View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4166_low_5 (Length: 718)

Name: NF4166_low_5
Description: NF4166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4166_low_5
NF4166_low_5
[»] chr1 (37 HSPs)
chr1 (19-330)||(32798996-32799307)
chr1 (341-487)||(32797516-32797662)
chr1 (367-487)||(24851817-24851937)
chr1 (373-487)||(9781969-9782083)
chr1 (367-487)||(32380731-32380851)
chr1 (373-487)||(29862125-29862239)
chr1 (367-484)||(29168275-29168392)
chr1 (367-487)||(9528517-9528637)
chr1 (367-487)||(10822719-10822839)
chr1 (373-487)||(34096231-34096345)
chr1 (367-461)||(15417920-15418014)
chr1 (367-487)||(14167394-14167514)
chr1 (367-487)||(37922539-37922659)
chr1 (367-487)||(3707945-3708069)
chr1 (367-483)||(34432089-34432204)
chr1 (374-469)||(24589782-24589877)
chr1 (367-466)||(33040725-33040824)
chr1 (367-487)||(28948340-28948454)
chr1 (372-487)||(36551730-36551845)
chr1 (372-487)||(28658539-28658648)
chr1 (367-472)||(37346489-37346588)
chr1 (367-472)||(43190132-43190231)
chr1 (367-472)||(3427732-3427831)
chr1 (367-472)||(5985061-5985160)
chr1 (367-472)||(13012529-13012628)
chr1 (404-472)||(31652979-31653047)
chr1 (367-472)||(25257491-25257588)
chr1 (372-439)||(38218737-38218804)
chr1 (367-472)||(14334644-14334743)
chr1 (390-449)||(47656062-47656121)
chr1 (367-487)||(8133043-8133153)
chr1 (367-469)||(30324597-30324693)
chr1 (367-472)||(6915996-6916091)
chr1 (367-472)||(38331328-38331423)
chr1 (367-472)||(52894835-52894930)
chr1 (367-396)||(36363199-36363228)
chr1 (367-396)||(37104592-37104621)
[»] chr7 (46 HSPs)
chr7 (19-364)||(9600501-9600846)
chr7 (19-364)||(9828072-9828417)
chr7 (367-487)||(11058758-11058878)
chr7 (367-487)||(36757663-36757783)
chr7 (367-487)||(36767187-36767307)
chr7 (367-487)||(44270064-44270184)
chr7 (367-487)||(554563-554683)
chr7 (367-483)||(35136355-35136471)
chr7 (367-484)||(36763443-36763560)
chr7 (372-487)||(21180162-21180277)
chr7 (367-487)||(23078760-23078880)
chr7 (367-487)||(9249962-9250082)
chr7 (367-487)||(9283512-9283632)
chr7 (367-471)||(19820649-19820753)
chr7 (367-487)||(25969851-25969971)
chr7 (163-364)||(25480656-25480857)
chr7 (367-484)||(36413694-36413811)
chr7 (367-487)||(24956569-24956689)
chr7 (367-487)||(35160210-35160330)
chr7 (367-483)||(44958988-44959104)
chr7 (372-487)||(15878080-15878195)
chr7 (373-482)||(26973388-26973497)
chr7 (372-487)||(21409712-21409826)
chr7 (372-487)||(48153867-48153981)
chr7 (390-487)||(38065014-38065111)
chr7 (372-472)||(47237886-47237982)
chr7 (417-487)||(47719856-47719926)
chr7 (396-487)||(1399949-1400039)
chr7 (396-487)||(33454414-33454505)
chr7 (414-473)||(40053627-40053686)
chr7 (367-472)||(16563887-16563986)
chr7 (367-472)||(16601676-16601775)
chr7 (367-472)||(39521450-39521549)
chr7 (367-437)||(47719762-47719832)
chr7 (405-472)||(26773257-26773324)
chr7 (367-472)||(4292043-4292142)
chr7 (367-472)||(8029184-8029283)
chr7 (367-472)||(19510991-19511090)
chr7 (404-487)||(23969840-23969919)
chr7 (367-472)||(27397251-27397350)
chr7 (418-487)||(36661336-36661405)
chr7 (408-472)||(1042747-1042811)
chr7 (367-472)||(40096548-40096643)
chr7 (367-396)||(16851256-16851285)
chr7 (367-396)||(26843706-26843735)
chr7 (367-396)||(48163873-48163902)
[»] chr4 (38 HSPs)
chr4 (367-487)||(7952784-7952904)
chr4 (367-487)||(30683333-30683453)
chr4 (367-487)||(24784719-24784839)
chr4 (367-487)||(24823427-24823547)
chr4 (367-487)||(52721701-52721821)
chr4 (372-487)||(31945905-31946020)
chr4 (373-487)||(1177303-1177417)
chr4 (367-487)||(47607426-47607546)
chr4 (367-487)||(40694395-40694515)
chr4 (372-484)||(51675116-51675228)
chr4 (367-487)||(39958035-39958155)
chr4 (373-483)||(36511609-36511719)
chr4 (367-484)||(42630129-42630246)
chr4 (372-487)||(3108961-3109076)
chr4 (372-487)||(14614829-14614937)
chr4 (372-481)||(2586668-2586777)
chr4 (372-472)||(44521702-44521802)
chr4 (372-487)||(24793387-24793502)
chr4 (372-481)||(17892601-17892710)
chr4 (391-487)||(55900823-55900919)
chr4 (367-472)||(5325150-5325249)
chr4 (367-472)||(14795895-14795994)
chr4 (367-469)||(51859138-51859240)
chr4 (372-472)||(43509574-43509668)
chr4 (372-483)||(258751-258858)
chr4 (367-472)||(52573073-52573172)
chr4 (367-472)||(5835316-5835415)
chr4 (304-366)||(10358767-10358829)
chr4 (372-487)||(36944016-36944137)
chr4 (367-472)||(41146491-41146590)
chr4 (367-445)||(46431612-46431690)
chr4 (367-430)||(10258432-10258495)
chr4 (420-487)||(22492895-22492962)
chr4 (418-472)||(49470638-49470692)
chr4 (367-472)||(3402709-3402804)
chr4 (367-472)||(8063229-8063324)
chr4 (372-472)||(28377385-28377479)
chr4 (420-483)||(27982158-27982221)
[»] chr3 (51 HSPs)
chr3 (367-487)||(25322168-25322288)
chr3 (367-487)||(52684674-52684794)
chr3 (372-487)||(25701110-25701225)
chr3 (367-484)||(19878754-19878871)
chr3 (367-480)||(47750584-47750697)
chr3 (367-487)||(21006014-21006134)
chr3 (373-487)||(13748177-13748291)
chr3 (372-462)||(41741823-41741913)
chr3 (367-487)||(29916117-29916238)
chr3 (367-487)||(29965270-29965391)
chr3 (372-483)||(212845-212956)
chr3 (367-474)||(28548384-28548491)
chr3 (397-487)||(20509837-20509927)
chr3 (367-485)||(21157411-21157529)
chr3 (198-364)||(30187531-30187697)
chr3 (367-484)||(45056952-45057069)
chr3 (373-470)||(45347916-45348013)
chr3 (367-487)||(22289395-22289515)
chr3 (375-483)||(38888756-38888864)
chr3 (372-487)||(7899375-7899490)
chr3 (367-487)||(2566921-2567040)
chr3 (373-468)||(39664762-39664857)
chr3 (367-487)||(19421769-19421879)
chr3 (367-472)||(30787240-30787342)
chr3 (373-487)||(2123034-2123148)
chr3 (367-472)||(35390233-35390332)
chr3 (379-449)||(48334268-48334338)
chr3 (372-487)||(28968858-28968973)
chr3 (372-483)||(47642357-47642468)
chr3 (377-483)||(983521-983627)
chr3 (390-484)||(13352869-13352963)
chr3 (367-472)||(22311216-22311315)
chr3 (367-472)||(28882212-28882311)
chr3 (367-472)||(42464272-42464371)
chr3 (379-485)||(48333289-48333394)
chr3 (373-472)||(19349279-19349377)
chr3 (367-473)||(33241219-33241319)
chr3 (373-472)||(10224297-10224390)
chr3 (367-472)||(22610409-22610508)
chr3 (367-472)||(45532195-45532294)
chr3 (367-472)||(48123712-48123811)
chr3 (367-472)||(52121650-52121749)
chr3 (367-472)||(52504955-52505054)
chr3 (367-472)||(25936210-25936309)
chr3 (367-472)||(1678816-1678911)
chr3 (367-487)||(28705613-28705723)
chr3 (417-472)||(50286923-50286978)
chr3 (19-92)||(30187803-30187876)
chr3 (367-396)||(7328169-7328198)
chr3 (367-396)||(37996434-37996463)
chr3 (367-396)||(40499339-40499368)
[»] chr8 (36 HSPs)
chr8 (367-487)||(20182714-20182834)
chr8 (367-487)||(40412890-40413010)
chr8 (373-484)||(32933-33044)
chr8 (367-487)||(8170757-8170877)
chr8 (367-487)||(5818004-5818124)
chr8 (376-483)||(27886528-27886635)
chr8 (376-483)||(27945186-27945293)
chr8 (376-483)||(28025429-28025536)
chr8 (367-484)||(3892292-3892409)
chr8 (175-364)||(32555402-32555590)
chr8 (367-487)||(27108846-27108966)
chr8 (376-483)||(27968443-27968550)
chr8 (372-487)||(28737845-28737960)
chr8 (372-487)||(7411949-7412064)
chr8 (374-487)||(37372577-37372685)
chr8 (394-483)||(41098645-41098734)
chr8 (367-473)||(25022639-25022739)
chr8 (367-472)||(12579662-12579761)
chr8 (367-472)||(19436738-19436837)
chr8 (367-472)||(19572887-19572986)
chr8 (367-472)||(28875698-28875797)
chr8 (367-472)||(6028978-6029077)
chr8 (367-472)||(45216353-45216452)
chr8 (367-487)||(5540293-5540407)
chr8 (372-472)||(42949555-42949649)
chr8 (367-472)||(32760240-32760339)
chr8 (367-472)||(32877943-32878042)
chr8 (367-472)||(36484309-36484408)
chr8 (367-472)||(43770837-43770936)
chr8 (372-472)||(32638352-32638446)
chr8 (367-472)||(37669454-37669553)
chr8 (367-472)||(4246815-4246910)
chr8 (367-472)||(19947508-19947607)
chr8 (367-472)||(34900503-34900598)
chr8 (179-229)||(28211446-28211496)
chr8 (367-396)||(16384993-16385022)
[»] chr2 (37 HSPs)
chr2 (372-487)||(31235842-31235957)
chr2 (19-356)||(21829931-21830268)
chr2 (367-487)||(40536542-40536662)
chr2 (372-487)||(4355637-4355752)
chr2 (367-483)||(10573833-10573950)
chr2 (367-472)||(44156937-44157042)
chr2 (372-484)||(1005840-1005952)
chr2 (367-487)||(35996856-35996976)
chr2 (372-487)||(3564165-3564279)
chr2 (367-462)||(14216908-14217003)
chr2 (372-487)||(14824464-14824579)
chr2 (367-485)||(5588365-5588483)
chr2 (375-487)||(45158835-45158947)
chr2 (372-487)||(4562114-4562229)
chr2 (373-484)||(28746339-28746450)
chr2 (374-487)||(34146527-34146640)
chr2 (197-364)||(14833150-14833316)
chr2 (372-487)||(24585861-24585976)
chr2 (372-484)||(3545237-3545349)
chr2 (390-484)||(12206315-12206409)
chr2 (367-487)||(2319621-2319739)
chr2 (367-487)||(22485140-22485254)
chr2 (372-484)||(35342667-35342779)
chr2 (171-364)||(33035266-33035459)
chr2 (367-472)||(6125059-6125158)
chr2 (367-472)||(18301461-18301560)
chr2 (367-472)||(20537214-20537313)
chr2 (372-487)||(21104820-21104934)
chr2 (367-472)||(4169654-4169753)
chr2 (367-472)||(5371448-5371547)
chr2 (367-472)||(12819688-12819787)
chr2 (367-472)||(40307969-40308068)
chr2 (367-472)||(40431689-40431800)
chr2 (372-487)||(9293709-9293828)
chr2 (420-483)||(33737744-33737807)
chr2 (367-396)||(7806992-7807021)
chr2 (367-396)||(16562174-16562203)
[»] chr5 (45 HSPs)
chr5 (373-487)||(1795719-1795833)
chr5 (367-487)||(39796617-39796737)
chr5 (367-487)||(1921108-1921228)
chr5 (367-483)||(3934460-3934576)
chr5 (367-487)||(26691964-26692084)
chr5 (367-487)||(26961696-26961816)
chr5 (372-487)||(26716598-26716713)
chr5 (372-487)||(26986338-26986453)
chr5 (372-487)||(27938484-27938599)
chr5 (372-482)||(9728066-9728176)
chr5 (367-487)||(6242681-6242801)
chr5 (367-483)||(21251813-21251929)
chr5 (372-487)||(41233642-41233757)
chr5 (367-483)||(9654079-9654195)
chr5 (367-487)||(30777061-30777181)
chr5 (372-483)||(25749935-25750046)
chr5 (372-487)||(42365779-42365894)
chr5 (373-487)||(43357439-43357551)
chr5 (372-487)||(18001634-18001749)
chr5 (367-462)||(35746067-35746162)
chr5 (367-485)||(5612124-5612242)
chr5 (367-484)||(3701413-3701530)
chr5 (367-468)||(30284251-30284352)
chr5 (367-484)||(27085698-27085819)
chr5 (372-487)||(7629371-7629486)
chr5 (372-487)||(34032697-34032808)
chr5 (367-487)||(22738175-22738298)
chr5 (372-487)||(11907638-11907747)
chr5 (367-487)||(39689862-39689976)
chr5 (401-488)||(14836657-14836744)
chr5 (367-472)||(30919032-30919131)
chr5 (213-369)||(17204945-17205100)
chr5 (367-472)||(5985609-5985708)
chr5 (373-472)||(26794139-26794232)
chr5 (405-472)||(10657333-10657400)
chr5 (405-487)||(17137945-17138026)
chr5 (396-460)||(11694466-11694530)
chr5 (367-472)||(1638924-1639021)
chr5 (279-370)||(32225599-32225690)
chr5 (431-487)||(15066538-15066594)
chr5 (416-487)||(5722324-5722395)
chr5 (367-472)||(9793184-9793279)
chr5 (420-482)||(12190645-12190707)
chr5 (367-396)||(7977603-7977632)
chr5 (420-465)||(10154313-10154358)
[»] chr6 (23 HSPs)
chr6 (367-487)||(32018443-32018563)
chr6 (372-487)||(27084299-27084414)
chr6 (367-484)||(13045033-13045150)
chr6 (192-364)||(3025087-3025259)
chr6 (367-487)||(13061026-13061146)
chr6 (372-487)||(11105634-11105749)
chr6 (373-482)||(234645-234754)
chr6 (367-487)||(3212916-3213036)
chr6 (367-470)||(7255282-7255385)
chr6 (367-487)||(13607428-13607552)
chr6 (367-487)||(3299384-3299504)
chr6 (373-484)||(19128482-19128593)
chr6 (394-487)||(6707718-6707811)
chr6 (367-469)||(4153213-4153315)
chr6 (394-483)||(10894196-10894286)
chr6 (367-487)||(7187910-7188024)
chr6 (394-483)||(26327646-26327735)
chr6 (367-472)||(8357767-8357866)
chr6 (367-472)||(32130191-32130290)
chr6 (367-406)||(22988794-22988833)
chr6 (367-406)||(23799563-23799602)
chr6 (367-472)||(1035948-1036043)
chr6 (367-396)||(31187088-31187117)
[»] scaffold1951 (1 HSPs)
scaffold1951 (198-364)||(741-907)
[»] scaffold0005 (2 HSPs)
scaffold0005 (372-487)||(202439-202547)
scaffold0005 (367-472)||(43737-43836)
[»] scaffold0250 (1 HSPs)
scaffold0250 (367-472)||(6015-6114)
[»] scaffold0060 (1 HSPs)
scaffold0060 (367-472)||(29776-29875)
[»] scaffold0285 (1 HSPs)
scaffold0285 (401-482)||(13729-13810)
[»] scaffold0112 (1 HSPs)
scaffold0112 (419-472)||(41276-41329)


Alignment Details
Target: chr1 (Bit Score: 272; Significance: 1e-151; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 272; E-Value: 1e-151
Query Start/End: Original strand, 19 - 330
Target Start/End: Complemental strand, 32799307 - 32798996
Alignment:
Q  19 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatcttcttcataggagagtactctcgcatga 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||    
T  32799307 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatcttcttcgtaggagaatattcccgcatga 32799208  T
Q  119 cgacactatttgtgtgggtgggtgtggcttcccggagtccgtgggtcatctattttttcattgcgacttcttcggtagcttgtggcaccttgtttatcag 218  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32799207 cgacactatttgtgtgggtgggtgtggctgcccggagtccctgggtcatctattttttcattgcgacttcttcggtagcttgtggcaccttgtttatcgg 32799108  T
Q  219 tggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgcggtcaactcattcttttctcc 318  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32799107 tggatcgttatcattttcacacctccccaatccgtctgagaacatctacatcaatttggacatttggcaggattaccgcggtcaactcattcttttctcc 32799008  T
Q  319 aagtgatctggc 330  Q
    ||||||||||||    
T  32799007 aagtgatctggc 32798996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 341 - 487
Target Start/End: Complemental strand, 32797662 - 32797516
Alignment:
Q  341 ctgggttgtctggaaggaaagaaatagcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgat 440  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  32797662 ctgggttgtctgaaaggaaagaaatagcaagtatattaacaaacacaagaaaccaatcataggctcgtagcatatcaacataaatataagtaatattgac 32797563  T
Q  441 gattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  32797562 gattaagagagtgatgattagtcaattacatatataatatatcccaa 32797516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 24851937 - 24851817
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  24851937 gcaaatatattaacaaacaaaagaaaccagtcattggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 24851838  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  24851837 tacatacacaatatatcccaa 24851817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 373 - 487
Target Start/End: Complemental strand, 9782083 - 9781969
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||    
T  9782083 atattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgattagtcaattacgta 9781984  T
Q  473 tataatatatcccaa 487  Q
     | ||||||||||||    
T  9781983 cacaatatatcccaa 9781969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 32380731 - 32380851
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| | ||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||| ||    
T  32380731 gcaaatatattaacaaacaaaagaaatcggtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcgat 32380830  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| ||||||||||||||    
T  32380831 tacatacataatatatcccaa 32380851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 373 - 487
Target Start/End: Complemental strand, 29862239 - 29862125
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  29862239 atattaacaaacaaaagaaaccagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacata 29862140  T
Q  473 tataatatatcccaa 487  Q
     | ||||||||||||    
T  29862139 cacaatatatcccaa 29862125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 29168392 - 29168275
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||| || |||||||||| |||||||||||||||    
T  29168392 gcaaatatattagcaaacaaaagaaaccagccataggctcgtagcacatcaacataaatataaataatatcgacgattaagagagtgatgattagtcaat 29168293  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  29168292 tacatacacaatatatcc 29168275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 9528517 - 9528637
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||| ||||||| ||||||| |||||||| | |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  9528517 gcaaatatattaataaacaaaagaaactagtcatatgctcgtagtacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 9528616  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  9528617 tacatacacaatatatcccaa 9528637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 10822839 - 10822719
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| | ||||||||||||||| | || ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  10822839 gcaaatatattaacaaacaaaagaaaaccgtcataggctcgtagtacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaat 10822740  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  10822739 tacatacacaatatatcccaa 10822719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 373 - 487
Target Start/End: Original strand, 34096231 - 34096345
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||| | |||||||||||    
T  34096231 atattaacaaacaaaagaaaccattcataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgacgatcaatcaattacata 34096330  T
Q  473 tataatatatcccaa 487  Q
     | ||||| ||||||    
T  34096331 cacaatatgtcccaa 34096345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 367 - 461
