832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 499 - 574
Target Start/End: Original strand, 48401280 - 48401359
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttg-----aaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| ||||||||||||||| |||||||||      ||||||||| ||| |||||||||||||| |||||||||| ||||    
T  48401280 gtctttgtgcggtgtttatttaattcaggttaggttaaaagattagcttt-gagcaagtgcagatccgatcaatgataatg 48401359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 356 - 419
Target Start/End: Complemental strand, 54706774 - 54706710
Alignment:
Q  356 aattgttttttcttctat-cctaattgaacaagtgatttcacatattttctgttttctttcattt 419  Q
    |||||||||| ||| ||| || |||| || ||||||||||||||||||||| |||||||| ||||    
T  54706774 aattgtttttccttttattcccaattcaataagtgatttcacatattttctattttctttaattt 54706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Original strand, 54706777 - 54706813
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca 356  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  54706777 gaggggtaatttaaggtcaattttgacccaaaaatca 54706813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 5e-76; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 14600801 - 14600586
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||| |||||||||||||| | ||||| ||| ||||    
T  14600801 ttgttttttcttctatcctaattgaataactgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttg 14600702  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  14600701 ttttgatttcccgtctttgtgtggtttattttttatctctcgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 14600603  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  14600602 tccgatcaatgacaatg 14600586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 321 - 574
Target Start/End: Original strand, 41361712 - 41361973
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  ||||||||||||||||||||||          |||||||| |||||| | |||||||| |||||||||||||||||||||||||||    
T  41361712 aggggtgatttatggtcaattttgacccaaaaatcacccctccgatttgtttttccttctaccgtaattgaataagtgatttcacatattttctgttttc 41361811  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| |||||| ||||||||||||||| ||| ||||||||||||| ||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  41361812 tttcgtttgtttttgtgatttggtcgtctctaaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgttttagtgcggt 41361911  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||| |||||    
T  41361912 gtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgtcaatg 41361973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 31407898 - 31407636
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| |||||||| || ||||| || |||||||||||||||| ||||||    
T  31407898 gaggggtgatttagggtcaattttgacccaaaaatcatctctccgaattgtttttccttctatcatagttgaataaatgatttcacatattttttgtttt 31407799  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| | ||||||||| |||||  ||||||||||||    
T  31407798 ctttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttcctgtcttagtgcgg 31407699  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  31407698 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 31407636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 37612632 - 37612894
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||| ||||| ||||||||||| ||||| ||||||||||||||||||| | ||||    
T  37612632 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattttttttccttctatcctagttgaataagtgatttcacatattttttatttt 37612731  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||||||||||||| ||||||| |||| |||||||||||||| ||||| |||||||||||||    
T  37612732 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctatttgttttgtttttccgtctttatgtggtgtgtttttgatttcccgtcttagtgcgg 37612831  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||| |||||||||||||  ||||||||| ||||||| |||||||||||||||    
T  37612832 tgtttatttgattcaagttgaaagattag-ctttgagcaattgcagatccgatcaatgacaatg 37612894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 371 - 574
Target Start/End: Complemental strand, 7579945 - 7579743
Alignment:
Q  371 tatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccg 470  Q
    |||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| |||    
T  7579945 tatcttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccg 7579846  T
Q  471 cctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
     ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||| ||||||    
T  7579845 tctttgtgcgttgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgattaatgac 7579747  T
Q  571 aatg 574  Q
    ||||    
T  7579746 aatg 7579743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 37128591 - 37128375
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||| ||||| | |||||||||||||| ||||| ||||||    
T  37128591 aattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtaatttcgtcgtctctcaacgactctatt 37128492  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||||||  ||||||| |||||| |||| ||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  37128491 tgttttgattttccatctttgtgcggtgtg-ttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ttttgagcaagtgca 37128394  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||| ||||||    
T  37128393 gatccgatcaataacaatg 37128375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 323 - 574
Target Start/End: Original strand, 12329608 - 12329868
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    |||||||||| |||||||||||| ||||||||||         ||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  12329608 gggtgatttagagtcaattttgatccaaaaatcaccatttcgaattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctt 12329707  T
Q  414 tcattta-tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtg 512  Q
    || |||  ||||| |||||||||||||||| ||||| | | ||||||||||||| ||| ||||||| ||||||||||||||||| ||||||| |||||||    
T  12329708 tcgttttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttaatgcggtg 12329807  T
Q  513 tttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| ||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  12329808 tttatttgatttaggttgaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 12329868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 323 - 574
Target Start/End: Complemental strand, 10338969 - 10338710
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||| |||||||||||| |||||||||         ||||||||| ||| ||||||||||||| ||||||||||||||||||| |||||||||    
T  10338969 gggtgatttaaggtcaattttgacgcaaaaatcacccctccgaattgtttttccttttatcctaattgaataagtgatttcacatattttttgttttctt 10338870  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    || ||| ||||| |||||||||||||| | ||||| | | ||||||||||||| ||| ||||||||| ||||||||||||||| ||||||||||||||||    
T  10338869 tcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgatttcccgtctttgtgtgatgtgttttttatttcccgtcttagtgcggtgt 10338770  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||| ||||||| |||||  ||||||||||||||||| |||||||| ||||||    
T  10338769 ttatttgattcaagttgaaaaattag-ctttgagcaagtgcagatccgatcaataacaatg 10338710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 24791318 - 24791056
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||| |||||||||| || ||||||||| ||||||||||||||||    
T  24791318 gaggggtgatttatggtcaattttgacccaaaaatcatccatccgaattgtttttccttatatcctaattcaataagtgatttaacatattttctgtttt 24791219  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||  || ||||||| ||||||||||| ||||| |||||||||  ||    
T  24791218 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgtttttaatttcccgtcttagtttgg 24791119  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| ||||||||||||||||| ||||||||||||||| || |||||||||||||||    
T  24791118 tgtttatttgaatcaggttgaaagattag-ttttgagcaagtgcaaatccgatcaatgacaatg 24791056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 39067839 - 39067577
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||         ||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  39067839 gaggggtgatttaaggtcaattttgacccaaaaatcactgttccaaattgtttttccttctatcctaatttaataagtgatttcacatattttctgtttt 39067740  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||| | ||||| | | ||||||||||||| ||| |||| || | ||||||||||||||  |||||||||||||    
T  39067739 ctttcgtttgtttttgtgatttcgtcgtctttgaacgactatgtttgttttgatttcccgtctttatgcgttgtgttttttattttccgtcttagtgcgg 39067640  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||||| ||||| |||||||||    
T  39067639 tgtttattagattcatgttgaaagattag-ctttgagcaagtgcagatccgatcgatgacaatg 39067577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 2234575 - 2234358
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  2234575 aattgtttttccttctatcctagttgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 2234476  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||  ||||||| ||||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  2234475 tgttttgatttcccatctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaatattag-ctttgagcaagtgca 2234377  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||| ||||||    
T  2234376 gatccgatcaataacaatg 2234358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 358 - 572
Target Start/End: Original strand, 31308174 - 31308387
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||| ||| ||||    
T  31308174 ttgtttttccttctatcctaattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactctgtttg 31308273  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| ||| ||||| || ||||||||| ||||||||||||||| ||| |||||| ||||||||||    
T  31308274 ttttgatttcccgtctttgtgcggtgtgtttttgatttcccgttttagtacgatgtttatttaattcaggttgaaagaatag-ttttgaacaagtgcaga 31308372  T
Q  558 ttcgatcaatgacaa 572  Q
    | |||||||||||||    
T  31308373 tccgatcaatgacaa 31308387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 4757191 - 4757406
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| ||||| || || |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||| ||| ||||    
T  4757191 ttgtttttccttctatcataattaaataaatgatttcacatattttctgttttctttcatttctttttaagatttcgtcgtctctgaacgactctgtttg 4757290  T
Q  458 ttttgattttcc-gcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    |||| ||||||| | ||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||    
T  4757291 tttt-attttcctgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgagcaagtgcag 4757388  T
Q  557 attcgatcaatgacaatg 574  Q
    || |||||||||||||||    
T  4757389 atccgatcaatgacaatg 4757406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 30026983 - 30026770
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||    
T  30026983 ttgttttttcttctatcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttg 30026884  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| |||| || ||||||  ||| ||||| |||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||     
T  30026883 ttttgatttcccgtctttctgcggtgtg--tttgatttcccgtcttagtgcggtgtttatttgattcatgttgaaagattag-ctttgagcaagtgcagg 30026787  T
Q  558 ttcgatcaatgacaatg 574  Q
    |  ||||||||||||||    
T  30026786 tctgatcaatgacaatg 30026770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 356 - 572
Target Start/End: Original strand, 9501613 - 9501825
Alignment:
Q  356 aattgttttttc-ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||       
T  9501613 aattgttttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactc--- 9501709  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
     ||||||||||| ||| ||||||  ||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  |||||||||||||    
T  9501710 -tgttttgatttcccgtctttgtacggtttgttttttatttcccgtctttgtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgc 9501807  T
Q  555 agattcgatcaatgacaa 572  Q
    | || |||||||||||||    
T  9501808 aaatccgatcaatgacaa 9501825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 361 - 571
Target Start/End: Original strand, 24699861 - 24700070
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||  |||| | |||||||||||||| ||||| ||| |||||||    
T  24699861 ttttttcttatatcctaattaaataagtgatttcacatattttctgttttctttcatttgcttttgtaatttcgtcgtctctgaacgactctgtttgttt 24699960  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    | ||||||   ||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||   ||||||||| ||||||| |    
T  24699961 taattttctttctttgtgcggtgtgttttttatttcccgtgttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaaatgcagatcc 24700059  T
Q  561 gatcaatgaca 571  Q
    |||||||||||    
T  24700060 gatcaatgaca 24700070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 323 - 574
Target Start/End: Original strand, 31202440 - 31202699
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||| ||||||||||||||||||||||         |||||||||  ||||||  |||||||| |||||||||||||||||||||||||| ||    
T  31202440 gggtgatttaaggtcaattttgacccaaaaatcatccatccaaattgtttttctttctattataattgaataagtgatttcacatattttctgttttgtt 31202539  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    || ||| ||||| |||||||||||||||| ||| | ||||||||||||||||| ||| ||||||  ||||||||||| |||||  |||||||||| ||||    
T  31202540 tcgtttgtttttgtgatttcgtcgtctctgaacaactctatttgttttgatttcccgtctttgtacggtgtgtttttgatttccagtcttagtgcagtgt 31202639  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||   ||||| |||||||||||  ||||||||||||||    
T  31202640 ttatttgattcaggttgaaagatta-actttgatcaagtgcagatctgatcaatgacaatg 31202699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 361 - 574
Target Start/End: Original strand, 10147976 - 10148186
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||||  ||||  ||||||||||||||| ||| |||||||    
T  10147976 ttttttcttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttgtttttgagattatgtcgtctctaaacgactctgtttgttt 10148075  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    ||||||  || ||||||| ||||||  ||| ||||||| ||||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||| |    
T  10148076 tgatttctcgtctttgtgcggtgtg--tttgatttctcatcttagtacggtgtttatttgattcaggttgaaaaattag-ctttgagcaagtgcagatcc 10148172  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  10148173 gatcaatgacaatg 10148186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 1810369 - 1810110
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca--------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    |||||||||||||  ||||||||||||||||||||||        ||| |||||||||||||||||||| || |||||||||||||| ||||||| ||||    
T  1810369 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttttttttcttctatcctaattcaataagtgatttcacattttttctgatttc 1810270  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| ||||||| |||| ||| |||||  || ||||||||| ||| ||| |||| || ||||||||||| || || |||||||| ||| |    
T  1810269 tttcgtttgtttttgtgatttcctcgtatctgaacga--ctgtttgttttggtttcccgtctttatgcggtgtgtttttgatgtcccgtcttagcgcgat 1810172  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||| ||||||||||||| | || |||||||||||||||    
T  1810171 gtttatttgattcaggttgaaagattag-ttttgagcaagtgtaaatccgatcaatgacaatg 1810110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 356 - 539
Target Start/End: Complemental strand, 1039998 - 1039816
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||| |||| ||||||| |||||| || |||||||||||||||||||||| |||||||||||| ||||  |||||| ||||||||| ||||| ||||||    
T  1039998 aattggttttccttctattctaattcaataagtgatttcacatattttctgctttctttcatttgttttg-tgattttgtcgtctctgaacgactctatt 1039900  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||||  || ||||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  1039899 tgttttgatttctcgtctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgatccaggttgaaagattag 1039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 368 - 539
Target Start/End: Original strand, 22787528 - 22787699
Alignment:
Q  368 ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgatttt 467  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||| ||| ||||| ||||| |||||| ||| ||||| ||| |||||||||||||     
T  22787528 ttctatcctagttgaataagtgatttaacatattttctgttttctttcgtttgtttttgtgattccgtcgtttctgaacgactctgtttgttttgatttc 22787627  T
Q  468 ccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
        ||||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  22787628 ttatctttgtgcggtgtgtttttgattttccgtcttagtgcggtgtttatttgattcaggttgaaagattag 22787699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 11161908 - 11162124
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||||  || ||||||||||||| |||| ||||||||| ||||| |||||||||| ||| ||||| |||||||||||||||   |||| |||  ||     
T  11161908 ttgtttttctttatatcctaattgaataagtcatttcacatcttttcagttttctttcgtttgtttttgtgatttcgtcgtctccgcacgactctgcttt 11162007  T
Q  458 ttttgattttccgcctttgtgtggtgtg-ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    |||| |||| ||| ||||||| |||||| ||||||||||| ||||  ||||||||||||||||||||||||||||||||||||  ||||||||||||||     
T  11162008 tttttatttcccgtctttgtgcggtgtgtttttttatttcccgtcgcagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcat 11162106  T
Q  557 attcgatcaatgacaatg 574  Q
    ||  ||||||||||||||    
T  11162107 atctgatcaatgacaatg 11162124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 2025312 - 2025112
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||| ||| ||||||||| |||||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||| ||||| ||| ||||    
T  2025312 ttgtttttccttttattctaattgaataagtgatttcacatgttttctgttttatttcgtttatttttgtgatttcgtcgtctctgaacgattctgtttg 2025213  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||| || ||||||| ||                ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||    
T  2025212 ttttgatttttcgtctttgtgcgg---------------ccgtcttagtgcggtgtttatttgattcagattgaaagattag-ctttgagcaagtgcaga 2025129  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  2025128 tccgatcaatgacaatg 2025112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 2968557 - 2968769
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgattt-cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    ||||||||  || ||| |||||| || ||||||||| ||||||||||  |||||||||| ||| ||||| |||||| |||||||||  || | | | |||    
T  2968557 ttgtttttctttatattctaattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgcacaactttgttt 2968656  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||||||||  |||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||  |  ||||||||||||||     
T  2968657 gttttgattttccgtttttgtgcggtgtgttttttattttccgtcttagtgcggtatttatttgattcaggttgaaagatccg-ctttgagcaagtgcaa 2968755  T
Q  557 attcgatcaatgac 570  Q
    || |||||||||||    
T  2968756 atccgatcaatgac 2968769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 454 - 574
Target Start/End: Complemental strand, 43937184 - 43937065
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  43937184 tttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtg 43937086  T
Q  554 cagattcgatcaatgacaatg 574  Q
    ||||| |||||||||||||||    
T  43937085 cagatccgatcaatgacaatg 43937065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 28297211 - 28296995
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatatttt--ctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||| ||||| | |||||||||  |||||||||| |||| ||  |  ||||||||| | | ||||| |||||||||||||||| || ||  ||  |    
T  28297211 ttgtttttccttcttttctaattgaattagtgatttcatatatatttaccattttctttcgtctgtttttgtgatttcgtcgtctctgaatgacact-gt 28297113  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||| || ||||||| ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  28297112 tgttttgatttttcgtctttgtgcggtgtgtttttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagattag-atttgagcaactgca 28297014  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||| ||||    
T  28297013 gatccgatcaatgaaaatg 28296995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 358 - 570
Target Start/End: Complemental strand, 32779054 - 32778849
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    |||||||| ||| |||| ||||| || ||| |||||| |||||||||| |||||||||| ||||||||| ||||||||||||        || ||| |||    
T  32779054 ttgtttttccttatatcataattaaataagagatttccacatattttcagttttctttcgtttatttttgtgatttcgtcgt--------gactctgttt 32778963  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttattt-ctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||||| ||||||| | ||||||||| |||| | | ||||| |||||||||||||||||||||||||||||||||   ||||||||||||||    
T  32778962 gttttgattttccgtctttgtgcgatgtgtttttgattttcccatcttaatgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtgca 32778864  T
Q  556 gattcgatcaatgac 570  Q
    ||| |||||||||||    
T  32778863 gatccgatcaatgac 32778849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 10334200 - 10334413
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatatttt-ctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    |||||||| |||||||||||||| || |||||| |||| ||||||| |  ||||||||  ||| ||||  |||||||||| ||| |  |||| ||| ||     
T  10334200 ttgtttttccttctatcctaattaaataagtgagttcatatatttttcaattttcttttgtttgttttagtgatttcgtcatctttgcacgactctgttg 10334299  T
Q  457 gttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| || || |||| |||||||||||| || |||||||||||||||||||||||||||||||| |||||| |||||  ||||||||| ||||    
T  10334300 gttttgatttttcgtctgtgtgcggtgtgttttttgatctctcgtcttagtgcggtgtttatttgattcagattgaaatattag-ctttgagcaaatgca 10334398  T
Q  556 gattcgatcaatgac 570  Q
    ||| |||||||||||    
T  10334399 gatccgatcaatgac 10334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 394 - 566
Target Start/End: Complemental strand, 13576254 - 13576090
Alignment:
Q  394 cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttat 493  Q
    ||||||||||| |||||||||| ||||||||  |||||| ||||||||        ||||||||||||||||| ||| |||||||  |||||||||||||    
T  13576254 cacatattttcagttttctttcgtttattttggtgattttgtcgtctcc-------tctatttgttttgatttcccgtctttgtgcagtgtgttttttat 13576162  T
Q  494 ttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    ||  ||||||||||||||||||||| ||||||| |||||||||||   ||||||||||||||||| |||||||    
T  13576161 tttccgtcttagtgcggtgtttattagattcagattgaaagatta-actttgagcaagtgcagatccgatcaa 13576090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 421 - 574
Target Start/End: Original strand, 19720102 - 19720250
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttg 520  Q
    ||||| |||||||||||||||| |||||   | ||||||||||    ||| ||||||  ||||||||||||||||||||||||| ||||||  |||||||    
T  19720102 tttttgtgatttcgtcgtctctgaacgatattgtttgttttga----ccgtctttgtacggtgtgttttttatttctcgtcttaatgcggtaattatttg 19720197  T
Q  521 attcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||  ||||||||||||||| | |||||||| ||||||    
T  19720198 attcaggttgaaagattag-ctttgagcaagtgcaggtccgatcaataacaatg 19720250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 355 - 574
Target Start/End: Complemental strand, 13570832 - 13570627
Alignment:
Q  355 caattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||||  ||||||||||||| || ||||||||||||||||||||| |||| |||| ||| ||||| |||||||| |                ||    
T  13570832 caattgtttttcattctatcctaattaaataagtgatttcacatattttctattttttttcgtttgtttttgtgatttcgaca---------------at 13570748  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgt--cttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagt 552  Q
    |||||||||||| ||| ||||||| ||||| ||||| ||||| |||  ||||||| ||||||||||||||||| |||||||||||||  |||||||||||    
T  13570747 ttgttttgatttcccgtctttgtgcggtgtatttttgatttcccgtgtcttagtgtggtgtttatttgattcaagttgaaagattag-ctttgagcaagt 13570649  T
Q  553 gcagattcgatcaatgacaatg 574  Q
    ||||||  ||||||| ||||||    
T  13570648 gcagatctgatcaattacaatg 13570627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 326 - 466
Target Start/End: Complemental strand, 3204899 - 3204751
Alignment:
Q  326 tgatttaaagtcaattttgacccaaaaatca--------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcat 417  Q
    ||||||| ||||||||||||||||||||| |        ||||||||| | ||||| |||||| ||  |||||||||||||||||||||||||||||| |    
T  3204899 tgatttagagtcaattttgacccaaaaattaccctccgaattgtttttccatctattctaatttaatgagtgatttcacatattttctgttttctttcgt 3204800  T
