View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4163_low_49 (Length: 208)
Name: NF4163_low_49
Description: NF4163
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4163_low_49 |
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Alignment Details
Target: chr8 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 39902421 - 39902624
Alignment:
| Q |
1 |
aaactacaactttcccacaggttcacatacaccacatgctacactttatctgagacaataaatttgcaacactaaagaataatttccaagtgtcgattga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
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| T |
39902421 |
aaactacaactttcccacaggttcacatacaccacatgctacactttatctgagacatttaatttgcaacactaaagaataatttccaagtgtcgattga |
39902520 |
T |
|
| Q |
101 |
attatggaaagtcaaacatgatgccaagcattttcacaataatccccacaacgaatgcaattatgtggacataggttttcattttaattggttttcttct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39902521 |
attatggaaagtcaaacatgatgccaagcattttcacaataatccccacaacgaatgcaattatgtggacataggttttcattttaattggttttcttct |
39902620 |
T |
|
| Q |
201 |
cact |
204 |
Q |
| |
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|||| |
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| T |
39902621 |
cact |
39902624 |
T |
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