Target Start/End: Complemental strand, 15418014 - 15417920
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattag 461  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| |||||||||| ||| ||||||    
T  15418014 gcaaatatattaacaaacacaagaaaccggtcataggctcgtatcatatcaacataaatataaataatattgacgattaagagagtgaagattag 15417920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 14167514 - 14167394
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||| || |||  ||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||    
T  14167514 gcaaatatattaataaacaaaataaattagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaat 14167415  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  14167414 tacatacacaatatatcccaa 14167394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 37922659 - 37922539
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||||| ||||||||  |||||||||| | || || | |||||    
T  37922659 gcaagtatattaacaaacacaagaaaccattcataggctcatatcacatcaacataaatataaataatattggcgattaagagagttataatcaatcaat 37922560  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  37922559 tacatacacaatatatcccaa 37922539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 3707945 - 3708069
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagt---cataggctcgt-agcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 462  Q
    |||| |||||||||||||| || |||| |||   ||||||||||| |||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  3707945 gcaaatatattaacaaacaaaataaactagtagtcataggctcgttagcacatcaacataaatataaataatattgacgattaagagagtgatgattagt 3708044  T
Q  463 caattacatatataatatatcccaa 487  Q
    |||||||||| | ||||||||||||    
T  3708045 caattacatacacaatatatcccaa 3708069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 367 - 483
Target Start/End: Original strand, 34432089 - 34432204
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||| |||| ||||||| | |||||||||| ||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  34432089 gcaaatatattaacgaacaaaagaaacaa-tcataggctcttagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 34432187  T
Q  467 tacatatataatatatc 483  Q
    |||||| | ||||||||    
T  34432188 tacatacacaatatatc 34432204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 374 - 469
Target Start/End: Original strand, 24589782 - 24589877
Alignment:
Q  374 tattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattac 469  Q
    ||||||||||||  | |||| ||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  24589782 tattaacaaacaacaaaaactagtcataggctcgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattac 24589877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 367 - 466
Target Start/End: Complemental strand, 33040824 - 33040725
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||| ||||||||| |||||||||| |||| |||| |||||    
T  33040824 gcaaatatattaacaaacaaaagaaacgagtcataggtttgtagcatatcaacataaatataaataatattgacgattaagagagtgattattattcaat 33040725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 28948340 - 28948454
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  28948340 gcaagtatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 28948433  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  28948434 tacatacacaatatataccaa 28948454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 36551845 - 36551730
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| || |||||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||||  |||| |||||||||    
T  36551845 tatattaacaaacaacataaatcaatcataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgattgttagccaattacat 36551746  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  36551745 acacaatatatcccaa 36551730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 28658539 - 28658648
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||||      ||||||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||||||||||||    
T  28658539 tatattaacaaacacaagaaac------taggctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaattacat 28658632  T
Q  472 atataatatatcccaa 487  Q
    ||  ||||||| ||||    
T  28658633 atgcaatatataccaa 28658648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 37346489 - 37346588
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  37346489 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 37346582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 43190231 - 43190132
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| ||||||||||||||     
T  43190231 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtgatgattagtcaaa 43190138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 3427831 - 3427732
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||    
T  3427831 gcaagtatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaat 3427738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 5985160 - 5985061
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||||| |||    
T  5985160 gcaaatatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtaaat 5985067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 13012529 - 13012628
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||    
T  13012529 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaat 13012622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 31652979 - 31653047
Alignment:
Q  404 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  31652979 ctcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 31653047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 25257588 - 25257491
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| ||  | |||||||||    
T  25257588 gcaaatatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtg--gtttagtcaat 25257497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 372 - 439
Target Start/End: Complemental strand, 38218804 - 38218737
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattga 439  Q
    ||||||||||||||  | ||||||||||||||||||||| | |||||||||||||||| |||||||||    
T  38218804 tatattaacaaacaacataaaccagtcataggctcgtagtacatcaacataaatataaataatattga 38218737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 14334743 - 14334644
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||| ||||      ||| ||||||| | || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  14334743 gcaaatatattaacaaacacaaaaaac------tagactcgtagtacattaacataaatataaataatattgacgattaagagagtgttgattagtcaat 14334650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 47656121 - 47656062
Alignment:
Q  390 aaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagag 449  Q
    ||||||||||||||||||||||| |||||||||||||||| | ||| ||| |||||||||    
T  47656121 aaaccagtcataggctcgtagcacatcaacataaatataaattatactgacgattaagag 47656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 8133153 - 8133043
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      |||||||||||| || || |||||||    ||||||||| |||||||||| || | ||||| ||||    
T  8133153 gcaagtatattaacaaacacaagaaacc------aggctcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagccaat 8133064  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||  ||||||| ||||    
T  8133063 tacatatgcaatatataccaa 8133043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 30324693 - 30324597
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||       |||||||||| || ||||||||||||| ||||||||  || ||||||| || | ||||||||||    
T  30324693 gcaaatatattaacaaacacaagaaaccaa------gctcgtagcacattaacataaatataaataatattggcgaataagagagtggtcattagtcaat 30324600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 6915996 - 6916091
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  6915996 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 6916085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 38331423 - 38331328
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  38331423 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 38331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 52894835 - 52894930
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  52894835 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 52894924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 36363199 - 36363228
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  36363199 gcaagtatattaacaaacacaagaaaccag 36363228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 37104621 - 37104592
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  37104621 gcaagtatattaacaaacacaagaaaccag 37104592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 118; Significance: 8e-60; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 19 - 364
Target Start/End: Complemental strand, 9600846 - 9600501
Alignment:
Q  19 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatcttcttcataggagagtactctcgcatga 118  Q
    |||| |||||||||||||||||  ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| |||||||||  |     ||||    
T  9600846 aacaggttccgttaaaggtgtcagtgttcgtttggcgactacttcgcaatagactccccaccaaagataatcttcttcgtaggagagtcattcataatga 9600747  T
Q  119 cgacactatttgtgtgggtgggtgtggcttcccggagtccgtgggtcatctattttttcattgcgacttcttcggtagcttgtggcaccttgtttatcag 218  Q
    ||||||||||||||| || ||||||||||||| |||| ||   | ||| ||||||||||  || || || || || ||||| ||||| ||||||||||||    
T  9600746 cgacactatttgtgttggcgggtgtggcttcctggagaccacagatcacctattttttcgatgtgatttttttggcagcttatggcatcttgtttatcag 9600647  T
Q  219 tggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgcggtcaactcattcttttctcc 318  Q
    ||||||| ||||| || |||||||||  | |  ||  | |||||||| ||||||||||| |||||||| ||||||||  |||  ||||||||||||||      
T  9600646 tggatcggtatcaattgcacacctccagagtttgtgagtgaacatcttcatcaatttggtcatttggcgggattaccatggtttactcattcttttctta 9600547  T
Q  319 aagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    |||||||||||||||| ||||  ||||| || ||||||||||||||    
T  9600546 aagtgatctggcacgcaggctgttgggtcgtttggaaggaaagaaa 9600501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 19 - 364
Target Start/End: Complemental strand, 9828417 - 9828072
Alignment:
Q  19 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatcttcttcataggagagtactctcgcatga 118  Q
    |||| |||||||||||||||||  ||||||||||| || ||||||||||| ||||||||||||||||||||||||||| |||||||||  |     ||||    
T  9828417 aacaggttccgttaaaggtgtcagtgttcgtttggcgactacttcgcaatagactccccaccaaagataatcttcttcgtaggagagtcattcataatga 9828318  T
Q  119 cgacactatttgtgtgggtgggtgtggcttcccggagtccgtgggtcatctattttttcattgcgacttcttcggtagcttgtggcaccttgtttatcag 218  Q
    ||||||||||||||| || ||||||||||||| |||| ||   | ||| ||||||||||  || || || || || ||||| ||||| ||||||||||||    
T  9828317 cgacactatttgtgttggcgggtgtggcttcctggagaccacagatcacctattttttcgatgtgatttttttggcagcttatggcatcttgtttatcag 9828218  T
Q  219 tggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgcggtcaactcattcttttctcc 318  Q
    ||||||| ||||| || |||||||||  | |  ||  | |||||||| ||||||||||| |||||||| ||||||||  |||  ||||||||||||||      
T  9828217 tggatcggtatcaattgcacacctccagagtttgtgagtgaacatcttcatcaatttggtcatttggcgggattaccatggtttactcattcttttctta 9828118  T
Q  319 aagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    |||||||||||||||| ||||  ||||| || ||||||||||||||    
T  9828117 aagtgatctggcacgcaggctgttgggtcgtttggaaggaaagaaa 9828072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 11058878 - 11058758
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||||| |||||||||| |||||||| ||||||    
T  11058878 gcaaatatattaacaaacacaagaaactagtcatagtctggtagcacatcaacataaatataagtaatattgacgattaagagaatgatgatttgtcaat 11058779  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||||||||||||||||    
T  11058778 tacatatataatatatcccaa 11058758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 36757663 - 36757783
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  36757663 gcaaatatattaacaaacaaaagaaaccagttataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaat 36757762  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| ||||||||||||||    
T  36757763 tacatacataatatatcccaa 36757783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 36767187 - 36767307
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  36767187 gcaaatatattaacaaacaaaagaaaccagttataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaat 36767286  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| ||||||||||||||    
T  36767287 tacatacataatatatcccaa 36767307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 44270184 - 44270064
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  44270184 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaat 44270085  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  44270084 tacataaacaatatatcccaa 44270064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 554563 - 554683
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  554563 gcaaatatattaacaaacaaaagaaagcagtcataggctcgtagcacatcaacataaatataagtaatattaacgattaagagagtgatgattagtcaat 554662  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  554663 tacatacacaatatatcccaa 554683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 483
Target Start/End: Complemental strand, 35136471 - 35136355
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||    
T  35136471 gcaaatatattaacaaacacaataaaccagtcatagactcgtagcatatcaacataaatataagtaatattggcaattaagagaatgatgattagtcaat 35136372  T
Q  467 tacatatataatatatc 483  Q
    |||||||| ||||||||    
T  35136371 tacatatacaatatatc 35136355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 36763443 - 36763560
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||||||||||||||    
T  36763443 gcaaatatattaacaaacaaaagaaaccagttataggctcgtagcacatcaacataaatataaataacattgatgattaagagagtgatgattagtcaat 36763542  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  36763543 tacatacacaatatatcc 36763560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 21180277 - 21180162
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| |||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| ||    
T  21180277 tatattaacaaacaaaagaaatcagtcataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattagat 21180178  T
Q  472 atataatatatcccaa 487  Q
    ||| ||||||||||||    
T  21180177 atacaatatatcccaa 21180162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 23078760 - 23078880
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| |||||    
T  23078760 gcaaatatattaacaaacaaaagaaaccaatcataggctcatagcacatcaacataaatataaataatattgacgattaagagagtgatgattactcaat 23078859  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  23078860 tacatacacaatatatcccaa 23078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 9249962 - 9250082
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  9249962 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 9250061  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  9250062 tacatacacaatatataccaa 9250082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 9283512 - 9283632
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  9283512 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 9283611  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  9283612 tacatacacaatatataccaa 9283632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 471
Target Start/End: Original strand, 19820649 - 19820753
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||| | | |||||||||||||||    
T  19820649 gcaaatatattaacaaacacaagaaaccagtcataggttcgtagcacatcaacataaatataaataatattgacgattaaaatagtgatgattagtcaat 19820748  T
Q  467 tacat 471  Q
    |||||    
T  19820749 tacat 19820753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 25969971 - 25969851
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  25969971 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 25969872  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  25969871 tacatacacaatatataccaa 25969851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 163 - 364
Target Start/End: Original strand, 25480656 - 25480857
Alignment:
Q  163 gtcatctattttttcattgcgacttcttcggtagcttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaaca 262  Q
    |||||||||||||||  || || ||||| ||||| ||||||||||| |||||||||||||| | ||||| ||||||||||||    || ||| | |||||    
T  25480656 gtcatctattttttcgatgtgaattctttggtagtttgtggcacctcgtttatcagtggattgttatcaatttcacacctccaggttctgtcagtgaaca 25480755  T
Q  263 tctccatcaatttggacatttggcaggattaccgcggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaaga 362  Q
    ||| ||||| || || ||  |||| |||||||| | ||  ||| ||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||    
T  25480756 tcttcatcagttcggtcacatggcgggattaccacagtttacttattcttacctccaagtgatctggcacgcaggctgctgggttgtctggaaggaaaga 25480855  T
Q  363 aa 364  Q
    ||    
T  25480856 aa 25480857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 36413811 - 36413694
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| || ||||| ||| |||||    
T  36413811 gcaaatatattaacaaacaaaagaaatcagtcatagactcgtagcacatcaacataaatataaataatattgatgattaagtgagtgatgcttaatcaat 36413712  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  36413711 tacatacacaatatatcc 36413694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 24956689 - 24956569
