View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4168_high_10 (Length: 394)

Name: NF4168_high_10
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4168_high_10
NF4168_high_10
[»] chr4 (38 HSPs)
chr4 (163-375)||(43239356-43239568)
chr4 (1-164)||(36382370-36382532)
chr4 (1-160)||(25930692-25930851)
chr4 (2-160)||(20129294-20129452)
chr4 (1-160)||(29319729-29319888)
chr4 (2-160)||(13012172-13012330)
chr4 (2-160)||(26439304-26439462)
chr4 (2-160)||(34407309-34407467)
chr4 (1-160)||(40528997-40529158)
chr4 (2-160)||(47500757-47500915)
chr4 (1-142)||(43143608-43143749)
chr4 (1-165)||(10352908-10353072)
chr4 (1-160)||(17511257-17511416)
chr4 (1-143)||(42333800-42333942)
chr4 (2-160)||(43355888-43356046)
chr4 (1-141)||(3292920-3293060)
chr4 (1-142)||(48989330-48989471)
chr4 (1-144)||(6690259-6690402)
chr4 (3-138)||(29996009-29996144)
chr4 (1-144)||(30216766-30216909)
chr4 (1-144)||(50205101-50205244)
chr4 (1-143)||(30077655-30077797)
chr4 (1-160)||(6235516-6235663)
chr4 (1-144)||(26448053-26448195)
chr4 (1-125)||(44156670-44156794)
chr4 (1-141)||(28877274-28877414)
chr4 (1-109)||(1817752-1817860)
chr4 (1-120)||(35545977-35546096)
chr4 (18-142)||(30109958-30110084)
chr4 (44-142)||(45194178-45194276)
chr4 (18-132)||(48129978-48130087)
chr4 (1-66)||(13392905-13392970)
chr4 (1-66)||(13396044-13396109)
chr4 (59-160)||(27363345-27363446)
chr4 (51-119)||(6254569-6254637)
chr4 (103-144)||(7769328-7769369)
chr4 (107-144)||(49908782-49908819)
chr4 (107-144)||(5517494-5517531)
[»] chr7 (21 HSPs)
chr7 (1-164)||(8394105-8394268)
chr7 (5-161)||(36630799-36630955)
chr7 (1-160)||(5555471-5555630)
chr7 (1-160)||(3114120-3114279)
chr7 (1-160)||(14777131-14777290)
chr7 (1-144)||(37002168-37002311)
chr7 (1-144)||(34389080-34389223)
chr7 (1-144)||(8867755-8867898)
chr7 (1-135)||(35090177-35090311)
chr7 (1-144)||(33685564-33685707)
chr7 (1-128)||(38638260-38638387)
chr7 (1-128)||(40920027-40920154)
chr7 (1-140)||(26624749-26624889)
chr7 (1-137)||(43184492-43184628)
chr7 (1-125)||(36658200-36658324)
chr7 (1-144)||(7002725-7002868)
chr7 (1-144)||(7048596-7048739)
chr7 (18-87)||(10868514-10868585)
chr7 (69-164)||(26502790-26502885)
chr7 (69-164)||(26589829-26589924)
chr7 (99-144)||(10876829-10876874)
[»] chr5 (21 HSPs)
chr5 (1-164)||(1776400-1776563)
chr5 (1-165)||(13817956-13818120)
chr5 (1-160)||(10033911-10034070)
chr5 (1-160)||(36293645-36293804)
chr5 (2-160)||(26283343-26283501)
chr5 (1-160)||(39657530-39657689)
chr5 (1-160)||(3155655-3155814)
chr5 (1-160)||(39434680-39434839)
chr5 (1-157)||(19985926-19986082)
chr5 (1-125)||(16155016-16155140)
chr5 (1-144)||(37254641-37254784)
chr5 (1-144)||(17332575-17332718)
chr5 (1-114)||(16333900-16334013)
chr5 (1-144)||(12278884-12279027)
chr5 (1-144)||(31680367-31680510)
chr5 (1-144)||(31501740-31501883)
chr5 (1-130)||(33430335-33430464)
chr5 (1-127)||(43068894-43069020)
chr5 (1-142)||(36291373-36291514)
chr5 (18-131)||(28801300-28801415)
chr5 (108-160)||(14316642-14316694)
[»] chr3 (19 HSPs)
chr3 (1-164)||(34084146-34084309)
chr3 (1-157)||(19390133-19390289)
chr3 (1-160)||(6269450-6269609)
chr3 (1-160)||(22968468-22968627)
chr3 (2-160)||(39771774-39771932)
chr3 (1-144)||(11018236-11018379)
chr3 (1-144)||(19565525-19565668)
chr3 (1-144)||(45182981-45183124)
chr3 (1-144)||(6930918-6931061)
chr3 (1-144)||(45335875-45336017)
chr3 (6-160)||(40081769-40081921)
chr3 (1-145)||(27935177-27935321)
chr3 (1-144)||(6503593-6503736)
chr3 (1-144)||(33040953-33041096)
chr3 (2-144)||(35514266-35514404)
chr3 (84-162)||(22922139-22922217)
chr3 (18-128)||(5135285-5135397)
chr3 (107-144)||(6890998-6891035)
chr3 (96-144)||(5354709-5354757)
[»] chr8 (14 HSPs)
chr8 (1-162)||(15838268-15838428)
chr8 (1-160)||(29728410-29728569)
chr8 (1-160)||(3648818-3648977)
chr8 (1-151)||(34136849-34136999)
chr8 (2-158)||(39914501-39914656)
chr8 (1-140)||(16788049-16788188)
chr8 (1-144)||(4404008-4404151)
chr8 (1-144)||(23402108-23402251)
chr8 (1-144)||(36408551-36408694)
chr8 (1-122)||(9877242-9877363)
chr8 (1-144)||(2729220-2729363)
chr8 (18-125)||(3435288-3435397)
chr8 (1-112)||(42230971-42231080)
chr8 (51-121)||(40470567-40470637)
[»] chr2 (22 HSPs)
chr2 (1-160)||(42439970-42440129)
chr2 (1-160)||(18981601-18981759)
chr2 (1-160)||(35962699-35962858)
chr2 (1-160)||(41251658-41251817)
chr2 (2-160)||(6403829-6403987)
chr2 (7-160)||(2958131-2958283)
chr2 (1-160)||(32127165-32127324)
chr2 (1-164)||(31581646-31581809)
chr2 (1-160)||(17445065-17445222)
chr2 (1-160)||(16405584-16405743)
chr2 (1-138)||(771005-771142)
chr2 (1-160)||(2285846-2286005)
chr2 (1-144)||(44084627-44084770)
chr2 (1-144)||(45418583-45418726)
chr2 (1-144)||(8147351-8147495)
chr2 (1-125)||(12756861-12756985)
chr2 (1-142)||(8059357-8059498)
chr2 (15-125)||(26162737-26162847)
chr2 (36-144)||(26237957-26238065)
chr2 (18-120)||(4555250-4555354)
chr2 (18-135)||(7072589-7072710)
chr2 (69-124)||(34905969-34906024)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-160)||(17826-17985)
[»] chr6 (11 HSPs)
chr6 (1-160)||(34948782-34948941)
chr6 (1-160)||(13837805-13837964)
chr6 (2-160)||(398601-398759)
chr6 (1-144)||(28996730-28996873)
chr6 (1-138)||(29743289-29743426)
chr6 (1-144)||(18339106-18339249)
chr6 (1-125)||(33229360-33229484)
chr6 (48-144)||(31028435-31028531)
chr6 (59-164)||(24697899-24698004)
chr6 (108-144)||(13647017-13647053)
chr6 (69-125)||(3050098-3050154)
[»] chr1 (13 HSPs)
chr1 (1-160)||(42310965-42311124)
chr1 (2-160)||(26144239-26144397)
chr1 (1-157)||(32982080-32982236)
chr1 (1-160)||(7433429-7433588)
chr1 (1-136)||(321401-321536)
chr1 (1-140)||(3828988-3829126)
chr1 (1-144)||(17445313-17445456)
chr1 (1-144)||(35907552-35907695)
chr1 (38-160)||(23313222-23313345)
chr1 (18-160)||(41972314-41972457)
chr1 (18-144)||(33489687-33489815)
chr1 (96-129)||(35951464-35951497)
chr1 (108-144)||(44352614-44352650)
[»] scaffold0002 (1 HSPs)
scaffold0002 (2-160)||(480482-480640)
[»] scaffold2142 (1 HSPs)
scaffold2142 (2-160)||(506-664)
[»] scaffold0502 (1 HSPs)
scaffold0502 (1-144)||(5230-5373)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-128)||(52941-53068)
[»] scaffold0154 (1 HSPs)
scaffold0154 (2-144)||(31480-31622)


Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 163 - 375
Target Start/End: Complemental strand, 43239568 - 43239356
Alignment:
Q  163 tgtctctagatatcagtcccatgatttagtccataccatcgtaatattttatgtttttgtccatcccttgcatagaattttttgcaatattaaagattgt 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43239568 tgtctctagatatcagtcccatgatttagtccataccatcgtaatattttatgtttttgtccatcccttgcatagaattttttgcaatattaaagattgt 43239469  T
Q  263 gacgtgatcatgtggcctcaatttctgcaatataaaattttggacaaagaatttaataatgaaaaactgaccgtaaacaaatcccatgaggtctctatat 362  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43239468 gacgtgatcatgtggcctcaatttctgcaatataaaattttggacaaagaatttaataatgaaaaactgaccgtaaacaaatcccatgaggtctctatat 43239369  T
Q  363 cgaatgaacctac 375  Q
    |||||||||||||    
T  43239368 cgaatgaacctac 43239356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 36382370 - 36382532
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36382370 taaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaatggactttttggttgagtttaatg 36382468  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  36382469 tgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgccactg 36382532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 25930851 - 25930692
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  25930851 taaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtttaatg 25930752  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  25930751 tgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcc 25930692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 20129452 - 20129294
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  20129452 aaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatgt 20129353  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  20129352 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 20129294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29319729 - 29319888
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||| |||||||| |||||    
T  29319729 taaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgggattttgggttgagtctaatg 29319828  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  29319829 tgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcc 29319888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 13012330 - 13012172
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||| | ||||||    
T  13012330 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttgaatctaatgt 13012231  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  13012230 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 13012172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 26439304 - 26439462
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||    
T  26439304 aaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttgagtctaatgt 26439403  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  26439404 gcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 26439462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 34407309 - 34407467
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||    
