View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4164_low_5 (Length: 436)
Name: NF4164_low_5
Description: NF4164
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4164_low_5 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 415; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 1 - 436
Target Start/End: Complemental strand, 28268361 - 28267926
Alignment:
| Q |
1 |
attcacaaattcaaatttggtgtgttgtgttggtgtcatcnnnnnnnccttctgaggaaaccccatacaacttggttatgtagactttctaatttctatt |
100 |
Q |
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| T |
28268361 |
attcacaaattcaaatttggtgtgttgtgttggtgtcatctttttttccttctgaggaaaccccatacaacttggttatgtagactttctaatttctatt |
28268262 |
T |
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| Q |
101 |
agttcaatgaatgaaaacaatatgaaacaggttcaattatgaatttgttaaatttactagcataccaaaaaccttggttgtcagctttactggcctcatt |
200 |
Q |
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| T |
28268261 |
agttcaatgaatgaaaacaatatgaaacaggttcaattatgaatttgttaaatttactagcataccaaaaaccttggttgtcagctttactggcctcatt |
28268162 |
T |
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| Q |
201 |
tcttctccaaacctgtgtacattcaataagaaatatatttttggatattgacttggagcattatagtacaaagtcatataatgaatatggaggtggaaaa |
300 |
Q |
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| T |
28268161 |
tcttctccaaacctgtgtacattcaataagaaatatatttttggatattgacttggagcattatagtacaaagtcatataatgaatatggaggtggaaaa |
28268062 |
T |
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| Q |
301 |
ttaccttttgatcccttggtcaggaaccaggagccatttagctgcaatagcaagtatattgcatgaaatgtttcccatggttgtttataggttattttaa |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28268061 |
ttaccttttgatcccttggtcaggaaccaggagccatttagctgcaatagcaagtatattgcatgaaatgtttcccatggttgtttataggttattttaa |
28267962 |
T |
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| Q |
401 |
ctcttgtgacaacatcaagtgaaaaagaaaatacct |
436 |
Q |
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| T |
28267961 |
ctcttgtgacaacatcaagtgaaaaagaaaatacct |
28267926 |
T |
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