View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4168_high_34 (Length: 226)
Name: NF4168_high_34
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4168_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 213
Target Start/End: Complemental strand, 25989249 - 25989046
Alignment:
| Q |
10 |
agattatactaccatttactggattattaggaacatgaaattaacatctcttccacatcctaaagacatgcaacaacaataaaaaccaccaaagtccttt |
109 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25989249 |
agataatactaccatttactggattattaggaacatgaaattaacatctcttccacatcctaaagacatgcaacaacaataaaaaccaccaaagtccttt |
25989150 |
T |
|
| Q |
110 |
tccattaaaaggggtgaacttttatatcctaaagacatgatagactagaatgtggatttcactgccaactgaattacatacaaagtaagcgctaacacag |
209 |
Q |
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|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25989149 |
tccattaagtggggtgaacttttatatcctaaagaaatgatagactagaatgtggatttcactgccaactgaattacatacaaagtaagcgctaacacag |
25989050 |
T |
|
| Q |
210 |
acac |
213 |
Q |
| |
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|||| |
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| T |
25989049 |
acac |
25989046 |
T |
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