Q  418 ttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    || ||| | |||||||||||||||| ||||| ||| |||||||||||||    
T  3204799 ttgtttatgtgatttcgtcgtctctgaacgactctgtttgttttgattt 3204751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 565
Target Start/End: Original strand, 24210374 - 24210473
Alignment:
Q  465 tttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatc 564  Q
    |||||| ||||||| ||||||||||| |||||| ||||||||||||| |||||||||||||||||||||||||||  ||||| |||||| |||| |||||    
T  24210374 tttccgtctttgtgcggtgtgtttttaatttctggtcttagtgcggtatttatttgattcaggttgaaagattag-ctttgaacaagtgtagatccgatc 24210472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 538
Target Start/End: Original strand, 4429120 - 4429267
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    ||||||||||||||  | |||||||||||  ||||  |||||||| |||| || |||   | |||||||||||||||||| |||||||   ||| |||||    
T  4429120 tttcacatattttcaatcttctttcattttctttttagatttcgttgtctttacacggcaccatttgttttgattttccgtctttgtgcaatgtattttt 4429219  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||||| ||| || |||||||||||||||  |||||||||||||    
T  4429220 tatttctcgtgttactgtggtgtttatttgatttgggttgaaagatta 4429267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 503
Target Start/End: Complemental strand, 15288903 - 15288752
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctcta-----aacgaat 450  Q
    ||||||||||  ||||||||||||| || | |||||||||| |||||||||||||||||| ||| ||||| |||||||||| |||  |      |||| |    
T  15288903 aattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatttcgtc-tctgaacgactcacgact 15288805  T
Q  451 ctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtctt 503  Q
    || ||||||||||||| | | ||||||| ||||||||||||||||||| ||||    
T  15288804 ctgtttgttttgatttcctgtctttgtgcggtgtgttttttatttctcatctt 15288752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 356 - 503
Target Start/End: Complemental strand, 15469272 - 15469121
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctcta-----aacgaat 450  Q
    ||||||||||  ||||||||||||| || | |||||||||| |||||||||||||||||| ||| ||||| |||||||||| |||  |      |||| |    
T  15469272 aattgtttttctttctatcctaattaaatacgtgatttcacttattttctgttttctttcgtttgtttttgtgatttcgtc-tctgaacgactcacgact 15469174  T
Q  451 ctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtctt 503  Q
    || ||||||||||||| | | ||||||| ||||||||||||||||||| ||||    
T  15469173 ctgtttgttttgatttcctgtctttgtgcggtgtgttttttatttctcatctt 15469121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 445 - 569
Target Start/End: Original strand, 20992920 - 20993043
Alignment:
Q  445 acgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    |||||||| |||| |||||||||||  |||||||| ||| |||||||||||| ||| |||||| | |||||||||||||| |||||||| ||||   |||    
T  20992920 acgaatctgtttgctttgattttccatctttgtgtagtgcgttttttatttcccgttttagtgtgatgtttatttgattctggttgaaaaatta-acttt 20993018  T
Q  545 gagcaagtgcagattcgatcaatga 569  Q
    |||||| ||||||||| || |||||    
T  20993019 gagcaaatgcagattcaattaatga 20993043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 571
Target Start/End: Complemental strand, 38546165 - 38546044
Alignment:
Q  449 atctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagc 548  Q
    |||||||||||||||||| |||  |||| | ||||||||||| |||| | |||||||| || |||||||||||||||| |||||||||||   ||||| |    
T  38546165 atctatttgttttgatttcccgtttttgagcggtgtgtttttgattttttgtcttagtacgatgtttatttgattcagattgaaagatta-actttgacc 38546067  T
Q  549 aagtgcagattcgatcaatgaca 571  Q
    || |||| || ||||||||||||    
T  38546066 aaatgcatatccgatcaatgaca 38546044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 458 - 566
Target Start/End: Complemental strand, 35779081 - 35778974
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||| ||||||| ||||| ||||||||||  | ||||||| |||||||||||| ||| ||||||||| | ||| |||||| |||||||| |    
T  35779081 ttttgattttccgtctttgtgcggtgtattttttattttacatcttagttcggtgtttattttatttaggttgaaaaaatag-ttttgatcaagtgcata 35778983  T
Q  558 ttcgatcaa 566  Q
    ||| |||||    
T  35778982 ttcaatcaa 35778974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 3204759 - 3204673
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||||||||||||||| |||||||||||||||| ||||||||||||   |||||||||||||| || |||| ||| ||||||    
T  3204759 ttttgatttctcgtcttagtgcagtgtttatttgattcaagttgaaagatta-actttgagcaagtgcatatccgataaatcacaatg 3204673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 498 - 569
Target Start/End: Complemental strand, 10633144 - 10633074
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||||| |||||| |||||| ||||||||    
T  10633144 cgtcttagtgcggtgtttattttattcaggttgaaagattag-ctttgatcaagtgtagattcaatcaatga 10633074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 473 - 555
Target Start/End: Original strand, 4928111 - 4928192
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| |||||||||||||||||||||  ||||| ||||||| ||||||||||||||| | |||||  ||||||||||||||    
T  4928111 tttgtgcggtgtgttttttatttctcgttctagtgtggtgtttgtttgattcaggttgagatattag-ctttgagcaagtgca 4928192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 487 - 569
Target Start/End: Complemental strand, 6220070 - 6219989
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||| ||||||| ||||  |||| ||||||||| ||||||||||||||||||| | |||||||||||||||||| ||||||||    
T  6220070 ttttaatttctcatctttatgcgatgtttatttcattcaggttgaaagattag-tcttgagcaagtgcagattcaatcaatga 6219989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 560
Target Start/End: Original strand, 18204093 - 18204198
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||||||||| |  |||||||||| ||||   ||||||| |||||  ||||| ||||||    
T  18204093 tttgttttgatttcccgtctttgtatgttgtgttttttatttctcgtcttaatttggtgtttattggatttgagttgaaatattag-ctttgatcaagtg 18204191  T
Q  554 cagattc 560  Q
    |||||||    
T  18204192 cagattc 18204198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 415
Target Start/End: Complemental strand, 23971197 - 23971140
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttc 415  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||    
T  23971197 ttgtttttccttctattctaattgaataagtgatttcacatattttatgttttctttc 23971140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 570
Target Start/End: Original strand, 19488983 - 19489066
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||  |||| ||||  ||||||||||||||||||||||||||||||   ||||| |||||||| |||| |||||||||    
T  19488983 ttttttattttccgtcatagtctggtgtttatttgattcaggttgaaagatta-actttgatcaagtgcaaattcaatcaatgac 19489066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 566
Target Start/End: Original strand, 33526566 - 33526619
Alignment:
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    |||||||||||||||| |||||||||| |||||  ||||||||||||||||||||    
T  33526566 gtttatttgattcaggatgaaagatta-tttttcggcaagtgcagattcgatcaa 33526619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 14186909 - 14186950
Alignment:
Q  502 ttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  14186909 ttagtgcggtctttatttgattcaggttgaaaaattagtttt 14186950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 42261060 - 42261141
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||| || ||||||| ||   |||||||||||  |||||||||| ||| ||||||||||| ||||||||| |||||    
T  42261060 ttttgatttttcgtctttgtgcggaacgttttttattttccgtcttagtgtggtatttatttgattgaggttgaaatattag 42261141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 482 - 537
Target Start/End: Complemental strand, 26673641 - 26673587
Alignment:
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatt 537  Q
    ||||||||||||||| ||| |||||| ||| |||||||||||||| ||||||||||    
T  26673641 tgtgttttttatttcccgt-ttagtgtggtatttatttgattcagcttgaaagatt 26673587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 977333 - 977422
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctc-gtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||||||| ||| ||||||| ||||||||| ||| || || |||||||||||  |||||||||||||| | ||||| |||| ||||    
T  977333 tttgttttgattt-ccgtctttgtgcggtgtgtttgttaattttccgtcttagtgcgtagtttatttgattcatggtgaaatattaatttt 977422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 505 - 543
Target Start/End: Original strand, 30261900 - 30261938
Alignment:
Q  505 gtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  30261900 gtgcggtgtttatttgattcaaattgaaagattagtttt 30261938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 502 - 532
Target Start/End: Original strand, 32726606 - 32726636
Alignment:
Q  502 ttagtgcggtgtttatttgattcaggttgaa 532  Q
    |||||||||||||||||||||||||||||||    
T  32726606 ttagtgcggtgtttatttgattcaggttgaa 32726636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 323 - 352
Target Start/End: Original strand, 19384326 - 19384355
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaa 352  Q
    ||||||||||||||||||||||||||||||    
T  19384326 gggtgatttaaagtcaattttgacccaaaa 19384355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 574
Target Start/End: Complemental strand, 23971115 - 23971071
Alignment:
Q  529 tgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  23971115 tgaaagattagcttt-gagcaagtgcagatccgatcaatgacaatg 23971071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 2e-75; HSPs: 77)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 358 - 573
Target Start/End: Complemental strand, 4426753 - 4426539
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||  |||  |||    
T  4426753 ttgtttttccttctatcctaattgaataaatgatttcacatattttctgttttctttcatttgtttttttgatttcgtcgtctctaaacgtctctgcttg 4426654  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  4426653 ttttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 4426555  T
Q  558 ttcgatcaatgacaat 573  Q
    | |||| |||||||||    
T  4426554 tccgataaatgacaat 4426539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 9978811 - 9978549
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||         ||||||||| ||| |||| |||||||| || |||||||||||||||||||||||    
T  9978811 gaggggtgatttaaggtcaattttgacccaaaaatcaccccttcaaattgtttttccttttatcttaattgaataaatgatttcacatattttctgtttt 9978712  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  9978711 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgg 9978612  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| | |||||||||||||    
T  9978611 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccaatcaatgacaatg 9978549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 22597114 - 22597376
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||          |||||||| |||||||||||||| || ||||||||||||||||||| ||||||    
T  22597114 gaggggtgatttaaggtcaattttgacccaaaaatcatccctccgagttgtttttccttctatcctaattaaataagtgatttcacatattttttgtttt 22597213  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| |||||||||||| ||||||||| ||||| ||| ||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||    
T  22597214 ctttcgtttgtttttatgattttgtcgtctctgaacgactctgtttgttttgattttctgtctttgtgcggtgtgttttttatttcccgtcttagtgcgg 22597313  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| | |||||||||| ||||    
T  22597314 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaggtccgatcaatgataatg 22597376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 43474270 - 43474008
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||    
T  43474270 gaggggtgatttagggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacaaattttctgtttt 43474171  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| || || ||||||||||||||||| ||| ||||||  ||||||||||| ||||| |||||||||||||    
T  43474170 ctttcgtttgtttttgtgatttcgtcgtctctgaatgactctatttgttttgatttaccgtctttgtacggtgtgtttttgatttcccgtcttagtgcgg 43474071  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  43474070 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatctgatcaatgacaatg 43474008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 320 - 570
Target Start/End: Original strand, 5754267 - 5754525
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||| ||||| || |||||||||||||||| ||||||    
T  5754267 gaggggtgatttagggtcaattttgacccaaaaatcatccctccgaattgtttttccttctatcctagttgaataaatgatttcacatattttttgtttt 5754366  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||||||| ||||| |||||||||||||| | ||||| ||| ||||||||| ||| ||| ||||||| ||||||||||| |||||||||||||||||||    
T  5754367 ctttcatttgtttttgtgatttcgtcgtctatgaacgactctgtttgttttgttttcccgtctttgtgcggtgtgtttttgatttctcgtcttagtgcgg 5754466  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  5754467 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgac 5754525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 35333529 - 35333746
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||| ||||| ||| ||    
T  35333529 aattgtttttcctgctatcctaattgaataagtgatttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtttctgaacgactctgtt 35333628  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| |||||||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  35333629 tgttttgatttcccgtctttgtgcagtgtgttttttattttccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgta 35333727  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  35333728 gatccgatcaatgacaatg 35333746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 20561274 - 20561012
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  20561274 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccaaatcgaataagtggtttcacatattttctgtttt 20561175  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| |||||||  |||||||||||||||| | |||||||||||    
T  20561174 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccatcttagtgcgg 20561075  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  |||||||||| | |||| |||||||||||||||    
T  20561074 tgtttatttgattcaggttgaaagattag-ctttgagcaagagtagatccgatcaatgacaatg 20561012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 38535447 - 38535185
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||| ||         ||| ||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  38535447 gaggggtgatttagggtcaattttgacccaaaaagcacccctttgaattttttttccttctatcataattgaataagtgatttcacatattttctgtttt 38535348  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||| |||| |||| ||| ||||||| ||||||||||||||||| |||| ||||||||    
T  38535347 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttatttttatttcccgtctttgtgcggtgtgttttttatttcccgtcctagtgcgg 38535248  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||| |||||||||    
T  38535247 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaggttcgatccatgacaatg 38535185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 364 - 574
Target Start/End: Complemental strand, 10287095 - 10286887
Alignment:
Q  364 tttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttga 463  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| | ||||| | | ||||||| ||    
T  10287095 tttcttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttt-ga 10286997  T
Q  464 ttttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgat 563  Q
    ||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  10286996 tttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgat 10286898  T
Q  564 caatgacaatg 574  Q
    |||||||||||    
T  10286897 caatgacaatg 10286887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 32314466 - 32314682
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaa-tctat 454  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||| |||||| ||||||||| | |||| ||| |    
T  32314466 aattgttttttcttctatcctaattgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctga-cgaactctgt 32314564  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    ||||||||||||  || ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  32314565 ttgttttgatttctcgtctttgtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgc 32314663  T
Q  555 agattcgatcaatgacaat 573  Q
    ||||  |||||||||||||    
T  32314664 agatctgatcaatgacaat 32314682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 12704666 - 12704928
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  12704666 gaggggtgatttagggtcaattttgacccaaaaatcaccccttcgaattgtttttccttatatcctaattgaataagtgatttcacatattttctgtttt 12704765  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||| ||||||||| ||||| | | ||||||||||||| ||| |||||||  |||||||||||||||| |||||||||||||    
T  12704766 ctttcgtttgtttttgtgattttgtcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcagtgtgttttttatttcccgtcttagtgcgg 12704865  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||| |||||||||||||||  |||||||||||||| ||  ||||||| ||||||    
T  12704866 tgtttatttgatttaggttgaaagattag-ctttgagcaagtgcatatcagatcaatcacaatg 12704928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 25067878 - 25068091
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||  |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||    
T  25067878 ttgtttttccttctattttaattgaataagtgatttcacatattttctgttttctttcgtttctttttgtgatttcgtcgtctctgaacgactctgtttg 25067977  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||| |||  |||||    
T  25067978 ttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgc-gtgtttatttgattcaggttgaaagattag-ctttgaacaa-agcaga 25068074  T
Q  558 ttcgatcaatgacaatg 574  Q
    |||||||||||||||||    
T  25068075 ttcgatcaatgacaatg 25068091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 31908958 - 31908697
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||| ||||||| |||||||||||| ||||||||||         ||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  31908958 gagggatgatttagagtcaattttgatccaaaaatcacccttccgaattgttttttcttttatcctagttgaataagtgatttcacatattttctgtttt 31908859  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||| | ||||| | | ||||||||||||| ||| ||||||| ||||| ||||| |||||  ||||||||||||    
T  31908858 ctttcgtttgtttttctgatttcgtcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtgtatttttgatttcctgtcttagtgcgg 31908759  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||    
T  31908758 tgtttatttgattcaggttgaaag-ttag-ctttgagcaagtgcagatccgatcaatgacaatg 31908697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 44942311 - 44942527
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  ||| ||||| |||||||||||||| | ||| | ||| ||||    
T  44942311 ttgttttttcttctatcctaattgaataagtgatttcacatattttatgttttcttttgtttgtttttgtgatttcgtcgtctttgaactactctgtttg 44942410  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttct-cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    | ||||||| ||| ||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||     
T  44942411 tcttgatttcccgtctttgtgcggtgtgttttttatttttccgtcttagtgcggtgtttatttgattcagcttgaaagattag-ctttgagcaagtgcaa 44942509  T
Q  557 attcgatcaatgacaatg 574  Q
    || |||||||||||||||    
T  44942510 atccgatcaatgacaatg 44942527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 367 - 574
Target Start/End: Original strand, 4732106 - 4732311
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||| |||| ||| ||||| ||||||| |||||||| ||||||||| |||||||||||||    
T  4732106 cttctatcctaattgaataagtgatttcacatactttttgtttt-tttcgtttgtttttgtgatttcatcgtctctgaacgaatctgtttgttttgattt 4732204  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||||| | |||||||||||| |||| |||||||    
T  4732205 cccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaagttgaaagatta-tctttgagcaagtgtagatccgatcaa 4732303  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  4732304 tgacaatg 4732311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 7073090 - 7072828
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatc---------aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||||||||||||         ||||| |||| ||||||||||||||||| |||| | |||||| ||||||||||||    
T  7073090 gaggggtgatttagggtcaattttgacccaaaaatcgccctttcgaattggttttccttctatcctaattgaataagtaacttcacaaattttctgtttt 7072991  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| ||||||| |||||||| ||||| ||| ||||||||||||| ||| ||||||| |||||||||||||||||  ||||||||||||    
T  7072990 ctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcgg 7072891  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||| |||| ||||| ||||||| ||||||| || | |||||||||||||    
T  7072890 tgtttatttgattcaggtcgaaatattag-ttttgaggaagtgcaaatccaatcaatgacaatg 7072828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 18089534 - 18089277
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||| ||||||||||         ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  18089534 gaggggtgatttagggtcaattttgatccaaaaatcactcctccgaattgttttttcttatatcctaattgaataagtgatttcacatattttctgtttt 18089435  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||  |||    || |||||||||||||||| ||| | ||| ||||||||||||| ||| |||| || ||||| ||||||||||| |||||||||||||    
T  18089434 ctttagttt----ttgtgatttcgtcgtctcttaacaactctttttgttttgatttcccgtctttatgcggtgtattttttatttc-cgtcttagtgcgg 18089340  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||| |||||||||||||  ||||||||||||||||| |||||||||||||||    
T  18089339 tgtttatttgattcaagttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 18089277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 28231194 - 28230977
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||| |  ||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||| | |||||||| ||| | ||| ||    
T  28231194 aattgtttttccttctatcttggttgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgattccatcgtctctgaacaactctgtt 28231095  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| |||| ||| ||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||    
T  28231094 tgtttttatttcccgtctttgtgcggtgtgttttttatatcccgtcttagtgcggtgtttatttgattcaggttgaaagatcag-ctttgagcaagtgca 28230996  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  28230995 gatccgatcaatgacaatg 28230977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 356 - 573
Target Start/End: Complemental strand, 13740757 - 13740541
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||| |||||||||| ||||  ||||| | | ||    
T  13740757 aattgtttttccttctatcctaattgaataagtgatttcatatattttctgttttctttcgtttgtttttgtgatttcgtcatctccgaacgactttgtt 13740658  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||||||| ||||||| |||||||||||  ||| ||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||| ||    
T  13740657 tgttttgattttccgtctttgtgcggtgtgtttttgctttttcgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgaacaagtaca 13740559  T
Q  556 gattcgatcaatgacaat 573  Q
    ||| | ||||||||||||    
T  13740558 gatccaatcaatgacaat 13740541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 376 - 573
Target Start/End: Complemental strand, 28261965 - 28261769
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt 475  Q
    |||||||| | ||||||| ||||||||||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||| ||| ||||||||| ||  ||||    
T  28261965 taattgaatatgtgattttacatattttctgttttctttcgtttgtttttgtgatttcttcgtctctgaacgactctgtttcttttgatttcccttcttt 28261866  T
Q  476 gtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaat 573  Q
    ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||    
T  28261865 gtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ttttgagcaagagcagatccgatcaatgacaat 28261769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 4604402 - 4604187
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||||  || ||||| |||||||||||||||| || || ||| ||||    
T  4604402 ttgtttttccttctattctaattgaataagtgatttcacatattttctgctttctttcgattgtttttgtgatttcgtcgtctctgaatgactctgtttg 4604303  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||| |  |||| ||  |||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  4604302 ttttgatttttcatctttatgcagtgtgttttttatttcccgtcttagtgtggtgtttatttgattcaggttgaaagactag-ctttgagcaagtgcaga 4604204  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  4604203 tccgatcaatgacaatg 4604187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 4739355 - 4739570
