View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4163_low_42 (Length: 223)
Name: NF4163_low_42
Description: NF4163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4163_low_42 |
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Alignment Details
Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 40556681 - 40556840
Alignment:
| Q |
19 |
ggtactgggaataatgttataacaccttctaaagaaggagagattggatttgttcaatgttgtccaagacttagaggnnnnnnntttgaagattggcaag |
118 |
Q |
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| T |
40556681 |
ggtactgggaataatgttataacaccttctaaagaaggagagattggatttgttcaatgttgtccaagacttagaggaaaaaaatttgaagattggcaag |
40556780 |
T |
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| Q |
119 |
ccaaaagaattgtcggtagttataatattcgttctaaagatgtttcaaaatataattctc |
178 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
40556781 |
ccaaaagaattgtcggtagttattatattcgttctaaagatgtttcaaaatataattctc |
40556840 |
T |
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