T  34407309 aaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttgagtctaatgt 34407408  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  34407409 gcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 34407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 40529158 - 40528997
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||   |||| ||||||||||||||    
T  40529158 taaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatgagtttttaggttgagtttaatg 40529059  T
Q  101 tgcaaaaattatcgatcgagcccggacgac--cgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||| |||||||||  ||||| ||||||||||||||||||||||||    
T  40529058 tgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgcc 40528997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 47500915 - 47500757
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||  |||||||||||||| ||||||    
T  47500915 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaatgagctttttggttgagtctaatgt 47500816  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  47500815 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 47500757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 43143608 - 43143749
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||    
T  43143608 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatg 43143707  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  43143708 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcg 43143749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10352908 - 10353072
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  10352908 taaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgggtctaatg 10353007  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactgt 165  Q
    |||||||||||||||| |||||||| |||||||| |||||||||  |||||  ||||||| ||||    
T  10353008 tgcaaaaattatcgattgagcccgggcgaccgccaggggtcgccggacggtgaaaccgcccctgt 10353072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17511257 - 17511416
Alignment:
Q  1 taaataaaatt-ccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaat 99  Q
    ||||||||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||    
T  17511257 taaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaat 17511356  T
Q  100 gtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||| | || |||||| || ||||||||||||||||||||||||    
T  17511357 gtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaaccgcc 17511416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 42333800 - 42333942
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||    
T  42333800 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatg 42333899  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 143  Q
    |||||||||||||||| ||||||||||||||||||||| ||||    
T  42333900 tgcaaaaattatcgattgagcccggacgaccgcccgggatcgc 42333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 43356046 - 43355888
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||    
T  43356046 aaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttgagtctaatgt 43355947  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||| ||||||||| |||| ||| |||||||| | ||||| ||||||||    
T  43355946 gcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcc 43355888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 3292920 - 3293060
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  3292920 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 3293019  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtc 141  Q
     |||||||||||||||||||||||| |||||||||||||||    
T  3293020 ggcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 48989471 - 48989330
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||||||    
T  48989471 taaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatggacttttgagttgggtttaatg 48989372  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 142  Q
    ||||||||||||||||||| |||||  |||||||||| ||||    
T  48989371 tgcaaaaattatcgatcgaacccggttgaccgcccggagtcg 48989330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6690259 - 6690402
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  6690259 taaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 6690358  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     |||||||||||||||||||||||| ||||||||||||||||||    
T  6690359 cgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 6690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 3 - 138
Target Start/End: Original strand, 29996009 - 29996144
Alignment:
Q  3 aataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtg 102  Q
    ||||||||||| ||| |||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||     
T  29996009 aataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaatggactttttggttgagtctaatgta 29996108  T
Q  103 caaaaattatcgatcgagcccggacgaccgcccggg 138  Q
    |||||||||||||||||| ||||||||||| |||||    
T  29996109 caaaaattatcgatcgagtccggacgaccgtccggg 29996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 30216766 - 30216909
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| ||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||   ||||| ||||| || |||||    
T  30216766 taaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttgggtctaatg 30216865  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  30216866 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 30216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 50205101 - 50205244
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||| | ||||| |||||  | |||||    
T  50205101 taaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaattggcttttgggttggatctaatg 50205200  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||| ||| |||||||||||| |||||    
T  50205201 tgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgcc 50205244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 30077655 - 30077797
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| ||||||||||||| |||| | ||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||||    
T  30077655 taaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaatgaactttttggttgggtctaatg 30077754  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgc 143  Q
    ||||||| |||||||| ||||| || |||||||||| ||||||    
T  30077755 tgcaaaatttatcgattgagcctgggcgaccgcccgaggtcgc 30077797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 6235663 - 6235516
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |            |    
T  6235663 taaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggacttttgg------------g 6235576  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||| |||||||||  ||||||||| |  |||||||||||||||||||||    
T  6235575 tgcaaaaattatcggtcgagcccgagcgaccgcccagaatcgccatacggtagaaccgcc 6235516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 26448195 - 26448053
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| | ||||||||| || ||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||   |||||||    
T  26448195 taaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaaattttt-tttttgtaagtgtgttaatggacttttgggttagatttaatg 26448097  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||| |||||||| ||| ||| ||||||    
T  26448096 tgcaaaaattatcgatcgagtccggacgatcgcacggagtcgcc 26448053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 44156794 - 44156670
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| ||||||||||||||| || ||||||||||||| ||||| |||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  44156794 taaataaaattccgagacctatttgcgtgagagaattttcagattgtccaaaattttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 44156695  T
Q  101 tgcaaaaattatcgatcgagcccgg 125  Q
    |||||||||||||| | ||||||||    
T  44156694 tgcaaaaattatcggttgagcccgg 44156670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 28877274 - 28877414
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||| ||||||||||||||||| |||  ||||||||   ||||| |||||| | |||||    
T  28877274 taaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaaatttttctttttataagcgtgttaattagcttttaggttgaatctaatg 28877373  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtc 141  Q
    ||||||||||||||||| |||||   ||||||| |||||||    
T  28877374 tgcaaaaattatcgatctagcccaagcgaccgcacggggtc 28877414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 1817860 - 1817752
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||| | |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| | |||  | |||||    
T  1817860 taaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaaatttttctttttataaatgtattaatggacttttggattggatctaatg 1817761  T
Q  101 tgcaaaaat 109  Q
    |||||||||    
T  1817760 tgcaaaaat 1817752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35546096 - 35545977
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  ||||| |||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| ||||| || | |||    
T  35546096 taaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttgggttgggtctgatg 35545997  T
Q  101 tgcaaaaattatcgatcgag 120  Q
     ||||||||| |||||||||    
T  35545996 cgcaaaaattgtcgatcgag 35545977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 18 - 142
Target Start/End: Complemental strand, 30110084 - 30109958
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||||||||||| | |||||| |||  | |||||||||||||||||||| ||||||||||| ||||  | ||| || ||||||||||||||||||||    