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||| ||||||||| || |||| ||||||||||||||||||||| || | ||| ||||| |||||||||||||||| || || ||| ||||    
T  4739355 ttgtttttccttccatcctaattaaataagtaatttcacatattttctgtttttttccgtttgtttttgtgatttcgtcgtctctgaatgactctgtttg 4739454  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || ||||||| ||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4739455 ttttgatttctcgtctttgtgcggtgtgttttttactttcggtcttagtgcggtgtttatttgattcaggttgaaagattag-ttttgagcaagtgcaga 4739553  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  4739554 tccgatcaatgacaatg 4739570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 11938001 - 11937739
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttctt-ctatcctaattgaacaagtgatttcacatattttctgttt 409  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||    
T  11938001 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttcctttctatcctaattgaataagtgatttcacatattttttgttt 11937902  T
Q  410 tctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcg 509  Q
    |||||| || |||||| | ||||| |||||||| ||||| ||| |||||||||||||  || ||||||| ||||||||||| ||||| ||||||||||||    
T  11937901 tctttcgttgatttttgtaatttcttcgtctctgaacgactctgtttgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtcttagtgcg 11937802  T
Q  510 gtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
     ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||| ||||||||    
T  11937801 ttgtttatttgatt-aggttgaaagattag-tattgagcaagtgcagatccgatcagtgacaatg 11937739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 36867987 - 36868249
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||| |||||||||         ||||||||| ||||||| |||||| || ||| |||||||||||||||||  |||    
T  36867987 gaggggtgatttagggtcaattttgactcaaaaatcacccctctgaattgtttttccttctattctaattcaataagcgatttcacatattttctacttt 36868086  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| |||||  ||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| | ||||||||| |||||||||||||||||||    
T  36868087 ctttcgtttgtttttgcgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcgatgtgtttttgatttctcgtcttagtgcgg 36868186  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||   |||||||||||||| || || ||||||||||||    
T  36868187 tgtttatttgattcaggttgaaagatta-actttgagcaagtgcaaatccgttcaatgacaatg 36868249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 384 - 573
Target Start/End: Complemental strand, 12891188 - 12890999
Alignment:
Q  384 caagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtg 483  Q
    |||||||||||||||||||||| ||||||||| ||| ||||| |||||||||||||||  ||||| ||| ||||||||||||| ||| ||||||| ||||    
T  12891188 caagtgatttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctcggaacgactctgtttgttttgatttcccgtctttgtgcggtg 12891089  T
Q  484 -tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaat 573  Q
     ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  12891088 ttgtttttgatttctcgtcctagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaat 12890999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 27095731 - 27095947
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||  |||| ||| ||||    
T  27095731 ttgtttttccttctatcctaattgaataagtgatttcacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttg 27095830  T
Q  458 ttttgattttccgcctttgtgtggtgtg-ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||| ||  ||||||| | |||| ||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||  ||||||||||| | |    
T  27095831 ttttgatttcccctctttgtgcgatgtgtttttttatttcccgtcgtagtgcgatgtttatttgattcaagttgaaagattag-ctttgagcaagtactg 27095929  T
Q  557 attcgatcaatgacaatg 574  Q
    || |||||||||||||||    
T  27095930 atccgatcaatgacaatg 27095947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 34963161 - 34962956
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||          | |||||||||||||||| ||||| ||| ||||    
T  34963161 ttgtttttccttctaccctaattgaataagtgatttcacattttttctgttttcttt----------tgtgatttcgtcgtctctgaacgactctgtttg 34963072  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  34963071 ttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-atttgagcaagtgcaga 34962973  T
Q  558 ttcgatcaatgacaatg 574  Q
    | | |||||||||||||    
T  34962972 tcctatcaatgacaatg 34962956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 367 - 574
Target Start/End: Complemental strand, 13879092 - 13878889
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||| ||||| ||| |||||||||||||    
T  13879092 cttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt-gtcgtctctgaacgactctgtttgttttgattt 13878994  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||||||  ||| ||||| ||| |||||  ||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||    
T  13878993 cccgtctttgtgcggtgtg--tttgatttcccgttttagtagggtgtttatttgattcaggttgaaagatta-actttgagcaagtgcagatccgatcaa 13878897  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  13878896 tgacaatg 13878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 367 - 574
Target Start/End: Complemental strand, 14019217 - 14019014
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||||||| ||||| ||| |||||||||||||    
T  14019217 cttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttatttttgtgattt-gtcgtctctgaacgactctgtttgttttgattt 14019119  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||||||  ||| ||||| ||| |||||  ||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||    
T  14019118 cccgtctttgtgcggtgtg--tttgatttcccgttttagtagggtgtttatttgattcaggttgaaagatta-actttgagcaagtgcagatccgatcaa 14019022  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  14019021 tgacaatg 14019014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 34416858 - 34416643
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||| |||  ||| ||||| |||||||||||||| | ||||| | | ||    
T  34416858 aattgtttttccttatatcctaattgaataagtgatttcacatattttcagtttttttttgtttgtttttgtgatttcgtcgtct-tgaacgactttgtt 34416760  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| |||||| |||||||| ||||||||| ||  ||| ||||||||||||||||||||||||||  ||||||||||||||    
T  34416759 tgttttgatttcccgtctttgtgcggtgtg-tttttattcctcgtcttaatgttgtgcttatttgattcaggttgaaagattag-ctttgagcaagtgca 34416662  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  34416661 gatccgatcaatgacaatg 34416643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 17268266 - 17268006
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  17268266 gaggggtgatttatggtcaattttgacccaaaaatcatcccttcgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 17268167  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
     |||  ||   |||| |||||||||||||||| ||||| | | ||||||||||||| ||| ||||||| | ||||||||| ||||| ||| || ||| ||    
T  17268166 ttttgtttg--ttttgtgatttcgtcgtctctgaacgactttgtttgttttgatttcccgtctttgtgcgttgtgtttttgatttcccgtttttgtgtgg 17268069  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    || |||||||||||||||| ||| |||||  ||||||||||||||||| |||||||||||||||    
T  17268068 tgattatttgattcaggttaaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 17268006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 320 - 570
Target Start/End: Original strand, 15919853 - 15920111
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||||||||||| |||||||||||||||||||||||          |||||||| ||||||||||||||||| || |||||||||||||||||  |||     
T  15919853 gaggggtgatttagagtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataaatgatttcacatattttcaattt- 15919951  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtg--tgttttttatttctcgtcttagtgc 508  Q
    ||||| ||| ||||| |||||||||| |||||  |||| ||| ||||||||||||| ||| ||||||| ||||  | ||||||||||| ||||||| |||    
T  15919952 ctttcgtttgtttttgtgatttcgtcatctctgcacgactctgtttgttttgatttcccgtctttgtgcggtgtattttttttatttcccgtcttaatgc 15920051  T
Q  509 ggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
     |||||||||||||||||||||||| |||||  |||| |||||||||||| |||||||||||    
T  15920052 -gtgtttatttgattcaggttgaaatattag-ctttgtgcaagtgcagatccgatcaatgac 15920111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 368 - 570
Target Start/End: Original strand, 34471002 - 34471203
Alignment:
Q  368 ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgatttt 467  Q
    ||||||| ||||||||  |||||||||||||||||||| ||||||||| ||| ||||| | || || |||||| | ||||| ||| |||||||||||||     
T  34471002 ttctatcttaattgaatcagtgatttcacatattttctattttctttcgtttgtttttgtaatgtcttcgtctttgaacgactctgtttgttttgatttc 34471101  T
Q  468 ccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    ||| ||||||| ||||||||||| ||||| ||| |||||||||| ||||||||||||| ||||||||||||   ||||||||||||||||| | ||||||    
T  34471102 ccgtctttgtgcggtgtgtttttaatttcccgttttagtgcggtatttatttgattcatgttgaaagatta-actttgagcaagtgcagatccaatcaat 34471200  T
Q  568 gac 570  Q
    |||    
T  34471201 gac 34471203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 574
Target Start/End: Original strand, 41797649 - 41797832
Alignment:
Q  387 gtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgt 486  Q
    ||||||||||||||| | ||||||||||| ||| ||||| ||||||||||||||   ||||| ||| ||||||||||||| ||| ||||||| |||||||    
T  41797649 gtgatttcacatattatatgttttctttcgtttgtttttgtgatttcgtcgtcttagaacgactctgtttgttttgatttcccgtctttgtgcggtgtgt 41797748  T
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||||||| ||||||||||||||||||||   ||||||||  ||||||||||||||||| || ||||||||||||    
T  41797749 ttttgatttcccgtcttagtgtggtgtttatttgattcaggt---aagattag-ctttgagcaagtgcagatccgttcaatgacaatg 41797832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 421 - 574
Target Start/End: Original strand, 29542881 - 29543034
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtg-tttattt 519  Q
    ||||| |||||||||||||||| ||||| ||| ||||||||||||| |||  |||||| ||||||||||| ||||| ||||||||||||||| |||||||    
T  29542881 tttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcggtgttttattt 29542980  T
Q  520 gattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||| |||||  |||||||||||||| || |||||||||||||||    
T  29542981 gattcaggttgaaaaattag-ctttgagcaagtgcaaatccgatcaatgacaatg 29543034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 455 - 573
Target Start/End: Complemental strand, 38384455 - 38384338
Alignment:
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| ||| ||||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||  |||||||||||||    
T  38384455 ttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcggtgtttattttattcaggttgaaagattag-ctttgagcaagtgc 38384357  T
Q  555 agattcgatcaatgacaat 573  Q
    |||| ||||||||||||||    
T  38384356 agatccgatcaatgacaat 38384338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 9690115 - 9689865
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||| ||||||||||||||||         | ||||||| ||||||||||||||||| ||||||| ||||||||||| ||||||    
T  9690115 gaggggtgatttaaggtcaaatttgacccaaaaatcacccctccgaactgtttttccttctatcctaattgaataagtgatctcacatattttttgtttt 9690016  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
     |||| ||| ||||| ||||||| || ||      ||      ||| ||||||||| ||| | |||||  |||||||||||||||| ||||| |||||||    
T  9690015 ttttcgtttgtttttgtgatttcctcctc------cg------tttattttgatttcccgtcattgtgcagtgtgttttttatttcccgtctcagtgcgg 9689928  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||   |||||||||||||| || |||||||||||||||    
T  9689927 tgtttatttgattcaggttgaaagatta-actttgagcaagtgcatatccgatcaatgacaatg 9689865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 427 - 574
Target Start/End: Original strand, 43695963 - 43696109
Alignment:
Q  427 tgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcag 526  Q
    |||||||||  ||||| |||||  || ||||||||||||||||   |||||| ||||||||||| |||||  ||||||||||||||||||||||||||||    
T  43695963 tgatttcgttttctctgaacgatcctgtttgttttgattttccatttttgtgcggtgtgtttttaatttcctgtcttagtgcggtgtttatttgattcag 43696062  T
Q  527 gttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||| |||||  ||||| |||||||||||  ||||||||||||||    
T  43696063 gttgaaaaattag-ctttgaacaagtgcagatctgatcaatgacaatg 43696109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 323 - 484
Target Start/End: Original strand, 33012059 - 33012229
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||  ||||||||||||||||||||||         ||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||| ||    
T  33012059 gggtgatttagggtcaattttgacccaaaaatcactcatccgaattgtttttccttctattctaattgaataagtgatttcacatattttcagttttgtt 33012158  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    || ||| ||||| |||||||||||||||| ||| | ||| ||||||||||||| ||| ||| ||| |||||    
T  33012159 tcgtttgtttttgtgatttcgtcgtctctgaacaactctgtttgttttgatttcccgtcttagtgcggtgt 33012229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 385 - 513
Target Start/End: Original strand, 32015277 - 32015404
Alignment:
Q  385 aagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||  ||| | ||| ||||||||||||| ||| |||||||||||||    
T  32015277 aagtgatttcacatattttctgttttcattcatttgtttttgtgatttcgtcgtctc-gaacaactctgtttgttttgatttcccgtctttgtgtggtgt 32015375  T
Q  485 gttttttatttctcgtcttagtgcggtgt 513  Q
    |||||| ||||| | |||| | |||||||    
T  32015376 gtttttgatttcccatctttgcgcggtgt 32015404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 358 - 570
Target Start/End: Complemental strand, 17767647 - 17767444
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctattt 456  Q
    |||||||| ||| |||||||||| || |||||||||| |||||||||| ||||||||||||||  |||| ||||||||||||  ||         | |||    
T  17767647 ttgtttttccttatatcctaattaaataagtgatttccacatattttcagttttctttcatttgattttgtgatttcgtcgtgact---------tgttt 17767557  T
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||||  || ||||||| |||||| |||| ||||| | ||||||| ||||| |||||||||| ||||| ||||||||   |||||||||||||||    
T  17767556 gttttgatttctcgtctttgtgcggtgtgcttttgatttcccatcttagtacggtgcttatttgatttaggttaaaagatta-actttgagcaagtgcag 17767458  T
Q  557 attcgatcaatgac 570  Q
    || |||||||||||    
T  17767457 atccgatcaatgac 17767444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 458 - 574
Target Start/End: Original strand, 32015378 - 32015494
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||| ||  ||||| | |||||||||||| ||||  ||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||    
T  32015378 ttttgatttcccatctttgcgcggtgtgtttttttattttccgtcttagtacgatgtttatttgattcaggttgaaagattag-ttttgagcaagtgcag 32015476  T
Q  557 attcgatcaatgacaatg 574  Q
    || ||||||||| |||||    
T  32015477 atccgatcaatgtcaatg 32015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 391 - 570
Target Start/End: Original strand, 17792533 - 17792711
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    |||||||||||||| |||||||||| ||| ||||| |||||||||| |||   | ||| | | ||| ||||||||| ||| ||||||  |||||||||||    
T  17792533 tttcacatattttcagttttctttcgtttgtttttgtgatttcgtcatctagca-cgactttgtttattttgatttcccgtctttgttcggtgtgttttt 17792631  T
Q  491 ta-tttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    || ||||  |||||| | | |||||||||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||    
T  17792632 taatttcatgtcttaatacagtgtttatttgattcatgttgaaagattag-ttttgatcaaatgcagattcaatcaatgac 17792711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 412 - 567
Target Start/End: Complemental strand, 823999 - 823845
Alignment:
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| |||||| ||||||| |  ||||  ||||| ||||||||||   | ||||||| ||||| ||||||||||  ||||||||||||||    
T  823999 tttcgtttctttttgtgattttgtcgtctttgcacgaccctattagttttgatttcttgtctttgtgcggtgtattttttattttccgtcttagtgcggt 823900  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    ||||||||||||||| |||||| |||||  ||||||||||| ||||||| ||||||    
T  823899 gtttatttgattcagattgaaaaattag-ctttgagcaagttcagattcaatcaat 823845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 11798523 - 11798407
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagt 552  Q
    |||||||||||||  |  |||||||  ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||| ||    
T  11798523 tttgttttgatttctcatctttgtgcagtgtgttttttgatttcccgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgagcaggt 11798425  T
Q  553 gcagattcgatcaatgac 570  Q
    | |||| |||||||||||    
T  11798424 gtagatccgatcaatgac 11798407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 481 - 570
Target Start/End: Original strand, 27666359 - 27666447
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||  ||||||  ||||||| |||| |||||||||    
T  27666359 gtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttaaaagatta-attttgatgaagtgcatattcaatcaatgac 27666447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 474 - 569
Target Start/End: Complemental strand, 11581109 - 11581015
Alignment:
Q  474 ttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||| ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||  ||| | |||||||| |||| ||||||||    
T  11581109 ttgtgcggtgtcttttttatttctcgtattagtgcggtatttatttgattcaggttgaaagattag-gtttcatcaagtgcaaattcaatcaatga 11581015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 452 - 570
Target Start/End: Complemental strand, 13548901 - 13548785
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    ||||| |||||||||  || ||||||| |||||||||||||||  | |||||| |||||| |||||||||||||||||||||||||||  ||||| |||     
T  13548901 tatttattttgatttctcgtctttgtgcggtgtgttttttattcat-gtcttaatgcggtttttatttgattcaggttgaaagattag-ctttgatcaaa 13548804  T
Q  552 tgcagattcgatcaatgac 570  Q
    ||||||||| |||||||||    
T  13548803 tgcagattcaatcaatgac 13548785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 445 - 570
Target Start/End: Original strand, 6510595 - 6510719
Alignment:
Q  445 acgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    |||| ||| |||||||||||||||||  |||||| || |||||||||||||  |||||||||||  ||||||||||||||| ||||||| |||||  |||    
T  6510595 acgattctgtttgttttgattttccgtttttgtgcggcgtgttttttattttccgtcttagtgcaatgtttatttgattcaagttgaaaaattag-cttt 6510693  T
Q  545 gagcaagtgcagattcgatcaatgac 570  Q
    ||  ||||||| |||| |||||||||    
T  6510694 gaataagtgcatattcaatcaatgac 6510719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 566
Target Start/End: Complemental strand, 7582119 - 7581975
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttg 520  Q
    ||||| |||||||||| ||| || | || ||| |||||||||||||  || |||||||   ||||||||| ||||||| ||||| |||  ||||||||||    
T  7582119 tttttgtgatttcgtcatctttacatgactctgtttgttttgatttctcgtctttgtgcactgtgtttttgatttctcatcttaatgccatgtttatttg 7582020  T
Q  521 attcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    ||||||||||||| |||| | |||||||||||||| |||| |||||    
T  7582019 attcaggttgaaatatta-tctttgagcaagtgcaaattcaatcaa 7581975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 20124737 - 20124653
Alignment:
Q  485 gttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||  | |||||||| ||||||||||| |||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  20124737 gttttttattttccatcttagtgtggtgtttatttcattcaggttgaaagattag-ctttgagcaagtgcaaattcgatcaatgac 20124653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 458 - 570
Target Start/End: Complemental strand, 40039304 - 40039192
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    ||||||||||||| ||||||    |||||||||| ||||  |||||||||||||||||||||| ||||||||||||| ||||| | |||| |||||||||    
T  40039304 ttttgattttccgtctttgtacaatgtgtttttttattttccgtcttagtgcggtgtttattttattcaggttgaaaaattag-tattgatcaagtgcag 40039206  T
Q  557 attcgatcaatgac 570  Q
    |||| |||||||||    
T  40039205 attcaatcaatgac 40039192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 375 - 558
Target Start/End: Complemental strand, 45694532 - 45694342
Alignment:
Q  375 ctaattgaacaagtgatttc-acatattttctgttttctttcatttattttta-tgatttcgtcgtctctaaacgaatctatttgttttgattttccgcc 472  Q
    ||||||||| |||||||||| | ||||| |  || |||||| ||||||||||  ||||||| |||| | |  |||| ||| ||||||||||||||||| |    
T  45694532 ctaattgaataagtgatttccatatattgttagtcttcttttatttattttttgtgatttcatcgtatttgcacgactctgtttgttttgattttccgtc 45694433  T
Q  473 tttgtgtggtgtgtttttt------atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    |||||| | ||||||||||      ||||||| ||||||| |||||||||||||| ||| |||||||||||| | ||||||||| |||||||    
T  45694432 tttgtgcgatgtgttttttttttttatttctcatcttagtacggtgtttatttgactcatgttgaaagatta-tctttgagcaaatgcagat 45694342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 543
Target Start/End: Complemental strand, 15261394 - 15261323
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||||||| ||||||||||   ||||| |||||||||||||||||||||||||||||| ||||||||    
T  15261394 ctttgtgtggtgtattttttattttcggtcttcgtgcggtgtttatttgattcaggttgaaaggttagtttt 15261323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 33012203 - 33012289
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||||||||||||||||||| |||||||||||||||||||  ||||| |||||||| || ||||||| |||||||    
T  33012203 ttttgatttcccgtcttagtgcggtgtttatttaattcaggttgaaagattag-ctttgatcaagtgcaaatccgatcaacgacaatg 33012289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 6431383 - 6431286
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||| ||||||||||| |||||   ||||||||||||||| |||||||||||||||||||||||   |||||||||| ||||||  ||||||||||    
T  6431383 ctttgtgcggtgtgtttttgatttccgatcttagtgcggtgttgatttgattcaggttgaaagatta-actttgagcaagcgcagatctgatcaatgac 6431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 555
Target Start/End: Complemental strand, 26254939 - 26254835
Alignment:
Q  449 atctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagc 548  Q
    ||||||||||||||||||| || ||| ||| | ||||||||| |||  | ||||||||||||||||||||||||| ||||||||||||||   |||||||    
T  26254939 atctatttgttttgatttttcgtcttagtgcgatgtgtttttaattatt-gtcttagtgcggtgtttatttgatttaggttgaaagatta-actttgagc 26254842  T
Q  549 aagtgca 555  Q
    |||||||    
T  26254841 aagtgca 26254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 394 - 569
Target Start/End: Complemental strand, 12994270 - 12994098
Alignment:
Q  394 cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttttt-a 492  Q
    ||||||||||  |||||||||||||| || || |||||||| ||||| |  | ||  ||||||  |||||||||| | ||||||||| |||||||  | |    
T  12994270 cacatatttttagttttctttcatttgttcttgtgatttcgccgtctttgcatga--ctatttagtttgattttctgtctttgtgtgatgtgtttaatga 12994173  T
Q  493 tttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||||||||||||||  ||||||||||||||  |||||||||||||  |||||| ||||||| |||| ||||||||    
T  12994172 tttctcgtcttagtgcaatgtttatttgattctagttgaaagattag-ctttgag-aagtgcaaattccatcaatga 12994098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 20607309 - 20607224
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||| ||  ||||||| | |||||| || ||||  | ||||||| ||||||||||||||||||||||||||||||||||||    
T  20607309 ttttgatttcccatctttgtgcgatgtgttcttaattttccttcttagttcggtgtttatttgattcaggttgaaagattagtttt 20607224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 480 - 543
Target Start/End: Original strand, 36080671 - 36080734
Alignment:
Q  480 ggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||  |||||||| |||||||    
T  36080671 ggtgtattttttatttctcgtcttaatacggtgtttatttgattcaaattgaaagagtagtttt 36080734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 454 - 543
Target Start/End: Original strand, 2550292 - 2550381
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||||||||||  ||||||  | | ||||||| ||||  ||||||||||||||||| |||||||| ||||| |||| ||||||||    
T  2550292 tttgttttgattttccatctttgtacgttctgtttttgattttccgtcttagtgcggtgttcatttgatttaggttaaaagtttagtttt 2550381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 558
Target Start/End: Original strand, 11426732 - 11426868
Alignment:
Q  421 tttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttg 520  Q
    ||||| ||||||| ||||||  |  ||||| | |||||| | |||||| | ||||||| ||||||||||||||||  |||  ||||||| | |||||||     
T  11426732 tttttgtgatttcttcgtcttcacgcgaatttgtttgttctaattttcggtctttgtgcggtgtgttttttattttccgttctagtgcgatatttatttc 11426831  T
Q  521 attcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    ||||| |||||||||||||  ||||||||| |||||||    
