View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4168_low_35 (Length: 236)

Name: NF4168_low_35
Description: NF4168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4168_low_35
NF4168_low_35
[»] scaffold0193 (1 HSPs)
scaffold0193 (13-236)||(22567-22787)
[»] chr7 (60 HSPs)
chr7 (76-233)||(28605472-28605627)
chr7 (76-236)||(38876178-38876338)
chr7 (76-236)||(20516947-20517107)
chr7 (76-234)||(18123092-18123250)
chr7 (76-236)||(45225420-45225580)
chr7 (76-236)||(11327623-11327783)
chr7 (76-232)||(32852888-32853043)
chr7 (163-233)||(14777957-14778027)
chr7 (163-233)||(15230095-15230165)
chr7 (163-236)||(8048066-8048139)
chr7 (76-233)||(12080729-12080885)
chr7 (27-234)||(22479235-22479438)
chr7 (163-236)||(45225287-45225360)
chr7 (163-236)||(48193180-48193253)
chr7 (168-236)||(33889109-33889177)
chr7 (163-234)||(48454642-48454713)
chr7 (170-236)||(14719098-14719164)
chr7 (171-236)||(4655072-4655137)
chr7 (76-233)||(7437809-7437966)
chr7 (163-236)||(24720288-24720361)
chr7 (163-236)||(27811969-27812042)
chr7 (163-236)||(34986552-34986625)
chr7 (176-236)||(18199595-18199655)
chr7 (171-234)||(1325335-1325398)
chr7 (163-236)||(43711939-43712013)
chr7 (175-236)||(18829698-18829759)
chr7 (163-236)||(26380173-26380246)
chr7 (163-236)||(27597047-27597120)
chr7 (131-196)||(454170-454235)
chr7 (131-196)||(25818550-25818615)
chr7 (131-236)||(41407369-41407473)
chr7 (139-235)||(11766149-11766244)
chr7 (163-234)||(14770103-14770175)
chr7 (163-234)||(15220554-15220626)
chr7 (76-116)||(18829844-18829884)
chr7 (76-116)||(27597179-27597219)
chr7 (76-116)||(32577716-32577756)
chr7 (131-234)||(2509386-2509487)
chr7 (76-115)||(18199720-18199759)
chr7 (131-194)||(18352381-18352444)
chr7 (131-193)||(9401721-9401783)
chr7 (78-116)||(17317405-17317443)
chr7 (171-217)||(37139041-37139087)
chr7 (131-236)||(938922-939026)
chr7 (131-196)||(27168305-27168370)
chr7 (131-236)||(28912109-28912213)
chr7 (76-116)||(8047984-8048024)
chr7 (76-116)||(14778073-14778113)
chr7 (76-116)||(15230211-15230251)
chr7 (76-116)||(37138946-37138986)
chr7 (76-111)||(4655201-4655236)
chr7 (78-116)||(34986672-34986710)
chr7 (131-192)||(2633958-2634019)
chr7 (163-236)||(2936667-2936739)
chr7 (76-116)||(14770221-14770261)
chr7 (76-116)||(15220672-15220712)
chr7 (76-116)||(24720407-24720447)
chr7 (172-236)||(27168359-27168422)
chr7 (76-116)||(27812088-27812128)
chr7 (76-112)||(33889907-33889943)
[»] chr5 (43 HSPs)
chr5 (76-236)||(30687927-30688087)
chr5 (76-236)||(1951446-1951605)
chr5 (76-236)||(15808985-15809145)
chr5 (163-235)||(27005179-27005251)
chr5 (168-235)||(14795707-14795774)
chr5 (163-236)||(3960737-3960810)
chr5 (168-236)||(1797427-1797495)
chr5 (76-236)||(29302117-29302277)
chr5 (163-236)||(33833153-33833226)
chr5 (77-236)||(11448747-11448906)
chr5 (76-236)||(4736809-4736965)
chr5 (170-236)||(17605055-17605121)
chr5 (163-236)||(33026242-33026315)
chr5 (163-235)||(33282271-33282343)
chr5 (163-236)||(7014540-7014613)
chr5 (131-236)||(31240311-31240415)
chr5 (172-236)||(1921474-1921538)
chr5 (77-236)||(26905912-26906067)
chr5 (163-236)||(30486124-30486197)
chr5 (76-116)||(7014636-7014676)
chr5 (76-116)||(17209889-17209929)
chr5 (131-195)||(33696104-33696168)
chr5 (76-116)||(37249436-37249476)
chr5 (77-116)||(4151096-4151135)
chr5 (76-232)||(37282200-37282352)
chr5 (135-236)||(3038898-3038998)
chr5 (131-236)||(14369778-14369882)
chr5 (163-236)||(17421705-17421777)
chr5 (131-196)||(25912109-25912174)
chr5 (76-116)||(3960651-3960691)
chr5 (76-116)||(17559237-17559277)
chr5 (76-116)||(22282225-22282265)
chr5 (131-235)||(31752128-31752231)
chr5 (131-194)||(7944340-7944403)
chr5 (131-194)||(12910089-12910152)
chr5 (163-236)||(17209975-17210045)
chr5 (136-235)||(39548912-39549010)
chr5 (131-196)||(4083788-4083853)
chr5 (131-196)||(39038569-39038634)
chr5 (76-116)||(1807525-1807565)
chr5 (76-116)||(30667594-30667634)
chr5 (76-116)||(33026361-33026401)
chr5 (80-116)||(37468667-37468703)
[»] chr3 (55 HSPs)
chr3 (76-236)||(7521379-7521539)
chr3 (76-233)||(37504565-37504721)
chr3 (76-236)||(6114802-6114962)
chr3 (76-236)||(6748664-6748823)
chr3 (76-236)||(7848548-7848707)
chr3 (76-236)||(21727666-21727826)
chr3 (76-236)||(51148026-51148185)
chr3 (76-236)||(6109178-6109338)
chr3 (76-236)||(12896658-12896818)
chr3 (84-236)||(26158254-26158406)
chr3 (76-236)||(47461715-47461875)
chr3 (77-236)||(8815353-8815510)
chr3 (163-236)||(994822-994895)
chr3 (163-236)||(4043649-4043722)
chr3 (163-236)||(11460171-11460244)
chr3 (163-236)||(17226275-17226348)
chr3 (163-236)||(45059633-45059706)
chr3 (172-236)||(26152307-26152371)
chr3 (130-236)||(3544309-3544416)
chr3 (173-236)||(27800485-27800548)
chr3 (171-236)||(38797999-38798064)
chr3 (76-236)||(51952222-51952383)
chr3 (172-236)||(27728212-27728276)
chr3 (163-236)||(995128-995202)
chr3 (163-236)||(2868264-2868337)
chr3 (163-236)||(17065747-17065820)
chr3 (131-194)||(32203210-32203273)
chr3 (131-196)||(8814833-8814898)
chr3 (131-200)||(34277553-34277621)
chr3 (76-116)||(4043776-4043816)
chr3 (76-116)||(11460290-11460330)
chr3 (76-116)||(17226216-17226256)
chr3 (76-116)||(26152524-26152564)
chr3 (76-116)||(30347788-30347828)
chr3 (131-236)||(13349151-13349255)
chr3 (131-196)||(17605528-17605593)
chr3 (191-236)||(21408611-21408656)
chr3 (163-236)||(53467455-53467527)
chr3 (76-116)||(994736-994776)
chr3 (76-116)||(995042-995082)
chr3 (76-116)||(3269247-3269287)
chr3 (76-116)||(26152211-26152251)
chr3 (76-116)||(27728334-27728374)
chr3 (131-234)||(27317657-27317759)
chr3 (131-190)||(29950609-29950668)
chr3 (131-190)||(29999763-29999822)
chr3 (137-236)||(50801590-50801688)
chr3 (137-236)||(50874192-50874290)
chr3 (131-196)||(12127596-12127661)
chr3 (131-236)||(31039629-31039733)
chr3 (76-116)||(48649433-48649474)
chr3 (131-236)||(53581575-53581679)
chr3 (76-116)||(27800587-27800627)
chr3 (76-116)||(45059546-45059586)
chr3 (76-116)||(52654455-52654495)
[»] chr2 (37 HSPs)
chr2 (76-236)||(39906293-39906453)
chr2 (76-236)||(7682029-7682187)
chr2 (76-236)||(4293228-4293387)
chr2 (76-236)||(9689399-9689559)
chr2 (76-236)||(20939734-20939893)
chr2 (163-236)||(3769477-3769550)
chr2 (163-236)||(33173522-33173595)
chr2 (76-236)||(44257481-44257642)
chr2 (76-236)||(9690182-9690341)
chr2 (76-236)||(39904677-39904837)
chr2 (76-236)||(44542872-44543031)
chr2 (163-236)||(22302088-22302161)
chr2 (163-236)||(22711143-22711216)
chr2 (145-236)||(324980-325071)
chr2 (163-236)||(2586404-2586477)
chr2 (163-236)||(6332386-6332459)
chr2 (163-236)||(15554132-15554205)
chr2 (76-236)||(30406485-30406644)
chr2 (76-236)||(38986982-38987142)
chr2 (131-236)||(13002048-13002152)
chr2 (76-116)||(3769707-3769747)
chr2 (181-236)||(23234075-23234130)
chr2 (136-234)||(1750217-1750314)
chr2 (78-116)||(2586523-2586561)
chr2 (163-200)||(17265367-17265404)
chr2 (131-196)||(33739611-33739676)
chr2 (131-236)||(34082631-34082735)
chr2 (76-116)||(1297614-1297654)
chr2 (76-116)||(6332300-6332340)
chr2 (134-190)||(8386766-8386822)
chr2 (76-116)||(22711057-22711097)
chr2 (181-235)||(8741623-8741677)
chr2 (131-236)||(11675216-11675321)
chr2 (131-192)||(16513140-16513201)
chr2 (131-196)||(18370296-18370361)
chr2 (76-116)||(15554046-15554086)
chr2 (76-116)||(33173640-33173680)
[»] chr6 (32 HSPs)
chr6 (77-236)||(29646241-29646400)
chr6 (76-236)||(15962750-15962910)
chr6 (76-236)||(31132889-31133049)
chr6 (77-236)||(8171901-8172059)
chr6 (163-236)||(27828411-27828484)
chr6 (76-236)||(11100393-11100553)
chr6 (162-236)||(20755454-20755528)
chr6 (163-236)||(4184359-4184432)