T  30110084 cctatttgcgtgtgagatttttcatattttgtccaaatttttctttttgtaagtgtgttaatggtctttgggtttgggtctaatgtgcaaaaattatcga 30109985  T
Q  116 tcgagcccggacgaccgcccggggtcg 142  Q
    ||||| |||| |||||| |||||||||    
T  30109984 tcgagtccgggcgaccgtccggggtcg 30109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 45194276 - 45194178
Alignment:
Q  44 ttgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 142  Q
    ||||||||  |||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| | | |||| |||||||    
T  45194276 ttgcccaatattttttttttgtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcg 45194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 48130087 - 48129978
Alignment:
Q  18 cctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatc 117  Q
    ||||||||||||||| | ||||||     ||||||||||||||||||||| ||||||||||  ||||| ||||| || |||| |||||||||||||||||    
T  48130087 cctatttgcgtgtgagagttttca-----cccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatc 48129993  T
Q  118 gagcccggacgaccg 132  Q
    |||||||| ||||||    
T  48129992 gagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13392905 - 13392970
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgta 66  Q
    ||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  13392905 taaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13392970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 13396044 - 13396109
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgta 66  Q
    ||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  13396044 taaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgta 13396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 160
Target Start/End: Complemental strand, 27363446 - 27363345
Alignment:
Q  59 tttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 158  Q
    ||||||||| ||||||||||| ||||| ||||| |  |||| ||||||||   |||||||||||||| |||||||||| ||||||||||||||| |||||    
T  27363446 tttttgtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccg 27363347  T
Q  159 cc 160  Q
    ||    
T  27363346 cc 27363345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 6254637 - 6254569
Alignment:
Q  51 aatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcga 119  Q
    ||||||| |||||| || ||||||||| | ||||| ||||| |||||||||||||||||||||||||||    
T  6254637 aatttttttttttgcaagtgtgttaattgtcttttgggttgggtttaatgtgcaaaaattatcgatcga 6254569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 7769369 - 7769328
Alignment:
Q  103 caaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||| |||||||| |||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 7769328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 49908782 - 49908819
Alignment:
Q  107 aattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgcc 49908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 5517494 - 5517531
Alignment:
Q  107 aattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  5517494 aattatcgatcgagcccaggcgaccgcccggggtcgcc 5517531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 8394268 - 8394105
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8394268 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaatggactttttggttgagtttaatg 8394169  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8394168 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgccactg 8394105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 5 - 161
Target Start/End: Complemental strand, 36630955 - 36630799
Alignment:
Q  5 taaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgca 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36630955 taaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgca 36630856  T
Q  105 aaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcca 161  Q
    ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  36630855 aaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaaccgcca 36630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5555630 - 5555471
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||| |||||    
T  5555630 taaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgggcttttgggttgagtctaatg 5555531  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5555530 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 5555471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 3114120 - 3114279
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  3114120 taaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 3114219  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  3114220 tgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcc 3114279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 14777131 - 14777290
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||    
T  14777131 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttgagtctaatg 14777230  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||||||    
T  14777231 tgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcc 14777290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 37002168 - 37002311
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||| || |||||    
T  37002168 taaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttggattgggtctaatg 37002267  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  37002268 tgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgcc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34389080 - 34389223
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||   ||||| ||||| || |||||    
T  34389080 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattagcttttgggttgggtctaatg 34389179  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  34389180 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 34389223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 8867755 - 8867898
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||| | ||||| | ||| || ||||     
T  8867755 taaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaattggcttttggattgggtctaata 8867854  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  8867855 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35090311 - 35090177
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  35090311 taaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 35090212  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgccc 135  Q
    |||||||||||| |||||||||||| |||||||||    
T  35090211 tgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33685707 - 33685564
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||   |||| ||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||    
T  33685707 taaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggcttttgggttgggtttaatg 33685608  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||  |||| ||| |||||||||    
T  33685607 tgcaaaaattatcgatcgagcccgagcgactgcctggggtcgcc 33685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 38638260 - 38638387
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||  | |||||    
T  38638260 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttggatctaatg 38638359  T
Q  101 tgcaaaaattatcgatcgagcccggacg 128  Q
    ||||||||||||| ||||||| ||||||    
T  38638360 tgcaaaaattatcaatcgagctcggacg 38638387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 40920027 - 40920154
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||| | | |||||    
T  40920027 taaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggttaaatctaatg 40920126  T
Q  101 tgcaaaaattatcgatcgagcccggacg 128  Q
    ||||||||||||||||||||||||||||    
T  40920127 tgcaaaaattatcgatcgagcccggacg 40920154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 26624889 - 26624749
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||  |||||| | ||| || ||||     
T  26624889 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattaacttttggattgggtctaata 26624790  T
Q  101 tgcaaaaattatcg-atcgagcccggacgaccgcccggggt 140  Q
    |||||||||||||| ||||||||| | ||||||||||||||    
T  26624789 tgcaaaaattatcgaatcgagcccaggcgaccgcccggggt 26624749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 43184492 - 43184628
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| | ||||||| | ||||| |||| ||| | |||    
T  43184492 taaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaattggcttttgggttaagtctgatg 43184591  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccgg 137  Q
     | |||||||||||||||||||||  |||||||||||    
T  43184592 cgtaaaaattatcgatcgagcccgagcgaccgcccgg 43184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 36658324 - 36658200
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | | ||||||| | ||||| ||||| ||  ||||    
T  36658324 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttatttttgttagtatgttaattggcttttcggttgggtccaatg 36658225  T
Q  101 tgcaaaaattatcgatcgagcccgg 125  Q
    |||||||||||||||||||| ||||    
T  36658224 tgcaaaaattatcgatcgagtccgg 36658200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 7002868 - 7002725
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||  ||||||||||||||||| |||||| |||||| |||||||||| ||||||||  ||||||||| | ||||| ||||| || |||||    
T  7002868 taaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttgggtgtaatg 7002769  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |  ||||||  |||||||||||||| ||||||| ||||||||||    
T  7002768 tagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7002725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 7048739 - 7048596