T  11426832 attcaagttgaaagattag-ctttgagcaattgcagat 11426868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 5171918 - 5172032
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| ||||||| ||||||||||| ||||   || ||| || ||||||||||| |||||||||| ||||||||  ||||| ||| ||    
T  5171918 tttgttttgatttcccgtctttgtgcggtgtgtttttgattttatgttttattgtggtgtttattttattcaggttg-aagattag-ctttgatcaaatg 5172015  T
Q  554 cagattcgatcaatgac 570  Q
    |||||||  ||||||||    
T  5172016 cagattcattcaatgac 5172032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 532
Target Start/End: Complemental strand, 15028372 - 15028230
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtg--ttt 488  Q
    |||||||||||||| || ||||||| ||| |||||  |||||| ||||||     ||| ||||||| ||||| |||  || ||||||| ||||||  |||    
T  15028372 tttcacatattttcagtcttctttcgtttgttttttcgatttcatcgtctagcg-cgactctatttattttggtttatcgtctttgtgcggtgtgctttt 15028274  T
Q  489 tttatttctcgtcttagtgcggtgtttatttgattcaggttgaa 532  Q
    |||||||  |||||||||||| ||||||||||||| ||||||||    
T  15028273 tttattttccgtcttagtgcgatgtttatttgatttaggttgaa 15028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 503 - 543
Target Start/End: Complemental strand, 20598617 - 20598577
Alignment:
Q  503 tagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  20598617 tagttcggtgtttatttgattcaggttgaaagattagtttt 20598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 44150036 - 44149956
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||||  || ||||||| ||||||||||| |||||  ||||||||||| | |||||||||||||||| |||| ||||    
T  44150036 ttttgatttcacgtctttgtgaggtgtgtttttgatttcctgtcttagtgcgatatttatttgattcaggtggaaatatta 44149956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 11561666 - 11561592
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaa 532  Q
    ||||||||| |||  |||||| |||||| |||| ||||   |||||||||||||| |||||||||||||||||||    
T  11561666 ttttgatttaccgtatttgtgcggtgtggttttgattttatgtcttagtgcggtgattatttgattcaggttgaa 11561592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 19382477 - 19382399
Alignment:
Q  417 tttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttattt 495  Q
    |||||||||  |||||||| ||||||  | || | | ||||||||||||||||| ||||||| ||||||||||||||||    
T  19382477 tttatttttgcgatttcgttgtctctgcatgactttgtttgttttgattttccgtctttgtgcggtgtgttttttattt 19382399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 544
Target Start/End: Complemental strand, 23256617 - 23256532
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    |||||||||  || |||||||||||| |||||||| ||||||||||||||   || |||||||||||| ||| ||||||| ||||||    
T  23256617 ttttgatttcacgtctttgtgtggtgcgttttttaattctcgtcttagtg-tatggttatttgattcatgttaaaagattcgttttt 23256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 358 - 438
Target Start/End: Complemental strand, 6431483 - 6431402
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgt 438  Q
    |||||||| ||| ||| |||||| || |||||||||| |||||||||| |||||||||  ||| ||||| ||||||||||||    
T  6431483 ttgtttttccttatattctaattaaataagtgatttccacatattttcagttttcttttgtttgtttttgtgatttcgtcgt 6431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 38450363 - 38450428
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgatt 523  Q
    |||||||||  || ||||||| ||||||||||| ||||||| ||| | ||||||||||||||||||    
T  38450363 ttttgatttatcgtctttgtgcggtgtgtttttaatttctcatctgaatgcggtgtttatttgatt 38450428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 499 - 539
Target Start/End: Original strand, 8781719 - 8781759
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  8781719 gtcttagtgcggtgtttatttgattcaagttaaaagattag 8781759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 17116464 - 17116330
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtg--tgttt 488  Q
    |||||||||||||| || ||||||| ||| ||| | |||||||||||||| |  || |  ||| ||||||| |||||| | ||||||  ||||  | |||    
T  17116464 tttcacatattttcagtcttctttcgtttgtttatgtgatttcgtcgtctttgcacaaccctacttgttttaattttctgtctttgtacggtgtattttt 17116365  T
Q  489 tttatttctcgtcttagtgcggtgtttatttgatt 523  Q
    |||||||  |||||||||||  |||||||||||||    
T  17116364 tttattttccgtcttagtgcaatgtttatttgatt 17116330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 472 - 535
Target Start/End: Complemental strand, 32520336 - 32520273
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaaga 535  Q
    ||||||| || ||||||||||||||| |||||| ||   ||||||||||||||| |||||||||    
T  32520336 ctttgtgcggcgtgttttttatttctagtcttattgtcatgtttatttgattcatgttgaaaga 32520273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 538
Target Start/End: Original strand, 19904649 - 19904714
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||| || |||||||| ||||   || |||||||| |||||||||||||||||| |||||||||    
T  19904649 tttgtgcggcgtgtttttcattttctgttttagtgcgatgtttatttgattcaggtagaaagatta 19904714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 538
Target Start/End: Original strand, 38233719 - 38233776
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||||||||| ||| ||||| |||  |||||||||||||| || |||||||||||    
T  38233719 gtgtgttttttatatcttgtctttgtgtagtgtttatttgatttagattgaaagatta 38233776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 12891231 - 12891195
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca 356  Q
    |||||||||||||  ||||||||||||||||||||||    
T  12891231 gaggggtgatttagggtcaattttgacccaaaaatca 12891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 140; Significance: 5e-73; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 17331307 - 17331569
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| |||||||| |||||||| ||||||||||||||||||||||||||    
T  17331307 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgatttgtttttccttctatcttaattgaataagtgatttcacatattttctgtttt 17331406  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||||||    
T  17331407 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgg 17331506  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||||| ||| |||||||||||    
T  17331507 tgtttatttgattcaggttgaaagattag-ttttgaacaagagcagatccgaccaatgacaatg 17331569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 6281023 - 6281285
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||| ||||| ||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  6281023 gaggggtgatttatggtcaattttgacccaaaaatcacccctctgaattatttttccttctattctaattgaataagtgattttacatattttctatttt 6281122  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| ||||||||||||||||| |||| ||| ||||||||||||| |||  |||||| ||||||||||| ||||| ||||||||||||     
T  6281123 ctttcgtttgtttttgtgatttcgtcgtctctagacgactctgtttgttttgatttaccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcga 6281222  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  6281223 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 6281285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 362 - 574
Target Start/End: Original strand, 3740387 - 3740598
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||| | |||||||||||||||||||||| ||| ||||||||    
T  3740387 ttttccttctatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttgtgtgatttcgtcgtctctaaacgactctgtttgtttt 3740486  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    ||||| ||| ||||||| |||||||||||  |||| ||||| |||||||||||||||| |||||||||||||||||||  ||||||||| ||||||| ||    
T  3740487 gatttcccgtctttgtgcggtgtgtttttgttttcccgtctgagtgcggtgtttatttaattcaggttgaaagattag-ctttgagcaactgcagatccg 3740585  T
Q  562 atcaatgacaatg 574  Q
    |||||||||||||    
T  3740586 atcaatgacaatg 3740598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 33164610 - 33164348
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  |||||||||||| |||||||||         ||||||||| |||||| | |||||||| ||||||||||||||||||||||||||    
T  33164610 gaggggtgatttatggtcaattttgactcaaaaatcactcctccgaattgtttttccttctaccttaattgaataagtgatttcacatattttctgtttt 33164511  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| |||||||  | |||||||| ||||| |||||||||||||    
T  33164510 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgcagcgtgtttttgatttcccgtcttagtgcgg 33164411  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  ||||| |||| |||||| |||||||||||||||    
T  33164410 tgtttatttgattcaggttgaaagattag-ctttgaacaagagcagatccgatcaatgacaatg 33164348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 34431084 - 34431299
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||| |||  |||| |||||||||||||| | ||||| ||| ||    
T  34431084 aattgttttttcttctattttaattgaataagtgatttcacatattttctgttttctttcgtttgattttgtgatttcgtcgtctttgaacgactctgtt 34431183  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||  ||||||   ||||||||||||||    
T  34431184 tgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtcttagtgcggtgtttatttgattcaggttg--agatta-actttgagcaagtgca 34431280  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  34431281 gatccgatcaatgacaatg 34431299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 361 - 574
Target Start/End: Complemental strand, 17096331 - 17096121
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||| |||||| ||||||||| ||||| ||| |||||||    
T  17096331 tttttccttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttt 17096232  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||||||| ||||||| ||||||  ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||| |    
T  17096231 tgattttccgtctttgtgcggtgtg--tttgatttcccgtcttagtacggtgtttatttgattcaggttgaaagattag-ctttgagcaaatgcagatcc 17096135  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  17096134 gatcaatgacaatg 17096121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 39179925 - 39179708
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  39179925 aattatttttccttctattctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 39179826  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||  ||||||| || |||||||||||||| | || ||||||||||||||||||||||||||||||||| |||  |||||||||||| |    
T  39179825 tgttttgatttcccatctttgtgcggagtgttttttatttcccatcctagtgcggtgtttatttgattcaggttgaaagactag-ctttgagcaagtgta 39179727  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  39179726 gatccgatcaatgacaatg 39179708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 18653808 - 18654023
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||||||| ||||||||||||| ||||||||||  |||||||||| |||||||| ||| ||||| ||||||||||||||||  |||| ||| ||||    
T  18653808 ttgttttttcttatatcctaattgaataagtgatttcgtatattttctgatttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttg 18653907  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  18653908 ttttgatttcccgtctttgtgcggtgtgtttttgatttcccatcatagtgcggtgtttatttgattcaggttgaaaaattag-gtttgagcaagtgcaga 18654006  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  18654007 tccgatcaatgacaatg 18654023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 42396609 - 42396393
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||| |||||||||||||| |||||||| ||| ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| ||||||||| ||    
T  42396609 aattattttttcttctatcttaattgaataagcgatttcacatattttttgttttctttcatttgtttttgtgatttcgtcgtctctgaacgaatctgtt 42396510  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||| || ||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||| | | ||| |||||  ||||||||||||||    
T  42396509 tgttttgatttttcgtctttgtgtgatgtgtttttgatttcccgtcttagtgcgatgtttatttgattcatgctcaaatattag-ctttgagcaagtgca 42396411  T
Q  556 gattcgatcaatgacaatg 574  Q
     |||| |||||||||||||    
T  42396410 tattc-atcaatgacaatg 42396393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 356 - 573
Target Start/End: Original strand, 17699577 - 17699793
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||| || || | ||||    
T  17699577 aattgtttttccttctatcctaattgaataagtgatttcacatcttttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaatgactatatt 17699676  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| | | ||||| | ||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||  ||||||||||| ||    
T  17699677 tgttttgatttcctgtctttgcgcggtgtgttttttatttcccgtcttagtgcatcgtttatttgattcaggttgaaagattag-ctttgagcaagtaca 17699775  T
Q  556 gattcgatcaatgacaat 573  Q
    |||  |||||||||||||    
T  17699776 gatctgatcaatgacaat 17699793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 29097815 - 29098030
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||| | ||||| ||| ||||    
T  29097815 ttgtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttagtttgtttttgtgatttcgtcgtctttgaacgactctgtttg 29097914  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||  ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||  ||||| |||| |||||    
T  29097915 ttttgatttcccatctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaaaattag-ctttgaacaagagcaga 29098013  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  29098014 tccgatcaatgacaatg 29098030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 361 - 573
Target Start/End: Complemental strand, 32347806 - 32347595
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||| |||||||||||| ||| ||||| ||| || ||||    
T  32347806 tttttccttctatcctaattgaataagtgatttcacatattttctgttttatttcgtttgtttttgtgatttcgtcgtttctgaacgactctgttggttt 32347707  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| ||||||| ||||||||||| ||||| ||||||||| |||||||||||| ||||| |||||||||||||  ||||||||||||||||| |    
T  32347706 tgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtacggtgtttatttaattcaagttgaaagattag-ctttgagcaagtgcagatcc 32347608  T
Q  561 gatcaatgacaat 573  Q
    |||| ||||||||    
T  32347607 gatcgatgacaat 32347595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 42609168 - 42609385
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||| ||||| |||||| ||||||||| ||| | | |  |    
T  42609168 aattgttttttcttctatcctaattgaataagtgatttcacatattttctattttcttttgtttgtttttgtgattttgtcgtctctgaacaactttgat 42609267  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| ||||||||||| ||||| |||||||||  | ||||||||||||||| |||||||||||||  ||||||||||||||    
T  42609268 tgttttgatttcccgtctttgtgcggtgtgtttttgatttcacgtcttagtatgatgtttatttgattcatgttgaaagattag-ctttgagcaagtgca 42609366  T
Q  556 gattcgatcaatgacaatg 574  Q
     ||||||||||||||||||    
T  42609367 tattcgatcaatgacaatg 42609385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 6635276 - 6635489
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||||||| ||||| ||| ||||    
T  6635276 ttgtttttccttctatcataattgaataagtgatttcacatattttctgttttctttagtttgtttttgtgatttcgtcgtctctgaacgactctgtttg 6635375  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||||  ||||||  ||||||  ||| ||||  |||||||||||||||||||||||||||| |||||||||||||  ||||||||| ||||||    
T  6635376 ttttgattttccttctttgtaaggtgtg--tttgattttccgtcttagtgcggtgtttatttgattcaagttgaaagattag-ctttgagcaaatgcaga 6635472  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  6635473 tccgatcaatgacaatg 6635489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 320 - 571
Target Start/End: Original strand, 28040608 - 28040867
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         || |||||| ||| ||||||||||||| ||||||||||||||||||||||||||    
T  28040608 gaggggtgatttacggtcaattttgacccaaaaatcacccctccaaatcgtttttccttatatcctaattgaataagtgatttcacatattttctgtttt 28040707  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| ||| |||||||| |||||||| |||||||   ||||||||| |||||   |||||||| ||    
T  28040708 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttaattttccgtctttgtgcattgtgtttttgatttcctatcttagtgtgg 28040807  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||||||||||||||| ||| |||||  | |||||||||||| || ||||||||||||    
T  28040808 tgtttatttgattcaggtttaaatattag-ctctgagcaagtgcaaatccgatcaatgaca 28040867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 20483165 - 20483427
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca--------attgttttttcttctatcctaatt-gaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||   |||||||||||||||||||||        ||||||||| ||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  20483165 gaggggtgatttaggatcaattttgacccaaaaatcaccctccaaattgtttttccttttattctaatttgaataagtgatttcacatattttctgtttt 20483264  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
     |||  ||| ||||| |||||||||||||| | ||| | ||| |||||||||||||  || ||||||||||||||||||| ||||| ||||||||| |||    
T  20483265 gttttgtttgtttttgtgatttcgtcgtctttgaacaactctgtttgttttgatttatcgtctttgtgtggtgtgtttttgatttcccgtcttagtacgg 20483364  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||| ||| |||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  20483365 tgtttatttgactcaagttgaaagattag-ctttgatcaagtgcagatccgatcaatgacaatg 20483427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 385 - 574
Target Start/End: Complemental strand, 2555418 - 2555230
Alignment:
Q  385 aagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    |||||||||||||| |||| ||||||||||| ||| |||||||||||||||||||||| ||||| ||| ||||||||||||| | |  |||||| |||||    
T  2555418 aagtgatttcacattttttttgttttctttcgtttgtttttatgatttcgtcgtctctgaacgactctgtttgttttgatttccagtatttgtgcggtgt 2555319  T
Q  485 gttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
     ||||||||||  |||||||||| ||||||||||||||||||||||||| |||||  |||||| |||||||||| |||||||||||||||    
T  2555318 attttttattttccgtcttagtgtggtgtttatttgattcaggttgaaatattag-ctttgagaaagtgcagatccgatcaatgacaatg 2555230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 362 - 558
Target Start/End: Original strand, 12891706 - 12891901
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||||||| ||||||  |||| ||| ||||| ||    
T  12891706 ttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgttgtctctgcacgactctgtttgtatt 12891805  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    |||||  || ||||||| ||||||||||| ||||  | ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||    
T  12891806 gatttcacgtctttgtgcggtgtgtttttaattttccatcttagtgcggtgtttatttgatccaggttgaaagattag-ctttgagcaagtgcagat 12891901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 388 - 574
Target Start/End: Complemental strand, 7771887 - 7771701
Alignment:
Q  388 tgatttcacatattttct-gttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgt 486  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||||||||||||| ||||| ||| ||||||||||||| ||| |||||||  ||||||    
T  7771887 tgatttcacatatttttttgttttctttcatttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgtgctgtgtgt 7771788  T
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||  | |||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||| |||||||||||||||    
T  7771787 ttttgattttccatcttagtgcggtgtttatttgattcaagttgaaagatta-actttgagcaagtgcagatccgatcaatgacaatg 7771701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 27241088 - 27241305
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||| | |||||   | ||    
T  27241088 aattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctttgaacgaccttgtt 27241187  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    | ||||||||| ||| ||||||| ||||||||| | ||||| ||| |||||  ||||||| ||||||||||||| |||||||||  ||||| ||||||||    
T  27241188 tattttgatttcccgtctttgtgcggtgtgtttctgatttcccgttttagtatggtgtttgtttgattcaggttcaaagattag-ctttgatcaagtgca 27241286  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  27241287 gatccgatcaatgacaatg 27241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 178201 - 177984
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctct--aaacgaatctatt 455  Q
    |||| ||| ||| ||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||    |||| ||| ||    
T  178201 ttgtgtttccttatatcctaattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctgcgcacgactctgtt 178102  T
Q  456 tgttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    ||||||||||| | | ||||||| |||||||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||   |||||||||||     
T  178101 tgttttgatttcctggctttgtgcggtgtgttttttgatttcccgtcgtggtgcggtgtttatttgattcaggttgaaagattag--cttgagcaagtgt 178004  T
Q  555 agattcgatcaatgacaatg 574  Q
    ||||  ||||||||||||||    
T  178003 agatctgatcaatgacaatg 177984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 378 - 574
Target Start/End: Complemental strand, 11734892 - 11734699
Alignment:
Q  378 attgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgt 477  Q
    |||||| |||||||||||||||||||||  |||||||  |||  |||| |||||||||||||||| ||||| ||| ||||||||||||| ||| ||||||    
T  11734892 attgaataagtgatttcacatattttct--tttctttagtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcccgtctttgt 11734795  T
Q  478 gtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    | ||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||  |||| |||| ||||||| |||||||||||||||    
T  11734794 gcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcagattgaaagattag-ctttgcgcaactgcagatccgatcaatgacaatg 11734699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 359 - 574
Target Start/End: Complemental strand, 26295152 - 26294937
Alignment:
Q  359 tgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttattttta-tgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||| |||||||||| |||||| ||||||||| ||| ||||||| ||||||||| ||| |||||| |||  ||||||||||| ||||| ||| ||||    
T  26295152 tgtttttccttctatccttattgaataagtgatttaacaaattttctattttctttcttttgtttttagtgagatcgtcgtctctgaacgactctgtttg 26295053  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||| || ||| |||| || | ||||| ||| ||||  |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  26295052 ttttgacttcccgtctttttgcgatgtgtctttgattttccgtcttagtgcggtgtttatttgattcaggttgaaatattag-ttttgagcaagtgcaga 26294954  T
Q  558 ttcgatcaatgacaatg 574  Q
    |  ||||||||||||||    
T  26294953 tctgatcaatgacaatg 26294937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 23882213 - 23881996
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  |||||||| ||||||| ||||||||| ||||||||| | |||||| || ||| ||||| |||||||||||||||| |||||  || ||    
T  23882213 aattgtttttctttctatccaaattgaataagtgatttgacatattttatattttctatcgtttgtttttgtgatttcgtcgtctctgaacgaccctgtt 23882114  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| ||||  || |||| || ||||| ||||| ||||   ||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||    
T  23882113 tgtttttatttctcgtctttatgcggtgtttttttgattttcagtcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtaca 23882015  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  23882014 gatccgatcaatgacaatg 23881996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 6681969 - 6681756
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||| ||||  ||||||| ||||||||||||||||||||  ||  ||||| ||| ||||| | ||||||| ||||||| |||  ||| ||||    
T  6681969 ttgtttttccttttatctgaattgaataagtgatttcacatattttcaatt--ctttcgtttgtttttgtaatttcgttgtctctacacggctctgtttg 6681872  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||| |||||||||||||||||||||||| |||||||||| | |||||||||||||||| ||||||| ||| ||| |    
T  6681871 ttttgatttaccgtctttgtgcggtgtattttttatttctcgtcttagtgcgatgtttatttgttccaggttgaaagattag-ttttgagtaagcgcaaa 6681773  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  6681772 tccgatcaatgacaatg 6681756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 389 - 574
Target Start/End: Original strand, 23428306 - 23428493
Alignment:
Q  389 gatttcacatattttctgttttct---ttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtg 485  Q
    ||||||||||||||| |||||| |   ||  ||| ||||| | |||||||||||||| || || | | ||||||||||||| ||| ||||||| ||||||    
T  23428306 gatttcacatattttttgttttttcgttttgttttttttttttatttcgtcgtctctgaatgactttgtttgttttgatttcccgtctttgtgcggtgtg 23428405  T
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||||| |||| |||||||||||||||    
T  23428406 tttttgatttctcgtcttagtgcggtgtttatttgattcaggtagaaagattag-ctttgagcaagtgtagatccgatcaatgacaatg 23428493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 17687231 - 17687442
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| |||||||| |||| ||||||||||||||| |||||||||  ||| ||||| ||||||||| ||||||  |||| ||| |||     