chr6 (76-236)||(9955808-9955968)
chr6 (76-224)||(26667878-26668026)
chr6 (163-236)||(1369998-1370071)
chr6 (168-226)||(16599174-16599232)
chr6 (163-236)||(10778043-10778116)
chr6 (163-236)||(5187869-5187942)
chr6 (131-236)||(14488321-14488425)
chr6 (76-116)||(5187783-5187823)
chr6 (76-116)||(11210310-11210350)
chr6 (76-116)||(15881939-15881979)
chr6 (76-116)||(16599082-16599122)
chr6 (76-116)||(24022882-24022922)
chr6 (76-116)||(35002030-35002070)
chr6 (76-115)||(10196610-10196649)
chr6 (168-236)||(10315307-10315376)
chr6 (76-116)||(1369912-1369952)
chr6 (76-116)||(10777956-10777996)
chr6 (131-194)||(4898512-4898575)
chr6 (76-111)||(27828320-27828355)
chr6 (131-194)||(30525420-30525483)
chr6 (163-234)||(33730546-33730616)
chr6 (134-200)||(26211348-26211414)
chr6 (131-196)||(15718270-15718335)
chr6 (208-236)||(15882030-15882058)
[»] chr4 (54 HSPs)
chr4 (76-236)||(12584298-12584458)
chr4 (77-236)||(5157044-5157202)
chr4 (163-236)||(18470303-18470376)
chr4 (163-236)||(3818790-3818863)
chr4 (76-236)||(13211861-13212020)
chr4 (76-236)||(42807923-42808083)
chr4 (76-236)||(49970641-49970799)
chr4 (76-227)||(10216264-10216414)
chr4 (163-236)||(5046739-5046812)
chr4 (163-236)||(41172456-41172529)
chr4 (76-236)||(50182221-50182378)
chr4 (76-236)||(6214029-6214189)
chr4 (76-236)||(7630103-7630263)
chr4 (76-236)||(13371257-13371416)
chr4 (76-236)||(13381458-13381617)
chr4 (76-236)||(14202882-14203042)
chr4 (76-236)||(21519777-21519937)
chr4 (130-236)||(10981367-10981473)
chr4 (163-236)||(578858-578931)
chr4 (163-236)||(13621413-13621486)
chr4 (163-236)||(17180996-17181069)
chr4 (163-236)||(48560044-48560117)
chr4 (76-236)||(13621144-13621303)
chr4 (168-236)||(17745194-17745262)
chr4 (163-236)||(45801850-45801926)
chr4 (76-224)||(17377551-17377699)
chr4 (76-236)||(34683060-34683220)
chr4 (131-234)||(6137578-6137680)
chr4 (163-236)||(30820587-30820661)
chr4 (76-236)||(51783981-51784142)
chr4 (131-236)||(26335769-26335873)
chr4 (163-224)||(30258225-30258286)
chr4 (163-236)||(52437537-52437609)
chr4 (76-116)||(17745311-17745351)
chr4 (76-116)||(26958702-26958742)
chr4 (76-116)||(30820501-30820541)
chr4 (76-114)||(30258139-30258177)
chr4 (131-236)||(6946673-6946777)
chr4 (131-196)||(23384002-23384067)
chr4 (76-116)||(5046653-5046693)
chr4 (134-226)||(11777578-11777669)
chr4 (131-195)||(14863040-14863104)
chr4 (131-235)||(15725208-15725311)
chr4 (131-195)||(20458912-20458976)
chr4 (76-115)||(3818912-3818951)
chr4 (163-194)||(43639068-43639099)
chr4 (138-196)||(49606086-49606144)
chr4 (131-196)||(9744211-9744276)
chr4 (131-196)||(49425839-49425904)
chr4 (76-116)||(17181118-17181158)
chr4 (76-116)||(41172575-41172615)
chr4 (167-195)||(43639045-43639073)
chr4 (76-116)||(47382317-47382357)
chr4 (76-116)||(48560163-48560203)
[»] chr1 (48 HSPs)
chr1 (163-236)||(13943359-13943432)
chr1 (163-236)||(14387497-14387570)
chr1 (76-236)||(20411207-20411367)
chr1 (77-236)||(16960294-16960452)
chr1 (130-236)||(32716421-32716527)
chr1 (77-234)||(36817661-36817818)
chr1 (76-236)||(27255662-27255822)
chr1 (76-235)||(52772256-52772415)
chr1 (76-235)||(14494379-14494538)
chr1 (163-233)||(27389505-27389575)
chr1 (76-236)||(12864307-12864465)
chr1 (163-236)||(39424365-39424438)
chr1 (76-236)||(1805003-1805162)
chr1 (76-236)||(13385749-13385909)
chr1 (77-236)||(32374554-32374713)
chr1 (131-236)||(10764623-10764728)
chr1 (175-236)||(28094446-28094507)
chr1 (163-236)||(43236259-43236332)
chr1 (76-236)||(47130929-47131089)
chr1 (131-204)||(32144057-32144130)
chr1 (131-236)||(34515196-34515300)
chr1 (132-236)||(27787867-27787970)
chr1 (131-236)||(463378-463482)
chr1 (131-236)||(16005590-16005694)
chr1 (131-196)||(32151931-32151996)
chr1 (131-236)||(32156009-32156113)
chr1 (80-116)||(24190874-24190910)
chr1 (76-116)||(27389624-27389664)
chr1 (76-116)||(43236164-43236204)
chr1 (168-236)||(51465037-51465104)
chr1 (131-196)||(3273397-3273462)
chr1 (131-196)||(6192491-6192556)
chr1 (131-236)||(26843063-26843167)
chr1 (131-196)||(28454770-28454835)
chr1 (131-236)||(36389524-36389628)
chr1 (131-195)||(8643062-8643126)
chr1 (76-112)||(28646772-28646808)
chr1 (76-116)||(39424279-39424319)
chr1 (131-234)||(13264559-13264661)
chr1 (131-234)||(42199881-42199983)
chr1 (131-234)||(42208749-42208851)
chr1 (163-236)||(13157657-13157729)
chr1 (163-200)||(27348224-27348261)
chr1 (163-196)||(51431911-51431944)
chr1 (168-236)||(5491704-5491771)
chr1 (76-116)||(20201832-20201872)
chr1 (76-116)||(28094552-28094592)
chr1 (76-116)||(51465155-51465195)
[»] chr8 (44 HSPs)
chr8 (76-235)||(1783015-1783173)
chr8 (163-236)||(9483748-9483821)
chr8 (76-236)||(14826316-14826475)
chr8 (76-236)||(21442141-21442300)
chr8 (168-236)||(41942960-41943028)
chr8 (163-236)||(19971456-19971529)
chr8 (163-236)||(21021284-21021357)
chr8 (171-236)||(42556441-42556506)
chr8 (76-236)||(30577881-30578041)
chr8 (77-236)||(31071568-31071725)
chr8 (168-236)||(25281054-25281122)
chr8 (131-236)||(13468326-13468430)
chr8 (163-216)||(21442395-21442448)
chr8 (131-196)||(23544856-23544921)
chr8 (131-236)||(27545827-27545931)
chr8 (131-236)||(32486952-32487056)
chr8 (76-116)||(1775540-1775580)
chr8 (76-116)||(3154214-3154254)
chr8 (76-116)||(4018680-4018720)
chr8 (131-195)||(8258387-8258451)
chr8 (131-234)||(13269261-13269363)
chr8 (131-234)||(13290563-13290665)
chr8 (187-236)||(2178731-2178780)
chr8 (131-196)||(10616358-10616423)
chr8 (131-196)||(32069089-32069154)
chr8 (131-196)||(36899806-36899871)
chr8 (76-116)||(5642656-5642696)
chr8 (76-116)||(5644597-5644637)
chr8 (76-116)||(14819320-14819360)
chr8 (80-116)||(18804339-18804375)
chr8 (76-116)||(19971575-19971615)
chr8 (76-116)||(21021198-21021238)
chr8 (76-116)||(25281009-25281049)
chr8 (131-191)||(30207234-30207294)
chr8 (163-236)||(5642545-5642615)
chr8 (163-236)||(5644486-5644556)
chr8 (131-234)||(30633092-30633194)
chr8 (131-196)||(1201736-1201801)
chr8 (131-236)||(26042966-26043070)
chr8 (131-196)||(45299652-45299717)
chr8 (208-236)||(3154132-3154160)
chr8 (76-116)||(9483662-9483702)
chr8 (131-195)||(9483985-9484049)
chr8 (76-116)||(41942872-41942912)
[»] scaffold0074 (1 HSPs)
scaffold0074 (76-236)||(26064-26224)
[»] scaffold0068 (1 HSPs)
scaffold0068 (79-236)||(57920-58077)
[»] scaffold0002 (2 HSPs)
scaffold0002 (163-236)||(452465-452538)
scaffold0002 (76-116)||(452379-452419)
[»] scaffold0119 (2 HSPs)
scaffold0119 (76-224)||(2767-2915)
scaffold0119 (76-224)||(14822-14970)
[»] scaffold0031 (1 HSPs)
scaffold0031 (76-116)||(82755-82795)
[»] scaffold0217 (1 HSPs)
scaffold0217 (131-196)||(20686-20751)
[»] scaffold0015 (1 HSPs)
scaffold0015 (131-236)||(9799-9903)


Alignment Details
Target: scaffold0193 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 22567 - 22787
Alignment:
Q  13 aatatgtactacatccactagattttatgtggttgtattttaacaagttttaactnnnnnnnngttaataaatacaccttgaggtgtatgttgctataac 112  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  22567 aatatgtactacatccattagattttatgtgcttgtattttaacaagttttaactaaaaaaa-gttaataaatacaccttgaggtgtatgttgctataac 22665  T
Q  113 acacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtg 212  Q
    |||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22666 acacttttgaaaaaa--caagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtcatttggtaagtg 22763  T
Q  213 aataactaaaaagtggttaaatac 236  Q
    ||||| ||||||||||||||||||    
T  22764 aataattaaaaagtggttaaatac 22787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 28605627 - 28605472
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||||||||||||||||| || ||          ||||||||||| | ||||||| || |||| || |||| ||||||||    