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||  ||||||||||||||||| |||||| |||||| |||||||||| ||||||||  ||||||||| | ||||| ||||| || |||||    
T  7048739 taaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaaatttttatttttgtatgtgtgttaattggcttttgggttgggtgtaatg 7048640  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |  ||||||  |||||||||||||| ||||||| ||||||||||    
T  7048639 tagaaaaatcgtcgatcgagcccgggcgaccgctcggggtcgcc 7048596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 10868514 - 10868585
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttg 87  Q
    |||||||||| |||| ||||||||||||  |||||||||||||||||||||||||||||||||| |||||||    
T  10868514 cctatttgcgcgtgagaattttcagattttgcccaaatttttctttttgtaaatgtgttaatgggctttttg 10868585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 26502885 - 26502790
Alignment:
Q  69 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    ||||||||||| ||||| ||||| | ||||| ||||||||   |||||||||||||| |||| ||| |||||||||| ||||| ||||| ||||||    
T  26502885 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaaccaccactg 26502790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 164
Target Start/End: Original strand, 26589829 - 26589924
Alignment:
Q  69 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    ||||||||||| ||||| ||||| | ||||| ||||||||   |||||||||||||| |||| ||| |||||||||| ||||| ||||| ||||||    
T  26589829 tgtgttaatgggcttttgggttgggcttaatatgcaaaaaaattcgatcgagcccgggcgactgcctggggtcgccacacggtggaaccaccactg 26589924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 10876829 - 10876874
Alignment:
Q  99 tgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||||| ||||| | |||| |||||    
T  10876829 tgtgcaaaaattatcgatcgagcccgggcgaccacacgggttcgcc 10876874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 1776400 - 1776563
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1776400 taaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgactttaatg 1776499  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    | ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  1776500 tacaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaaccgccactg 1776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 13818120 - 13817956
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  13818120 taaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 13818021  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactgt 165  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  13818020 tgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgcccctgt 13817956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 10034070 - 10033911
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  10034070 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 10033971  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  10033970 tgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgcc 10033911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 36293645 - 36293804
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  36293645 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 36293744  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    | |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||    
T  36293745 tacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcc 36293804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 26283343 - 26283501
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  26283343 aaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttgagtctaatgt 26283442  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| |||||||||| |||||| | ||||| ||||||||    
T  26283443 gcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcc 26283501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 39657530 - 39657689
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||    
T  39657530 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttgagtctaatg 39657629  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||| |||||||||| ||||||| | ||||||||||||  |||||||||||    
T  39657630 tgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgccatatagtagaaccgcc 39657689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 3155655 - 3155814
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||  ||||    
T  3155655 taaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttgagtcgaatg 3155754  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||| |||||||||||  |||||||||||| |||||||||| ||||||||||    
T  3155755 tgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcc 3155814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 39434839 - 39434680
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||    
T  39434839 taaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaatgggcttttgggttgagtctaatg 39434740  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    || |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  39434739 tgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcc 39434680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19986082 - 19985926
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| |||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||| |||||| | |||||    
T  19986082 taaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaatggacttttgggttgaatctaatg 19985983  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 157  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||    
T  19985982 tgcaaaaattatcgatcgagctcggacgaccgcccgaggtcgtcatacggtaaaacc 19985926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16155140 - 16155016
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| |||||||| |||||    
T  16155140 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaatgggcttttgggttgagtctaatg 16155041  T
Q  101 tgcaaaaattatcgatcgagcccgg 125  Q
    |||||||||||||||||||||||||    
T  16155040 tgcaaaaattatcgatcgagcccgg 16155016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37254784 - 37254641
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| || |||||    
T  37254784 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgggtctaatg 37254685  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||||| || |||||||| |||||||||    
T  37254684 tgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgcc 37254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 17332575 - 17332718
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || ||||     
T  17332575 taaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaata 17332674  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  17332675 tgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgcc 17332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 16333900 - 16334013
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | |||||    
T  16333900 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgaatctaatg 16333999  T
Q  101 tgcaaaaattatcg 114  Q
    ||||||||||||||    
T  16334000 tgcaaaaattatcg 16334013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 12278884 - 12279027
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | | ||| ||||| || |||||    
T  12278884 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcctttgggttgggtctaatg 12278983  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||| |||| |||||||||||| |||||    
T  12278984 tgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgcc 12279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 31680510 - 31680367
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  31680510 taaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 31680411  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     | |||||||||||||||||||||| ||||||||||||||||||    
T  31680410 cggaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 31680367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31501740 - 31501883
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| | ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  31501740 taaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 31501839  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| | | ||||||||||||||    
T  31501840 tgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgcc 31501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 33430464 - 33430335
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  33430464 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 33430365  T
Q  101 tgcaaaaattatcgatcgagcccggacgac 130  Q
     |||||||||||||||||||||||| ||||    
T  33430364 cgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 43069020 - 43068894
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  43069020 taaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaatggacttttgggttgggtctaatg 43068921  T
Q  101 tgcaaaaattatcgatcgagcccggac 127  Q
    || ||||||||| ||||||||||||||    
T  43068920 tgaaaaaattattgatcgagcccggac 43068894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 36291514 - 36291373
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  ||||||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||| ||||   | |||||    