T  17687231 ttgtttttccttctatcttaattgaataagttatttcacatattttcagttttcttttgtttgtttttgtgatttcgttgtctctgcacgactctgtttc 17687330  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| |||  ||||||  |||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||   ||||||||| |||| |    
T  17687331 ttttgatttcccgtttttgtgcagtgtgtttttgatttcccatcttagtacggtgtttatttgattcagattgaaagatta-aatttgagcaaatgcata 17687429  T
Q  558 ttcgatcaatgac 570  Q
    | |||||||||||    
T  17687430 tccgatcaatgac 17687442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 360 - 570
Target Start/End: Original strand, 25961953 - 25962156
Alignment:
Q  360 gttttttcttctatcctaattgaacaagtgatttc-acatatttt-ctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||| ||| |||||||||| || |||||||||| ||||||||| | |||||||||| ||| ||||| ||||||||||||        || |||  |||    
T  25961953 gtttttccttatatcctaattaaataagtgatttctacatatttttcagttttctttcctttgtttttgtgatttcgtcgt--------gactctgattg 25962044  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || ||||||| | ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25962045 ttttgatttctcgtctttgtgcgctgtgtttttaatttctcgtcttagtgcagtgtttatttgattcaggttgaaagattag-ttttgagcaagtgcaga 25962143  T
Q  558 ttcgatcaatgac 570  Q
    |  ||||||||||    
T  25962144 tctgatcaatgac 25962156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 981120 - 980909
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| ||||||||| |||||||||||||||||  |||   ||||||||| | |||  ||||| ||||||||| ||| | ||| | ||    
T  981120 ttgtttttccttctatcataattgaacgagtgatttcacatatttaatgt---ctttcatttgtatttgcgattttgtcgtctctgaaccactctgtatg 981024  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||   ||| ||||  |||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  981023 ttttgatttcccattttt-tgtgcggtgtgtttgacttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 980926  T
Q  558 ttcgatcaatgacaatg 574  Q
    | ||| |||||||||||    
T  980925 tccgagcaatgacaatg 980909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 454 - 574
Target Start/End: Complemental strand, 17732385 - 17732266
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  17732385 tttgtttttattttccgtctttgtgcggtgtgttttttatttcccatcttagtgcggtgtttatttgattcaagttgaaagattag-ctttgagcaagtg 17732287  T
Q  554 cagattcgatcaatgacaatg 574  Q
     | || |||||||||||||||    
T  17732286 taaatccgatcaatgacaatg 17732266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 362 - 569
Target Start/End: Complemental strand, 39531494 - 39531295
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||| |||||||| |||||||| |||||||||||||||||| |||||||||||  ||| ||||| ||||||||| |      ||||| |||  |||||||    
T  39531494 ttttccttctatcgtaattgaataagtgatttcacatattt-ctgttttcttttgtttgtttttgtgatttcgttg------aacgactctgattgtttt 39531402  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    ||||| ||| |||||   |||||||||||||||||   ||||||| || |||||||||||||| ||||||||||||||  |||||| |||||||||| ||    
T  39531401 gatttcccgtctttggacggtgtgttttttatttccactcttagtacgatgtttatttgattcgggttgaaagattag-ctttgagaaagtgcagatccg 39531303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 43493851 - 43494101
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||| ||||||||||         ||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||||    
T  43493851 gaggggtgatttagggtcaattttgatccaaaaatcacctctccgaattgtttttccttctattctaattgaataagtgatttcacatattttttgtttt 43493950  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| ||||||  ||| || |            |||||||||||| | | ||||||  ||||||||||| ||||  ||| |||||||||    
T  43493951 ctttcgtttgtttttgtgattttttcgcctgt------------ttgttttgatttcctgtctttgtacggtgtgtttttgattttccgttttagtgcgg 43494038  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||| ||   |||||||||||||| || | |||||||||||||    
T  43494039 tgtttatttgattcaggttgaaagacta-actttgagcaagtgcatatccaatcaatgacaatg 43494101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 375 - 570
Target Start/End: Original strand, 12215177 - 12215369
Alignment:
Q  375 ctaattgaacaagtgat-ttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcct 473  Q
    |||||||||||  |||| ||||||||||||  || ||||||| |||  || | ||||||||||||||| |  ||| ||| ||||||||||||||| | ||    
T  12215177 ctaattgaacagatgatcttcacatatttttagtcttctttcgtttgcttatgtgatttcgtcgtctcca--cgactctgtttgttttgattttctgtct 12215274  T
Q  474 ttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||| | || |||||||| ||||||| ||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||| || |||||||||||    
T  12215275 ttgagcggggtgtttttgatttctcatcttaatgcggtgtttatttgattta-gttgaaagattag-ttttgagcaagtgcatatccgatcaatgac 12215369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 472 - 564
Target Start/End: Original strand, 11858050 - 11858141
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatc 564  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||    
T  11858050 ctttgtgcggtgtattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtgcagatccgatc 11858141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 458 - 570
Target Start/End: Original strand, 14535024 - 14535135
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||||||||||| ||||| ||||||||||||||||||| | |||||||||| |  ||||| |||||| |||    
T  14535024 ttttgatttcccgtctttgtgcggtgtgttttttatttctcatcttaatgcggtgtttatttgattcggattgaaagatt-ggctttgatcaagtgtaga 14535122  T
Q  558 ttcgatcaatgac 570  Q
    ||| |||||||||    
T  14535123 ttcaatcaatgac 14535135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 356 - 470
Target Start/End: Complemental strand, 12439731 - 12439617
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  |||||||||| ||||| ||||||||||| ||||||| ||||||||||| ||| ||||| |||||||||||| | | || || ||| ||    
T  12439731 aattgtttttcattctatcctagttgaataagtgatttcatatattttttgttttctttcgtttgtttttgtgatttcgtcgtttttgaatgactctgtt 12439632  T
Q  456 tgttttgattttccg 470  Q
    |||||||||||||||    
T  12439631 tgttttgattttccg 12439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 391 - 536
Target Start/End: Original strand, 25487667 - 25487812
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    ||||||||||||||  | ||||||| ||| ||||  |||||||||||||| |  |||| | || |||||||||||||||| || ||||   | | |||||    
T  25487667 tttcacatattttcattgttctttcgtttgttttcgtgatttcgtcgtctttgtacgactttacttgttttgattttccgtctctgtgcaatttcttttt 25487766  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 536  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||    
T  25487767 tatttcccgtcttagtgcattgtttatttgattcaggttgaaagat 25487812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 376 - 570
Target Start/End: Original strand, 7150860 - 7151048
Alignment:
Q  376 taattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctt 474  Q
    |||||||| |||| ||||| |||||||||| || ||| ||| ||| ||||| ||| |||| ||||| || || | ||| |||||||||||||  || |||    
T  7150860 taattgaataagtaatttctacatattttcagtcttccttcgtttgtttttgtgaattcgacgtctttacacaactctgtttgttttgatttctcgtctt 7150959  T
Q  475 tgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||  ||||||||||||||||||      ||||| ||||||||||||||||||||||||| | | ||||||| |||| || ||||||||||||||    
T  7150960 tgtgctgtgtgttttttatttctc------gtgcgatgtttatttgattcaggttgaaagact-ggttttgagtaagtacaaattcgatcaatgac 7151048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 17523504 - 17523406
Alignment:
Q  472 ctttgtgtggtgtgt-tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||| |||||| |||||||| |||| || ||||||    
T  17523504 ctttgtgaggtgtgtatttttatttcccgtcttattgcggtgtttatttgattcaggtcgaaagattag-ttttgatcaagtgcaaattcaattaatgac 17523406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 397 - 567
Target Start/End: Complemental strand, 35276044 - 35275873
Alignment:
Q  397 atattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatcta-tttgttttgattttccgcctttgtgtggtgtgtttttt-att 494  Q
    |||||||| || ||||||| ||| ||||| |||||| ||||||| |  |||| |||| ||||||||||||| ||| |||||||  |||||||| || |||    
T  35276044 atattttcagtcttctttcgtttgtttttgtgattttgtcgtctttgcacgactctaatttgttttgatttaccgtctttgtgcagtgtgtttgttgatt 35275945  T
Q  495 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    || ||||||  |||| |||||||||||||| ||||||||| ||||  ||||||||||| ||||| | ||||||    
T  35275944 tcccgtctttatgcgatgtttatttgattccggttgaaaggttag-ctttgagcaagtacagatccaatcaat 35275873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 463 - 555
Target Start/End: Original strand, 39915624 - 39915715
Alignment:
Q  463 attttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||| | ||||||| ||| |||||||||||||  ||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  39915624 attttcagtctttgtgcggtatgttttttatttcctgtcatagtgcggtgtttattttattcaggttgaaagattag-ctttgagcaagtgca 39915715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 3079300 - 3079214
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||||||||| ||||||||||||||  ||||||||||| |  ||||||||||||||||| |||||||||||||||    
T  3079300 ttttcatttcccgtcttagtgcgatgtttatttgattcgagttgaaagatttg-ctttgagcaagtgcagatccgatcaatgacaatg 3079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 472 - 543
Target Start/End: Original strand, 18573459 - 18573530
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||| |||||| ||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  18573459 ctttgtgcggtgtgcttttgctttctcgttttagtgcggtgtttatttgattcaggttgaaaaattagtttt 18573530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 458 - 543
Target Start/End: Complemental strand, 9196833 - 9196749
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||| ||||||||||||||||| ||||||||||||||| |||||||| |||| |||||||||||  |||||| ||| |||||||||    
T  9196833 tttttattttccgcctttgtgtagtgtgttttttatttttcgtcttaatgcgctgtttatttgacccaggtt-aaaaattagtttt 9196749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 358 - 466
Target Start/End: Complemental strand, 3079400 - 3079292
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||| |||| |||||||| ||||||||| |||||||||||| ||| |||| ||| ||||| |||||| ||||||||| ||||| | | ||||    
T  3079400 ttgtttttccttatatcataattgaataagtgatttaacatattttctgctttttttcgtttgtttttgtgattttgtcgtctctgaacgactttgtttg 3079301  T
Q  458 ttttgattt 466  Q
    |||| ||||    
T  3079300 ttttcattt 3079292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 502 - 574
Target Start/End: Complemental strand, 12439614 - 12439543
Alignment:
Q  502 ttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||| |||||||||||||||  |||||||||||| |||| ||||||| |||||||    
T  12439614 ttagtgcggtgtttatttgatttaggttgaaagattag-ctttgagcaagtgaagatccgatcaacgacaatg 12439543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 486 - 570
Target Start/End: Complemental strand, 26905604 - 26905521
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||| |||| | |||||| || ||||||||| |||||||||    
T  26905604 ttttttatttctcgtcttaatgtggtgtttatttgattcaggtggaaatatta-tctttgaggaaatgcagattcaatcaatgac 26905521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 391 - 538
Target Start/End: Complemental strand, 26240740 - 26240593
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt-gtgtggtgtgtttt 489  Q
    |||||||||||||| ||||||||| |||| || || ||||||||||||| | | |||| | | ||| |||||||||| |   ||| |||   ||||||||    
T  26240740 tttcacatattttcagttttcttttatttgttattgtgatttcgtcgtc-caacacgactttgtttattttgatttttcaatttttgtgcaatgtgtttt 26240642  T
Q  490 ttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||  |||||||||| | |||||||||||||||||||||| |||||    
T  26240641 ttattttccgtcttagtgtgatgtttatttgattcaggttgaacgatta 26240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 555
Target Start/End: Original strand, 34906302 - 34906375
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||||||| |||||||||||   ||||||||||||| |||||||||| ||||  ||||||||||||||    
T  34906302 gtgtgttttttatttttcgtcttagtgtaatgtttatttgattaaggttgaaagtttag-ctttgagcaagtgca 34906375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 555
Target Start/End: Original strand, 32309226 - 32309386
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttttt-at 493  Q
    |||||||||  |||||||||| ||| ||||| | |||||||||||| |  |||| ||  |||||||||||||  ||  |||||| | ||||||| || ||    
T  32309226 acatatttttagttttctttcttttgtttttgtaatttcgtcgtctttgcacgactcagtttgttttgatttctcgtatttgtgcgatgtgtttgttgat 32309325  T
Q  494 ttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||  ||||||||| || | |||||||||||||||||| |||||||   ||||||||||||||    
T  32309326 tttccgtcttagtacgatatttatttgattcaggttgtaagatta-actttgagcaagtgca 32309386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 567
Target Start/End: Original strand, 35402161 - 35402269
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||  | |||||||||||| |||||| |||| || || |  |||  ||||||||||||||||||||||||||||   ||||| ||||||||||    
T  35402161 ttttgattttatgtctttgtgtggtgcgtttttgatttttcatcctcatgcaatgtttatttgattcaggttgaaagatta-actttgaacaagtgcaga 35402259  T
Q  558 ttcgatcaat 567  Q
    |||| |||||    
T  35402260 ttcggtcaat 35402269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 566
Target Start/End: Complemental strand, 20187604 - 20187493
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    |||||||| |||||||| ||||||| | ||||||||||||||   |  |||||||| ||||||||||||| ||||| ||||| |||  ||| ||||||||    
T  20187604 tttgtttttattttccgtctttgtgcgatgtgttttttattttctgcattagtgcgatgtttatttgatttaggttaaaagactag-gtttaagcaagtg 20187506  T
Q  554 cagattcgatcaa 566  Q
    | ||||| |||||    
T  20187505 cggattcaatcaa 20187493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 454 - 528
Target Start/End: Original strand, 1419153 - 1419227
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggt 528  Q
    |||||||| ||||| || ||||||| | ||| ||||||| ||  ||||||| |||||||||||||||||||||||    
T  1419153 tttgttttcatttttcgtctttgtgcgctgtattttttaatttacgtcttaatgcggtgtttatttgattcaggt 1419227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 39532332 - 39532252
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||||| | | ||||||| ||||| ||||||||||  |||||| || | |||||||||  ||||||||||||||||||    
T  39532332 ttttgatttcctgtctttgtgcggtgtattttttattttccgtctttgtactgtgtttattatattcaggttgaaagatta 39532252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 480 - 535
Target Start/End: Original strand, 374430 - 374485
Alignment:
Q  480 ggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaaga 535  Q
    ||||| ||||||||||   ||||||||||||||||| ||||||||| |||||||||    
T  374430 ggtgtattttttattttctgtcttagtgcggtgtttgtttgattcaagttgaaaga 374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 39415622 - 39415568
Alignment:
Q  486 ttttttatttct-cgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||||| |||||||||  | |||||||||||| ||||||||||||||||    
T  39415622 ttttttatttctgcgtcttagtatgatgtttatttgatgcaggttgaaagattag 39415568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 543
Target Start/End: Original strand, 6639144 - 6639205
Alignment:
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||||||| ||| ||||| ||||  |||||||||||| || ||||||||||| ||||    
T  6639144 tgtgttttttattcctcatcttaatgcgaggtttatttgatttagattgaaagattaatttt 6639205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 539
Target Start/End: Complemental strand, 39531704 - 39531651
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||||  ||||||||| |  || ||||||||||||||||||||||||||    
T  39531704 ttttttattttccgtcttagtacaatgcttatttgattcaggttgaaagattag 39531651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 7771948 - 7771912
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca 356  Q
    |||||||||||||  ||||||||||||||||||||||    
T  7771948 gaggggtgatttagggtcaattttgacccaaaaatca 7771912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 136; Significance: 1e-70; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 7995702 - 7995440
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  7995702 gaggggtgatttagggtcaattttgacccaaaaatcacctctccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 7995603  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||| | ||| ||||| |||| ||||||||||| || || ||| |||||||||||||| || ||||||| ||||||||||| ||||| |||||||||| ||    
T  7995602 cttccttttttttttgtgatatcgtcgtctctgaatgactctgtttgttttgatttttcgtctttgtgcggtgtgtttttgatttcccgtcttagtgtgg 7995503  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||  |||||||||||||| || |||||||||||||||    
T  7995502 tgtttatttgattcaggttgaaagattag-ctttgagcaagtgcatatccgatcaatgacaatg 7995440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 359 - 574
Target Start/End: Original strand, 14265311 - 14265525
Alignment:
Q  359 tgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgt 458  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||||||| | | | ||||| |||||||||||||||| ||||| ||| |||||    
T  14265311 tgtttttccttctatcctaattaaataagtgatttcacatattttctgttttcttacgtatgtttttgtgatttcgtcgtctctgaacgactctgtttgt 14265410  T
Q  459 tttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    |||||||||||| ||||||| ||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  14265411 tttgattttccgtctttgtgcggtgtgtttttgatttcccgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagat 14265509  T
Q  559 tcgatcaatgacaatg 574  Q
     |||||||||||||||    
T  14265510 ccgatcaatgacaatg 14265525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 44517171 - 44517388
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||| ||| ||||| |||||||||||||||| ||||| ||| ||    
T  44517171 aattgtttttccttctatcctaattcaataagtgatttcacatattttctgctttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtt 44517270  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||  ||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||    
T  44517271 tgttttgatttcccttctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtgca 44517369  T
Q  556 gattcgatcaatgacaatg 574  Q
     || |||||||||||||||    
T  44517370 aatccgatcaatgacaatg 44517388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 45750457 - 45750719
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca--------attgttttttc-ttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||        ||||||||||| || ||||||||||||| |||| ||||||||||||||  |||||    
T  45750457 gaggggtgatttaaggtcaattttgacccaaaaatcatcaatccgattgttttttccttttatcctaattgaataagttatttcacatatttttggtttt 45750556  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||| | ||||| | | |||||||||||||  || ||||||| ||||| ||||||||||| |||||||||||||    
T  45750557 ctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgatttatcgtctttgtgcggtgtattttttatttcccgtcttagtgcgg 45750656  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||    
T  45750657 tgtttatttgattcaggttgaaagattagctttt-agcaagtgcagatccgatcaatgacaatg 45750719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 323 - 574
Target Start/End: Original strand, 29205267 - 29205526
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||  ||||||||||||||||||||||         ||||||||| |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  29205267 gggtgatttagggtcaattttgacccaaaaatcaccccttggaattgtttttccttctatcataattgaataagtgatttcatatattttctgttttctt 29205366  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    |  ||| ||||| |||||||||||||||| ||||| ||| |||||||||||||  || ||||||| ||||||||||| ||||| ||||||||||||||||    
T  29205367 ttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttcacgtctttgtgcggtgtgtttttgatttcccgtcttagtgcggtgt 29205466  T
Q  514 ttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||| ||| ||  |||||||||||| |||| |||||||||||||||    
T  29205467 ttatttgattcaggttgaatgatcag-ctttgagcaagtgtagatccgatcaatgacaatg 29205526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 320 - 570
Target Start/End: Original strand, 12871600 - 12871858
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          ||||||||  || ||||||||| ||| |||||||||||||||||||| |||||    
T  12871600 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttcattatatcctaatcgaataagtgatttcacatattttcagtttt 12871699  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||| |  |||| ||| ||||||||||||| ||| ||||||| ||||||||||||||||||| ||||||||||     
T  12871700 ctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttctcatcttagtgcgt 12871799  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  12871800 tgtttatttgatttaggttgaaagattag-ctttgagcaagtgcagattcgatcaatgac 12871858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 37822442 - 37822226
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| ||||| | | ||    
T  37822442 aattgtttttccttctatcctaattgaataagtgatttcacatattttctattttctttcatttgtttttgtgatttcgtcgtctctgaacgactttgtt 37822343  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||| ||| | | |||| || ||| ||||||||||||| ||||||||||| || ||||||||||||||||||||||||||   ||||||||||||||    
T  37822342 tgttttgttttcctgtctttatgcggtatgttttttatttcccgtcttagtgcagtatttatttgattcaggttgaaagatta--ctttgagcaagtgca 37822245  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  37822244 gatccgatcaatgacaatg 37822226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 3232812 - 3233029
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||| |||||||||||| ||| ||||| ||| ||    
T  3232812 aattgtttttccttctatcctaattgaataaatgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtttctgaacgactctgtt 3232911  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| | | |||||||   ||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||  |||||| |||||||    
T  3232912 tgttttgatttcctgtctttgtgctatgtgttttttattttccgtcttagtgcgatgtttatttgattcaggttgaaagattag-ctttgagaaagtgca 3233010  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  3233011 gatccgatcaatgacaatg 3233029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 320 - 575
Target Start/End: Complemental strand, 424433 - 424170
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  424433 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 424334  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| | | ||||||||||||| ||| |||| || | ||||||||||||||  ||||||||| |||    
T  424333 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcgatgtgttttttattttccgtcttagtacgg 424234  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatgg 575  Q
    ||||||||||||  ||||||||||||||   ||||  ||||||||||||||||||||||||||||    
T  424233 tgtttatttgatctaggttgaaagatta-actttgcacaagtgcagattcgatcaatgacaatgg 424170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 356 - 570
Target Start/End: Original strand, 42490917 - 42491130
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||  ||||||| |||||||| |||||||||||||||| ||| |||||||||| ||| ||||| ||||||||||||||||  |||| ||| ||    
T  42490917 aattgtttttcgttctatcttaattgaataagtgatttcacatatcttcagttttctttcgtttgtttttgtgatttcgtcgtctctgtacgactctgtt 42491016  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| ||||||| || |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||    
T  42491017 tgttttgatttcccgtctttgtgcggggtgtttttgatttctcgtcttagtgcggtgtttatttgattcagattgaaagattag-ctttgagcaagtgca 42491115  T
Q  556 gattcgatcaatgac 570  Q
    |||  ||||||||||    
T  42491116 gatcagatcaatgac 42491130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 4882454 - 4882239
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| |   ||||    
T  4882454 ttgtttttcattatatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctcttaacgacttcgtttg 4882355  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||   ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  4882354 ttttgatttcccgtctttgtgcggtgtgtttttgattttctgtcttagtgcggtgtttatttgattcaagttgaaagattag-ctttgagcaagtgcaga 4882256  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||| ||||    
T  4882255 tccgatcaatgataatg 4882239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 28678272 - 28678010
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         |||||||||  ||||||| |||||||| ||||||||||||||||||| | ||||    