T  28605627 gttaataaatacaccttaaggtgtatgttgctataacatacctt--ctaaaaaacaagtgggtgtgttttagcaaattctataggtatttgctagaatac 28605530  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  28605529 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaa 28605472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 38876178 - 38876338
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  38876178 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 38876277  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  38876278 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 38876338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 20517107 - 20516947
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  20517107 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 20517008  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  20517007 acccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 20516947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 234
Target Start/End: Original strand, 18123092 - 18123250
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  18123092 gttaataaatacaccttaaggtgtatgttgctataacacaccttctgacaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 18123191  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  18123192 acccacttagtttttagaaggagtattttagtaagtgaataactaaaaagtggttaaat 18123250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 45225580 - 45225420
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| | ||||||||| ||||||||||| ||          ||||||||||| |  |||||| || |||| |  |||| ||||||||    
T  45225580 gttaataaatacaccttaatgtgtatgttactataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaattctataggcatttgctagaatac 45225481  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  45225480 acccacttattttttagaaggagtattttagcaagttaataactaaaaagtggttaaatac 45225420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 11327783 - 11327623
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  11327783 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaataagtgggtgtgttctagcaaatcctataggcatttgctaggatac 11327684  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  11327683 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 11327623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 32853043 - 32852888
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  ||||    |||| ||||||||    
T  32853043 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttatagcaaatcctatagacatttgctagaatac 32852945  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaa 232  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||    
T  32852944 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaa 32852888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 14778027 - 14777957
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  14778027 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaa 14777957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 15230165 - 15230095
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  15230165 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaa 15230095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 8048066 - 8048139
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  8048066 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 8048139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 12080885 - 12080729
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  12080885 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaat-aagtgggtgtgttctagcaaatcctataggcatttgctagaatac 12080787  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    ||||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||    
T  12080786 acccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaa 12080729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 22479438 - 22479235
Alignment:
Q  27 ccactagattttatgtggttgtattttaacaagttttaactnnnnnnnngttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnn 126  Q
    ||||||| |||||||||| ||| |||||||||||| |||||        ||||||||||||||||| |||||||||||||||||  |||| || |         
T  22479438 ccactagtttttatgtgggtgtgttttaacaagttataactaaaaa---gttaataaatacaccttaaggtgtatgttgctataggacaccttcgaaaaa 22479342  T
Q  127 nnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagt 226  Q
       ||||||||||| |  || ||| |  |||||   |||| ||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||    
T  22479341 aa-caagtgggtgtgttctatcaaatcctatatacatttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagt 22479243  T
Q  227 ggttaaat 234  Q
    ||||||||    
T  22479242 ggttaaat 22479235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 45225360 - 45225287
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  45225360 tttgctagaatacacccacttattttttagaaggagtattttagcaagttaataactaaaaagtggttaaatac 45225287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 48193253 - 48193180
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||||||||| |||   || ||||||||||||||||||||||||||    
T  48193253 tttgttagaatacacccacttattttttagaaggagtattttaacaaatgaataactaaaaagtggttaaatac 48193180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 33889177 - 33889109
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||| ||||||||||    
T  33889177 tagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaaggggttaaatac 33889109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 48454642 - 48454713
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||    
T  48454642 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaagaactaaaaagtggttaaat 48454713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 170 - 236
Target Start/End: Original strand, 14719098 - 14719164
Alignment:
Q  170 gaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  14719098 gaatacacccacttattttttagaaggagtattttaacaagtgaataactaaaaagtggttaaatac 14719164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 4655137 - 4655072
Alignment:
Q  171 aatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  4655137 aatacacccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 4655072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 233
Target Start/End: Original strand, 7437809 - 7437966
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||||| || ||||||||||||||||||||||| ||          ||||||||||| |  ||| || |  |||| |  |||| ||||||||    
T  7437809 gttaataaatacacattaaggtgtatgttgctataacacaccttccaaaaaaaacaagtgggtgtgttatagtaaatcctataggcatttgctagaatac 7437908  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    ||||| ||||||||||||| ||||| ||| | ||||||||||||||||||||||||||    
T  7437909 acccaattattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaa 7437966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 24720361 - 24720288
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  24720361 tttgctagaatacacccacttattttttagaaggagtattttagcaaataaataactaaaaagtggttaaatac 24720288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 27812042 - 27811969
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||||||| |||||||||    
T  27812042 tttgctagaatacacccacttattttttagaaggagtattttaacaagtgaataactaaaaagtagttaaatac 27811969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 34986625 - 34986552
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| | ||||||| |||||||||||||||||||||    
T  34986625 tttgctagaatacacccacttattttttagaaagagtattttagcaagtgaagaactaaaaagtggttaaatac 34986552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 176 - 236
Target Start/End: Complemental strand, 18199655 - 18199595
