View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4167_low_17 (Length: 306)
Name: NF4167_low_17
Description: NF4167
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4167_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 23691932 - 23691656
Alignment:
| Q |
19 |
agaaaccacatgatcaaataggcaaagattcatctcatataagaagtaagcttgagagcttgatacaaagnnnnnnntccttaaaattcatattggatat |
118 |
Q |
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| T |
23691932 |
agaaaccacatgatcaaataggcaaagattcatctcatataagaagtaagcttgagagcttgatacaaagaaaaaa-tccttaaaattcatattggatat |
23691834 |
T |
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| Q |
119 |
tggttatattgagctagtagagaattaacaaactaacctcttaattaacaaactaactacatacaccaaactctaactaactattatatttcttctaata |
218 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| |
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| T |
23691833 |
tggttatatagagctagtagagaattaacaaactaacctcttaattaacaaactaagtacatacaccaaactctatctaactattatatttcttctaata |
23691734 |
T |
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| Q |
219 |
aatatgaagaatttgtatttattccaccctcaaattttttacactcacttgctgagtttttgtctgttgtgttctgtg |
296 |
Q |
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|||||||||||||||||||||||||| |||||| ||||||||||| |||| ||||||||||||||||| |||| |||| |
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| T |
23691733 |
aatatgaagaatttgtatttattccaacctcaatttttttacacttactttctgagtttttgtctgttatgttttgtg |
23691656 |
T |
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