View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4168_high_23 (Length: 250)
Name: NF4168_high_23
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4168_high_23 |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 35431626 - 35431865
Alignment:
| Q |
1 |
tgtttaaatacaattgataaggataatataaaattggtaatttcttgaaaattagttcacaatctaaatgtgagtattaaattgagaggggggagtacaa |
100 |
Q |
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| T |
35431626 |
tgtttaaatacaattgataaggataatataaaattggtaatttcttgaaaaatagttcacaatctaaatgtgagtattaaattgagaggggggagtacaa |
35431725 |
T |
|
| Q |
101 |
ccaaactcttgcagtgaaagtgaactaacacctcatatagcaactttccccatcccccactcagcgatagatgtagcttactctatttattgatcggaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35431726 |
ccaaactcttgcagtgaaagtgaactaacacctcatatagcaacttcccccatcccccactcagcgatagatgtagcttactctatttattgatcggaaa |
35431825 |
T |
|
| Q |
201 |
cgaacttcttcaagtacacaaaactttcactgactctgtg |
240 |
Q |
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||||||||||||||||||||||||||||||| |||||||| |
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| T |
35431826 |
cgaacttcttcaagtacacaaaactttcactcactctgtg |
35431865 |
T |
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