Alignment:
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  18199655 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 18199595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 171 - 234
Target Start/End: Original strand, 1325335 - 1325398
Alignment:
Q  171 aatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||||||||||| |||||||    
T  1325335 aatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtagttaaat 1325398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 43712013 - 43711939
Alignment:
Q  163 tttgttagaatacacccacttatttttt-agaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||| ||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||    
T  43712013 tttgctagaatatacccacttatttttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 43711939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 18829759 - 18829698
Alignment:
Q  175 cacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||  || ||||| ||| |||||||||||||||||||||||||||||||    
T  18829759 cacccacttatttttttaaaagagtattttagtaagtgaataactaaaaagtggttaaatac 18829698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 26380173 - 26380246
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| |||||||| |||| ||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  26380173 tttgctaggatacacccgcttagtttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 26380246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 27597120 - 27597047
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||| ||||||||||||||||| ||||| ||| | || | ||||||||||||||||||||||||    
T  27597120 tttgctagaatacatccacttattttttagaatgagtattttagcaaataaataactaaaaagtggttaaatac 27597047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 454235 - 454170
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||||||| |||||||||||||||||||||||||    
T  454235 aagtgggtgtatgttagcaactcctataggcatttgttaggatacacccacttattttttagaagg 454170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 25818615 - 25818550
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| |||||||||||||||||||||||||||||    
T  25818615 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaagg 25818550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 41407473 - 41407369
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||| | ||  ||| | ||||  ||||||||||||| |||    
T  41407473 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaaagtgtgttttagcaagt-tataactaaaaagtagtt 41407375  T
Q  231 aaatac 236  Q
    ||||||    
T  41407374 aaatac 41407369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 11766244 - 11766149
Alignment:
Q  139 gtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    |||||||||||| | |||||||  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| ||||||||    
T  11766244 gtatgttagcaactcttatatgcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaata 11766149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 14770175 - 14770103
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtg-aataactaaaaagtggttaaat 234  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||| ||||| ||||| ||| ||||||    
T  14770175 tttgctagaatacacccacttattttttagaaggagtattttcgcaagtgaaataattaaaaggtgattaaat 14770103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 15220626 - 15220554
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtg-aataactaaaaagtggttaaat 234  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||| ||||| ||||| ||| ||||||    
T  15220626 tttgctagaatacacccacttattttttagaaggagtattttcgcaagtgaaataattaaaaggtgattaaat 15220554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 18829884 - 18829844
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  18829884 gttaataaatacaccttaaggtgtatgttgctataacacac 18829844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27597219 - 27597179
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27597219 gttaataaatacaccttaaggtgtatgttgctataacacac 27597179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 32577756 - 32577716
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  32577756 gttaataaatacaccttaaggtgtatgttgctataacacac 32577716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 2509386 - 2509487
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||| ||| |  ||||||  |||| ||||||||||||||||| ||||||||||| ||  ||| | ||||  |||||||||||||||||    
T  2509386 aagtgggtgtatgttaacaactcctatatgcatttgctagaatacacccactta-tttttagaaggtgtgttttagcaagt-tataactaaaaagtggtt 2509483  T
Q  231 aaat 234  Q
    ||||    
T  2509484 aaat 2509487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 18199759 - 18199720
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacaca 115  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  18199759 gttaataaatacaccttaaggtgtatgttgctataacaca 18199720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 18352381 - 18352444
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    |||||||||||||||||||| |  |||| |  |||| |||||||||||||||||||||||||||    
T  18352381 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaa 18352444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 9401721 - 9401783
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttaga 193  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||    
T  9401721 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttaga 9401783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 17317443 - 17317405
Alignment:
Q  78 taataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17317443 taataaatacaccttaaggtgtatgttgctataacacac 17317405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 37139041 - 37139087
Alignment:
Q  171 aatacacccacttattttttagaaggagtaatttggtaagtgaataa 217  Q
    |||||||||||||||||||||||||||||| ||| | ||||||||||    
T  37139041 aatacacccacttattttttagaaggagtattttagcaagtgaataa 37139087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 939026 - 938922
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  939026 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 938928  T
Q  231 aaatac 236  Q
    ||||||    
T  938927 aaatac 938922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 27168370 - 27168305
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  27168370 aagtgggtgtatgttagcaactcctataggcatttggtaggatacacccacttattttttagaagg 27168305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 28912213 - 28912109
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||  |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  28912213 aagtgggtgtatgttagcaactcctatgggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 28912115  T
Q  231 aaatac 236  Q
    ||||||    
T  28912114 aaatac 28912109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 8047984 - 8048024
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  8047984 gttaataaatacactttaaggtgtatgttgctataacacac 8048024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 14778113 - 14778073
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  14778113 gttaataaatacaccttaaggtgtatgttgctataatacac 14778073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 15230251 - 15230211
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  15230251 gttaataaatacaccttaaggtgtatgttgctataatacac 15230211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 37138946 - 37138986
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  37138946 gttaataaatacaccttaaggtatatgttgctataacacac 37138986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Complemental strand, 4655236 - 4655201