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||| |||||| |||||| |||||||| ||||||| || |||||||||||||||| |||||||||  ||||| ||| |||||||||||||||    
T  24956689 gcaaatatattagcaaacaaaagaaatcagtcatatgctcgtaacacatcaacataaatataaataatattgacaattaatagagtgatgattagtcaat 24956590  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| ||||||||||||||    
T  24956589 tacatacataatatatcccaa 24956569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 35160330 - 35160210
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||| |||| ||||||||| |||||||||||||||| ||| ||| || ||||||||| |||||||||||||||    
T  35160330 gcaaatatattaacaaacaaaagaaatcagttatagactcgtagcacatcaacataaatataaataacattaataattaagagagtgatgattagtcaat 35160231  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  35160230 tacatacacaatatatcccaa 35160210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 483
Target Start/End: Original strand, 44958988 - 44959104
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||| ||| |||||| ||||||||||||||||||||||| | ||||| |||| ||||||||| |||||||||| |||||||||||||||    
T  44958988 gcaaatatattaacagacaaaagaaatcagtcataggctcgtagcatatccatataaacataaataatattgacgattaagagagtgatgattagtcaat 44959087  T
Q  467 tacatatataatatatc 483  Q
    |||||| | ||||||||    
T  44959088 tacatacacaatatatc 44959104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 15878080 - 15878195
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  15878080 tatattaacaaacaacataaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacat 15878179  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  15878180 acacaatatatcccaa 15878195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 26973497 - 26973388
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||  |||| |||||||||||    
T  26973497 atattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacaattactcaattacata 26973398  T
Q  473 tataatatat 482  Q
    |  |||||||    
T  26973397 tccaatatat 26973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 21409826 - 21409712
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||| |||||||||||| ||||| |||||||||||| ||| ||||||||| |||||||||| || |||||||||||||||||    
T  21409826 tatattaacaaacaaaagaaac-agtcataggctcatagcacatcaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattacat 21409728  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||| ||||    
T  21409727 acacaatatattccaa 21409712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 48153981 - 48153867
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || |||| ||||||||||||||| || |||||||||||||||| ||||  ||| |||||||||| ||||||||||||||||||||    
T  48153981 tatattaacaaacaaaaaaaac-agtcataggctcgtaacacatcaacataaatataaataatggtgacgattaagagagtgatgattagtcaattacat 48153883  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  48153882 acacaatatatcccaa 48153867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 390 - 487
Target Start/End: Complemental strand, 38065111 - 38065014
Alignment:
Q  390 aaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||||| | | |||||||||||||||||||   ||||||||||||    
T  38065111 aaaccagtcataggctcgaagcacatcaacataaatataaacaatattgatgattaagatagtcatgattagtcaattacatacgcaatatatcccaa 38065014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 472
Target Start/End: Original strand, 47237886 - 47237982
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||||||     |||||||||||| || ||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||    
T  47237886 tatattaacaaacataagaaaccaa----aggctcgtagcacattaacataaatataaataatattgacgattaagaaagtgatgattagtcaattacat 47237981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 47719856 - 47719926
Alignment:
Q  417 aacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||| ||||    
T  47719856 aacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacataatatataccaa 47719926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Original strand, 1399949 - 1400039
Alignment:
Q  396 gtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||||||||| | ||||| |||||||||| ||||||||| |||||||| | |||| |||||||||||||||| | ||||||||||||    
T  1399949 gtcataggctcgtagtacatcaa-ataaatataaataatattgacgattaagatagtgattattagtcaattacatacacaatatatcccaa 1400039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 396 - 487
Target Start/End: Complemental strand, 33454505 - 33454414
Alignment:
Q  396 gtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||| |||||||||||||||||||||||||| | |||  || |||||||||| |||||||||||| |||||||| | ||||||| ||||    
T  33454505 gtcatagactcgtagcatatcaacataaatataaattataccgacgattaagagaatgatgattagtcgattacatacacaatatataccaa 33454414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 414 - 473
Target Start/End: Complemental strand, 40053686 - 40053627
Alignment:
Q  414 atcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 473  Q
    |||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||    
T  40053686 atcaacataaatataaataatattgatgactaagagagtgatgattagtcaattacatat 40053627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 16563887 - 16563986
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      |||  |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  16563887 gcaaatatattaacaaacacaagaaac------tagattcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 16563980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 16601775 - 16601676
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      |||  |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  16601775 gcaaatatattaacaaacacaagaaac------tagattcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 16601682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 39521549 - 39521450
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| ||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | |||| |||||    
T  39521549 gcaaggatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattaatcaat 39521456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 47719762 - 47719832
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatatt 437  Q
    |||| ||||| ||||||||||||||| |||||||||||||||| || |||||||||||||||| |||||||    
T  47719762 gcaaatatatcaacaaacacaagaaatcagtcataggctcgtaacacatcaacataaatataaataatatt 47719832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 472
Target Start/End: Original strand, 26773257 - 26773324
Alignment:
Q  405 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  26773257 tcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 26773324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 4292142 - 4292043
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| || |||| | |||||||||| || ||||||||||||    
T  4292142 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaatactattaacgattaagagagtggtgattagtcaat 4292049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 8029283 - 8029184
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||| ||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || |||||||||| |    
T  8029283 gcaaatatattaacgaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcact 8029190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 19511090 - 19510991
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || |||| |||||||| |||||||||  ||||||||| || ||||||||||||    
T  19511090 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacaaaaatataaataatattgacaattaagagagtggtgattagtcaat 19510997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 404 - 487
Target Start/End: Original strand, 23969840 - 23969919
Alignment:
Q  404 ctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||| ||||||||||||||||    || ||| |||||||||| ||||||||||||||||||||| | ||| ||||||||    
T  23969840 ctcgtagcacatcaacataaatataa----tagtgacgattaagagagtgatgattagtcaattacatacacaatttatcccaa 23969919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 27397251 - 27397350
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||| ||||||||||| |      |||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  27397251 gcaaatatattaacaaacccaagaaaccagac------tcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 27397344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 487
Target Start/End: Complemental strand, 36661405 - 36661336
Alignment:
Q  418 acataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||||| ||||||||| |||||||||| || | ||||||||||||||||  |||||||| ||||    
T  36661405 acataaatataaataatattgacgattaagagagtggtcattagtcaattacatacgtaatatataccaa 36661336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 472
Target Start/End: Original strand, 1042747 - 1042811
Alignment:
Q  408 tagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||||||||    
T  1042747 tagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaattacata 1042811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 40096643 - 40096548
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  40096643 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 40096554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 16851285 - 16851256
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  16851285 gcaagtatattaacaaacacaagaaaccag 16851256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 26843706 - 26843735
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  26843706 gcaagtatattaacaaacacaagaaaccag 26843735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 48163902 - 48163873
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  48163902 gcaagtatattaacaaacacaagaaaccag 48163873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 7e-45; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 7952784 - 7952904
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||| |||||    
T  7952784 gcaattatattaacaaacacaagaaaccagtcatacactcgtagcatatcaacataaatataagtaatattgacgattaaaagagtgatgattaatcaat 7952883  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||||||||||||||||    
T  7952884 tacatatataatatatcccaa 7952904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 30683333 - 30683453
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||| || |||||||||| ||||||||| |||||    
T  30683333 gcaaatatattaacaaacacaagaaaccagccatagactcgtagcatatcaacataaatataaataatatcgacgattaagagagtgatgattaatcaat 30683432  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||||||||||||||||    
T  30683433 tacatatataatatatcccaa 30683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 24784839 - 24784719
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  24784839 gcaaatatattaacaaacacaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 24784740  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  24784739 tacatacacaatatataccaa 24784719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 24823427 - 24823547
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  24823427 gcaaatatattaacaaacacaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 24823526  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  24823527 tacatacacaatatataccaa 24823547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 52721821 - 52721701
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  52721821 gcaaatatattaacaaacacaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 52721722  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  52721721 tacatacacaatatataccaa 52721701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 31945905 - 31946020
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  31945905 tatattaacaaacaaaataaaccagtcataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 31946004  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  31946005 acacaatatatcccaa 31946020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 373 - 487
Target Start/End: Complemental strand, 1177417 - 1177303
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  1177417 atattaacaaacaaaagaaaccagtcataggctcgtagaacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacata 1177318  T
Q  473 tataatatatcccaa 487  Q
     | ||||||||||||    
T  1177317 cacaatatatcccaa 1177303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 47607546 - 47607426
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| | |||| ||||||||||    
T  47607546 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagatagtgataattagtcaat 47607447  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  47607446 tacatacacaatatatcccaa 47607426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 40694515 - 40694395
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| | |||| ||||||||||||||||||| |||||||||||||||| |||||| ||  ||||||||| |||||||||||||||    
T  40694515 gcaaatatattaacaaacaaaggaaatcagtcataggctcgtagcacatcaacataaatataaataatatcgacaattaagagagtgatgattagtcaat 40694416  T
Q  467 tacatatataatatatcccaa 487  Q
    ||||||  |||||||||||||    
T  40694415 tacatacgtaatatatcccaa 40694395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 372 - 484
Target Start/End: Complemental strand, 51675228 - 51675116
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || |||| ||||||| |||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||    
T  51675228 tatattaacaaacaaaataaacaagtcatatgctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacat 51675129  T
Q  472 atataatatatcc 484  Q
    ||| |||||||||    
T  51675128 atacaatatatcc 51675116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 39958155 - 39958035
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| || ||||||||||||| || ||| |||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  39958155 gcaaatatattaacaaacacaagaaatcaatcataggctcgtaacacatcgacataaatataaataatattgacgattaagagagtggtgattagtcaat 39958056  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  39958055 tacatacacaatatataccaa 39958035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 373 - 483
Target Start/End: Original strand, 36511609 - 36511719
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||| | |||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  36511609 atattaacaaacaaaagaaaccggtcataggctcgtagcacatcaatacaaatataaataatattgacgattaagagagtgacgattagtcaattacata 36511708  T
Q  473 tataatatatc 483  Q
     | ||||||||    
T  36511709 caaaatatatc 36511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 42630129 - 42630246
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||| || ||||||||| | |||| || |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  42630129 gcaaatatattaacaaacaaaaggaaacagtcatagacacgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 42630228  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  42630229 tacatacacaatatatcc 42630246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 3108961 - 3109076
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||| |||| ||||| |||||||||    
T  3108961 tatattaacaaacaacataaatcagtcataggctcgtagcaaatcaacataaatataaataatattgacgattaaaagagtgattattagccaattacat 3109060  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  3109061 acacaatatatcccaa 3109076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 14614937 - 14614829
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||       ||||||||||||||||||    
T  14614937 tatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaa-------atgattagtcaattacat 14614845  T
Q  472 atataatatatcccaa 487  Q
    ||| | ||||||||||    
T  14614844 atacagtatatcccaa 14614829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 2586777 - 2586668
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| |||||||||||||| |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  2586777 tatattaacaaacaacataaatcagtcataggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacat 2586678  T
Q  472 atataatata 481  Q
    | | ||||||    
T  2586677 acacaatata 2586668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 372 - 472
Target Start/End: Original strand, 44521702 - 44521802
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| |||| ||| ||||||| || ||| |||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  44521702 tatattaacaaacaaaagaaatcagttatacgctcgtaacacatctacataaatataaataacattgacgattaagagagtgatgattagtcaattacat 44521801  T
Q  472 a 472  Q
    |    
T  44521802 a 44521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 24793387 - 24793502
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||| |||||||| |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||| ||    
T  24793387 tatattaacaaacaacataaatcagtcgtaggctcgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattagat 24793486  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  24793487 acacaatatatcccaa 24793502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 372 - 481
Target Start/End: Complemental strand, 17892710 - 17892601
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| |||||||||||| | |||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  17892710 tatattaacaaacaacataaatcagtcataggcttgcagcacatcaacataaatataaataatattgacgattaagagagtgattattagacaattacat 17892611  T
Q  472 atataatata 481  Q
    | | ||||||    