T  28678272 gaggggtgatttagggtcaattttgacccaaaaatcactcgtccgaattgtttttcgttctatcataattgaataagtgatttcacatattttatatttt 28678173  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||| | | ||||| ||| |||||||||||||  || |||||||  |||||||||| ||||| |||| ||||||||    
T  28678172 ctttcgtttgtttttgtgatttcgtcgtatttgaacgactctgtttgttttgatttctcgtctttgtgcagtgtgtttttgatttcccgtcctagtgcgg 28678073  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||| |||||||||||||||    
T  28678072 tgtttatttgattcaggttgaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 28678010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 376 - 574
Target Start/End: Complemental strand, 15391329 - 15391132
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt 475  Q
    |||||||| |||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||  |||| |   ||||||||||||| ||| ||||    
T  15391329 taattgaataagtgatttcacatgttttctgttttctttcgtttgtttttgtgatttcgtcgtctctggacgacttcgtttgttttgatttcccgtcttt 15391230  T
Q  476 gtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| || |||||||||||||||    
T  15391229 gtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagatta-tctttgagcaagtgcatatccgatcaatgacaatg 15391132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 10627026 - 10627240
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||||  || ||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| |||||||||||||||| || || ||| ||||    
T  10627026 ttgtttttctttatatcctaattgaataagtaatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaatgactctgtttg 10627125  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||  ||| ||| ||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  10627126 ttttagtttcccgtctttgtgcggtgtgttttttattttccgtcatagtgcggtgtttatttgattcaggttg-aagattag-ctttgagcaagtgcaga 10627223  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  10627224 tccgatcaatgacaatg 10627240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 27534725 - 27534938
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| |||||  || ||||    
T  27534725 ttgtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacga--ctgtttg 27534822  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||| ||||| |||||||||| | |||||||||||||||||||||||||||||  ||||| |||| |||||    
T  27534823 ttttgatttcccgtctttgtgcggtgtgtttttgatttcccgtcttagtgtgatgtttatttgattcaggttgaaagattag-ctttgaacaagagcaga 27534921  T
Q  558 ttcgatcaatgacaatg 574  Q
    |  ||||||| ||||||    
T  27534922 tctgatcaataacaatg 27534938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 13488631 - 13488416
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||| | | |||||||| ||||||||| ||||||||||| ||||||||| ||| ||||| |||||||| ||||||| ||||| ||| ||||    
T  13488631 ttgtttttccttccaccttaattgaataagtgattttacatattttctattttctttcgtttgtttttgtgatttcgccgtctctgaacgactctgtttg 13488532  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| |||||||  |||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||  ||||| |||| |||||    
T  13488531 ttttgatttcccgtctttgtgcagtgttttttttatttcccgtcttagtgcggtgtttatttaattcaggttgaaagattag-ctttgaacaagagcaga 13488433  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  13488432 tccgatcaatgacaatg 13488416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 17347624 - 17347838
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    ||||||||||||||||| |||  ||| |||||||||||||| |||||||||||||||| ||| ||||| ||||||||||||||||  |||| ||| ||||    
T  17347624 ttgttttttcttctatcataaaggaataagtgatttcacatcttttctgttttctttc-tttgtttttgtgatttcgtcgtctctgcacgactctctttg 17347722  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| |||  | |||| | ||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||||  |||||| |||||||||    
T  17347723 ttttgatttcccgtatgtgtgcgatgtgtttttgatttcccgtcttagtgcagtgtttatttgattaaggttgaaagattag-ctttgagtaagtgcaga 17347821  T
Q  558 ttcgatcaatgacaatg 574  Q
    |||||||||||||||||    
T  17347822 ttcgatcaatgacaatg 17347838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 359 - 574
Target Start/End: Complemental strand, 29726690 - 29726477
Alignment:
Q  359 tgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgt 458  Q
    ||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||   |||| ||  |||||    
T  29726690 tgtttttccttatatcctaatcgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctccgcacgactcggtttgt 29726591  T
Q  459 tttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagat 558  Q
    ||||| || ||| ||||||| ||||||||||| ||||| ||||||| ||||||||||| ||||||||||||||||||||||  | |||||||||||||||    
T  29726590 tttga-ttaccgtctttgtgcggtgtgtttttgatttcccgtcttaatgcggtgtttaattgattcaggttgaaagattag-ctctgagcaagtgcagat 29726493  T
Q  559 tcgatcaatgacaatg 574  Q
     |||||||||||||||    
T  29726492 ccgatcaatgacaatg 29726477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 356 - 574
Target Start/End: Original strand, 42276380 - 42276596
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    ||||||||||||||||||| ||||| || || ||||||||||||||||| |||||||||| |||  |||  ||||| |||||||||| ||||| ||| ||    
T  42276380 aattgttttttcttctatcataattaaataactgatttcacatattttcagttttctttcgtttgatttg-tgattacgtcgtctctgaacgactctgtt 42276478  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||| |||| |  ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||    
T  42276479 tgttttgatttcccgtctttatccggtgtgtttttgatttcccatcttagtgcggtgtttatttgattcaggttgaaagattag-ctttaagcaagtgca 42276577  T
Q  556 gattcgatcaatgacaatg 574  Q
    ||| |||||||||||||||    
T  42276578 gatccgatcaatgacaatg 42276596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 320 - 575
Target Start/End: Complemental strand, 33487172 - 33486909
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||| ||||||||||||||||| | ||||||||| ||||||| || |||    
T  33487172 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatcctaattgaatatgtgatttcatatattttatgcttt 33487073  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||| | ||||| ||| |||||||||||||  ||  |||||   |||||||||| ||||| |||||||||||||    
T  33487072 ctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgatttctcgtatttgtacagtgtgtttttgatttcccgtcttagtgcgg 33486973  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatgg 575  Q
    ||||||||||||||||||||||| ||||   ||||||||| |||| || ||||||||||||||||    
T  33486972 tgtttatttgattcaggttgaaaaatta-actttgagcaaatgcaaatccgatcaatgacaatgg 33486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 323 - 539
Target Start/End: Original strand, 20411555 - 20411779
Alignment:
Q  323 gggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctt 413  Q
    ||||||||||  ||||||||||||||||||||||         |||||||||  || ||| | ||||||| |||||||||||||||||||||||||||||    
T  20411555 gggtgatttatggtcaattttgacccaaaaatcacccatccgaattgtttttctttttattcaaattgaataagtgatttcacatattttctgttttctt 20411654  T
Q  414 tcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgt 513  Q
    || ||| |||||  |||||| |||||||||||||| ||| |||||||||||||  || ||||||| |||||| |||| ||||| ||||||||||||||||    
T  20411655 tcgtttgtttttgggatttcatcgtctctaaacgactctgtttgttttgatttctcgtctttgtgcggtgtg-ttttgatttcccgtcttagtgcggtgt 20411753  T
Q  514 ttatttgattcaggttgaaagattag 539  Q
    ||||||||||||||||||||||||||    
T  20411754 ttatttgattcaggttgaaagattag 20411779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 385 - 539
Target Start/End: Complemental strand, 15791343 - 15791189
Alignment:
Q  385 aagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||| ||||||||||||||||||||| ||| ||||| ||||||| |||||||| ||||| ||| |||||||||||||   | |||||||||||||    
T  15791343 aagtgatttaacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgatttcgagtctttgtgtggtgt 15791244  T
Q  485 gttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  15791243 gttttttatttctcaccttagtgcggtgtttatttgattcaggttgaaagattag 15791189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 361 - 574
Target Start/End: Complemental strand, 45193718 - 45193508
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||| ||| ||||| |||||| ||||||| ||| | | |||||||||||    
T  45193718 tttttccttctatcctaattgaataagtgatttcacatattttccgtttcctttcgtttgtttttgtgattttgtcgtctttaatctactctatttgttt 45193619  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    ||||||  || ||||||  ||||||  ||| ||||| ||||||||| |||||||||||||| |||||||||||||||||  ||||||||||||| ||| |    
T  45193618 tgatttctcgtctttgtacggtgtg--tttgatttcccgtcttagtacggtgtttatttgaatcaggttgaaagattag-ctttgagcaagtgctgatcc 45193522  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  45193521 gatcaatgacaatg 45193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 387 - 574
Target Start/End: Complemental strand, 33939081 - 33938893
Alignment:
Q  387 gtgatttcacata--ttttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    |||||||||||||  |||||||||||||||| ||| ||||| |||||||||| ||||| ||||| ||| ||||||||||||||||| ||||||| || ||    
T  33939081 gtgatttcacataaattttctgttttctttcgtttgtttttgtgatttcgtcatctctgaacgactctgtttgttttgattttccgtctttgtgcggcgt 33938982  T
Q  485 gttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||  ||||||||||||||| ||||||| || |||||||||||||||  ||||||||||| ||||| | |||||||||||||    
T  33938981 gttttttattttccgtcttagtgcggtgcttatttggtttaggttgaaagattag-ctttgagcaagtacagatccaatcaatgacaatg 33938893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 18343640 - 18343853
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | ||||| ||  |||||||||||||||||||||||||||||| ||| ||||| ||||||||| |||| | ||||| ||| ||||    
T  18343640 ttgtttttccttctaccttaattaaatgagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgt-gtctttgaacgactctgtttg 18343738  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    || ||||||  || ||||||| ||| ||||||| ||||| ||||||||||||||||||| ||||||||||||||||||||||  ||||| |||| |||||    
T  18343739 ttctgatttctcgtctttgtgcggtatgtttttgatttcccgtcttagtgcggtgttta-ttgattcaggttgaaagattag-ctttgaacaagagcaga 18343836  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  18343837 tccgatcaatgacaatg 18343853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 358 - 484
Target Start/End: Original strand, 51418040 - 51418165
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| | |||||||||||||| ||||| ||| ||||    
T  51418040 ttgtttttccttctatcctaattgaa-aagtgatttcacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttg 51418138  T
Q  458 ttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||||| ||||||| |||||    
T  51418139 ttttgattttccgtctttgtgcggtgt 51418165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 321 - 484
Target Start/End: Original strand, 32784088 - 32784260
Alignment:
Q  321 aggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttc 411  Q
    ||||||||||||  ||||||||||||||||||||||         ||||||||| |||||||||| |||||| |||||||||||||||||||||||||||    
T  32784088 aggggtgatttagggtcaattttgacccaaaaatcacccctccgaattgtttttccttctatccttattgaataagtgatttcacatattttctgttttc 32784187  T
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    |||  ||| ||||| |||||||||||||||| ||||| | | ||| ||||||||||||| ||| ||| |||||    
T  32784188 ttttgtttgtttttgtgatttcgtcgtctctgaacgactatgtttcttttgattttccgtcttagtgcggtgt 32784260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 391 - 570
Target Start/End: Original strand, 13999025 - 13999203
Alignment:
Q  391 tttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    |||||||||||||| || || |||| ||| ||||||||||| |||| | | |  |||| ||| |||||||||||||  || ||||||||| |||||||||    
T  13999025 tttcacatattttcagtattatttcgtttgtttttatgattacgtcatttttgtacgactctgtttgttttgatttatcgtctttgtgtgatgtgttttt 13999124  T
Q  491 tatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||| |||||||||| || |||||||||||||||||||| |||||||   ||||||||| ||||||||| |||||||||    
T  13999125 tatttttcgtcttagtacgatgtttatttgattcaggttgtaagatta-actttgagcaaatgcagattcaatcaatgac 13999203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 358 - 570
Target Start/End: Original strand, 32878733 - 32878945
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttat---gatttcgtcgtctctaaacgaatctat 454  Q
    |||||||| | |||||||||||| || ||||| |||||||||||| |  ||||||||| ||| ||||| |   ||||||||||||  |  |||| | |||    
T  32878733 ttgtttttccctctatcctaattaaataagtg-tttcacatattt-caattttctttcgtttgttttttttttgatttcgtcgtcattgcacgactttat 32878830  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| |||   ||||  ||||||||||| ||||  ||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||    
T  32878831 ttgttttgatttcccgttcttgtacggtgtgtttttgattttccgtcttagtacggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgc 32878929  T
Q  555 agattcgatcaatgac 570  Q
    |||| |||||||||||    
T  32878930 agatccgatcaatgac 32878945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 570
Target Start/End: Complemental strand, 29069883 - 29069725
Alignment:
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagt-gcgg 510  Q
    |||| ||| |||||||||||||||||||| || |||| ||| ||||||||||||||  | ||||||| | ||||||||| ||||||||| ||||| | ||    
T  29069883 tttcgtttgtttttatgatttcgtcgtctttacacgactctgtttgttttgattttatgtctttgtgcgatgtgtttttgatttctcgttttagtggggg 29069784  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||||| |||||||||||  |||||| |||||||| |||| |||||||||    
T  29069783 tgtttatttgattcagattgaaagatta-attttgatcaagtgcatattcaatcaatgac 29069725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 412 - 570
Target Start/End: Original strand, 47551177 - 47551332
Alignment:
Q  412 tttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggt 511  Q
    |||| ||| ||||| ||||||||||||||||  |||| |||  ||||||||||||| || | ||||| ||||||||||||||||| ||||| ||||| ||    
T  47551177 tttcgtttgtttttgtgatttcgtcgtctctgcacgactct--ttgttttgatttttcggccttgtgcggtgtgttttttatttcccgtctcagtgctgt 47551274  T
Q  512 gtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||| |||||| |||||||||||||||  ||||||||||||||||| | |||||||||    
T  47551275 gtttaattgatttaggttgaaagattag-ctttgagcaagtgcagatccaatcaatgac 47551332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 481 - 574
Target Start/End: Complemental strand, 4871005 - 4870913
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||  ||||||||||||||||| |||||||||||||||    
T  4871005 gtgtgttttttatttctcatcttagtgcggtgtttatttgattcagattgaaaaattag-ctttgagcaagtgcagatccgatcaatgacaatg 4870913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 361 - 570
Target Start/End: Complemental strand, 28399414 - 28399213
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgattt-cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtt 459  Q
    ||||| ||| |||| ||||| || ||||||||| ||||||||||  |||||||||| ||| ||||| ||||||||||||        || ||| ||| ||    
T  28399414 tttttccttatatcataattaaataagtgattttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgt--------gactctgtttatt 28399323  T
Q  460 ttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagatt 559  Q
    ||||||| ||| ||||||| |||||||||||||||||  |||||| |||||| ||||||||||||| ||||||| |||||  |||||||||||||||||     
T  28399322 ttgatttcccgactttgtgcggtgtgttttttatttcctgtcttaatgcggtatttatttgattcatgttgaaatattag-ctttgagcaagtgcagatc 28399224  T
Q  560 cgatcaatgac 570  Q
    | |||||||||    
T  28399223 caatcaatgac 28399213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 32301464 - 32301545
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||| |||||||  ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32301464 ttttaattttccatctttgtgcggtgtgttttttatttctcgtcttaatgcggtgtttatttgattcaggttgaaagattag 32301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 395 - 570
Target Start/End: Complemental strand, 24114737 - 24114563
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatt 494  Q
    ||||||||||  | || ||| |||| ||||| ||||||||| |||| || |||| | | |||||||||||||  || ||||||| ||||||||||| |||    
T  24114737 acatattttcaatattattttatttgtttttgtgatttcgttgtctttacacgactttgtttgttttgatttctcgtctttgtgcggtgtgtttttaatt 24114638  T
Q  495 tctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |    ||||| |||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||| |||||||||    
T  24114637 taatatcttaatgcgatgtttatttgattcaagttgaaagattagtgttt-agcaagtgcagattcaatcaatgac 24114563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 484 - 570
Target Start/End: Complemental strand, 9298385 - 9298300
Alignment:
Q  484 tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||    
T  9298385 tgttttttatttcccatcttagtgcggtgtttatttgattcaggttgaaagatta-actttgagcaagtgcagatccgatcaatgac 9298300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 427 - 538
Target Start/End: Complemental strand, 2513629 - 2513515
Alignment:
Q  427 tgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtt---ttttatttctcgtcttagtgcggtgtttatttgatt 523  Q
    |||||||||||||| |  |||| ||||||||||||||||||||| ||||||| ||||||||   |||||||||  ||||||||||||||||| |||||||    
T  2513629 tgatttcgtcgtcttttcacgactctatttgttttgattttccgtctttgtgcggtgtgtttttttttatttcatgtcttagtgcggtgtttgtttgatt 2513530  T
Q  524 caggttgaaagatta 538  Q
    |||  ||||||||||    
T  2513529 cagactgaaagatta 2513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 356 - 533
Target Start/End: Complemental strand, 33125903 - 33125725
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||| ||||| |  |||||||| |||||||||| ||||| |||  || ||||||  ||| ||||| ||||||||| ||||||  || | ||| |    
T  33125903 aattgtttttccttcttttataattgaataagtgatttccacataattttagtattcttttctttgtttttgtgatttcgttgtctctgcacaactctgt 33125804  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaa 533  Q
    |||||||||||||   |||||||  | ||||||||||||||||||||||| || |||||||||| |||||||| |||||    
T  33125803 ttgttttgattttgtacctttgtacgatgtgttttttatttctcgtcttaatgtggtgtttattggattcaggctgaaa 33125725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 32784245 - 32784320
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||||||||||||||||| |||||||||||  |||||||||||||| ||||||||||| ||||||    
T  32784245 cgtcttagtgcggtgtttatttgattcaggctgaaagattag-ctttgagcaagtgcaaattcgatcaataacaatg 32784320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 39080914 - 39080799
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||||||| ||| |||||| || || ||| || |||| |||||||||||| |||||||||||||||| ||| ||||||||| |||||||||||||    
T  39080914 tttgttttgatttcccgtctttgtatgatgagttcttgatttttcgtcttagtgcagtgtttatttgattcatgttaaaagattag-ttttgagcaagtg 39080816  T
Q  554 cagattcgatcaatgac 570  Q
     |||||| |||| ||||    
T  39080815 tagattcaatcagtgac 39080799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 484 - 571
Target Start/End: Original strand, 13869790 - 13869875
Alignment:
Q  484 tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||| |||| | ||||||||||    
T  13869790 tgttttttatttc-cgtcttagtgcggtgtttatttgatttaggttgaaagattag-ttttgaacaagtgtagatccaatcaatgaca 13869875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 29938360 - 29938474
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||| ||||||||||| ||||||  | ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||| |||   |||| ||||||    
T  29938360 tttgtgttgattttccgtctttgttcgatgtgtttttgatttctcgtcctagtgcggtgtttatttgatttatgttgaaagaatag--cttgatcaagtg 29938457  T
Q  554 cagattcgatcaatgac 570  Q
    ||||| | |||||||||    
T  29938458 cagatccaatcaatgac 29938474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 498 - 574
Target Start/End: Original strand, 51418150 - 51418225
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||| || |||||||||||||||    
T  51418150 cgtctttgtgcggtgtttatttgattcaggtggaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatg 51418225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 385 - 567
Target Start/End: Original strand, 8737403 - 8737584
Alignment:
Q  385 aagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtg 483  Q
    |||||||||| |||||||||| || |||||||  || || |||||||||| || ||| |   ||| ||||||||||||||||| ||| |||||||   ||    
T  8737403 aagtgatttccacatattttcagtcttctttcggttgttgttatgatttcatcatctttgcgcgattctatttgttttgatttaccgtctttgtgcaatg 8737502  T
Q  484 tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    | ||  | || ||| |||||||||| ||||||||||||||||||||||||||||||  |||||| |||||||||| | ||||||    
T  8737503 t-ttgctgatatctagtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgagtaagtgcagatccaatcaat 8737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 395 - 538
Target Start/End: Original strand, 10782564 - 10782707
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatt 494  Q
    ||||||||||  | || ||| |||| ||||| |||||||||| | | || |||| | | |||||||||| || ||| ||||||| |||||||||||||||    
T  10782564 acatattttcaatcttattttatttgtttttgtgatttcgtcatttttacacgattttgtttgttttgacttcccgtctttgtgcggtgtgttttttatt 10782663  T
Q  495 tctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||| |||||||||   |||||||||||||  |||||||||||||    
T  10782664 tcttgtcttagtgtaatgtttatttgattttggttgaaagatta 10782707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 483 - 570
Target Start/End: Complemental strand, 26097975 - 26097889
Alignment:
Q  483 gtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||| |||| |||||||||| |||| ||||||||||||||||||||| |||||  ||||||||||||||||||| || ||||||    
T  26097975 gtgtttttgatttttcgtcttagtacggtatttatttgattcaggttgaaaaattag-ctttgagcaagtgcagattccattaatgac 26097889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 454 - 543
Target Start/End: Complemental strand, 40862817 - 40862729
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttt 543  Q
    |||||||||||||| |  ||||||| | |||||||||||||| || |||||| ||| |||||||||||||||| ||||||||||||||||    
T  40862817 tttgttttgatttttcatctttgtgcg-tgtgttttttatttttcatcttagagcgatgtttatttgattcagattgaaagattagtttt 40862729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 482 - 570
Target Start/End: Original strand, 10304728 - 10304815
Alignment:
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||| ||||||| |||||  |||||| ||||| |||||| |||||||||    
T  10304728 tgtgtatttgatttctcgtcttagtgtggtgtttatttgattcaagttgaaatattag-ctttgagaaagtggagattcaatcaatgac 10304815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 395 - 566
Target Start/End: Complemental strand, 29551807 - 29551637
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttt-tttat 493  Q
    |||||||||| ||| |||||  ||||||||| |||||||| |||||   | ||| | | ||| |||||||||| || ||||| | | ||||||| |||||    
T  29551807 acatattttcagttatctttggtttatttttgtgatttcggcgtctagca-cgactttgtttattttgatttttcgtctttgagcgatgtgtttctttat 29551709  T
Q  494 ttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
    ||| | |||||||| ||||||||||||||| ||||||||| ||||| |||||| |||||||| |||| |||||    
T  29551708 ttcccttcttagtgtggtgtttatttgattaaggttgaaatattag-ttttgatcaagtgcatattcaatcaa 29551637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 481 - 569
Target Start/End: Original strand, 38783216 - 38783303
Alignment:
Q  481 gtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||||||||||||||||||||||||| | |||||||||||| ||| |||||||||||   ||||| ||||||||||| | ||||||||    
T  38783216 gtgtgttttttatttctcgtcttagtgtgatgtttatttgatccagtttgaaagatta-actttgatcaagtgcagatgcaatcaatga 38783303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 400 - 570
Target Start/End: Complemental strand, 50107967 - 50107797
Alignment:
Q  400 ttttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcg 499  Q
    ||||| |||||||||| ||| ||||| ||||||||||||||| | |||| | | ||| |||| ||||| || ||||||  |   ||||||| ||||| ||    
T  50107967 ttttcagttttctttcgtttgtttttgtgatttcgtcgtctc-acacgattttgtttattttaatttttcgtctttgtaggacatgtttttgatttcccg 50107869  T
Q  500 tcttagtgcggtgtttatttgattcaggttgaaagatta-gtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||||||||||||||| | ||||||| ||||    ||||| |||||||| |||| |||||||||    
T  50107868 tcttagtgcggtgtttatttgatttatgttgaaaaattatagctttgatcaagtgcaaattcaatcaatgac 50107797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 8937752 - 8937866
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    |||||||| |||| ||  ||||| | ||||| ||||| |||||| |||||| ||||||||||||||||||||  ||||||||||||  |||||||||  |    
