View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4167_high_5 (Length: 509)
Name: NF4167_high_5
Description: NF4167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4167_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 468; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 1 - 503
Target Start/End: Complemental strand, 30694520 - 30694011
Alignment:
| Q |
1 |
ataatttgtctgttttgcctttgggtttgatatttgtttcataatgctgcttatatgtaacaaaaggaatactaacaatatactttcaaatacatttatt |
100 |
Q |
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| T |
30694520 |
ataatttgtctgttttgcctttgggtttgatatttgtttcataatgctgcttatatgtaacaaaaggaatactaacaatatactttcaaatacatttatt |
30694421 |
T |
|
| Q |
101 |
cagtgatgactcttttatctggtgaaatttatgtgagctatacaaaatcacatagatttcactctccattttgtaggagttggatttcacatcaagagta |
200 |
Q |
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| T |
30694420 |
cagtgatgactcttttatctggtgaaatttatgtgagctatacaaaatcacatagatttcactctccattttgtaggagttggatttcacatcaagagta |
30694321 |
T |
|
| Q |
201 |
tatcgttagcatttttctttataatgatccttttttaacttctatctggcttatatattaataaaatgttcacgcagtttacacattttgcaaatctgaa |
300 |
Q |
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| T |
30694320 |
tatcgttggcatttttctttataatgatccttttttaacttctatctggcttatatattaataaaattttcatgcagtttacacattttgcaaatctgaa |
30694221 |
T |
|
| Q |
301 |
attaaccttttgatgatttgactccattgggcaacaagggaa-------ctgagaatatgctgatataaggcagtgagaatatactgataaaatgttctg |
393 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30694220 |
attaaccttttgatgatttgactccattgggcaacaagggaactgacaactgagaatatgctgatataaggcagtgagaatatactgataaaatgttctg |
30694121 |
T |
|
| Q |
394 |
tgagtgttcggaatatgctactgatacttttcagtgatgttaaagttgcagtcctttttgcacctttatagtattttatattttattaattactaatatt |
493 |
Q |
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| T |
30694120 |
tgagtgttcggaatatgctactgatacttttcagtgatgttaaagttgtagtcctttttgcacctttatagtattttatattttattaattactaatatt |
30694021 |
T |
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| Q |
494 |
aatcctatgc |
503 |
Q |
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| T |
30694020 |
aatcctatgc |
30694011 |
T |
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