T  17892610 acacaatata 17892601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 391 - 487
Target Start/End: Original strand, 55900823 - 55900919
Alignment:
Q  391 aaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||||||||||||||| |||||||||||||||| | ||| | | ||||| |||| ||||||||||||||||||||| | ||||||| ||||    
T  55900823 aaccagtcataggctcgtagcacatcaacataaatataaattatactcacgattacgagaatgatgattagtcaattacatacacaatatataccaa 55900919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 5325150 - 5325249
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      ||||||| || || || |||||||||| ||||||||| |||||||||| |||| ||||||||||    
T  5325150 gcaagtatattaacaaacacaagaaaccag------gctcgtaacacattaatataaatataaataatattgacgattaagagagtgatcattagtcaat 5325243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 14795994 - 14795895
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      |||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  14795994 gcaagtatattaacaaacacaagaaaccag------gctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 14795901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 469
Target Start/End: Complemental strand, 51859240 - 51859138
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||| | |||||  |||||| || |||||||||||||||| ||||||||| ||||||| |  |||||||||||||||    
T  51859240 gcaaatatattaacaaacaaaagaaacaaatcataaactcgtaccacatcaacataaatataaataatattgacgattaagtgggtgatgattagtcaat 51859141  T
Q  467 tac 469  Q
    |||    
T  51859140 tac 51859138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 372 - 472
Target Start/End: Original strand, 43509574 - 43509668
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || |||||||||||||||||    
T  43509574 tatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaattacat 43509667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 372 - 483
Target Start/End: Original strand, 258751 - 258858
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||||||    ||| ||||||||| |||||| ||||||||| ||||| ||| |||||||||| |||| |||||||||||||||    
T  258751 tatattaacaaacaaaataaacca----tagactcgtagcaaatcaacttaaatataaataatagtgacgattaagagagtgataattagtcaattacat 258846  T
Q  472 atataatatatc 483  Q
    | | ||||||||    
T  258847 acacaatatatc 258858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 52573172 - 52573073
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  52573172 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 52573079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 5835415 - 5835316
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||| ||||||||      ||| |||||| || || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  5835415 gcaaatatattaacaaacgcaagaaac------tagactcgtaacacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 5835322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 10358767 - 10358829
Alignment:
Q  304 ctcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaata 366  Q
    |||||||||||||||| |||||||||||||| ||||  |||||||| ||||||||||||||||    
T  10358767 ctcattcttttctccatgtgatctggcacgccggctgttgggttgtttggaaggaaagaaata 10358829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 36944137 - 36944016
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagta------atattgatgattaagagactgatgattagtcaa 465  Q
    ||||||||||||||  | ||| |||||||||||||| | || |||||||||||||||| ||      ||||||| |||||||||| |||| ||||| |||    
T  36944137 tatattaacaaacaacataaatcagtcataggctcgcaacacatcaacataaatataaatataaataatattgacgattaagagattgattattagccaa 36944038  T
Q  466 ttacatatataatatatcccaa 487  Q
    ||||||| | ||||||||||||    
T  36944037 ttacatacacaatatatcccaa 36944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 41146590 - 41146491
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||    
T  41146590 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacataaacataaatataaataatattgacaattaagagagtggtcattagtcaat 41146497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 445
Target Start/End: Original strand, 46431612 - 46431690
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgatta 445  Q
    |||| |||||||||||||| || |||  |||||| |||| |||||| |||||||||||||||| |||||||||||||||    
T  46431612 gcaaatatattaacaaacaaaataaatgagtcatgggcttgtagcacatcaacataaatataaataatattgatgatta 46431690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 10258495 - 10258432
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataag 430  Q
    |||| ||||||| |||||| ||||||||||||||| ||| |||||| |||||||||||||||||    
T  10258495 gcaaatatattatcaaacaaaagaaaccagtcataagcttgtagcacatcaacataaatataag 10258432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 22492895 - 22492962
Alignment:
Q  420 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||||||||||||||| || |||| | |||  ||||||||||||||||||| |||||||||||    
T  22492895 ataaatataagtaatattgataataaagaaagtgacaattagtcaattacatatatgatatatcccaa 22492962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 418 - 472
Target Start/End: Complemental strand, 49470692 - 49470638
Alignment:
Q  418 acataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    |||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||    
T  49470692 acataaatataaataatattgacgattaagagagtgatgattaatcaattacata 49470638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 3402709 - 3402804
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||||||||||||||||||||||||       ||||| |||| || || ||||||||||    ||||||||||||||||| || | ||||||||||    
T  3402709 gcaagtatattaacaaacacaagaaaccat------gctcgcagcacattaatataaatataa----tattgatgattaagagagtggtcattagtcaat 3402798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 8063229 - 8063324
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  8063229 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 8063318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 372 - 472
Target Start/End: Complemental strand, 28377479 - 28377385
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||| ||||||||||      ||| ||| ||||| || ||||||||||||| ||||||||   ||||||||| || |||||||||||||||||    
T  28377479 tatattaacaagcacaagaaac------tagactcatagcacattaacataaatataaataatattggcaattaagagagtggtgattagtcaattacat 28377386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 483
Target Start/End: Complemental strand, 27982221 - 27982158
Alignment:
Q  420 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 483  Q
    |||||| |||||||||||||| || |||| |  ||| ||||||||||||||||||| |||||||    
T  27982221 ataaatgtaagtaatattgataataaagaaagcgataattagtcaattacatatatgatatatc 27982158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 7e-45; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 25322168 - 25322288
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  25322168 gcaaatatattaacaaacacaagaaaccaatcacaggctcatagcatatctacataaatataagtaatattgacgattaagagagtgatgattagtcaat 25322267  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||||||||||||||||    
T  25322268 tacatatataatatatcccaa 25322288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 52684794 - 52684674
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||| ||| || ||||||||||||    
T  52684794 gcaaatatattaacaaacacaagaaaccagtcatagactcgtagcacatcaacataaatataaataatattgacgattaaaagagtggtgattagtcaat 52684695  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  52684694 tacatacacaatatataccaa 52684674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 25701225 - 25701110
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||     
T  25701225 tatattaacaaacaaaagaaatcagtcataggctcgtaggacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacaa 25701126  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  25701125 acacaatatatcccaa 25701110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 19878754 - 19878871
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||| ||||||||||||||| | |||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  19878754 gcaaatatattaataaacaaaagaaaccagtcataagttcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 19878853  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  19878854 tacatacacaatatatcc 19878871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 480
Target Start/End: Original strand, 47750584 - 47750697
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||  |||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||    
T  47750584 gcaaatatattaattaacacaagaaaccagtcataggccggtaacatatcaacataaatataagtaatattgaagattaagagagtgatgattaatcaat 47750683  T
Q  467 tacatatataatat 480  Q
    |||||||| |||||    
T  47750684 tacatatacaatat 47750697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 21006014 - 21006134
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||||| ||||||||| |||||||||| || ||||||||||||    
T  21006014 gcaaatatattaacaaacacaagaaaccagtcacaggttcgtagcacatcaacatgaatataaataatattgacgattaagagagtggtgattagtcaat 21006113  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  21006114 tacatacacaatatataccaa 21006134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 373 - 487
Target Start/End: Original strand, 13748177 - 13748291
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| || |||||||| ||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  13748177 atattaacaaacaaaataaaccagttataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacata 13748276  T
Q  473 tataatatatcccaa 487  Q
     | ||||||||||||    
T  13748277 cacaatatatcccaa 13748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 372 - 462
Target Start/End: Original strand, 41741823 - 41741913
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 462  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  41741823 tatattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagt 41741913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 29916238 - 29916117
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgat-gattagtcaa 465  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||| |||||| |||| |||||||| |    
T  29916238 gcaaatatattaacaaacaaaagaaaccagtcatagactcgtagcatatcaacataaatataaataatattgtcgatcaagagagtgatggattagtcga 29916139  T
Q  466 ttacatatataatatatcccaa 487  Q
    ||||||| | ||||||||||||    
T  29916138 ttacataaacaatatatcccaa 29916117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 29965391 - 29965270
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgat-gattagtcaa 465  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||||||||  ||| |||||| |||| |||||||| |    
T  29965391 gcaaatatattaacaaacaaaagaaaccagtcatagactcgtagcatatcaacataaatataaataatattgtcgatcaagagagtgatggattagtcga 29965292  T
Q  466 ttacatatataatatatcccaa 487  Q
    ||||||| | ||||||||||||    
T  29965291 ttacataaacaatatatcccaa 29965270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 212956 - 212845
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||  ||||||||||||||| || |||||| ||||||||| ||||||||| |||||||||| |||| |||||||||||||||    
T  212956 tatattaacaaacaaaagaaattagtcataggctcgtaccacatcaacgtaaatataaataatattgacgattaagagagtgattattagtcaattacat 212857  T
Q  472 atataatatatc 483  Q
    | ||||||||||    
T  212856 acataatatatc 212845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 474
Target Start/End: Complemental strand, 28548491 - 28548384
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||   |||||||||| |||| ||||||||||    
T  28548491 gcaaatatattaacaaacataagaaactagtcataggctcgtagcacatcaacataaatataaataatattaccgattaagagagtgataattagtcaat 28548392  T
Q  467 tacatata 474  Q
    ||||||||    
T  28548391 tacatata 28548384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 397 - 487
Target Start/End: Original strand, 20509837 - 20509927
Alignment:
Q  397 tcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  20509837 tcataggctcgtagcacatcaacataaatataaataatagtgatgattaagagagtgatgattagtcaattacatacacaatatatcccaa 20509927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 367 - 485
Target Start/End: Original strand, 21157411 - 21157529
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||  | ||||||||||||||| |||| ||||| |||||||||||||| | ||||||||| |||||||||| |||||||||||||||    
T  21157411 gcaaatatattaacaagtaaaagaaaccagtcatatgctcttagcacatcaacataaatatgaataatattgacgattaagagagtgatgattagtcaat 21157510  T
Q  467 tacatatataatatatccc 485  Q
    |||||| | ||||||||||    
T  21157511 tacatacacaatatatccc 21157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 30187697 - 30187531
Alignment:
Q  198 ttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgc 297  Q
    |||||||| ||||| ||||||||||||| ||||| |||||| |||||  | |  || ||||| ||||| ||||||||||| ||||||||  |  ||||||    
T  30187697 ttgtggcatcttgtgtatcagtggatcggtatcaatttcactcctccagagtttgtgcgagatcatcttcatcaatttggtcatttggcgagtgtaccgc 30187598  T
Q  298 ggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    |||   ||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  30187597 ggtttgctcattcttttctccaagtgatctggcacgccggctgttgggttgtttggaaggaaagaaa 30187531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 45056952 - 45057069
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| ||||||  |  ||||||||| |||||||||||||||    
T  45056952 gcaaatatattaacaaacaaaagaaaccagtcttaggctcgtagcgcatcaacataaatataaataatatcaacaattaagagagtgatgattagtcaat 45057051  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  45057052 tacatacacaatatatcc 45057069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 373 - 470
Target Start/End: Complemental strand, 45348013 - 45347916
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattaca 470  Q
    ||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  45348013 atattaacaaacaaaagaaatcagtcataagctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattaca 45347916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 22289395 - 22289515
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||||| |||||||||||||| | |||||| ||||||||| ||||||||| |||||| ||| ||||||||| |||||    
T  22289395 gcaaatatattaacaaacaaaagaaaccattcataggctcgtagtacatcaacgtaaatataaataatattgacgattaatagagtgatgattattcaat 22289494  T
Q  467 tacatatataatatatcccaa 487  Q
    ||||||   ||||||||||||    
T  22289495 tacataccgaatatatcccaa 22289515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 375 - 483
Target Start/End: Original strand, 38888756 - 38888864
Alignment:
Q  375 attaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatata 474  Q
    ||||||||||| |||||| ||||||| |||| |||||| |||||||||||||||| ||||||||| |||||||| | ||||||||||||||||||||| |    
T  38888756 attaacaaacaaaagaaatcagtcatgggcttgtagcacatcaacataaatataaataatattgacgattaagacagtgatgattagtcaattacataca 38888855  T
Q  475 taatatatc 483  Q
     ||||||||    
T  38888856 caatatatc 38888864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 7899375 - 7899490
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||| |||||  | |||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  7899375 tatattaaaaaacaacataaaccagtcataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacat 7899474  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  7899475 acacaatatatcccaa 7899490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 2566921 - 2567040
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||  ||||| | |||| ||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  2566921 gcaaatatattaacaaacacaagaaat-agtcacaagctcctagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 2567019  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  2567020 tacatacacaatatataccaa 2567040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 373 - 468
Target Start/End: Complemental strand, 39664857 - 39664762
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaatta 468  Q
    ||||||||||||| |||||| ||| |||||||||||||||  ||||||||||||||| |||||||||||||||||||| ||| |||| ||||||||    
T  39664857 atattaacaaacaaaagaaatcaggcataggctcgtagcacgtcaacataaatataaataatattgatgattaagagagtgacgatttgtcaatta 39664762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 19421879 - 19421769
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||          ||||||| |||||||| |||||||||||||||    
T  19421879 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaa----------attgatgcttaagagagtgatgattagtcaat 19421790  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  19421789 tacatacacaatatatcccaa 19421769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 30787240 - 30787342
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||| ||   || ||||||||| |||||||||||||||| ||||||| | |||||||||| |||||||||||||||    
T  30787240 gcaaatatattaacaaacaaaagaaaccggt---agactcgtagcacatcaacataaatataaataatattaacgattaagagagtgatgattagtcaat 30787336  T
Q  467 tacata 472  Q
    ||||||    
T  30787337 tacata 30787342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 373 - 487
Target Start/End: Complemental strand, 2123148 - 2123034
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||| | ||||| |||||||| | |||||||||||||||| ||||||||| ||||||| |  |||||||||||||||||| |     
T  2123148 atattaacaaacaaaagaaacaaatcataagctcgtagaacatcaacataaatataaataatattgacgattaagtgggtgatgattagtcaattacttt 2123049  T