T  36291514 taaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaatgaacttttaggttagatctaatg 36291415  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 142  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  36291414 tgcaaaaattattgatcgaacccggacgaccgcccggagtcg 36291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 28801415 - 28801300
Alignment:
Q  18 cctatttgcgtgtgacaattttcagattg--cccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||||||||||| |||||||| |||   ||||||||||||||||||||| ||||||||||| ||||| | |||  | ||||||||||||||||||||    
T  28801415 cctatttgcgtgtgagaattttcatatttttcccaaatttttctttttgtaagtgtgttaatgggcttttggtttggatctaatgtgcaaaaattatcga 28801316  T
Q  116 tcgagcccggacgacc 131  Q
    ||||||| || |||||    
T  28801315 tcgagccagggcgacc 28801300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 14316694 - 14316642
Alignment:
Q  108 attatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||| || |||||||||| | |||||||||||||||||||||    
T  14316694 attatcgatcgagcctgggcgaccgcccgagatcgccatacggtagaaccgcc 14316642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 1e-75; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 34084146 - 34084309
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34084146 taaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgaatttaatg 34084245  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  34084246 tgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaaccgccactg 34084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 19390289 - 19390133
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||    
T  19390289 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatagacttttaggttgagtctaatg 19390190  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 157  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  19390189 tgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacc 19390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 6269450 - 6269609
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  6269450 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 6269549  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||    
T  6269550 tgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcc 6269609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 22968468 - 22968627
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||    
T  22968468 taaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttaagtctaatg 22968567  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22968568 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcc 22968627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 39771932 - 39771774
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||    
T  39771932 aaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgggcttttgggttgagtctaatgt 39771833  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||| ||||||||| ||||||||||||||||| | ||||| ||||||||    
T  39771832 gcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 39771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 11018236 - 11018379
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||    
T  11018236 taaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatg 11018335  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||||| || ||||||||||| ||||||    
T  11018336 tgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgcc 11018379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 19565525 - 19565668
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || |||||    
T  19565525 taaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgggtctaatg 19565624  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||| || ||||| |||||||||||| |||||    
T  19565625 tgcaaaaattatcgattgaacccgggcgaccgcccgggatcgcc 19565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45183124 - 45182981
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  45183124 taaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 45183025  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     |||||||||||||||||||||||| ||||||||||||||||||    
T  45183024 cgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6930918 - 6931061
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| | ||||| |||||  | |||||    
T  6930918 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaattggcttttgggttggatctaatg 6931017  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     |||||||||||||||||||||||| |||||| |||||||||||    
T  6931018 cgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 6931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45336017 - 45335875
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || |||||    
T  45336017 taaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaat-gactttttggttgggtctaatg 45335919  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    || ||||||||||||| ||| |||| |||||||||| |||||||    
T  45335918 tgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgcc 45335875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 6 - 160
Target Start/End: Original strand, 40081769 - 40081921
Alignment:
Q  6 aaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaa 105  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||||||| |||||| |||    
T  40081769 aaaaatccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat-gagcttttggttgagtctaatgttcaa 40081867  T
Q  106 aaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||| |||||  || | ||||||||||||||||||||||    
T  40081868 aaattatcgatcgagcccgggcgacc-tccagagtcgccatacggtagaaccgcc 40081921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 27935321 - 27935177
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||| ||||||||    
T  27935321 taaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgagcttttgggttgggtttaatg 27935222  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcca 145  Q
    ||||||||||||||||||||||||| |||| |||| |||| ||||    
T  27935221 tgcaaaaattatcgatcgagcccgggcgactgcccagggttgcca 27935177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 6503593 - 6503736
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||| ||| |||||||||||| ||||| ||||||||||||||  |||||||||||||||||| |||| |||| | ||||| |||||||| ||||     
T  6503593 taaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaattggcttttgggttgagtctaatt 6503692  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||    
T  6503693 tgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgcc 6503736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 33041096 - 33040953
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||  ||||||||||||||||||| |||||||||   ||||| ||||| || ||||     
T  33041096 taaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaattagcttttgggttgggtctaata 33040997  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||| ||||||||||  ||||||||||||||||||    
T  33040996 tgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgcc 33040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 35514404 - 35514266
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||||| ||||||||||||| |||| |||||||| |||| ||||||||||||||||||    |||||||||||||||| |||||  | || | |    
T  35514404 aaataaaattcctagacctatttgcgagtgagaattttcatattgtccaaatttttctttttgt----gtgttaatggacttttgggttggatctagtat 35514309  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    || |||||||||||||||||||||||||||| |||||||||||    
T  35514308 gcgaaaattatcgatcgagcccggacgaccgtccggggtcgcc 35514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 84 - 162
Target Start/End: Complemental strand, 22922217 - 22922139
Alignment:
Q  84 tttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccac 162  Q
    |||||||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||||||| ||||||||||    
T  22922217 tttggttgagtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgccac 22922139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 5135397 - 5135285
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    |||||||| |||||| ||||||| ||||  | |||||||||||||||||||| ||||||||||  ||||| ||||| || |||||| ||||||| |||||    
T  5135397 cctatttgtgtgtgagaattttcggattttgtccaaatttttctttttgtaagtgtgttaatgagcttttaggttgggtctaatgtacaaaaataatcga 5135298  T
Q  116 tcgagcccggacg 128  Q
    ||||||| |||||    
T  5135297 tcgagcctggacg 5135285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 6891035 - 6890998
Alignment:
Q  107 aattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||| ||||||||||| ||||||    
T  6891035 aattatcgatcgagcccgggcgaccgcccggtgtcgcc 6890998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 5354757 - 5354709
Alignment:
Q  96 taatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||  |||||||  |||||||||||| ||||||||||||||||||    
T  5354757 taatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgcc 5354709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 5e-72; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 15838428 - 15838268
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15838428 taaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttt-gtaaatgtgttaatggactttttggttgagtttaatg 15838330  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccac 162  Q
    ||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  15838329 tgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaaccgccac 15838268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 29728410 - 29728569
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||| |||||    