T  8937752 tttgttttaatttcccatctttgggcggtgtatttttgatttcttgtcttaatgcggtgtttatttgattcaaattgaaagattag--tttgagcaaagg 8937849  T
Q  554 cagattcgatcaatgac 570  Q
     |||||| |||||||||    
T  8937850 tagattcaatcaatgac 8937866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 454 - 570
Target Start/End: Original strand, 28082258 - 28082375
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttt-tattt-ctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    |||||||| |||||||| |||| |||||||||||||| ||||| || ||||||| ||  ||||||||||||||| ||  ||||||||| || ||| ||||    
T  28082258 tttgttttaattttccgtctttatgtggtgtgtttttctatttccttgtcttagcgcaatgtttatttgattcatgtcaaaagattag-ttgtgatcaag 28082356  T
Q  552 tgcagattcgatcaatgac 570  Q
    |||| |||| |||||||||    
T  28082357 tgcatattcaatcaatgac 28082375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 567
Target Start/End: Original strand, 8925288 - 8925422
Alignment:
Q  431 ttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttg 530  Q
    |||||||||| |  |||||| | |||||||| |||||||| ||||| || || | |||||||||||  |||||| |||| ||||| |||||||||  ||     
T  8925288 ttcgtcgtctttgcacgaatttgtttgttttaattttccgtctttgggtagtatattttttatttcctgtcttaatgcgatgtttttttgattcaaatta 8925387  T
Q  531 aaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    |||||||||  |||||||||| ||| |||| ||||||    
T  8925388 aaagattag--tttgagcaagggcaaattcaatcaat 8925422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 445 - 570
Target Start/End: Complemental strand, 25033096 - 25032972
Alignment:
Q  445 acgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    |||| ||||||| |||||||||  |  |||||||| ||||| ||||  |||| | ||||| || ||||||||||||||||||||||  ||||||   |||    
T  25033096 acgactctatttattttgatttctcatctttgtgtagtgtggttttgttttcccatcttaatgtggtgtttatttgattcaggttgtgagatta-acttt 25032998  T
Q  545 gagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||| |||| |||||||||    
T  25032997 gagcaagtgcaaattcaatcaatgac 25032972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 486 - 570
Target Start/End: Original strand, 29802780 - 29802863
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||||   |||||||| ||||||||||||||||  ||||||||| ||| |||||| ||||||||||| | |||||||||    
T  29802780 ttttttatttcatatcttagtgtggtgtttatttgattcttgttgaaagagtag-ttttgatcaagtgcagatccaatcaatgac 29802863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 472 - 544
Target Start/End: Original strand, 34899120 - 34899191
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttttt 544  Q
    ||||||||||||||||||| ||||  |||| |||| || |||||||||||||||| | |||||||||||||||    
T  34899120 ctttgtgtggtgtgtttttaattttccgtcatagtacg-tgtttatttgattcagatggaaagattagttttt 34899191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 452 - 539
Target Start/End: Complemental strand, 15312610 - 15312523
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    ||||| |||||||||| |  |||||||  ||||||||||||||| ||   |||||  |||||||||||||||||| ||||||||||||    
T  15312610 tatttattttgatttttcatctttgtgctgtgtgttttttatttttcaatttagtatggtgtttatttgattcagattgaaagattag 15312523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 4871123 - 4871046
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttc 433  Q
    |||||||||| ||| ||| ||||||||| |||| |||||||||||||||| |||| || | ||| ||||| |||||||    
T  4871123 aattgtttttccttttattctaattgaataagttatttcacatattttctatttttttccgtttgtttttgtgatttc 4871046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 454 - 542
Target Start/End: Original strand, 10599003 - 10599089
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagttt 542  Q
    |||||||||||||| || |||||||  | |||||||| ||||   |||| ||||||||||||| || ||||| ||||||||||||||||    
T  10599003 tttgttttgatttttcgtctttgtgcagcgtgtttttgatttt--gtctcagtgcggtgtttaattcattcatgttgaaagattagttt 10599089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 395 - 535
Target Start/End: Complemental strand, 34335146 - 34335006
Alignment:
Q  395 acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatt 494  Q
    ||||||||||  |||| |||| ||| ||||| ||||||| || ||| || | || ||| |||||||| ||||  |  ||||||| | ||||||||| |||    
T  34335146 acatattttcaattttatttcgtttgtttttgtgatttcatcatctttacatgactctgtttgttttaatttctcatctttgtgcgttgtgtttttcatt 34335047  T
Q  495 tctcgtcttagtgcggtgtttatttgattcaggttgaaaga 535  Q
    |  | ||||||||   |||||||||||||||||||||||||    
T  34335046 ttccatcttagtgtattgtttatttgattcaggttgaaaga 34335006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 501 - 540
Target Start/End: Complemental strand, 45425427 - 45425388
Alignment:
Q  501 cttagtgcggtgtttatttgattcaggttgaaagattagt 540  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  45425427 cttagtgcggtgtttattttattcatgttgaaagattagt 45425388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 445 - 522
Target Start/End: Complemental strand, 8744135 - 8744058
Alignment:
Q  445 acgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgat 522  Q
    |||| ||||||||||||||||||||| |||||||||   ||||||| ||||   || |||||||  ||||||||||||    
T  8744135 acgactctatttgttttgattttccgtctttgtgtgacatgtttttaatttactgttttagtgcaatgtttatttgat 8744058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 538
Target Start/End: Complemental strand, 16575052 - 16574971
Alignment:
Q  457 gttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    ||||||||||||||  ||||||  |||||||||| |||||   | |||||| ||| ||||||||||| |||||||| |||||    
T  16575052 gttttgattttccgtttttgtgcagtgtgtttttaatttcatatattagtgaggtttttatttgatttaggttgaaggatta 16574971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 538
Target Start/End: Complemental strand, 31427098 - 31427065
Alignment:
Q  505 gtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||| |||||||||||||||||||||||||||||    
T  31427098 gtgcagtgtttatttgattcaggttgaaagatta 31427065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 33939144 - 33939108
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca 356  Q
    |||||||||||||  ||||||||||||||||||||||    
T  33939144 gaggggtgatttagggtcaattttgacccaaaaatca 33939108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 536
Target Start/End: Original strand, 40646711 - 40646755
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 536  Q
    ||||| |||||| |||||||||||||||||||||  |||||||||    
T  40646711 atttcccgtcttcgtgcggtgtttatttgattcatattgaaagat 40646755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 361 - 574
Target Start/End: Complemental strand, 13337 - 13125
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    |||||| || ||||||||||||| |||||||||||||| |||||||||||||||  ||| ||||| |||||||||||||||| ||||| ||| |||||||    
T  13337 tttttttttttatcctaattgaataagtgatttcacatcttttctgttttcttttgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttt 13238  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| ||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||  |||||||||||||| || |    
T  13237 tgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgaggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaaatcc 13139  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  13138 gatcaatgacaatg 13125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 125; Significance: 4e-64; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 320 - 570
Target Start/End: Complemental strand, 1228 - 967
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||| ||||||||||||||||||||||         ||||||||| |||||| |||||||||| |||||||||||||||||||| |||||    
T  1228 gaggggtgatttaaggtcaattttgacccaaaaatcacccctgcgaattgtttttccttctaccctaattgaataagtgatttcacatattttcagtttt 1129  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtc---ttagtg 507  Q
    ||||| ||| ||||| ||||||||||||||||  |||| ||| ||||||||||||| ||| ||||||| |||||||||||||||||  |||   ||||||    
T  1128 ctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgatttcccgtctttgtgcggtgtgttttttatttcctgtctaattagtg 1029  T
Q  508 cggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||| |||||||||||||||||||||||||  |||||| || |||||||||||||||||||    
T  1028 cggtgtatatttgattcaggttgaaagattag-ctttgagaaactgcagattcgatcaatgac 967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 1 - 216
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||||| |||||||||||||||| ||||| ||| ||||    
T  1 ttgtttttccttctatcttaattgaataagtgatttcacatattttttgttttcttttgtttatttttgtgatttcgtcgtctctgaacgactctgtttg 100  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| |||| |||||| ||||| | ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||| |    
T  101 ttttgatttcccgtctttgtgcggtgcgtttttgatttcccatcttagtgctgtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcata 199  T
Q  558 ttcgatcaatgacaatg 574  Q
    |  | ||||||||||||    
T  200 tctggtcaatgacaatg 216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 4e-64; HSPs: 54)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 23654276 - 23654491
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | ||| |||| ||||||||||||||||||| |||||| |||| ||| ||||| |||||||||||||||| ||||| ||| ||||    
T  23654276 ttgtttttccttctaccttaactgaataagtgatttcacatattttttgttttatttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttg 23654375  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| |||| |||||    
T  23654376 ttttgatttcccgtctttgtgtggtgtgtttttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgaacaagagcaga 23654474  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||||||||    
T  23654475 tccgatcaatgacaatg 23654491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 362 - 574
Target Start/End: Complemental strand, 31937510 - 31937300
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||||||||||| ||| ||||||||    
T  31937510 tttttcttctatcctaattgaataagtgatttcacatattttctgattt-tttcgtttgtttttgtgatttcgtcgtctctaaacgactctgtttgtttt 31937412  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    || || | | ||||||| ||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| ||    
T  31937411 gagttcctgtctttgtgcggtgtgtttatgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgaacaagtgcagatccg 31937313  T
Q  562 atcaatgacaatg 574  Q
    |||||||||||||    
T  31937312 atcaatgacaatg 31937300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 358 - 558
Target Start/End: Complemental strand, 19402903 - 19402706
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| ||| ||||    
T  19402903 ttgtttttccttgtatcataattgaacaagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttg 19402804  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||  ||||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  19402803 ttttgatttcccgtctttgtacggtgtg--tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaga 19402707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 12481465 - 12481250
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||| | |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| | | ||||    
T  12481465 ttgtttttccttctaccttaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttg 12481366  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| |||  |||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||   ||||| |||| |||||    
T  12481365 ttttgatttcccgtttttgtgcggtgtgtttttgatttcccgtcttagtgcggtgtttatttgatttaggttgaaagatta-actttgaacaagagcaga 12481267  T
Q  558 ttcgatcaatgacaatg 574  Q
    | |||||||||| ||||    
T  12481266 tccgatcaatgaaaatg 12481250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 361 - 570
Target Start/End: Complemental strand, 4921973 - 4921765
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| |||||||| |||||||| |||||||||||||||||||| ||||| |||| ||| ||||| |||||| |||||||||  |||| |||||||||||    
T  4921973 tttttccttctatcttaattgaataagtgatttcacatattttcagttttatttcgtttgtttttgtgattttgtcgtctctgcacgactctatttgttt 4921874  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| ||||||| | ||||||||| ||||| ||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |    
T  4921873 tgatttcccgtctttgtgcgatgtgtttttgatttcccgtcttactgcggtgtttatttgatccaggttgaaagattag-ctttgagcaagtgcagatcc 4921775  T
Q  561 gatcaatgac 570  Q
    ||||||||||    
T  4921774 gatcaatgac 4921765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 358 - 574
Target Start/End: Complemental strand, 6419953 - 6419738
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||| |||||     ||||    
T  6419953 ttgtttttccttctatcctaattgaataagtgatttcacatattttttgttttctttcatttgtttttgtgatttcgtcgtctctgaacgacaacgtttg 6419854  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||| ||| ||||||| ||||||||||||||||| |||||||||||  |||||||||| ||||||||||||||||||  |||||| |||||||||    
T  6419853 ttttgatttcccgtctttgtgcggtgtgttttttatttcccgtcttagtgcaatgtttatttggttcaggttgaaagattag-ctttgagtaagtgcaga 6419755  T
Q  558 ttcgatcaatgacaatg 574  Q
      | ||| |||||||||    
T  6419754 cccaatcgatgacaatg 6419738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 375 - 574
Target Start/End: Original strand, 31705208 - 31705406
Alignment:
Q  375 ctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctt 474  Q
    ||||||||| || | |||||||||||||||| ||||||| | |||  |||| |||||||||||||||| ||||| ||| ||||||||||||||||  |||    
T  31705208 ctaattgaataaataatttcacatattttctattttcttccgtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccatctt 31705307  T
Q  475 tgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  31705308 tgtacggtgtgtttttgatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgaacaagtgcagatccgatcaatgacaatg 31705406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 6296347 - 6296129
Alignment:
Q  356 aattgttttttc-ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||||| ||||| |||||||||| ||||| |||||||||||||||  |||||||| ||| ||||| |||||||||||||||| ||||| | |      
T  6296347 aattgttttttccttctaccctaattgaataagtggtttcacatattttctagtttctttcgtttgtttttgtgatttcgtcgtctctgaacgactttgc 6296248  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| ||| ||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||   ||||||||| |||    
T  6296247 ttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggttaaaagatta-actttgagcaaatgc 6296149  T
Q  555 agattcgatcaatgacaatg 574  Q
    |||| |||||||||||||||    
T  6296148 agatccgatcaatgacaatg 6296129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 356 - 574
Target Start/End: Complemental strand, 6303157 - 6302939
Alignment:
Q  356 aattgttttttc-ttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctat 454  Q
    |||||||||||| ||||| |||||||||| ||||| |||||||||||||||  |||||||| ||| ||||| |||||||||||||||| ||||| | |      
T  6303157 aattgttttttccttctaccctaattgaataagtggtttcacatattttctagtttctttcgtttgtttttgtgatttcgtcgtctctgaacgactttgc 6303058  T
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| ||| ||||||| ||||||||||||||||  ||||||||||| |||||||||||||||||||| ||||||||   ||||||||| |||    
T  6303057 ttgttttgatttcccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggttaaaagatta-actttgagcaaatgc 6302959  T
Q  555 agattcgatcaatgacaatg 574  Q
    |||| |||||||||||||||    
T  6302958 agatccgatcaatgacaatg 6302939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 320 - 574
Target Start/End: Complemental strand, 8693802 - 8693534
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcct---aattgaacaagtgatttcacatattttctgt 407  Q
    |||||||||||||| ||||||||||||||||||||||         ||||||||| ||||||||||   ||||||| |||||||||||||||||||||||    
T  8693802 gaggggtgatttaaggtcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctcctaattgaataagtgatttcacatattttctgt 8693703  T
Q  408 tttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgt---tttttatttctcgtctta 504  Q
    |||||||| ||| ||||| | |||| ||||||||| ||||| |   ||||||||||||| ||| |||||||  || | |   |||||||||  |||||||    
T  8693702 tttctttcgtttgtttttgtcattttgtcgtctctgaacgacttcgtttgttttgatttcccgtctttgtgctgtttttatttttttattttccgtctta 8693603  T
Q  505 gtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||||    
T  8693602 gtgcagtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaaggacaatg 8693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 4393796 - 4394011
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||  ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||| ||||| ||||||| | ||||||  |||| ||| ||||    
T  4393796 ttgttttaccttctatcctaatagaacaagtgatttcacatattttcttttttctttcgtttgtttttgtgatttcatggtctctgcacgattctgtttg 4393895  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || |||||||  |||||||||||||||| | |||||||||||||||||||||| ||||||||||||||||   ||||| ||||||||||    
T  4393896 ttttgatttctcgtctttgtgcagtgtgttttttatttcccatcttagtgcggtgtttatttgactcaggttgaaagatta-actttgatcaagtgcaga 4393994  T
Q  558 ttcgatcaatgacaatg 574  Q
    |  ||||| ||||||||    
T  4393995 tctgatcactgacaatg 4394011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 320 - 523
Target Start/End: Complemental strand, 14783313 - 14783101
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    ||||| |||||||  ||||||||||||||||||||||         ||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  14783313 gagggctgatttagggtcaattttgacccaaaaatcacgcctccgaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtttt 14783214  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||||||| ||||| |||||||||||||||| ||| | ||| ||||||||||||| ||| ||||||| ||||||||||| ||||| | |||| ||||||    
T  14783213 ctttcatttctttttgtgatttcgtcgtctctgaacaactctgtttgttttgatttcccgtctttgtgcggtgtgtttttcatttcccatctttgtgcgg 14783114  T
Q  511 tgtttatttgatt 523  Q
    ||| | |||||||    
T  14783113 tgtgtttttgatt 14783101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 376 - 574
Target Start/End: Complemental strand, 23638195 - 23638000
Alignment:
Q  376 taattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgccttt 475  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| | ||| | |||||||||||||| ||  | ||| ||||||||||||| ||| ||||    
T  23638195 taattgaataagtgatttcacatattttctgttttctttcgtttgtgtttgtaatttcgtcgtctctgaagaactctgtttgttttgatttcccgtcttt 23638096  T
Q  476 gtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||  |||||  ||| ||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| ||| | || ||||||||||    
T  23638095 gtgcagtgtg--tttgatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaaatgctgatccaataaatgacaatg 23638000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 320 - 466
Target Start/End: Complemental strand, 15590221 - 15590066
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15590221 gaggggtgatttagggtcaattttgacccaaaaatcacccctctgaattgttttttcttctatcctaattgaataagtgatttcacatattttctgtttt 15590122  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    ||||| |||  |||| |||||||||||||||| ||||| ||| |||||||||||||    
T  15590121 ctttcgtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 15590066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 362 - 574
Target Start/End: Complemental strand, 35219995 - 35219793
Alignment:
Q  362 tttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgtttt 461  Q
    |||| ||||||||| ||| ||| ||||||| ||||||||||||||||||||||  ||| ||||  ||||||||||||        || ||| ||||||||    
T  35219995 ttttccttctatccgaatcgaataagtgatatcacatattttctgttttcttttgtttgttttg-tgatttcgtcgt--------gactctgtttgtttt 35219905  T
Q  462 gattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcg 561  Q
    ||||| | | |||||||| |||  ||||||||||| |||||||||||||||||||||||||||||||||||| |||||  |||||||||||||| || ||    
T  35219904 gatttcctgtctttgtgtagtgcattttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaaaattag-ctttgagcaagtgcaaatccg 35219806  T
Q  562 atcaatgacaatg 574  Q
    |||||||||||||    
T  35219805 atcaatgacaatg 35219793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 320 - 490
Target Start/End: Complemental strand, 21507950 - 21507771
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||| ||||         ||||||||| ||||||||||| ||||| ||||||||||||||||||| ||||||    
T  21507950 gaggggtgatttagggtcaattttgacccaaacatcacccctccaaattgtttttccttctatcctagttgaataagtgatttcacatattttttgtttt 21507851  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttt 490  Q
    ||||| ||| ||||| |||||| ||||||||||||||| | | ||||||||||||| ||| ||| ||| |||||||||||    
T  21507850 ctttcgtttgtttttgtgattttgtcgtctctaaacgactttgtttgttttgatttcccgtcttagtgcggtgtgttttt 21507771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 385 - 510
Target Start/End: Complemental strand, 29927162 - 29927038
Alignment:
Q  385 aagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgt 484  Q
    ||||||||||||| ||||||||||||||||| ||| ||||| |||||| ||||||||||||||| |||  |||||||||||| ||| ||||||| |||||    
T  29927162 aagtgatttcacaaattttctgttttctttcgtttgtttttgtgattttgtcgtctctaaacgactct-gttgttttgatttcccgtctttgtgcggtgt 29927064  T
Q  485 gttttttatttctcgtcttagtgcgg 510  Q
    |||||||||||| |||||||||||||    
T  29927063 gttttttatttcacgtcttagtgcgg 29927038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 367 - 569
Target Start/End: Original strand, 2488173 - 2488373
Alignment:
Q  367 cttctatcctaattgaacaagtgatttc-acatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgatt 465  Q
    ||||||||||||| ||| |||||||||| || |||||||  ||||||||| ||| ||||  | ||||||| ||||||  |||| | | ||||||||||||    
T  2488173 cttctatcctaatcgaataagtgatttccacgtattttcatttttctttcgtttgttttg-taatttcgttgtctctgcacgactatgtttgttttgatt 2488271  T
Q  466 ttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatca 565  Q
    ||||| |||||||||||||| |||||||||   ||||||||||||||||||| | ||||||||||||||||||   |||||||||||| |||| ||||||    
T  2488272 ttccgtctttgtgtggtgtg-tttttattttatgtcttagtgcggtgtttatcttattcaggttgaaagatta-actttgagcaagtgtagatccgatca 2488369  T
Q  566 atga 569  Q
    ||||    
T  2488370 atga 2488373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 450 - 570
Target Start/End: Complemental strand, 13871623 - 13871504
Alignment:
Q  450 tctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagca 549  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||  ||||||||||| ||||||||||||||||||||| |||||| |  ||||||||    
T  13871623 tctatttgttttgattttccgtctttgtgcggtgtgttttttattttccgtcttagtgcagtgtttatttgattcaggttggaagatttg-ctttgagca 13871525  T
Q  550 agtgcagattcgatcaatgac 570  Q
    |||||| ||  ||||||||||    
T  13871524 agtgcaaatctgatcaatgac 13871504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 484 - 574
Target Start/End: Complemental strand, 2304807 - 2304718
Alignment:
Q  484 tgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  2304807 tgttttttatttcccgtcttagtgcagtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 2304718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 416 - 539
Target Start/End: Original strand, 29284836 - 29284960
Alignment:
Q  416 atttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttt-ttatttctcgtcttagtgcggtgtt 514  Q
    |||| ||||| |||||||||||||| |  |||| | | ||||||||||||||  | ||||||| | |||||||| |||||||||||||||||||||||||    
T  29284836 atttgtttttgtgatttcgtcgtctttgcacgactttgtttgttttgattttttgtctttgtgcgatgtgtttttttatttctcgtcttagtgcggtgtt 29284935  T
Q  515 tatttgattcaggttgaaagattag 539  Q
    ||||||||||| |||||||||||||    
T  29284936 tatttgattcaagttgaaagattag 29284960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 455 - 574
Target Start/End: Complemental strand, 1106865 - 1106747
Alignment:
Q  455 ttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgc 554  Q
    |||||||||||| | | ||||||| ||||| ||||| | ||| ||||||||| || |||||||||||||||||||||||||||||  |||||||||||||    
T  1106865 ttgttttgatttcctgtctttgtgcggtgtatttttgacttcccgtcttagtacgatgtttatttgattcaggttgaaagattag-ctttgagcaagtgc 1106767  T
Q  555 agattcgatcaatgacaatg 574  Q
    ||||  ||||||||||||||    
T  1106766 agatctgatcaatgacaatg 1106747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 358 - 461
Target Start/End: Complemental strand, 2304905 - 2304802
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||  ||||| || |||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| || || ||||||||    
T  2304905 ttgttttcccttctgtcataattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaatgactctatttg 2304806  T
Q  458 tttt 461  Q