Q  473 tataatatatcccaa 487  Q
     | ||||||||||||    
T  2123048 cacaatatatcccaa 2123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 35390332 - 35390233
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  35390332 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagaatgatgattagtcaat 35390239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 48334338 - 48334268
Alignment:
Q  379 acaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagag 449  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||    
T  48334338 acaaacacaagaaaccagtcataggctcgtagcacatcaacataaatatatataatattgacgattaagag 48334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 28968973 - 28968858
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||||||||||||||||| ||||| |||||||||| |||||||||  ||||| ||| |||| ||||  |||||||||    
T  28968973 tatattaacaaacaacataaatcagtcataggctcgtagcacatcaatataaatataaataatattgacaattaatagagtgattattaaccaattacat 28968874  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  28968873 acacaatatatcccaa 28968858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 47642468 - 47642357
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||||||| |||| | || |||||||||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  47642468 tatattaacaaacaacataaatcagtcatagactcgcaacacatcaacataaatataaataatattgacgattaagagagtgattattagccaattacat 47642369  T
Q  472 atataatatatc 483  Q
    | | ||||||||    
T  47642368 acacaatatatc 47642357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 377 - 483
Target Start/End: Complemental strand, 983627 - 983521
Alignment:
Q  377 taacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatata 476  Q
    ||||||||| ||||||  |||||||| ||||||| | |||||| ||||||||| ||||||||| || ||||||| ||||||||| ||||||||||| | |    
T  983627 taacaaacaaaagaaattagtcatagtctcgtagtacatcaacgtaaatataaataatattgacgaataagagagtgatgattaatcaattacatacaca 983528  T
Q  477 atatatc 483  Q
    |||||||    
T  983527 atatatc 983521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 390 - 484
Target Start/End: Original strand, 13352869 - 13352963
Alignment:
Q  390 aaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 484  Q
    |||||| |||||||||||||||| ||||||||| |||||| ||||||||| |||||| ||  |||| |||||||||||||||| | |||||||||    
T  13352869 aaaccaatcataggctcgtagcacatcaacatagatataaataatattgaggattaaaagtatgataattagtcaattacatacacaatatatcc 13352963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 22311315 - 22311216
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  22311315 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 22311222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 28882212 - 28882311
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  28882212 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 28882305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 42464272 - 42464371
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| ||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  42464272 gcaaggatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 42464365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 48333394 - 48333289
Alignment:
Q  379 acaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataat 478  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||  |||||||||  ||||||||| ||| | | |||||| |||||| | |||    
T  48333394 acaaacacaagaaac-agtcataggctcgtagcacatcaacataaatatatataatattgacaattaagagagtgacggtcagtcaactacatacacaat 48333296  T
Q  479 atatccc 485  Q
    |||||||    
T  48333295 atatccc 48333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 19349279 - 19349377
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    |||||||||| || ||||||| |||||||||||| || || |||||||||||||||| | ||||||| ||||||||||  || |||||||||||||||||    
T  19349279 atattaacaa-caaaagaaactagtcataggctcataacacatcaacataaatataaattatattgacgattaagagagcgacgattagtcaattacata 19349377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 367 - 473
Target Start/End: Complemental strand, 33241319 - 33241219
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||       ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  33241319 gcaaatatattaacaaacacaagaaat------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 33241226  T
Q  467 tacatat 473  Q
    |||||||    
T  33241225 tacatat 33241219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 10224297 - 10224390
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||||||||||||||      |||||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||||||||    
T  10224297 atattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacata 10224390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 22610409 - 22610508
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||    
T  22610409 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaat 22610502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 45532195 - 45532294
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||||||  || | ||||||||||    
T  45532195 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaagagggtggtcattagtcaat 45532288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 48123811 - 48123712
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||| || | |      |||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  48123811 gcaagtatattaacaaacacaagaaacgagactt------gtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 48123718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 52121749 - 52121650
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| || |||| | |||||||||| || ||||||||||||    
T  52121749 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaatattatttacgattaagagagtggtgattagtcaat 52121656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 52504955 - 52505054
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||||||||||||||||||||||||| |      ||||| || || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  52504955 gcaagtatattaacaaacacaagaaaccagac------tcgtaacacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 52505048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 25936210 - 25936309
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||       | |||||||| || |||||||||||||  |||||||| |||||||||| || | ||||||||||    
T  25936210 gcaaatatattaacaaacacaagaaaccaa------gttcgtagcacattaacataaatataaacaatattgacgattaagagagtggtcattagtcaat 25936303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 1678816 - 1678911
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      |||||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  1678816 gcaagtatattaacaaacacaagaaacc------aggctcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 1678905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 28705723 - 28705613
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      |||||||||||| || || |||||||    ||||||||| |||||||||| || | ||||| ||||    
T  28705723 gcaagtatattaacaaacacaagaaacc------aggctcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagacaat 28705634  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||  ||||||| ||||    
T  28705633 tacatatgcaatatataccaa 28705613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 50286923 - 50286978
Alignment:
Q  417 aacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||| | |||||||||| || ||||||||||||||||||    
T  50286923 aacataaatataaataatattaacgattaagagagtggtgattagtcaattacata 50286978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 30187876 - 30187803
Alignment:
Q  19 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatctt 92  Q
    ||||||||| | ||||||| || ||||||||||||||| | |||||||  ||||| ||||| ||||||||||||    
T  30187876 aacatgttctgctaaaggtctcaatgttcgtttggagacttcttcgcagccgacttcccactaaagataatctt 30187803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 7328198 - 7328169
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  7328198 gcaagtatattaacaaacacaagaaaccag 7328169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 37996434 - 37996463
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  37996434 gcaagtatattaacaaacacaagaaaccag 37996463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 40499368 - 40499339
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  40499368 gcaagtatattaacaaacacaagaaaccag 40499339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 2e-42; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 20182834 - 20182714
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  20182834 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaat 20182735  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  20182734 tacataaacaatatatcccaa 20182714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 40413010 - 40412890
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  40413010 gcaaatatattaacaaacacaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 40412911  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  40412910 tacatacacaatatataccaa 40412890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 33044 - 32933
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  33044 atattaacaaataaaagaaaccagtcatatgctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacata 32945  T
Q  473 tataatatatcc 484  Q
    || |||||||||    
T  32944 tacaatatatcc 32933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 8170757 - 8170877
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||| ||||||||||||||||||||| |||| ||||||||||||| ||||||||| ||||||||| |||||||||| || ||||||||||||    
T  8170757 gcaaatatattaccaaacacaagaaaccagtcatgggcttgtagcatatcaacgtaaatataaataatattgacgattaagagagtggtgattagtcaat 8170856  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  8170857 tacatacacaatatataccaa 8170877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 5818004 - 5818124
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| || ||| |||||||||||||||||||||||||||||||||||| ||||||||   ||||||| | ||||||||||||||     
T  5818004 gcaaatatattaacaaacaaaataaatcagtcataggctcgtagcatatcaacataaatataaataatattgtccattaagaaagtgatgattagtcaac 5818103  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  5818104 tacatacacaatatatcccaa 5818124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 27886635 - 27886528
Alignment:
Q  376 ttaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatat 475  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| |     
T  27886635 ttaacaaacaaaagaaaccggtcataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacac 27886536  T
Q  476 aatatatc 483  Q
    ||||||||    
T  27886535 aatatatc 27886528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 27945293 - 27945186
Alignment:
Q  376 ttaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatat 475  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| |     
T  27945293 ttaacaaacaaaagaaaccggtcataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacac 27945194  T
Q  476 aatatatc 483  Q
    ||||||||    
T  27945193 aatatatc 27945186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 28025536 - 28025429
Alignment:
Q  376 ttaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatat 475  Q
    |||||||||| |||||||| |||||||||||||| || |||||||||||||||| ||||||||| ||| |||||| ||||||||||||||||||||| |     
T  28025536 ttaacaaacaaaagaaaccggtcataggctcgtatcacatcaacataaatataaataatattgacgatcaagagagtgatgattagtcaattacatacac 28025437  T
Q  476 aatatatc 483  Q
    ||||||||    
T  28025436 aatatatc 28025429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 3892409 - 3892292
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||  |||| || |||||||||||||||||||| || |||||||||||||||| ||||||||| ||||||||||  ||||||||||||||    
T  3892409 gcaaatatattaaataacaaaataaaccagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagcgatgattagtcaat 3892310  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  3892309 tacatacacaatatatcc 3892292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 175 - 364
Target Start/End: Original strand, 32555402 - 32555590
Alignment:
Q  175 ttcattgcgacttcttcggtagcttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatt 274  Q
    ||||||| |||||||| |||||||||||||||||||||| |||| ||||   ||| |  || || |||||  |||  || ||| ||||||| ||||| ||    
T  32555402 ttcattgtgacttcttaggtagcttgtggcaccttgtttttcag-ggatatgtattacctttacgcctcctgaatttgttcgataacatcttcatcattt 32555500  T
Q  275 tggacatttggcaggattaccgcggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    ||||||||| || |||||||  | ||| ||||||| |||||||||||||||||||||||| |||| |||||||| |||||||||||||||    
T  32555501 tggacattttgcgggattacaacagtctactcattattttctccaagtgatctggcacgccggctgctgggttgactggaaggaaagaaa 32555590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 27108846 - 27108966
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||| |   ||||||||||||| || |||||||||| ||||| |||||||||  ||||||||| |||||||||||||||    
T  27108846 gcaaatatattaacaaacaaaagaacctgatcataggctcgtaacacatcaacataactataaataatattgacaattaagagagtgatgattagtcaat 27108945  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| ||||||||||||||    
T  27108946 tacatacataatatatcccaa 27108966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 376 - 483
Target Start/End: Complemental strand, 27968550 - 27968443
Alignment:
Q  376 ttaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatat 475  Q
    |||||||||| |||||| | ||||||| |||||| || |||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||| |     
T  27968550 ttaacaaacaaaagaaatcggtcatagactcgtatcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacatacac 27968451  T
Q  476 aatatatc 483  Q
    ||||||||    
T  27968450 aatatatc 27968443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 28737960 - 28737845
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||| | ||||| | |||||||||||||||| | |||||||||||||||| ||| ||||| |||||| ||| ||||||||||||||||||||    
T  28737960 tatattaacaaataaaagaatctagtcataggctcgtagaacatcaacataaatataaataacattgacgattaaaagagtgatgattagtcaattacat 28737861  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  28737860 acacaatatatcccaa 28737845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 7412064 - 7411949
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | |||||| |||||||||||||||| || ||||||||| ||| ||||||||| |||||||||| || ||||||||||||| |||    
T  7412064 tatattaacaaacaacataaaccaatcataggctcgtagcacataaacataaatgtaaataatattgacgattaagagagtggtgattagtcaattgcat 7411965  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  7411964 aaacaatatatcccaa 7411949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 374 - 487
Target Start/End: Complemental strand, 37372685 - 37372577
Alignment:
Q  374 tattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 473  Q
    |||||||||||| |||||||||||||||||  |     | |||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||     
T  37372685 tattaacaaacaaaagaaaccagtcatagggac-----acatcaacataaatataaataatattgacgattaagagaatgatgattagtcaattacatac 37372591  T
Q  474 ataatatatcccaa 487  Q
    | ||||||||||||    
T  37372590 acaatatatcccaa 37372577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 394 - 483
Target Start/End: Original strand, 41098645 - 41098734
Alignment:
Q  394 cagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 483  Q
    ||||||||||||||||||| |||||||| ||||||| ||||  ||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  41098645 cagtcataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcaattacatacacaatatatc 41098734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 367 - 473
Target Start/End: Complemental strand, 25022739 - 25022639
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  25022739 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 25022646  T
Q  467 tacatat 473  Q
    |||||||    
T  25022645 tacatat 25022639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 12579662 - 12579761
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      ||||||||||| ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  12579662 gcaaatatattaacaaacacaagaaaccagac------tcgtagcatattaacataaatataaataatattgacgattaagagagtgttcattagtcaat 12579755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 19436837 - 19436738
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  19436837 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 19436744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 19572986 - 19572887
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  19572986 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 19572893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 28875698 - 28875797
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| ||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  28875698 gcaaggatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 28875791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 6029077 - 6028978