T  29728410 taaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgagcttttgggttgagtctaatg 29728509  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||| ||||||||||||| ||| |||||| |||||||||||||||||||||||||||    
T  29728510 tgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgcc 29728569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 3648818 - 3648977
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||    
T  3648818 taaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 3648917  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    || |||||||||||||||||||||| |||| | || || |||||||||||||||||||||    
T  3648918 tgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgcc 3648977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 34136849 - 34136999
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  34136849 taaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttgagtctaatg 34136948  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggt 151  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  34136949 tgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgccagacggt 34136999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 158
Target Start/End: Complemental strand, 39914656 - 39914501
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| | |||||||||||||| ||||||||||||||| ||||| ||||||||||||||  |||||||||||||| ||||||    
T  39914656 aaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaattttt-tttttataaatgtgttaatgagctttttggttgagtctaatgt 39914558  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 158  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||    
T  39914557 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccg 39914501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 16788049 - 16788188
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||| ||||||||| | ||||| |||||||| |||||    
T  16788049 taaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgagtctaatg 16788148  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggt 140  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  16788149 tgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4404151 - 4404008
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||| | ||||||| | ||||| |||||||| |||||    
T  4404151 taaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaattggcttttgggttgagtctaatg 4404052  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| |||||||| |||||||||    
T  4404051 tgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 4404008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 23402251 - 23402108
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| ||||| || ||||     
T  23402251 taaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaata 23402152  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  23402151 tgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 23402108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 36408694 - 36408551
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  ||||||||| |||||| | |||||||| |||||| ||| |||||||||||||||||||||||||||||||| |||||  | |||||    
T  36408694 taaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaatggacttttgggttggatctaatg 36408595  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  36408594 tgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgcc 36408551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 9877363 - 9877242
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| | |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||  || |||||    
T  9877363 taaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttaggtctaatg 9877264  T
Q  101 tgcaaaaattatcgatcgagcc 122  Q
    ||||||||||||| ||||||||    
T  9877263 tgcaaaaattatcaatcgagcc 9877242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 2729220 - 2729363
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||   |||||||||||||| ||| | |||||| |||||| |||  ||||||||| ||| ||||||||||| ||||| | |||  |||||||    
T  2729220 taaataaaattttgagacctatttgcgtatgagagttttcaaattgccaaaaaatttctttttataagtgtgttaatgggcttttggattggatttaatg 2729319  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    || |||||||||||||||||||||| || |||||||||||||||    
T  2729320 tgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgcc 2729363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 3435397 - 3435288
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||| |||||||||||  |||| ||||| || ||||||||||||||||||||    
T  3435397 cctatttgcgtttgagaattttcagattttgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgggtctaatgtgcaaaaattatcga 3435298  T
Q  116 tcgagcccgg 125  Q
    || |||||||    
T  3435297 tcaagcccgg 3435288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 42231080 - 42230971
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  |||||||||||| | ||| |||||||| |||||||||||||||||||||||||  ||||||||||||||||  ||||  |||||||    
T  42231080 taaataaaattctgagacctatttgcatatgagaattttcaaattgcccaaatttttctttttgtaa--gtgttaatggacttttgagttggatttaatg 42230983  T
Q  101 tgcaaaaattat 112  Q
    ||||||||||||    
T  42230982 tgcaaaaattat 42230971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 40470567 - 40470637
Alignment:
Q  51 aatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagc 121  Q
    ||||||| ||||| ||| |||||||||||||||||   ||| || ||||||||||||||||||||||||||    
T  40470567 aatttttttttttataagtgtgttaatggacttttgatttgggtctaatgtgcaaaaattatcgatcgagc 40470637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 8e-71; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 42440129 - 42439970
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| |||||    
T  42440129 taaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggtttagtctaatg 42440030  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42440029 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 42439970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 18981759 - 18981601
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  18981759 taaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatggacttttgggttgagtctaatg 18981660  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  18981659 tgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcc 18981601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 35962858 - 35962699
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||   ||||| |||||||| |||||    
T  35962858 taaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataagcttttgggttgagtctaatg 35962759  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  35962758 tgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcc 35962699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 41251658 - 41251817
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  41251658 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 41251757  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| ||||||||||||||| | | ||||||||||||||    
T  41251758 tgcaaaaattatcgatcgagcccgggcgaccgcccggggtcactacacggtagaaccgcc 41251817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 6403829 - 6403987
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  6403829 aaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaatgaactttttggttgagtctaatgt 6403928  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  6403929 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 6403987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 7 - 160
Target Start/End: Original strand, 2958131 - 2958283
Alignment:
Q  7 aaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||| |||||||| |||||||| ||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgc-aa 2958229  T
Q  107 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2958230 aattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 2958283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 32127165 - 32127324
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  32127165 taaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatgagcttttgggtcgagtttaatg 32127264  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  32127265 tgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcc 32127324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 31581646 - 31581809
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||     
T  31581646 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggatgagtctaata 31581745  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgccactg 164  Q
    |||||||| ||||| ||||||| || |||||||||| ||||||||||| |||||||||||||||    
T  31581746 tgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgccatacagtagaaccgccactg 31581809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 17445065 - 17445222
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||  |    
T  17445065 taaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtcta--g 17445162  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||||||||    
T  17445163 tgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcc 17445222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 16405743 - 16405584
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||| ||| |    
T  16405743 taaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatgagcttttgggttgagtctaacg 16405644  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||| |||||||| ||||||||| ||||| ||||| ||||||||||||    