    ||||    
T  2304805 tttt 2304802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 472 - 574
Target Start/End: Complemental strand, 14783123 - 14783022
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgaca 571  Q
    ||||||| ||||||||||| ||||| |||||||||| ||||| ||||||||| || |||||||||||| ||||||||||||||||||  |||||||||||    
T  14783123 ctttgtgcggtgtgtttttgatttcccgtcttagtgtggtgtatatttgatttagattgaaagattag-ttttgagcaagtgcagatgtgatcaatgaca 14783025  T
Q  572 atg 574  Q
    |||    
T  14783024 atg 14783022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 487 - 575
Target Start/End: Complemental strand, 15590074 - 15589987
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatgg 575  Q
    |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||| || ||||||||||||||||    
T  15590074 ttttgatttcccgtcttaatgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtgcaaatccgatcaatgacaatgg 15589987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 458 - 537
Target Start/End: Original strand, 15175936 - 15176015
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatt 537  Q
    |||||||||  || ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  15175936 ttttgatttcacgtctttgtgcggtgtgttttttatttctcgtgttagtgcggtgtttatttgattcaggttaaaagatt 15176015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 390 - 569
Target Start/End: Complemental strand, 31801293 - 31801116
Alignment:
Q  390 atttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgtttt 489  Q
    ||||||||||||||| |||||||||  ||| || || ||||||||||||||   | ||| | ||||| |||||||||| ||  |||| | ||||||||||    
T  31801293 atttcacatattttcagttttcttttgtttgttgttgtgatttcgtcgtctagca-cgactttatttattttgatttttcgtatttgggcggtgtgtttt 31801195  T
Q  490 ttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||| ||||||||  |||||||||||||| |||  ||| ||||||||| |||||| |||||||| |||| ||||||||    
T  31801194 ttatttatcgtcttaaagcggtgtttatttgcttcgagtttaaagattag-ttttgatcaagtgcaaattcaatcaatga 31801116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 15470232 - 15470122
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    |||||||||  || ||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||||| ||||||| | |||||| ||| | ||||    
T  15470232 ttttgatttcacgtctttgtgcggtgagtttttaatttctcgtgttagtgcggtgtttatttgattcaggttaaaagattcg-ttttgatcaactacaga 15470134  T
Q  558 ttcgatcaatga 569  Q
    ||| ||||||||    
T  15470133 ttcaatcaatga 15470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 407 - 569
Target Start/End: Original strand, 27135188 - 27135347
Alignment:
Q  407 ttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagt 506  Q
    |||| |||| ||| ||||| ||||||||||||||||| |||| |||||||| |||| |||| || ||||||| ||||| |||||| |||  |||||||||    
T  27135188 ttttatttcctttgtttttgtgatttcgtcgtctctacacgactctatttg-tttggtttttcgtctttgtgcggtgtattttttgttttacgtcttagt 27135286  T
Q  507 gcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||| ||||||||||||| |  ||||| ||||| | ||||||||| || |||||| ||||||||    
T  27135287 gcgatgtttatttgattta-attgaacgatta-tctttgagcaaatgtagattcaatcaatga 27135347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 23101374 - 23101288
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||| ||||||| ||||||||||||||||||||||||||   |||||||||||||| || |||||||||||||||    
T  23101374 ttttgatttcccgtctttgtgcggtatttatttgattcaggttgaaagatta-actttgagcaagtgcaaatccgatcaatgacaatg 23101288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 480 - 570
Target Start/End: Complemental strand, 1419070 - 1418981
Alignment:
Q  480 ggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||||| ||||||| | | |||||||||||||||| || ||||||||||||  ||| |||||||| ||||||||||||||||    
T  1419070 ggtgtgttttttattcctcgtctcaatacggtgtttatttgatttagattgaaagattag-atttaagcaagtgtagattcgatcaatgac 1418981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 487 - 574
Target Start/End: Complemental strand, 21507803 - 21507717
Alignment:
Q  487 tttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||| ||||| |||||||||||||||| | ||||||||||||||||||||||   ||||||||||||  ||| |||||||||||||||    
T  21507803 ttttgatttcccgtcttagtgcggtgtgtttttgattcaggttgaaagatta-actttgagcaagtgtcgatccgatcaatgacaatg 21507717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 356 - 410
Target Start/End: Complemental strand, 31937628 - 31937574
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  31937628 aattgttttttcatctatcctaattgaataagtgatttaacatattttctgtttt 31937574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 498 - 570
Target Start/End: Complemental strand, 12654258 - 12654187
Alignment:
Q  498 cgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    |||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||||| ||||  ||||||||||    
T  12654258 cgtcttagtgtggtgtttatttgatttaggttgaaagactag-ttttgagcaagtgtagatctgatcaatgac 12654187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 16329067 - 16328952
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||| ||||| | ||||||| || |||| ||| |||| | | |||||| | |||||||||||||| ||||||||||||||| ||||||| |||||    
T  16329067 tttgttttgtttttctgtctttgtgcggcgtgtctttgattttttgccttagtcctgtgtttatttgatttaggttgaaagattag-ttttgagtaagtg 16328969  T
Q  554 cagattcgatcaatgac 570  Q
    || |||  |||||||||    
T  16328968 caaatttaatcaatgac 16328952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 499 - 570
Target Start/End: Original strand, 8508295 - 8508365
Alignment:
Q  499 gtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||| |||||||||||||||||| || ||||||||| |||||| ||||||||||||  |||||||||    
T  8508295 gtcttagtgtggtgtttatttgattcagattaaaagattag-ttttgatcaagtgcagattgaatcaatgac 8508365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 569
Target Start/End: Complemental strand, 16361036 - 16360922
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||| ||| ||| |||||||||| |||| ||| |||| | | |||||| | |||||||||||||| ||||||||| ||||| ||||||| |||||    
T  16361036 tttgttttgttttcccgtctttgtgtggcgtgtctttgattttttgccttagtcctgtgtttatttgatttaggttgaaaaattag-ttttgagtaagtg 16360938  T
Q  554 cagattcgatcaatga 569  Q
    || |||  ||||||||    
T  16360937 caaatttaatcaatga 16360922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 454 - 525
Target Start/End: Complemental strand, 18248989 - 18248918
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattca 525  Q
    ||||||||||||||||   ||||||| | || |||||||||| ||||||||||||| |||||||||||||||    
T  18248989 tttgttttgattttccatgtttgtgtagcgtattttttatttttcgtcttagtgcgttgtttatttgattca 18248918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 1915146 - 1915100
Alignment:
Q  493 tttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  1915146 tttcccgtcttagtacggtgtttatttgattcaggttgaaagattag 1915100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 373 - 427
Target Start/End: Original strand, 15057722 - 15057776
Alignment:
Q  373 tcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttat 427  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| | |||||||    
T  15057722 tcctaattgaatacgtgatttcacatattttctgttttctttcatctgtttttat 15057776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 508 - 574
Target Start/End: Complemental strand, 29920862 - 29920797
Alignment:
Q  508 cggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
    |||||||||||||||| |||||||||||||||  |||||| |||||  |||||||||||||||||||    
T  29920862 cggtgtttatttgatttaggttgaaagattag-ctttgagtaagtgttgattcgatcaatgacaatg 29920797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 500 - 569
Target Start/End: Complemental strand, 3610298 - 3610230
Alignment:
Q  500 tcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||||||||||||||| |||||||||||||||  |||| ||| || ||||||||||||| ||||||||    
T  3610298 tcttagtgcggtgtttatctgattcaggttgaaaagttagctttgga-caagtgcagattcaatcaatga 3610230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 569
Target Start/End: Complemental strand, 5527625 - 5527510
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgtttttt-atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagt 552  Q
    |||||||||||||  || ||||||| ||||||||| || |||| || |||||||||| || |||||| ||||||||||||| |||||  ||||| |||||    
T  5527625 tttgttttgatttctcgtctttgtgcggtgtgtttattgatttttcatcttagtgcgatgattatttaattcaggttgaaatattag-ctttgaacaagt 5527527  T
Q  553 gcagattcgatcaatga 569  Q
    | |||| | ||||||||    
T  5527526 gtagatccaatcaatga 5527510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 454 - 570
Target Start/End: Complemental strand, 16338302 - 16338187
Alignment:
Q  454 tttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtg 553  Q
    ||||||||| ||| ||| ||||||| ||  ||| ||| |||| | | |||||| | |||||||||||||| ||||||||||||||| ||||||| | |||    
T  16338302 tttgttttgttttcccgtctttgtgcggcatgtctttgattttttgccttagtcctgtgtttatttgatttaggttgaaagattag-ttttgagtaggtg 16338204  T
Q  554 cagattcgatcaatgac 570  Q
    || |||| |||||||||    
T  16338203 caaattcaatcaatgac 16338187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 535
Target Start/End: Original strand, 12156301 - 12156339
Alignment:
Q  497 tcgtcttagtgcggtgtttatttgattcaggttgaaaga 535  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  12156301 tcgtcttagtgcggtatttatttgattcaggttgaaaga 12156339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 570
Target Start/End: Original strand, 28943415 - 28943507
Alignment:
Q  476 gtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||||||||||| ||||||||||||| || |||| ||||||| |||| ||| ||||| |||  ||||| |||||||| |||| |||||||||    
T  28943415 gtgtggtgtgtttttgatttctcgtcttaatgtggtgcttatttgtttcaagttaaaaga-tag-ctttgaacaagtgcaaattcaatcaatgac 28943507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 539
Target Start/End: Original strand, 35038852 - 35038904
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||| |||||    
T  35038852 ttttttatttttcgtcttagt-cggtgtttatttcattcaggttgaaatattag 35038904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 486 - 538
Target Start/End: Original strand, 7076696 - 7076748
Alignment:
Q  486 ttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagatta 538  Q
    |||||||| |||||||||||||| ||||||||||| | || ||||||||||||    
T  7076696 ttttttatatctcgtcttagtgcagtgtttatttgttccaagttgaaagatta 7076748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 569
Target Start/End: Complemental strand, 16339801 - 16339734
Alignment:
Q  501 cttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||| | ||||||||||||||  |||||||||||||| ||||||| ||||||| |||| ||||||||    
T  16339801 cttagtcccgtgtttatttgattttggttgaaagattag-ttttgagtaagtgcaaattcaatcaatga 16339734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 569
Target Start/End: Complemental strand, 8978810 - 8978625
Alignment:
Q  383 acaagtgattt-cacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtgg 481  Q
    ||||||||||| ||||||| ||   |||| ||||| |||||||| ||||||||||||||   | ||| | | ||| ||||  |||| || ||||||| |     
T  8978810 acaagtgattttcacatatctttaattttatttcaattatttttgtgatttcgtcgtctagca-cgactttgtttattttagtttttcgtctttgtgcga 8978712  T
Q  482 tgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||||||||||||  | ||||| | |||  ||||||||||  | ||||||||||||| |||||| |||||||| |||| ||||||||    
T  8978711 tgtgttttttattttccatcttaatacggcatttatttgatcaaagttgaaagattag-ttttgatcaagtgcatattcaatcaatga 8978625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 543
Target Start/End: Original strand, 3358921 - 3358982
Alignment:
Q  484 tgttttttatttctcgtcttagtgcgg--tgtttatttgattcaggttgaaagattagtttt 543  Q
    ||||||||||||||| |||||||   |  ||||||||||||||||||||||||| |||||||    
T  3358921 tgttttttatttctcatcttagtatagagtgtttatttgattcaggttgaaagagtagtttt 3358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 539
Target Start/End: Original strand, 7870298 - 7870364
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||||||||||||||||||||  | ||||| |||| ||||||| ||||||| ||| ||| |||||    
T  7870298 tttgtgtggtgtgttttttattttccatcttaatgcgatgtttatatgattcacgttaaaatattag 7870364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 473 - 539
Target Start/End: Complemental strand, 20028674 - 20028608
Alignment:
Q  473 tttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattag 539  Q
    |||||| ||||||||||||||||  ||||||||||  ||||||| || | ||||||||||| |||||    
T  20028674 tttgtgcggtgtgttttttattttccgtcttagtgttgtgtttactttaatcaggttgaaatattag 20028608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 536
Target Start/End: Original strand, 8497004 - 8497048
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagat 536  Q
    |||||||||||| |||||||||| ||||||||||  |||||||||    
T  8497004 atttctcgtcttcgtgcggtgttcatttgattcatattgaaagat 8497048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 320 - 574
Target Start/End: Original strand, 74143 - 74405
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatca---------attgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||| |||||||| | |||||||||||||||||||||         ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  74143 gaggagtgatttagaatcaattttgacccaaaaatcacccatccgaattgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 74242  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| ||||||  |||||| | ||||| | | ||||||||||||| ||| ||||||| ||||||||||| ||||| | ||||||| |||    
T  74243 ctttcgtttgtttttgtgattttttcgtctttgaacgactttgtttgttttgatttcccgtctttgtgcggtgtgtttttaatttcacatcttagtacgg 74342  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatg 574  Q
     ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  74343 agtttatttgattcaggttgaaagattag-ctttgagcaagtgcagatccgatcaatgacaatg 74405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 320 - 575
Target Start/End: Original strand, 6116 - 6379
Alignment:
Q  320 gaggggtgatttaaagtcaattttgacccaaaaatcaa---------ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgtttt 410  Q
    |||||||||||||  ||||||||||||||||||||||          |||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  6116 gaggggtgatttagggtcaattttgacccaaaaatcacccctccgagttgtttttccttctatcctaattgaataagtgatttcacatattttctgtttt 6215  T
Q  411 ctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcgg 510  Q
    ||||| ||| ||||| |||||||||||||||| ||||| | | ||||||||||||| ||| |||| || | ||||||||||||||  ||||||||| |||    
T  6216 ctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgatttcccgtctttatgcgatgtgttttttattttccgtcttagtacgg 6315  T
Q  511 tgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgacaatgg 575  Q
    ||||||||||||  ||||||||||||||   ||||  ||||||||||||||||||||||||||||    
T  6316 tgtttatttgatctaggttgaaagatta-actttgcacaagtgcagattcgatcaatgacaatgg 6379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 116; Significance: 1e-58; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 367 - 574
Target Start/End: Original strand, 1609 - 1815
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    |||||| | |||||||| ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||| || || | | ||||||| |||||    
T  1609 cttctaccataattgaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctgaaagactttgtttgtttcgattt 1708  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  1709 cccgtcttagtgcggtgtgttttttatttcccgtcttagtgcggtgtttatttgattcaggttgaaagattag-ctttgagcaagtacagatccgatcaa 1807  T
Q  567 tgacaatg 574  Q
    ||||||||    
T  1808 tgacaatg 1815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 358 - 574
Target Start/End: Original strand, 35108 - 35325
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatat--tttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||| ||| |||||  |||||| || ||||||||| ||||| ||    
T  35108 ttgtttttccttctatcctaattgaataagtgatttcacatatattttctgttttctttcgtttgtttttgcgatttcatcatctctaaacaaatctgtt 35207  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    ||||||||||| ||  ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||    
T  35208 tgttttgatttcccatctttgtgcggtgtattttttatttctcgtcttagtgcggtgtttatttgatttaggttgaaatattag-ctttgagcaagtgca 35306  T
Q  556 gattcgatcaatgacaatg 574  Q
     || ||| || ||||||||    
T  35307 aatccgaccattgacaatg 35325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 356 - 570
Target Start/End: Complemental strand, 7221 - 7008
Alignment:
Q  356 aattgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatt 455  Q
    |||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||| ||||||| ||  ||    
T  7221 aattgtttttccttttatcctaattgaataagtgatttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctataaacgactcggtt 7122  T
Q  456 tgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgca 555  Q
    |||||||||||  || ||||||| ||||||||||| ||||| ||||| ||||| |||||||||| |||| |||| |||||||||  || |||||||||||    
T  7121 tgttttgatttctcgtctttgtgcggtgtgtttttgatttcccgtctaagtgcagtgtttatttaattcgggttaaaagattag-cttggagcaagtgca 7023  T
Q  556 gattcgatcaatgac 570  Q
    ||| |||||||||||    
T  7022 gatccgatcaatgac 7008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 108; Significance: 6e-54; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 367 - 574
Target Start/End: Complemental strand, 4153 - 3947
Alignment:
Q  367 cttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttttgattt 466  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||| | ||||| | | |||||||||||||    
T  4153 cttctatcctaattaaataagtgatttcacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgattt 4054  T
Q  467 tccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaa 566  Q
     ||| ||||||| ||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||| |||||  |||||||||||||||||  ||||||    
T  4053 cccgtctttgtgcggtatgtttttgatttcccgtcttagtgcggtgtttatttaattcaggttgaaatattag-ctttgagcaagtgcagatctgatcaa 3955  T
Q  567 tgacaatg 574  Q
    ||| ||||    
T  3954 tgaaaatg 3947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 105; Significance: 4e-52; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 362 - 570
Target Start/End: Complemental strand, 404350 - 404139
Alignment:
Q  362 tttttctt-ctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| |||||||||||||||||| ||| ||| |||||||    
T  404350 tttttcttgctatcctaattgaataagtgatttcacatattttctgttttcttccgtttgtttttgtgatttcgtcgtctctaatcgactctgtttgttt 404251  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtc----ttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcag 556  Q
    |||||| ||| ||||||| ||||||||||||||||   |||    |||||| ||||||||||||||||||||||||||| |||  |||||||| ||||||    
T  404250 tgatttcccgtctttgtgcggtgtgttttttattttcagtcttaattagtgtggtgtttatttgattcaggttgaaaga-tag-ctttgagcatgtgcag 404153  T
Q  557 attcgatcaatgac 570  Q
    ||||||||||||||    
T  404152 attcgatcaatgac 404139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 103; Significance: 6e-51; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 361 - 574
Target Start/End: Original strand, 2931 - 3141
Alignment:
Q  361 ttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttgttt 460  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||| |||||| ||||||| | || || ||| |||||||    
T  2931 tttttccttctatcctaattgaataagtgatttcacatattttctgtttcctttcgtttgtttttgtgattttgtcgtctatgaatgactctgtttgttt 3030  T
Q  461 tgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattc 560  Q
    |||||| ||| ||||||| | ||||  ||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||| |    
T  3031 tgatttcccgtctttgtgcgatgtg--tttgatttcccgttttagtacggtgtttatttgattcaggttgaaagattag-ctttgaacaagtgcagatcc 3127  T
Q  561 gatcaatgacaatg 574  Q
    ||||||||||||||    
T  3128 gatcaatgacaatg 3141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 78; Significance: 5e-36; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 358 - 534
Target Start/End: Complemental strand, 2512 - 2339
Alignment:
Q  358 ttgttttttcttctatcctaattgaacaagtgatttcacatattttctgttttctttcatttatttttatgatttcgtcgtctctaaacgaatctatttg 457  Q
    |||||||| |||||||| |||| ||| ||||||||||||||||||||||||||||||| |||  |||| ||||||| | |||| | ||||| |||||||     
T  2512 ttgtttttccttctatcataatcgaataagtgatttcacatattttctgttttctttcgttt-gttttgtgatttctttgtctatgaacgactctattta 2414  T
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaag 534  Q
    ||||||||| ||| || |||| ||||||   || ||||| |||||||||||||||||||||||||||||||||||||    
T  2413 ttttgatttcccgtctatgtgcggtgtg--attgatttcccgtcttagtgcggtgtttatttgattcaggttgaaag 2339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 566
Target Start/End: Complemental strand, 22627 - 22514
Alignment:
Q  452 tatttgttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaag 551  Q
    ||||| ||||||||| ||| ||||||||| ||||||||| ||||||  ||||||||| |||| |||||||||| ||||| |||||||| |||||| ||||    
T  22627 tatttattttgatttcccgtctttgtgtgttgtgtttttaatttctgttcttagtgcagtgtgtatttgattctggttgtaagattag-ttttgatcaag 22529  T
Q  552 tgcagattcgatcaa 566  Q
    ||||||||| |||||    
T  22528 tgcagattcaatcaa 22514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 763 - 666
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||   |||||| ||| | ||||||| |||||||||    
T  763 ctttgtgcggtgagttttttctttctcgtcttagtgcggtgtttatttgattcatgttaaaagatt-ccttttgatcaactacagattcaatcaatgac 666  T

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Target: scaffold0580; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 472 - 570
Target Start/End: Complemental strand, 8502 - 8405
Alignment:
Q  472 ctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatgac 570  Q
    ||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||   |||||| ||| | ||||||| |||||||||    
T  8502 ctttgtgcggtgagttttttctttctcgtcttagtgcggtgtttatttgattcatgttaaaagatt-ccttttgatcaactacagattcaatcaatgac 8405  T

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Target: scaffold0886 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 3736 - 3626
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||  | |||||||  |||||||||| ||||  ||| |||||| ||||| ||||||||||||||||||| ||||| |||||| ||||| ||||    
T  3736 ttttgattttttgtctttgtgcagtgtgtttttgatttaacgttttagtgtggtgtctatttgattcaggttgaaatattag-ttttgatcaagtacaga 3638  T
Q  558 ttcgatcaatga 569  Q
    ||| ||||||||    
T  3637 ttcaatcaatga 3626  T

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Target: scaffold0238 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 458 - 569
Target Start/End: Complemental strand, 15675 - 15565
Alignment:
Q  458 ttttgattttccgcctttgtgtggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcaga 557  Q
    ||||||||||| | ||||||| ||||||||||| ||||| ||| |||  ||||| | ||||||||||||||||||| ||||| |||||| ||||| ||||    
T  15675 ttttgattttctgtctttgtgcggtgtgtttttaatttcacgttttaacgcggtatgtatttgattcaggttgaaatattag-ttttgatcaagtacaga 15577  T
Q  558 ttcgatcaatga 569  Q
    ||| | ||||||    
T  15576 ttcaaccaatga 15565  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 480 - 569
Target Start/End: Complemental strand, 202024 - 201936
Alignment:
Q  480 ggtgtgttttttatttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    ||||||||||| ||||| |||||||||  | ||||||||||||||||||||||| |||||  ||||| |||||| | |||| ||||||||    
T  202024 ggtgtgtttttaatttcccgtcttagtatgatgtttatttgattcaggttgaaatattag-ctttgaacaagtgaaaattcaatcaatga 201936  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 569
Target Start/End: Original strand, 35841 - 35907
Alignment:
Q  502 ttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaatga 569  Q
    |||||| ||||| ||||||||||||||||||| ||||| |||||| ||||| ||||||| ||||||||    
T  35841 ttagtgtggtgtctatttgattcaggttgaaatattag-ttttgatcaagtacagattcaatcaatga 35907  T

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Target: scaffold0542 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 492 - 567
Target Start/End: Original strand, 3942 - 4016
Alignment:
Q  492 atttctcgtcttagtgcggtgtttatttgattcaggttgaaagattagtttttgagcaagtgcagattcgatcaat 567  Q
    ||||||||||||| || |||||||||||||||||  || |||||||| | ||||| ||||||||||| | ||||||    
T  3942 atttctcgtcttattgtggtgtttatttgattcaaattaaaagatta-tctttgatcaagtgcagatccaatcaat 4016  T

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