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| |||| |||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  6029077 gcaaatatattaacaaacacaagaaac------tagactcgcagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 6028984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 45216353 - 45216452
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      ||||||| || || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  45216353 gcaagtatattaacaaacacaagaaaccag------gctcgtaacacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 45216446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 5540407 - 5540293
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| ||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||  ||    
T  5540407 gcaaggatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtgttcattagtttat 5540314  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  5540313 tacatacacaatatataccaa 5540293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 372 - 472
Target Start/End: Complemental strand, 42949649 - 42949555
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||  ||||||||| |||||||||| || |||||||||||||||||    
T  42949649 tatattaacaaacacaagaaac------tagactcgtagcacattaacataaatatacataatattgacgattaagagagtggtgattagtcaattacat 42949556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 32760339 - 32760240
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||    
T  32760339 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaat 32760246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 32878042 - 32877943
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||       ||| ||||||||| || ||||||||||||| ||||||||| |||||| ||| || ||||||||||||    
T  32878042 gcaaatatattaacaaacacaagaaat------tagactcgtagcacattaacataaatataaataatattgacgattaatagagtggtgattagtcaat 32877949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 36484408 - 36484309
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||    
T  36484408 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacgattgagagagtggtcattagtcaat 36484315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 43770837 - 43770936
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||||||||||| ||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||    
T  43770837 gcaagtatattaacaatcacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaat 43770930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 472
Target Start/End: Original strand, 32638352 - 32638446
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||||||| | |      ||||||| | ||||||||||||| ||||||||| |||||||||| || | |||||||||||||||    
T  32638352 tatattaacaaacacaagaaaccagactt------gtagcatgttaacataaatataaataatattgacgattaagagagtggtcattagtcaattacat 32638445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 37669553 - 37669454
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||      |||||||  | || ||||||||||||| ||||||||| |||| ||||| || | ||||||||||    
T  37669553 gcaaatatattaacaaacacaagaaaccag------gctcgtactacattaacataaatataaataatattgacgattgagagagtggtcattagtcaat 37669460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 4246910 - 4246815
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      |||||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  4246910 gcaagtatattaacaaacacaagaaacc------aggctcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 4246821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 19947508 - 19947607
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||| ||||||||||||||      ||| || |||||| || ||||||||||||| ||||||||| |||||| | | || ||||||||||||    
T  19947508 gcaaatatattagcaaacacaagaaac------tagacttgtagcacattaacataaatataaataatattgacgattaacacagtggtgattagtcaat 19947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 34900503 - 34900598
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  34900503 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 34900592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 179 - 229
Target Start/End: Complemental strand, 28211496 - 28211446
Alignment:
Q  179 ttgcgacttcttcggtagcttgtggcaccttgtttatcagtggatcgatat 229  Q
    ||||||| |||| ||||||| |||||||||| ||||||||||||| |||||    
T  28211496 ttgcgacatctttggtagctcgtggcaccttatttatcagtggattgatat 28211446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 16385022 - 16384993
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  16385022 gcaagtatattaacaaacacaagaaaccag 16384993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 6e-42; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 31235842 - 31235957
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31235842 tatattaacaaacaaaagaaactagtcataggctcgtagcacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacat 31235941  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  31235942 acacaatatatcccaa 31235957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 356
Target Start/End: Original strand, 21829931 - 21830268
Alignment:
Q  19 aacatgttccgttaaaggtgtctatgttcgtttggagattacttcgcaatcgactccccaccaaagataatcttcttcataggagagtactctcgcatga 118  Q
    ||||||||||||||||||| ||  ||||||||||| || ||||||||||| ||||||| ||||||||||| | | ||  ||||||||| |||   |||||    
T  21829931 aacatgttccgttaaaggtttccgtgttcgtttggcgactacttcgcaatagactccctaccaaagataaacatttttgtaggagagtcctccatcatga 21830030  T
Q  119 cgacactatttgtgtgggtgggtgtggcttcccggagtccgtgggtcatctattttttcat-tgcgacttcttcggtagcttgtggcaccttgtttatca 217  Q
     | ||   ||||||| || | |||||||| |||||||      | ||| || ||| ||||| || ||| | || || |||||||||||||||||||| ||    
T  21830031 tggcatgctttgtgttggcgagtgtggctgcccggagaatacagttcacct-tttcttcatatgtgacatttttggcagcttgtggcaccttgtttacca 21830129  T
Q  218 gtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgcggtcaactcattcttttctc 317  Q
    ||||||||| |||| ||||||||||||  | ||| |||| |||||||| ||||| |||||||| ||||| ||||||||| |||  |||||||||||||||    
T  21830130 gtggatcgacatcaatttcacacctccagagtccatccgtgaacatcttcatcagtttggacacttggcgggattaccgtggtttactcattcttttctc 21830229  T
Q  318 caagtgatctggcacgctggcttctgggttgtctggaag 356  Q
    ||| ||||||||||||| ||||  |||||||| ||||||    
T  21830230 caaatgatctggcacgccggctgttgggttgtttggaag 21830268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 40536662 - 40536542
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  40536662 gcaaatatattaacaaacacaagaaaccaatcataggctcgtaaaatatcaacataaatataagtaatattgacgattaaaagagtgatgattagtcaat 40536563  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||| ||||||| ||||    
T  40536562 tacatatacaatatattccaa 40536542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 4355752 - 4355637
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| |||||||||| |||||||| |||||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||    
T  4355752 tatattaacaaacaaaagaaatcagtcataggttcgtagcacatcaacataaatataaataatattgacgactaagagagtgatgattagtcaattacat 4355653  T
Q  472 atataatatatcccaa 487  Q
    | ||||||||||||||    
T  4355652 acataatatatcccaa 4355637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 367 - 483
Target Start/End: Complemental strand, 10573950 - 10573833
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagt-aatattgatgattaagagactgatgattagtcaa 465  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| | |||||||| ||||||| || ||||||||||||||    
T  10573950 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataaatattgacgattaagtgagtgatgattagtcaa 10573851  T
Q  466 ttacatatataatatatc 483  Q
    ||||||||| ||||||||    
T  10573850 ttacatatacaatatatc 10573833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 44157042 - 44156937
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||| |||||||||||||||    
T  44157042 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacgattaaaagagtgatgattagtcaat 44156943  T
Q  467 tacata 472  Q
    ||||||    
T  44156942 tacata 44156937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 372 - 484
Target Start/End: Complemental strand, 1005952 - 1005840
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  1005952 tatattaacaaacaaaataaaccagtcataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 1005853  T
Q  472 atataatatatcc 484  Q
    | | |||||||||    
T  1005852 acacaatatatcc 1005840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 35996976 - 35996856
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| |||||    
T  35996976 gcaaatatattaacaaacaaaagaaaccagtcatagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaat 35996877  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||  | ||||||||||||    
T  35996876 tacatgcacaatatatcccaa 35996856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 3564279 - 3564165
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| |||||||||||||||| |||    
T  3564279 tatattaacaaacaaaagaaaccagtcataggctcgtaacacatcaacataaatataa-taatattgacgattaagagagtgatgattagtcaattgcat 3564181  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  3564180 acacaatatatcccaa 3564165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 367 - 462
Target Start/End: Original strand, 14216908 - 14217003
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 462  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  14216908 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcatatcaacataaatataaataatattgacgattaagagagtgatgattagt 14217003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 14824579 - 14824464
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || |||||||||||||||||||| || |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  14824579 tatattaacaaacaaaataaaccagtcataggctcgtaacacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 14824480  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  14824479 acacaatatatcccaa 14824464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 367 - 485
Target Start/End: Complemental strand, 5588483 - 5588365
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| || |||||| |||||| || |||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  5588483 gcaaatatattaacaaacaaaagaaatcaatcatagactcgtaacacatcaacataaatataaataatattgatgattaagagaatgatgattagtcaat 5588384  T
Q  467 tacatatataatatatccc 485  Q
    |||||| | ||||||||||    
T  5588383 tacatacacaatatatccc 5588365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 375 - 487
Target Start/End: Original strand, 45158835 - 45158947
Alignment:
Q  375 attaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatata 474  Q
    |||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| || |||||||||||||||||| |    
T  45158835 attaacaaacacaagaaatcagtcatagactcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaattacataca 45158934  T
Q  475 taatatatcccaa 487  Q
     ||||||| ||||    
T  45158935 caatatataccaa 45158947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 4562229 - 4562114
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||| ||||||||| || |||||||||||||||| |||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  4562229 tatactaacaaacaaaataaaccagtcataggcttgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 4562130  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  4562129 acacaatatatcccaa 4562114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 484
Target Start/End: Original strand, 28746339 - 28746450
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||| |||||||||||||||| || |||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  28746339 atattaacaaacaaaagaaatcagtcataggctcgtatcacatcagcataaatataaataatattgatgattaagagagtgacgattagtcaattacata 28746438  T
Q  473 tataatatatcc 484  Q
     | |||||||||    
T  28746439 cacaatatatcc 28746450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 374 - 487
Target Start/End: Complemental strand, 34146640 - 34146527
Alignment:
Q  374 tattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatat 473  Q
    |||||||||||| ||||||| |||  |||| ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||| ||     
T  34146640 tattaacaaacaaaagaaacaagtattaggatcgtagcatatcaacataaatataaataatattgacgattaagagagtgatgattagtcaattacctac 34146541  T
Q  474 ataatatatcccaa 487  Q
    | ||||||||||||    
T  34146540 acaatatatcccaa 34146527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 197 - 364
Target Start/End: Original strand, 14833150 - 14833316
Alignment:
Q  197 cttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccg 296  Q
    |||||||||| |||| |||| |||||||| ||||| |||||| ||| |  | |||||||  || ||||| ||| | ||||| |||||||||||||||| |    
T  14833150 cttgtggcacattgtgtatc-gtggatcggtatcaatttcactccttcagagtccgtccatgatcatcttcattagtttggccatttggcaggattactg 14833248  T
Q  297 cggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    ||||  |||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  14833249 cggtttactcattcttttctccaagtgatctggcacgccggctgttgggttgtttggaaggaaagaaa 14833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 24585976 - 24585861
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||| ||||||||| ||||||| ||||||| |||||||||| || ||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  24585976 tataataacaaacaaaagaaacaagtcatatgctcgtagcacataaacataaatataaataatattgacgattaagagagtgaagattagtcaattacat 24585877  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  24585876 acagaatatatcccaa 24585861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 372 - 484
Target Start/End: Original strand, 3545237 - 3545349
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||| ||| ||||||||  |||||||||||||| | |||||||||||||||| ||||||||| |||||||||| |||| |||| ||||||||||    
T  3545237 tatattaacatacaaaagaaaccgatcataggctcgtagtacatcaacataaatataaataatattgacgattaagagagtgataattaatcaattacat 3545336  T
Q  472 atataatatatcc 484  Q
    | | |||||||||    
T  3545337 acacaatatatcc 3545349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 390 - 484
Target Start/End: Complemental strand, 12206409 - 12206315
Alignment:
Q  390 aaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcc 484  Q
    |||||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||||| | |||||||||    
T  12206409 aaaccactcataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaaatacatacaaaatatatcc 12206315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 2319739 - 2319621
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||| | |||||||||||||  ||||||||||| ||| |||| ||||||| ||||||||| |||||| ||| |||||||||||||||    
T  2319739 gcaaatatattaacaaataaaagaaaccagtca--ggctcgtagcacatccacattaatataaataatattgacgattaaaagaatgatgattagtcaat 2319642  T
Q  467 tacatatataatatatcccaa 487  Q
    ||  || | ||||||||||||    
T  2319641 taattagaaaatatatcccaa 2319621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 22485254 - 22485140
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      |||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  22485254 gcaagtatattaacaaacacaagaaaccag------gctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 22485161  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  22485160 tacatacacaatatataccaa 22485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 372 - 484
Target Start/End: Complemental strand, 35342779 - 35342667
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  | ||| ||||||| |||| |||||| ||||| |||||||||| ||||||||| |||||||||| |||| ||||| |||||||||    
T  35342779 tatattaacaaacaacataaatcagtcatcggcttgtagcacatcaaaataaatataaataatattgacgattaagagattgattattagccaattacat 35342680  T
Q  472 atataatatatcc 484  Q
    | | |||||||||    
T  35342679 acacaatatatcc 35342667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 171 - 364
Target Start/End: Complemental strand, 33035459 - 33035266
Alignment:
Q  171 ttttttcattgcgacttcttcggtagcttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatc 270  Q
    |||||||||||| | || || || || |||||||| ||| | ||||||||||| | ||||| |||||| ||| |  |||| ||  | || ||||| ||||    
T  33035459 ttttttcattgcaatttttttggcagtttgtggcatcttttgtatcagtggattggtatcaatttcactccttcagaatctgtttgtgatcatcttcatc 33035360  T
Q  271 aatttggacatttggcaggattaccgcggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    | |||||  || |||| || ||||||||||  ||||||||||| |||||||||||||||||||| ||||  |||||||| ||||||||| ||||    
T  33035359 agtttggcaatatggcggggttaccgcggtttactcattctttcctccaagtgatctggcacgccggctgttgggttgtttggaaggaacgaaa 33035266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 6125158 - 6125059
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||| ||| || | ||||||||||    
T  6125158 gcaagtatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaaaagagtggtcattagtcaat 6125065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 18301560 - 18301461
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||||| || ||||||||||||| |||||||||  ||||||||| || ||||||||||||    
T  18301560 gcaaatatattaacaaacacaagaaac------tagactcgtagcacattaacataaatataaataatattgacaattaagagagtggtgattagtcaat 18301467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 20537313 - 20537214
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      ||||| || || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  20537313 gcaaatatattaacaaacacaagaaaccagac------tcgtaacacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 20537220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 21104934 - 21104820