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataa 111  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4655236 gttaataaatacaccttaaggtgtatgttgctataa 4655201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 34986710 - 34986672
Alignment:
Q  78 taataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| |||||||||||| ||||||||||    
T  34986710 taataaatacaccttaaggtgtatgttgatataacacac 34986672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 2633958 - 2634019
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttag 192  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||| |||||||||||||    
T  2633958 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacctacttattttttag 2634019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 2936739 - 2936667
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  2936739 tttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 2936667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 14770261 - 14770221
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  14770261 gttaataagtacaccttaaggtgtatgtttctataacacac 14770221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 15220712 - 15220672
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||| |||||||| ||||||||||| |||||||||||    
T  15220712 gttaataagtacaccttaaggtgtatgtttctataacacac 15220672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 24720447 - 24720407
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| | ||||||||||||||||||| |||    
T  24720447 gttaataaatacaccattaggtgtatgttgctataacgcac 24720407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 27168359 - 27168422
Alignment:
Q  172 atacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  27168359 atacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 27168422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27812128 - 27812088
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||| || |||||||||||||||||| ||||    
T  27812128 gttaataaatacactttaaggtgtatgttgctataatacac 27812088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 33889943 - 33889907
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataac 112  Q
    |||||||||||||| || |||||||||||||||||||    
T  33889943 gttaataaatacacattaaggtgtatgttgctataac 33889907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 30687927 - 30688087
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  30687927 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 30688026  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  30688027 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 30688087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 1951446 - 1951605
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  | |||||||||||    
T  1951446 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaagaaacaagtgggtgtgttctagcaaatcctataggcatatgttagaatac 1951544  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||||    
T  1951545 acccacttattttttaaaaggagtattttagcaagtgaataactaaaaagtggttaaatac 1951605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 15809145 - 15808985
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  15809145 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 15809046  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  15809045 acccacttattttttagaaggagtattttagcaaattaataactaaaaagtggttaaatac 15808985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 163 - 235
Target Start/End: Original strand, 27005179 - 27005251
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    |||||||||||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||||    
T  27005179 tttgttagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaata 27005251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 14795774 - 14795707
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  14795774 tagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaata 14795707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 3960737 - 3960810
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  3960737 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 3960810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 1797495 - 1797427
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  1797495 tagaatacacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 1797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 29302117 - 29302277
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          |||||| |||| |  |||||| |  |||| |  |||| ||||||||    
T  29302117 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaagcaagtgagtgtgttctagcaaatcctataggcatttgctagaatac 29302216  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||||||| |||   |||||||||||||||| ||||||||||||    
T  29302217 acccgcttattttttagaaggagtattttaacaagtgaataactaaaaggtggttaaatac 29302277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 33833153 - 33833226
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||| ||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  33833153 tttgctaggatacacccacttagtttttagaaggagtattttagttagtgaataactaaaaagtggttaaatac 33833226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 11448906 - 11448747
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| |||||||||||| |||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| |||||    
T  11448906 ttaataaatacaccttaaggtgtatgttgttataacacaccttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggataca 11448807  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
     ||||||| ||||||||||||||| ||| | ||||||||| |||||||||||||||||||    
T  11448806 tccacttagtttttagaaggagtattttagcaagtgaatatctaaaaagtggttaaatac 11448747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 4736965 - 4736809
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  4736965 gttaataaatacaccttaaggtgtatgttgctataacacacattc-taaaaaaacaagtgggtgtgttatagcaaatcctataggcatttgctagaatac 4736867  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    | |||||||||||||||   ||||| ||| | |||||||||||||||||||||||||||||    
T  4736866 atccacttattttttag---gagtattttagcaagtgaataactaaaaagtggttaaatac 4736809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 17605121 - 17605055
Alignment:
Q  170 gaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||||||||| |||   |||| ||||||||||||||||||||||||    
T  17605121 gaatacacccacttattttttagaaggagtattttaacaagtaaataactaaaaagtggttaaatac 17605055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 33026315 - 33026242
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  33026315 tttgctagaatacaccgacttattttttagaaggagtattttagcaaattaataactaaaaagtggttaaatac 33026242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 33282343 - 33282271
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    |||| |||||| |||||||||||||||||||| ||||| ||| | ||||||||||||||||||| ||||||||    
T  33282343 tttgctagaatgcacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtagttaaata 33282271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 7014613 - 7014540
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||| ||||||||||||||||||||| ||||| ||| | || |||||||||||||| |||||||||||    
T  7014613 tttgctagaacacacccacttattttttagaatgagtattttagcaaatgaataactaaaaaatggttaaatac 7014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 31240311 - 31240415
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| | ||||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  31240311 aagtgggtgtatgttagcaactcttataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 31240409  T
Q  231 aaatac 236  Q
    ||||||    
T  31240410 aaatac 31240415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 1921538 - 1921474