T  16405643 tgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaaccgcc 16405584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 771142 - 771005
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || |||||    
T  771142 taaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgggctttttggttgggtctaatg 771043  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggg 138  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  771042 tgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 2286005 - 2285846
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||  |||||||    
T  2286005 taaataaaattccaaaacctatttgcgtgtgacaattttcagattgctcaaatttttcctttcgtaaatgtgttaatagactttttggttggatttaatg 2285906  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||| || | | ||||| ||| | ||||||| |||||||||||||    
T  2285905 tgcaaaaattatcgatcgaacctgaatgaccgtccgagatcgccatccggtagaaccgcc 2285846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 44084627 - 44084770
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| | ||| ||||||||    
T  44084627 taaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttggattgggtttaatg 44084726  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  44084727 tgcaaaaattatcgatcgagcccgggcgactgcccggggtcgcc 44084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 45418726 - 45418583
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| | ||||| |||||  | |||||    
T  45418726 taaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttgggttggatctaatg 45418627  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     |||||||||||||||||||||||| ||||||||||||||||||    
T  45418626 cgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 8147495 - 8147351
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaatttt-cagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaat 99  Q
    ||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| |||||||  |||| || ||||    
T  8147495 taaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgagttgggtctaat 8147396  T
Q  100 gtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8147395 gtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 8147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12756861 - 12756985
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| | ||||| ||||| || |||||    
T  12756861 taaataaaattccgagacttatttgcgtgtgagaattttcagattgctcaaatttttctttttgtaagtgtgttaattggcttttgggttgggtctaatg 12756960  T
Q  101 tgcaaaaattatcgatcgagcccgg 125  Q
     |||||||||||||||||| |||||    
T  12756961 cgcaaaaattatcgatcgaacccgg 12756985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 8059357 - 8059498
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| ||||| ||||| |||||| |||||||| |||| |||||||||||||||||||| ||||||||| | ||||| |||||| | |||||    
T  8059357 taaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattggcttttgggttgactctaatg 8059456  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcg 142  Q
    |||||||||||||||| ||||| || ||| || |||||||||    
T  8059457 tgcaaaaattatcgattgagcctgggcgatcggccggggtcg 8059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 26162737 - 26162847
Alignment:
Q  15 agacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcg 114  Q
    ||||||||||| || ||| |||||| ||||||||||||||||||||||||||| |||||||||||  |||| |||||| ||||||||| |||||||||||    
T  26162737 agacctatttgtgtttgagaatttttagattgcccaaatttttctttttgtaagtgtgttaatgggtttttgggttgaatttaatgtgtaaaaattatcg 26162836  T
Q  115 atcgagcccgg 125  Q
    |  ||||||||    
T  26162837 aaggagcccgg 26162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 144
Target Start/End: Complemental strand, 26238065 - 26237957
Alignment:
Q  36 ttttcagatt-gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcc 134  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||| | |||  | |||| |||||||| |||||||||||||||| ||||||||    
T  26238065 ttttcagatttgcccaaatttttctttttgtaagtgtgttaatggacttttggtttgcatctaatttgcaaaaa-tatcgatcgagcccgggcgaccgcc 26237967  T
Q  135 cggggtcgcc 144  Q
    ||||||||||    
T  26237966 cggggtcgcc 26237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 4555250 - 4555354
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||| ||||||| ||||||||||||  ||||||| |||||||||||||| |||||||| |  ||||| ||||| |||| ||||||||||||||||||    
T  4555250 cctatttacgtgtgagaattttcagattttgcccaaaattttctttttgtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcga 4555349  T
Q  116 tcgag 120  Q
    |||||    
T  4555350 tcgag 4555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 7072589 - 7072710
Alignment:
Q  18 cctatttgcgtgtgacaattttcaga--ttgcccaaatttttctttttgtaaatgtg--ttaatggactttttggttgagtttaatgtgcaaaaattatc 113  Q
    ||||||| |||| || ||||||||||  ||| ||||  |||||||||| ||| ||||  ||||||| ||||| |||||||||||||||  ||||||||||    
T  7072589 cctatttacgtgcgagaattttcagaatttgtccaatattttctttttataagtgtgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatc 7072688  T
Q  114 gatcgagcccggacgaccgccc 135  Q
    |||||||||||| |||||||||    
T  7072689 gatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 124
Target Start/End: Complemental strand, 34906024 - 34905969
Alignment:
Q  69 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccg 124  Q
    ||||||||||| ||||| ||||  | ||||||||||||||||||||||||||||||    
T  34906024 tgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgagcccg 34905969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 124; Significance: 1e-63; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 17985 - 17826
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  17985 taaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 17886  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||||||    
T  17885 tgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcc 17826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 1e-63; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 34948782 - 34948941
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  34948782 taaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 34948881  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||    
T  34948882 tgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcc 34948941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 13837964 - 13837805
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||| |||||    
T  13837964 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgtgcttttgggttgagtctaatg 13837865  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    | ||||||||||||||||| ||||  ||| ||||||||||||||||||||||||||||||    
T  13837864 tacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcc 13837805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 398759 - 398601
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  398759 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttgagtctaatgt 398660  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  398659 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 28996873 - 28996730
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| || |||||    
T  28996873 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttaggttgggtctaatg 28996774  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
     |||||||||||||||||||| ||| ||||||||||||||||||    
T  28996773 cgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgcc 28996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 29743426 - 29743289
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| || |||||    
T  29743426 taaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaatgaactttttggttgggtctaatg 29743327  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggg 138  Q
    |||||||||||||||| |||||||| | ||||||||||    
T  29743326 tgcaaaaattatcgattgagcccgggcaaccgcccggg 29743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 18339249 - 18339106
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| | ||| || |||||    
T  18339249 taaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattgggtctaatg 18339150  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  18339149 tgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 33229360 - 33229484
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||| || |||| ||||| ||||| | ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || |||||    
T  33229360 taaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaaatttttctttttggaaatgtgttaatggacttttgggttgggtctaatg 33229459  T
Q  101 tgcaaaaattatcgatcgagcccgg 125  Q
    | ||||||| |||||||||||||||    
T  33229460 tacaaaaatgatcgatcgagcccgg 33229484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 48 - 144
Target Start/End: Original strand, 31028435 - 31028531
Alignment:
Q  48 ccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||| ||| |||||||||||||||||||||  ||||| |||||  | ||||||||||||||||||||||||| |||| | ||||| ||||||||||    
T  31028435 ccaaaatttcctttttgtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgcc 31028531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 24697899 - 24698004
Alignment:
Q  59 tttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccg 158  Q
    ||||||||| ||||||||||| ||||| ||||| |  ||||||| ||||||||||||| |||||||| |||  | |||||||||||   ||||  |||||    
T  24697899 tttttgtaagtgtgttaatgggcttttgggttgggcctaatgtgaaaaaattatcgattgagcccgggcgagtgtccggggtcgccgggcggtgaaaccg 24697998  T