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||| |  ||| ||||||||||||||||||  | ||||||||||| |||| ||||||||| |||||||||| |||| | ||  |||||||||    
T  21104934 tatattaacaaataacagacaccagtcataggctcgtaatacatcaacataaacataaataatattgacgattaagagagtgatta-taaccaattacat 21104836  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  21104835 acacaatatatcccaa 21104820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 4169654 - 4169753
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| |||      |||||||||| || ||||||||||||| ||||||||| |||||||||| |  | ||||||||||    
T  4169654 gcaaatatattaacaaacacaagaaatcag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtagtcattagtcaat 4169747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 5371547 - 5371448
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| ||||||| | || ||||||||||||  ||||||||| |||||||||| || ||||||||||||    
T  5371547 gcaaatatattaacaaacacaagaaac------tagactcgtagtacattaacataaatatacataatattgacgattaagagagtggtgattagtcaat 5371454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 12819787 - 12819688
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| || |||||| || ||||||||||||| ||||||||| |||||| ||| || ||||||||||||    
T  12819787 gcaaatatattaacaaacacaagaaac------tagacttgtagcagattaacataaatataaataatattgacgattaatagagtggtgattagtcaat 12819694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 40307969 - 40308068
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| |||||||||||||||||||||||| || |      ||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  40307969 gcaaggatattaacaaacacaagaaaccaggcaca------tagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 40308062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 40431689 - 40431800
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatca------acataaatataagtaatattgatgattaagagactgatgatta 460  Q
    |||| ||||||| |||||| |||||  ||||||||| ||||||||| ||||      ||||||||| || |||||||||||||||| ||| ||||| |||    
T  40431689 gcaaatatattagcaaacaaaagaagtcagtcatagactcgtagcacatcaacatcaacataaatacaaataatattgatgattaacagagtgatgctta 40431788  T
Q  461 gtcaattacata 472  Q
    ||||||||||||    
T  40431789 gtcaattacata 40431800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 9293828 - 9293709
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgat----gattaagagactgatgattagtcaatt 467  Q
    |||||||||||||| |||||| || |||||||||||||||| ||||   ||||||||| ||||||||||     | | ||||| ||||||||||||||||    
T  9293828 tatattaacaaacaaaagaaatcattcataggctcgtagcacatcagtgtaaatataaataatattgattgtcaagtgagagagtgatgattagtcaatt 9293729  T
Q  468 acatatataatatatcccaa 487  Q
    | ||  ||| ||||||||||    
T  9293728 aaatgcatattatatcccaa 9293709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 483
Target Start/End: Original strand, 33737744 - 33737807
Alignment:
Q  420 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 483  Q
    ||||||| |||||||||||||||| |||| | | |  ||||||||||||||||||| |||||||    
T  33737744 ataaatacaagtaatattgatgataaagaaagtaacaattagtcaattacatatatgatatatc 33737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 7806992 - 7807021
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  7806992 gcaagtatattaacaaacacaagaaaccag 7807021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 16562203 - 16562174
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  16562203 gcaagtatattaacaaacacaagaaaccag 16562174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 2e-41; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 373 - 487
Target Start/End: Complemental strand, 1795833 - 1795719
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||| |||||||||||||||||    
T  1795833 atattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgacgattagtcaattacata 1795734  T
Q  473 tataatatatcccaa 487  Q
    || ||||||||||||    
T  1795733 tacaatatatcccaa 1795719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 39796617 - 39796737
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||| ||||| |  |||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  39796617 gcaaatatattaacaaacacaagaaaccactcatatgtgcgtatcatatcaacataaatataagtaatattgacgattaagagagtgatgattagtcaat 39796716  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||||| ||||||||||||    
T  39796717 tacatatacaatatatcccaa 39796737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 1921228 - 1921108
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||  ||    
T  1921228 gcaaatatattaacaaacacaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtatat 1921129  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||  | ||||||||||||    
T  1921128 tacatgcaaaatatatcccaa 1921108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 483
Target Start/End: Original strand, 3934460 - 3934576
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  3934460 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcacatgaacataaatataaataatattgacgattaagagagtgatgattagtcaat 3934559  T
Q  467 tacatatataatatatc 483  Q
    |||||| | ||||||||    
T  3934560 tacatacacaatatatc 3934576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 26692084 - 26691964
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| || |||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  26692084 gcaaatatattaacaaacaaaataaaccagtcataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 26691985  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  26691984 tacatacacaatatatcccaa 26691964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 26961816 - 26961696
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| || |||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  26961816 gcaaatatattaacaaacaaaataaaccagtcataggctcgtaccacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 26961717  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  26961716 tacatacacaatatatcccaa 26961696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 26716713 - 26716598
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  26716713 tatattaacaaacaaaataaaccagtcataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 26716614  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  26716613 acacaatatatcccaa 26716598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 26986453 - 26986338
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  26986453 tatattaacaaacaaaataaaccagtcataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 26986354  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  26986353 acacaatatatcccaa 26986338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 27938599 - 27938484
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||| |||||||||||||||    
T  27938599 tatattaacaaacaaaataaaccagtcataggctcgtagcatatcaacataaatataaataatagtgacgattaagagagtgataattagtcaattacat 27938500  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  27938499 acacaatatatcccaa 27938484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 372 - 482
Target Start/End: Original strand, 9728066 - 9728176
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |    
T  9728066 tatattaacaaacacaagaaatcagtcataggctcgtagaacatcaacataaatataaataatattgatgattaagagagtgatgattagtcaattacgt 9728165  T
Q  472 atataatatat 482  Q
    | | |||||||    
T  9728166 acacaatatat 9728176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 6242681 - 6242801
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||||| ||||||||| |||||||||| |||||||||||||||    
T  6242681 gcaaatatattaacaaacacaagaaaccagtcatagactcatagcacatcaacattaatataaataatattgacgattaagagagtgatgattagtcaat 6242780  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  6242781 tacatacacaatatataccaa 6242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 367 - 483
Target Start/End: Complemental strand, 21251929 - 21251813
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  21251929 gcaaatatattaataaacacaagaaaccagtcaaaggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 21251830  T
Q  467 tacatatataatatatc 483  Q
    |||||| | ||||||||    
T  21251829 tacatacacaatatatc 21251813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 41233757 - 41233642
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  41233757 tatattaacaaacaaaagaaaccagtcataggcttgtagcacatcaacataaatataaataatattgacgattaagagcgtgatgattagtcaattacat 41233658  T
Q  472 atataatatatcccaa 487  Q
    |||  |||||| ||||    
T  41233657 atacgatatataccaa 41233642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 483
Target Start/End: Complemental strand, 9654195 - 9654079
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |  ||||||| | |||||||||||||||    
T  9654195 gcaaatatattaacaaacacaagaaaccagtcataggcttgtggcatatcaacataaatataagtaatattaacaattaagaaaatgatgattagtcaat 9654096  T
Q  467 tacatatataatatatc 483  Q
    | |||| | ||||||||    
T  9654095 tgcatacacaatatatc 9654079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 30777061 - 30777181
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  30777061 gcaaatatattaacaaacaaaagaaatcagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 30777160  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  30777161 tacatacacaatatataccaa 30777181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 483
Target Start/End: Complemental strand, 25750046 - 25749935
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| || ||| ||||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||||||    
T  25750046 tatattaacaaacaaaataaatcagtcataggctcgtagcacatcaacataaatataaataatagtgacgattaagagagtgatgattagtcaattacat 25749947  T
Q  472 atataatatatc 483  Q
    | | ||||||||    
T  25749946 acacaatatatc 25749935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 42365779 - 42365894
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||| ||    
T  42365779 tatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaacagagtgatgattagtcaattagat 42365878  T
Q  472 atataatatatcccaa 487  Q
      | ||||||||||||    
T  42365879 gcacaatatatcccaa 42365894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 373 - 487
Target Start/End: Original strand, 43357439 - 43357551
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||||||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| ||| |||  ||||||||||||    
T  43357439 atattaacaaacaaaagaaaccagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtgacgat--gtcaattacata 43357536  T
Q  473 tataatatatcccaa 487  Q
     ||||||||||||||    
T  43357537 cataatatatcccaa 43357551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 18001634 - 18001749
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| ||||||||||||||||||| |||||  |||||||||||||||| |||||||||  | ||||||| ||||||||| ||||||||||    
T  18001634 tatattaacaaacaaaagaaaccagtcataggcttgtagcccatcaacataaatataaataatattgacaagtaagagagtgatgattaatcaattacat 18001733  T
Q  472 atataatatatcccaa 487  Q
    ||  ||||||||||||    
T  18001734 atccaatatatcccaa 18001749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 462
Target Start/End: Original strand, 35746067 - 35746162
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagt 462  Q
    |||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||  ||||||||| |||||||||||    
T  35746067 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatgattagt 35746162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 367 - 485
Target Start/End: Original strand, 5612124 - 5612242
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||  | ||||||||||||||| |||| ||||| |||||||||||||| | ||||||||| |||||||||| |||||||||||||||    
T  5612124 gcaaatatattaacaagtaaaagaaaccagtcatatgctcttagcacatcaacataaatatgaataatattgacgattaagagagtgatgattagtcaat 5612223  T
Q  467 tacatatataatatatccc 485  Q
    |||||| | ||||||||||    
T  5612224 tacatacacaatatatccc 5612242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 3701530 - 3701413
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| |||| |||||||||||||  ||||||||||||||||  |||||||| |||||||||| |||||||||||||||    
T  3701530 gcaaatatattaacaaacataagaaatcagttataggctcgtagcgcatcaacataaatataaaaaatattgacgattaagagagtgatgattagtcaat 3701431  T
Q  467 tacatatataatatatcc 484  Q
    |||||  | |||||||||    
T  3701430 tacatgcacaatatatcc 3701413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 367 - 468
Target Start/End: Original strand, 30284251 - 30284352
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||| || |||||||| ||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  30284251 gcaaatatattaacaagcaaaagaaaccggtcataggctcctagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 30284350  T
Q  467 ta 468  Q
    ||    
T  30284351 ta 30284352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 484
Target Start/End: Complemental strand, 27085819 - 27085698
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaa----tataagtaatattgatgattaagagactgatgattagt 462  Q
    |||| |||||||||||||| ||||||||||| |||||||||||||| |||||||||||    ||||| |||||||||||||||||| | |||| ||||||    
T  27085819 gcaaatatattaacaaacaaaagaaaccagtaataggctcgtagcacatcaacataaataattataaataatattgatgattaagaaagtgataattagt 27085720  T
Q  463 caattacatatataatatatcc 484  Q
    |||||||||| | |||||||||    
T  27085719 caattacatacacaatatatcc 27085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 7629486 - 7629371
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||| |||| |||||| || ||||||||||||| || |||||||||||||||| ||||||||  |||||||||| ||||||||||||||| ||||    
T  7629486 tatattaactaacaaaagaaatcattcataggctcgtaacacatcaacataaatataaataatattggcgattaagagagtgatgattagtcaatgacat 7629387  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  7629386 acacaatatatcccaa 7629371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 34032808 - 34032697
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||||| |||||||    ||||||||| |||||||||| ||||||||| ||||||||||    
T  34032808 tatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaatataaata----taatattgacgattaagagagtgatgattaatcaattacat 34032713  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  34032712 acacaatatatcccaa 34032697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 22738298 - 22738175
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatga---ttagtc 463  Q
    |||| |||||||||||||| ||||||| ||||||||||||||| || |||||||||||||||| ||||||| | |||||||||| ||||||   ||||||    
T  22738298 gcaaatatattaacaaacaaaagaaactagtcataggctcgtaacacatcaacataaatataaataatattaacgattaagagagtgatgatatttagtc 22738199  T
Q  464 aattacatatataatatatcccaa 487  Q
    | ||||||| | ||||||||||||    
T  22738198 agttacatacacaatatatcccaa 22738175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 11907747 - 11907638
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||||      ||||||||| |||||||||| || |||||||||||||||||    
T  11907747 tatattaacaaacacaagaaaccagtcgtaggctcgtagcacatcaacataaa------taatattgacgattaagagagtggtgattagtcaattacat 11907654  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||| ||||    
T  11907653 acacaatatataccaa 11907638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 39689862 - 39689976
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  39689862 gcaagtatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 39689955  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  39689956 tacatacacaatatataccaa 39689976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 401 - 488
Target Start/End: Complemental strand, 14836744 - 14836657
Alignment:
Q  401 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaat 488  Q
    |||||||||||| |||||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||||| | |||||||| ||||    
T  14836744 aggctcgtagcacatcaacataaatataaataatattgacggttaagagagtgacgattagtcaattacatacaaaatatatctcaat 14836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 30919131 - 30919032
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| ||||||||||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  30919131 gcaaggatattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 30919038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 213 - 369
Target Start/End: Complemental strand, 17205100 - 17204945
Alignment:
Q  213 tatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgcggtcaactcattctt 312  Q
    ||||||||| ||| |||||  |||||| |||| || ||| | |||||| |||| |||||| || |||||||||  ||||||| ||||| |   |||||||    
T  17205100 tatcagtggctcggtatcaccttcacatctcctcagtccattcgagaatatcttcatcaacttagacatttggtgggattactgcggttata-cattctt 17205002  T
Q  313 ttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaatagca 369  Q
    ||||| |||||||||||||||| |||| |||||||||||||||  ||| ||||||||    
T  17205001 ttctcgaagtgatctggcacgccggctgctgggttgtctggaataaaataaatagca 17204945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 5985609 - 5985708
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||| ||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  5985609 gcaaatatattaacaaacacaaaaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 5985702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 373 - 472