Alignment:
Q  172 atacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||| |||||| ||| |||| ||| | |||||||||||||||||||||||||||||    
T  1921538 atacacccacttagtttttaaaagaagtattttagcaagtgaataactaaaaagtggttaaatac 1921474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 26906067 - 26905912
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| |||||||||    
T  26906067 ttaataaatacaccttaaggtgtatgttgctataacacacctt--ctaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaataca 26905970  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
     |||||||||||||   ||||||| ||| | || |||||||||||||||| |||||||||    
T  26905969 gccacttatttttt--taggagtattttagcaaatgaataactaaaaagttgttaaatac 26905912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 30486197 - 30486124
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||| ||||||| ||||||||| ||||| ||| | || ||||||||||||||||||||||||||    
T  30486197 tttgctaggatacatccacttagtttttagaatgagtattttagcaattgaataactaaaaagtggttaaatac 30486124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 7014676 - 7014636
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  7014676 gttaataaatacaccttaaggtgtatgttgctataacacac 7014636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17209889 - 17209929
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  17209889 gttaataaatacaccttaaggtgtatgttgctataacacac 17209929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 33696168 - 33696104
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||||    
T  33696168 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaag 33696104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 37249476 - 37249436
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  37249476 gttaataaatacaccttaaggtgtatgttgctataacacac 37249436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 116
Target Start/End: Complemental strand, 4151135 - 4151096
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  4151135 ttaataaatacatcttgaggtgtatgttgctataacacac 4151096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 232
Target Start/End: Complemental strand, 37282352 - 37282200
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||| ||||||||||| |||||||||||||||||||||||  ||         ||||||||||| |  |||||| |  |||| |  |||| || |||||    
T  37282352 gttaacaaatacaccttaaggtgtatgttgctataacacac-cttctaaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaaaatac 37282254  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaa 232  Q
    || ||||||||||||   ||||||| ||| | |||||||||||||||||||||||||    
T  37282253 actcacttatttttt---aggagtattttagcaagtgaataactaaaaagtggttaa 37282200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 3038998 - 3038898
Alignment:
Q  135 gggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    |||||||||||||||| |  |||| |  |||||||| ||||||||||||||||||||||| | ||  ||| | ||||  ||||||||||||| |||||||    
T  3038998 gggtgtatgttagcaactcctataggcatttgttaggatacacccacttattttttagaatgtgtgttttagcaagt-tataactaaaaagtagttaaat 3038900  T
Q  235 ac 236  Q
    ||    
T  3038899 ac 3038898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 14369882 - 14369778
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  14369882 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 14369784  T
Q  231 aaatac 236  Q
    ||||||    
T  14369783 aaatac 14369778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 17421777 - 17421705
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  17421777 tttgctagaatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 17421705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 25912109 - 25912174
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  25912109 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 25912174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3960651 - 3960691
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  3960651 gttaataaatacaccttaatgtgtatgttgctataacacac 3960691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17559237 - 17559277
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  17559237 gttaataaatacatcttaaggtgtatgttgctataacacac 17559277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 22282225 - 22282265
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  22282225 gttaataaatacaccttaaggtgtatgctgctataacacac 22282265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 31752231 - 31752128
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||| ||||||||||||||| |  |||| |  |||| ||||||||||||| ||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  31752231 aagtaggtgtatgttagcaactcctataggcatttgctagaatacacccatttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 31752133  T
Q  231 aaata 235  Q
    |||||    
T  31752132 aaata 31752128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 7944403 - 7944340
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||    
T  7944403 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaa 7944340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 12910089 - 12910152
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    ||||| |||||||||||||| |  |||| |  |||| |||||||||||||||||||||||||||    
T  12910089 aagtgagtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaa 12910152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 17209975 - 17210045
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||||||||||   ||||||| ||| | || | |||||||||||| |||||||||||    
T  17209975 tttgctagaatacacccacttatttttt---aggagtattttagcaaatcaataactaaaaaatggttaaatac 17210045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 39548912 - 39549010
Alignment:
Q  136 ggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    ||||||||||||||| || ||||    |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| ||||||||    
T  39548912 ggtgtatgttagcaacttctatagccatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaata 39549010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 4083853 - 4083788
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||| |||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  4083853 aagtgggtgtacgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 4083788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 39038634 - 39038569
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||| ||||||||||| |  ||||||  |||| ||| ||| |||||||||||||||||||||    
T  39038634 aagtgggtctatgttagcaactcctatatgcatttgctaggatatacccacttattttttagaagg 39038569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 1807565 - 1807525
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| | ||| |||||||||||||||||||||||    
T  1807565 gttaataaatatatcttaaggtgtatgttgctataacacac 1807525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30667594 - 30667634
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| | || ||||||||||||||||||||    
T  30667594 gttaataaatacaccataagatgtatgttgctataacacac 30667634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 33026401 - 33026361
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  33026401 gttaataaatacatcttaatgtgtatgttgctataacacac 33026361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 37468703 - 37468667
Alignment:
Q  80 ataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||||| |||||||| |||||||||||    
T  37468703 ataaatacaccttgagttgtatgtttctataacacac 37468667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 4e-31; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 7521539 - 7521379
