View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4168_low_19 (Length: 325)
Name: NF4168_low_19
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4168_low_19 |
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Alignment Details
Target: chr1 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 18 - 268
Target Start/End: Original strand, 51921192 - 51921423
Alignment:
| Q |
18 |
acttggatataaataacacttcgacattcaacctaaaacttactgtttttaagcacacctaaaataaaaacccttacatgaaccattttattacttctta |
117 |
Q |
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| T |
51921192 |
acttggatataaataacacttcgacattcaacctaaaatttactgtttttaagcacacctaaaataaaaacccttacatgaaccattttattacttctta |
51921291 |
T |
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| Q |
118 |
ggnnnnnnnnnnnngaagaaattactacttagctcatcatgctacaaagatgcaagaaacataaaagaaataatggggtggatgaaatatttaatgtaaa |
217 |
Q |
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| T |
51921292 |
ggtttttcttttttgaagaaattactacttagctcatcatgctacaaagatgcaagaaacataaaagaaataatggggtggatga--------------- |
51921376 |
T |
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| Q |
218 |
aaataaagcattacatatatagcagaaaaagtcatcagggaatttctattt |
268 |
Q |
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| T |
51921377 |
----aaagcattacatatatagcagaaaaagtcatcagggaatttctattt |
51921423 |
T |
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