Target Start/End: Original strand, 26794139 - 26794232
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||||||||||||||      |||||||||| || ||||||||||||| |||||||||  ||||||||| || | ||||||||||||||||    
T  26794139 atattaacaaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacaattaagagagtgctcattagtcaattacata 26794232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 405 - 472
Target Start/End: Complemental strand, 10657400 - 10657333
Alignment:
Q  405 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    |||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||||||||    
T  10657400 tcgtagcacatgaacataaatataaataatattgacgattaagagagtggtgattagtcaattacata 10657333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 405 - 487
Target Start/End: Original strand, 17137945 - 17138026
Alignment:
Q  405 tcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||| |||||||||| ||||| ||||||||| |||||||||| |||||||||||||| || ||| | ||||||||||||    
T  17137945 tcgtagcacatcaacataa-tataaataatattgacgattaagagagtgatgattagtcaaatatatacacaatatatcccaa 17138026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 396 - 460
Target Start/End: Complemental strand, 11694530 - 11694466
Alignment:
Q  396 gtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgatta 460  Q
    ||||||||||||||||| |||||||||| ||||| ||||||| | |||||||||| |||||||||    
T  11694530 gtcataggctcgtagcacatcaacataagtataaataatattcacgattaagagagtgatgatta 11694466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 1638924 - 1639021
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||||||||||||||      |||||||||| || ||||||||||||| ||||||||| |||||||||  || | ||||||||||    
T  1638924 gcaaatatattaataaacacaagaaaccag------gctcgtagcacattaacataaatataaataatattgacgattaagag--tggtcattagtcaat 1639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 279 - 370
Target Start/End: Complemental strand, 32225690 - 32225599
Alignment:
Q  279 catttggcaggattaccgcggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaatagcaa 370  Q
    |||||||| ||||||| |  ||| ||| ||||||| ||||| |||||||||||||| |||| ||||||||||||  |||||||||| |||||    
T  32225690 catttggcgggattactgtagtctacttattctttcctccacgtgatctggcacgcaggctgctgggttgtctgacaggaaagaaacagcaa 32225599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 15066594 - 15066538
Alignment:
Q  431 taatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||| |||||||||| | ||||||||||||||||||| | ||||||||||||    
T  15066594 taatattgacgattaagagagtaatgattagtcaattacatacacaatatatcccaa 15066538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 5722395 - 5722324
Alignment:
Q  416 caacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    |||||||||||||| | ||| ||| |||||||||| |||||||||||| |||||||| | ||||||| ||||    
T  5722395 caacataaatataaattatactgacgattaagagaatgatgattagtcgattacatacacaatatataccaa 5722324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 9793279 - 9793184
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  9793279 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 9793190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 420 - 482
Target Start/End: Complemental strand, 12190707 - 12190645
Alignment:
Q  420 ataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 482  Q
    ||||||||||||||||||||| || |||| |  ||  ||||||||||||||||||| ||||||    
T  12190707 ataaatataagtaatattgataataaagaaagcgacaattagtcaattacatatatgatatat 12190645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Complemental strand, 7977632 - 7977603
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  7977632 gcaagtatattaacaaacacaagaaaccag 7977603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 10154358 - 10154313
Alignment:
Q  420 ataaatataagtaatattgatgattaagagactgatgattagtcaa 465  Q
    |||||||||||||||||||||||| |||| | |||| |||||||||    
T  10154358 ataaatataagtaatattgatgataaagaaagtgataattagtcaa 10154313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 9e-38; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 32018563 - 32018443
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  32018563 gcaaatatattaacaaacacaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 32018464  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  32018463 tacatacacaatatataccaa 32018443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 27084414 - 27084299
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||| |||||||||  ||||||||| ||||| ||||||||||||||    
T  27084414 tatattaacaaacaaaagaaaccagccataggctcgtagcacatcaacataaatataaataatattgacaattaagagagtgatggttagtcaattacat 27084315  T
Q  472 atataatatatcccaa 487  Q
    | | ||||||||||||    
T  27084314 acacaatatatcccaa 27084299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 367 - 484
Target Start/End: Original strand, 13045033 - 13045150
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||| ||||    
T  13045033 gcaaatatattaacaaacaaaagaaacaaatcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagccaat 13045132  T
Q  467 tacatatataatatatcc 484  Q
    |||||| | |||||||||    
T  13045133 tacatacacaatatatcc 13045150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 192 - 364
Target Start/End: Complemental strand, 3025259 - 3025087
Alignment:
Q  192 ggtagcttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggat 291  Q
    |||||||| ||||| ||||||||||||||||| | ||||| ||| | | ||||  | |||||| | |||||| | ||||||||||| |||||||| ||||    
T  3025259 ggtagcttatggcatcttgtttatcagtggattggtatcaattttatatctccggagtccgtcagtgaacatattcatcaatttgggcatttggcgggat 3025160  T
Q  292 taccgcggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    |||||||||  |||||||||||||| ||||||||||||||||| |||| ||||||  | ||||||||||||||    
T  3025159 taccgcggtttactcattcttttcttcaagtgatctggcacgcaggctactgggtcatttggaaggaaagaaa 3025087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 13061026 - 13061146
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||| ||||| ||||||| ||| ||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||||    
T  13061026 gcaaatatattaataaacaaaagaaacaagtgataggcttgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaat 13061125  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  13061126 tacatacacaatatatcccaa 13061146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 372 - 487
Target Start/End: Complemental strand, 11105749 - 11105634
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    ||||||||||||||  ||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||||||| || | ||||| |||||||||    
T  11105749 tatattaacaaacaacagaaaccagtcgtaggctcgtagcacatcaacataaatataaataatattgacgattaagagagtggttattagccaattacat 11105650  T
Q  472 atataatatatcccaa 487  Q
    | ||||||||||||||    
T  11105649 acataatatatcccaa 11105634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 234754 - 234645
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||    
T  234754 atattaacaaacaaaagaaactagtcatagactcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattagtcaactacata 234655  T
Q  473 tataatatat 482  Q
     | |||||||    
T  234654 cacaatatat 234645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 3213036 - 3212916
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| || ||| |||||||||||||||| || |||||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  3213036 gcaaatatattaacaaacaaaataaatcagtcataggctcgtaacacatcaacataaatataaataatattgacgattaagagagtggtgattagtcaat 3212937  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  3212936 tacatacacaatatataccaa 3212916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 7255385 - 7255282
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||| ||||||||| |||||||| ||||||| ||||||||| |||||||||| |||||||||||||||    
T  7255385 gcaaatatattaacaaacaaaagaaatcagtcatagactcgtagcacatcaacattaatataaataatattgacgattaagagagtgatgattagtcaat 7255286  T
Q  467 taca 470  Q
    ||||    
T  7255285 taca 7255282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 13607428 - 13607552
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataa----atataagtaatattgatgattaagagactgatgattagt 462  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||  |||||||||    ||||||  ||||||||||||||||||| |||||||||||    
T  13607428 gcaaatatattaacaaacaaaagaaaccagtcataggctcgtaacacttcaacataagtatatataaacaatattgatgattaagagagtgatgattagt 13607527  T
Q  463 caattacatatataatatatcccaa 487  Q
    |||||||||| | ||||||||||||    
T  13607528 caattacatacacaatatatcccaa 13607552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 367 - 487
Target Start/End: Complemental strand, 3299504 - 3299384
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||| |||||| ||||||||||||| || |||||||| ||||||| ||| ||| | |||||||||| | |||||||||||||    
T  3299504 gcaaatatattaacaaacacaataaaccaatcataggctcgtaccacatcaacatgaatataaataacattaacgattaagagagtaatgattagtcaat 3299405  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||||||||    
T  3299404 tacatacacaatatatcccaa 3299384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 373 - 484
Target Start/End: Complemental strand, 19128593 - 19128482
Alignment:
Q  373 atattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||||| |||||| | |||||||||||||| || |||||||||||||||| |||| |||| |||||||||| ||| |||||||||||||||||    
T  19128593 atattaacaaacaaaagaaatcggtcataggctcgtaacacatcaacataaatataaataatgttgacgattaagagagtgacgattagtcaattacata 19128494  T
Q  473 tataatatatcc 484  Q
     | |||||||||    
T  19128493 cacaatatatcc 19128482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 394 - 487
Target Start/End: Original strand, 6707718 - 6707811
Alignment:
Q  394 cagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatcccaa 487  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||| ||||||||| ||||||||||| | |||| |||||||    
T  6707718 cagtcataggctcgtagcacatcaacataaatataaataatattgacgattaagagagtgatgattaatcaattacatacacaatacatcccaa 6707811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 367 - 469
Target Start/End: Original strand, 4153213 - 4153315
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||| ||||||||||||| ||||| |||||||||||||||| ||||||| | |||||||||| ||||||| | |||||    
T  4153213 gcaaatatattaacaaacaaaagaaatcagtcataggctcatagcacatcaacataaatataaataatattaacgattaagagagtgatgatcactcaat 4153312  T
Q  467 tac 469  Q
    |||    
T  4153313 tac 4153315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 483
Target Start/End: Original strand, 10894196 - 10894286
Alignment:
Q  394 cagtcataggctcgtagcatatcaacataaatataag-taatattgatgattaagagactgatgattagtcaattacatatataatatatc 483  Q
    |||||||||||||| |||| |||| |||||||||||  ||||||||| |||||||||| ||||||||||||||||||||| | ||||||||    
T  10894196 cagtcataggctcgaagcacatcagcataaatataaaataatattgacgattaagagagtgatgattagtcaattacatacacaatatatc 10894286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 367 - 487
Target Start/End: Original strand, 7187910 - 7188024
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||||||| |||||||||||||||||||||      |||||||||| || || |||||||||| ||||||||| |||||||||| |||| |||||| |||    
T  7187910 gcaagtattttaacaaacacaagaaaccag------gctcgtagcacattaatataaatataaataatattgacgattaagagagtgatcattagttaat 7188003  T
Q  467 tacatatataatatatcccaa 487  Q
    |||||| | ||||||| ||||    
T  7188004 tacatacacaatatataccaa 7188024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 483
Target Start/End: Complemental strand, 26327735 - 26327646
Alignment:
Q  394 cagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatatc 483  Q
    ||||||||||||||||||| |||||||| ||||||| ||||  ||| |||||||||| ||||||||||||| ||||||| | ||||||||    
T  26327735 cagtcataggctcgtagcacatcaacattaatataaataattatgacgattaagagagtgatgattagtcagttacatagacaatatatc 26327646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 8357866 - 8357767
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||||| |      |||||||| || ||||||||||||| ||||||||| |||||||||| || | ||||||||||    
T  8357866 gcaaatatattaacaaacacaagaaaccagac------tcgtagcacattaacataaatataaataatattgacgattaagagagtggtcattagtcaat 8357773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 32130191 - 32130290
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| |||||||||||||| |||||||      ||| ||||||||| || ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  32130191 gcaaatatattaacaaacataagaaac------tagactcgtagcacattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 32130284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 367 - 406
Target Start/End: Original strand, 22988794 - 22988833
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctc 406  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  22988794 gcaaatatattaacaaacacaagaaaccagtcataggctc 22988833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 367 - 406
Target Start/End: Complemental strand, 23799602 - 23799563
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctc 406  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  23799602 gcaaatatattaacaaacacaagaaaccagtcataggctc 23799563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 1035948 - 1036043
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||      || ||||||||| || || |||||||    ||||||||| |||||||||| || | ||||||||||    
T  1035948 gcaagtatattaacaaacacaagaaacc------agactcgtagcacattaatataaata----taatattgacgattaagagagtggtcattagtcaat 1036037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 367 - 396
Target Start/End: Original strand, 31187088 - 31187117
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccag 396  Q
    ||||||||||||||||||||||||||||||    
T  31187088 gcaagtatattaacaaacacaagaaaccag 31187117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1951 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold1951
Description:

Target: scaffold1951; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 907 - 741
Alignment:
Q  198 ttgtggcaccttgtttatcagtggatcgatatcattttcacacctccccaatccgtccgagaacatctccatcaatttggacatttggcaggattaccgc 297  Q
    |||||||| ||||| ||||||||||||| ||||| |||||| ||| |  ||| ||||||||| ||||| ||||| ||||  |||||| |  |  |||| |    
T  907 ttgtggcatcttgtgtatcagtggatcggtatcaatttcactccttcagaattcgtccgagatcatcttcatcagtttgatcatttgacgagtgtaccac 808  T
Q  298 ggtcaactcattcttttctccaagtgatctggcacgctggcttctgggttgtctggaaggaaagaaa 364  Q
    |||  |||||||||||||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  807 ggtttactcattcttttctccaagtgatctggcacgccggctgttgggttgtttggaaggaaagaaa 741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 62; Significance: 2e-26; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 372 - 487
Target Start/End: Original strand, 202439 - 202547
Alignment:
Q  372 tatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacat 471  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||| ||||||||| ||||||       ||||||||||||||||||    
T  202439 tatattaacaaacaaaagaaatcagtcataggctcgtagcacatcaacataaatataaataatattgacgattaa-------atgattagtcaattacat 202531  T
Q  472 atataatatatcccaa 487  Q
    ||| | ||||||||||    
T  202532 atacagtatatcccaa 202547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 43737 - 43836
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||||||||||||||||||||||||||||      |||||||||| || || |||||||||| ||||||||| |||||||||| || | ||||||||||    
T  43737 gcaagtatattaacaaacacaagaaaccag------gctcgtagcacattaatataaatataaataatattgacgattaagagagtggtcattagtcaat 43830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 367 - 472
Target Start/End: Complemental strand, 6114 - 6015
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    |||| ||||||||||||||||||||||      ||| |||||| ||||| ||||||||||||| ||||||||| |||||||||| || ||||||||||||    
T  6114 gcaaatatattaacaaacacaagaaac------tagactcgtatcatattaacataaatataaataatattgacgattaagagagtggtgattagtcaat 6021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 367 - 472
Target Start/End: Original strand, 29776 - 29875
Alignment:
Q  367 gcaagtatattaacaaacacaagaaaccagtcataggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaat 466  Q
    ||||| |||||||||||||||||||| |||      |||||||||| || ||||||||||||| ||||||| | |||||||||| || | ||||||||||    
T  29776 gcaaggatattaacaaacacaagaaaacag------gctcgtagcacattaacataaatataaataatattaacgattaagagagtggtcattagtcaat 29869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 482
Target Start/End: Complemental strand, 13810 - 13729
Alignment:
Q  401 aggctcgtagcatatcaacataaatataagtaatattgatgattaagagactgatgattagtcaattacatatataatatat 482  Q
    |||||| ||||| || ||||| ||||||| ||||  ||| |||||||||| ||||||||||||||| ||||| | |||||||    
T  13810 aggctcatagcacataaacattaatataaataattatgacgattaagagagtgatgattagtcaatgacatacacaatatat 13729  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 419 - 472
Target Start/End: Original strand, 41276 - 41329
Alignment:
Q  419 cataaatataagtaatattgatgattaagagactgatgattagtcaattacata 472  Q
    ||||||||||| ||||||| | |||||||||| || | ||||||||||||||||    
T  41276 cataaatataaataatattaacgattaagagagtggtcattagtcaattacata 41329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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