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          |||||||||||||  |||||| |  |||| |  |||||||||||||    
T  7521539 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtattctagcaaatcctataggcatttgttagaatac 7521440  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| || || ||| | |||||||||||||||||||||||||||||    
T  7521439 acccacttattttttagaaagaatattttagcaagtgaataactaaaaagtggttaaatac 7521379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 233
Target Start/End: Complemental strand, 37504721 - 37504565
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  ||||    |||||||||||||    
T  37504721 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctatagacatttgttagaatac 37504623  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  37504622 acccacttattttttagaaggagtattttagaaagtgaataactaaaaagtggttaaa 37504565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 6114962 - 6114802
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  ||||    |||| ||||||||    
T  6114962 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctatagacatttgctagaatac 6114863  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  6114862 acccacttattttttagaaggagtattttagcaagtaaataactaaaaagtggttaaatac 6114802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 6748664 - 6748823
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  6748664 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataagcatttgctagaatac 6748762  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  6748763 acccacttcttttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 6748823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 7848707 - 7848548
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  7848707 gttaataaatacaccttaaggtgtacgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 7848609  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  7848608 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 7848548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 21727826 - 21727666
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  || | |  |||| ||||||||    
T  21727826 gttaataaatacaccttaaggtgtatgttgctataacacaccttataaaaaaagcaagtgggtgtgttctagcaaatcctacaggcatttgctagaatac 21727727  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||| ||||||||||||||||||||||||    
T  21727726 acccacttattttttagaaggagtattttagcaagtaaataactaaaaagtggttaaatac 21727666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 51148026 - 51148185
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||| |  |||||| |  |||| |  |||| |||||  |    
T  51148026 gttaataaatacaccttaaggtgtatgttgctataacacactttctaaaagaaacaagtgggtgtgttctagcaaatcctata-gaatttgctagaacgc 51148124  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||    
T  51148125 acccacttattttttagaatgagtattttagtaagtgaataactaaaaagtggttaaatac 51148185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 6109178 - 6109338
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||||| || ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  6109178 gttaataaatacactttaaggtgtatgttgctataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaatcatataggcatttgctagaatac 6109277  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||| ||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  6109278 acccatttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 6109338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 12896818 - 12896658
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  12896818 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 12896719  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||| ||||||||| ||| | |||||||||||||||||||||||||||||    
T  12896718 acccacttaatttttggaaggagtattttagcaagtgaataactaaaaagtggttaaatac 12896658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 26158254 - 26158406
Alignment:
Q  84 atacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccactt 183  Q
    ||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||||| ||||    
T  26158254 atacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatacacctactt 26158353  T
Q  184 attttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  26158354 attttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 26158406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 47461875 - 47461715
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  47461875 gttaataaatacaccttaaggtgtatgttgctataacacaccttctattaaaattaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 47461776  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  47461775 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 47461715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 8815510 - 8815353
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| | ||||||| |  |||| |  |||| |||||||||    
T  8815510 ttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttttagcaaatcctataggcatttgctagaataca 8815412  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    || |||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||    
T  8815411 cctacttattttt-agaaggagtattttcgcaagtgaataactaaaaagtggttaaatac 8815353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 994822 - 994895
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  994822 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 994895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 4043722 - 4043649
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  4043722 tttgctagaatacaccaacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 4043649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 11460244 - 11460171
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||| |||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  11460244 tttgctagaatgcacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 11460171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 17226275 - 17226348
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||||||||||||||| | || ||| | |||||||||||||||||||||||||||||    
T  17226275 tttgctagaatacacccacttattttttagaagaaatattttagcaagtgaataactaaaaagtggttaaatac 17226348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 45059633 - 45059706
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  45059633 tttgctaggatacacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 45059706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 172 - 236
Target Start/End: Original strand, 26152307 - 26152371
Alignment:
Q  172 atacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  26152307 atacacccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 26152371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 3544416 - 3544309
Alignment:
Q  130 caagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttatttttt-agaaggagtaatttggtaagtgaataactaaaaagtgg 228  Q
    |||||||||||||  |||||| | ||||| |  |||| ||||||||||||||||||||||| |||||||||| ||| | ||||||| || ||||||||||    
T  3544416 caagtgggtgtattctagcaaatcttataggcatttgctagaatacacccacttatttttttagaaggagtattttagcaagtgaagaattaaaaagtgg 3544317  T
Q  229 ttaaatac 236  Q
    ||||||||    
T  3544316 ttaaatac 3544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 173 - 236
Target Start/End: Complemental strand, 27800548 - 27800485
Alignment:
Q  173 tacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  27800548 tacacccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 27800485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 171 - 236
Target Start/End: Complemental strand, 38798064 - 38797999
Alignment:
Q  171 aatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||| ||||||||||||||||||||||| |||   |||||||||||||||||||||||||||||    
