View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4168_low_28 (Length: 249)
Name: NF4168_low_28
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4168_low_28 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 12 - 249
Target Start/End: Original strand, 38347845 - 38348082
Alignment:
| Q |
12 |
tatactactcttactctaacctattgctataagacagctcgctcctcttgatcaatcatcatgcatctgctattccctttatagcattcttagctgtttt |
111 |
Q |
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| T |
38347845 |
tatactactcttactctaacctattgctataagacagctcgctcctcttgatcaatcatcatgcatctgctattccctttatagcattcttagctgtttt |
38347944 |
T |
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| Q |
112 |
tatttcgaattcaatttcttccttttcttccaaactctgcatgttaaatcctttccttttaaattcactgtttcacaagatgggttatgtctttatgatt |
211 |
Q |
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| T |
38347945 |
tattttgaattcaatttcttccttttcttccaaactctgcatgttaaatcctttccttttaaattcactgtttcacaagatgggttatgtctttatgatt |
38348044 |
T |
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| Q |
212 |
cctcctttactatagtatctacctcctttattacatat |
249 |
Q |
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| T |
38348045 |
cctcctttactatagtatctacctcctttattacatat |
38348082 |
T |
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