Q  159 ccactg 164  Q
    ||||||    
T  24697999 ccactg 24698004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 13647053 - 13647017
Alignment:
Q  108 attatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||| ||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgcc 13647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 3050154 - 3050098
Alignment:
Q  69 tgtgttaatggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgg 125  Q
    ||||||||||| ||||| ||||| | | |||||||||||||||| ||| ||||||||    
T  3050154 tgtgttaatgggcttttcggttgcgctcaatgtgcaaaaattattgattgagcccgg 3050098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 3e-61; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 42310965 - 42311124
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |||||    
T  42310965 taaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaacgggcttttgggttgagtctaatg 42311064  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||||||||||||||||||||| ||| || | |||||||||||||||||||||||||    
T  42311065 tgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgcc 42311124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 26144397 - 26144239
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  26144397 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttgagtctaatgt 26144298  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  26144297 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 26144239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 32982080 - 32982236
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||| ||||| || |||||    
T  32982080 taaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaatgggcttttaggttgggtctaatg 32982179  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaacc 157  Q
    |||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  32982180 tgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 7433588 - 7433429
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||    
T  7433588 taaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgggcttttgggttgagtctaatg 7433489  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||    
T  7433488 tgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcc 7433429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 321401 - 321536
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||  | |||||    
T  321401 taaataaaattccgagacctatttgcatatgagaattttcagattgcccaaatttttctttttgtaactgtgttaatggacttttgggttggatctaatg 321500  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccg 136  Q
      ||||||||||||||||||||||||||||||||||    
T  321501 cacaaaaattatcgatcgagcccggacgaccgcccg 321536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3829126 - 3828988
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    |||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||    
T  3829126 taaataaaattcca-gacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaatgaacttttgggttgggtttaatg 3829028  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggt 140  Q
    ||||||||||||||||||| ||||  |||||| |||||||    
T  3829027 tgcaaaaattatcgatcgaacccgagcgaccgtccggggt 3828988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17445456 - 17445313
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||  | |||||    
T  17445456 taaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattgacttttgggttggatctaatg 17445357  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    | |||||||||| |||| ||||||| |||||||  |||||||||    
T  17445356 tacaaaaattattgatccagcccgggcgaccgcatggggtcgcc 17445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 35907695 - 35907552
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||  |||| | ||||| ||||| || |||||    
T  35907695 taaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaattggcttttgggttgggtctaatg 35907596  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||    
T  35907595 tgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgcc 35907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 38 - 160
Target Start/End: Complemental strand, 23313345 - 23313222
Alignment:
Q  38 ttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaa-aaattatcgatcgagcccggacgaccgcccg 136  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||| |||| ||| ||||||||||| | ||||||||    
T  23313345 ttcagattgcccaaatttttctttttgtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccg 23313246  T
Q  137 gggtcgccatacggtagaaccgcc 160  Q
     | |||||||||||||||||||||    
T  23313245 agatcgccatacggtagaaccgcc 23313222  T

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Target: chr1; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 41972314 - 41972457
Alignment:
Q  18 cctatttgcgtgtgacaattttcagattgc--ccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||||||||||| ||||||||||||    |||||||||||||||||||| ||||||||| | ||||| |||||  | ||||||||||||||||||||    
T  41972314 cctatttgcgtgtgagaattttcagattttttccaaatttttctttttgtaagtgtgttaataggcttttaggttggatctaatgtgcaaaaattatcga 41972413  T
Q  116 tcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    ||||||| || |||||||||||||||||   ||||| ||||||||    
T  41972414 tcgagccagg-cgaccgcccggggtcgctggacggtggaaccgcc 41972457  T

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Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 33489815 - 33489687
Alignment:
Q  18 cctatttgcgtgtgacaattttcagatt--gcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgtgcaaaaattatcga 115  Q
    ||||||||||||||| ||||||||||||  || |||||||||||||| |||| ||||||||||| ||||| | |||||| |||||| |||||||||||||    
T  33489815 cctatttgcgtgtgagaattttcagattttgctcaaatttttcttttagtaagtgtgttaatgggcttttagtttgagtctaatgtacaaaaattatcga 33489716  T
Q  116 tcgagcccggacgaccgcccggggtcgcc 144  Q
     | | |||| ||||||| |||||||||||    
T  33489715 acaatcccgaacgaccgtccggggtcgcc 33489687  T

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Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 35951464 - 35951497
Alignment:
Q  96 taatgtgcaaaaattatcgatcgagcccggacga 129  Q
    |||||| |||||||||||||||||||||||||||    
T  35951464 taatgtacaaaaattatcgatcgagcccggacga 35951497  T

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Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 108 - 144
Target Start/End: Original strand, 44352614 - 44352650
Alignment:
Q  108 attatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  44352614 attatcgatcgagcccgggcgacctcccggggtcgcc 44352650  T

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Target: scaffold0002 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 160
Target Start/End: Original strand, 480482 - 480640
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  480482 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttgagtctaatgt 480581  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||||||||    
T  480582 gcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcc 480640  T

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Target: scaffold2142 (Bit Score: 115; Significance: 3e-58; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 664 - 506
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||    
T  664 aaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaatgagctttttggttgagtctaatgt 565  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcc 160  Q
    |||||||||||||||||||||||| |||||||||||| |||| | ||||| ||||||||    
T  564 gcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcc 506  T

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Target: scaffold0502 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 5373 - 5230
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||||| | ||||| | ||| || |||||    
T  5373 taaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaattggcttttagattgggtctaatg 5274  T
Q  101 tgcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  5273 tgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

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Target: scaffold0041 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 53068 - 52941
Alignment:
Q  1 taaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatg 100  Q
    ||||||||||||| |||||||||||| ||||| ||||||||||||| |||||||||||||||||||||||||||||| | ||||| |||| | | |||||    
T  53068 taaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaattggcttttgggttaaatctaatg 52969  T
Q  101 tgcaaaaattatcgatcgagcccggacg 128  Q
    ||||||||||||||||||||||||||||    
T  52968 tgcaaaaattatcgatcgagcccggacg 52941  T

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Target: scaffold0154 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 144
Target Start/End: Complemental strand, 31622 - 31480
Alignment:
Q  2 aaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatggactttttggttgagtttaatgt 101  Q
    |||||||||| | ||||||||||||| |||| ||||||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| || || |||    
T  31622 aaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaatgggcttttgggttgggtctagtgt 31523  T
Q  102 gcaaaaattatcgatcgagcccggacgaccgcccggggtcgcc 144  Q
    |||||||||||||||||||||||| |||||| | |||||||||    
T  31522 gcaaaaattatcgatcgagcccgggcgaccgtctggggtcgcc 31480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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