T  38798064 aatacatccacttattttttagaaggagtattttaacaagtgaataactaaaaagtggttaaatac 38797999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 51952383 - 51952222
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| || |||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  51952383 gttaataaatacaccttaagatgtatgttgctataacacaccttctaaaaaaaataagtgggtgtgttctagcaaatcctataggcatttgctagaatac 51952284  T
Q  176 acccacttatttttt-agaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||| |||||||||| ||| | |||||||||||||||||  ||||||||||    
T  51952283 acccacttatttttttagaaggagtattttagcaagtgaataactaaaaataggttaaatac 51952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 172 - 236
Target Start/End: Complemental strand, 27728276 - 27728212
Alignment:
Q  172 atacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||| |||||||||||| || ||| | |||||||||||||||||||||||||||||    
T  27728276 atacacccacttagtttttagaaggaatattttagcaagtgaataactaaaaagtggttaaatac 27728212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 995128 - 995202
Alignment:
Q  163 tttgttagaatacacccacttatttt-ttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||| ||||||||||| |||||||||||| ||| | || ||||||||||||||||||||||||||    
T  995128 tttgctagaatacaaccacttatttttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 2868264 - 2868337
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||||||||||||| ||||  ||| | |||||||||| ||||||||||||||||||    
T  2868264 tttgctaggatacacccacttattttttagaatgagtgttttagcaagtgaataaataaaaagtggttaaatac 2868337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 17065820 - 17065747
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||  ||||||||||||||||||||||||| ||| | || |||||||||||||| |||||||||||    
T  17065820 tttgctagaatgtacccacttattttttagaaggagtattttagcaaatgaataactaaaaaatggttaaatac 17065747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 194
Target Start/End: Complemental strand, 32203273 - 32203210
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    |||||||||||||||||||| | ||||| |  |||| |||||||||||||||||||||||||||    
T  32203273 aagtgggtgtatgttagcaactcttataggcatttgctagaatacacccacttattttttagaa 32203210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 8814898 - 8814833
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| || |||| |  |||| ||||||||||||||||||||||| |||||    
T  8814898 aagtgggtgtatgttagcaacttctataagcatttgctagaatacacccacttatttttttgaagg 8814833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 34277553 - 34277621
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagta 200  Q
    |||||||||||||||||||| |  ||||   |||||| ||||||||||||||||||||||||||||||||    
T  34277553 aagtgggtgtatgttagcaactcctatagacgtttgt-agaatacacccacttattttttagaaggagta 34277621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 4043816 - 4043776
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4043816 gttaataaatacaccttaaggtgtatgttgctataacacac 4043776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 11460330 - 11460290
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11460330 gttaataaatacaccttaaggtgtatgttgctataacacac 11460290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 17226216 - 17226256
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  17226216 gttaataaatacaccttaaggtgtatgttgctataacacac 17226256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 26152524 - 26152564
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  26152524 gttaataaatacaccttaaggtgtatgttgctataacacac 26152564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30347788 - 30347828
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  30347788 gttaataaatacaccttaaggtgtatgttgctataacacac 30347828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 13349255 - 13349151
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |   ||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  13349255 aagtgggtgtatgttagcaactccaataggcatttgctaggatacacccacttattttttagaaggcgtgttttagcaagt-tataactaaaaagtagtt 13349157  T
Q  231 aaatac 236  Q
    ||||||    
T  13349156 aaatac 13349151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 17605593 - 17605528
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||| |||||||||||| |  ||||||  |||| ||| |||||||||||||||||||||||||    
T  17605593 aagtgggggtatgttagcaactcctatatgcatttgctaggatacacccacttattttttagaagg 17605528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 21408611 - 21408656
Alignment:
Q  191 agaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||    
T  21408611 agaaggagtattttagcaagtgaataactaaaaagtggttaaatac 21408656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 53467455 - 53467527
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  53467455 tttgctagaatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 53467527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 994736 - 994776
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||||| |||||||||||||    
T  994736 gttaataaatacaccttaaggtgtatgctgctataacacac 994776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 995042 - 995082
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  995042 gttaataaatacaccttaaggtgtatgttgctgtaacacac 995082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 3269247 - 3269287
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  3269247 gttaataaatacaccttaagatgtatgttgctataacacac 3269287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 26152211 - 26152251
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  26152211 gttaataaatataccttaaggtgtatgttgctataacacac 26152251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27728374 - 27728334
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  27728374 gttaataaatacatcttaaggtgtatgttgctataacacac 27728334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 27317759 - 27317657
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||| |||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  27317759 aagtgggtgtatgttagcaactcctataggcatttgctagaatacatccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 27317661  T
Q  231 aaat 234  Q
    ||||    
T  27317660 aaat 27317657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 29950668 - 29950609
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttatttttt 190  Q
    |||||||||||||||| |||||  |||| |  |||| |||||||||||||||||||||||    
T  29950668 aagtgggtgtatgttaccaagtgatataggcatttgatagaatacacccacttatttttt 29950609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 29999822 - 29999763
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttatttttt 190  Q
    |||||||||||||||| |||||  |||| |  |||| |||||||||||||||||||||||    
T  29999822 aagtgggtgtatgttaccaagtgatataggcatttgatagaatacacccacttatttttt 29999763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 236
Target Start/End: Complemental strand, 50801688 - 50801590
Alignment:
Q  137 gtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  50801688 gtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 50801590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 50874192 - 50874290
Alignment:
Q  137 gtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  50874192 gtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 50874290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 12127661 - 12127596
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||  ||| |||||||||||||||||||||||||    
T  12127661 aagtgggtgtatgttagcaactcctataggcattttctaggatacacccacttattttttagaagg 12127596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 31039629 - 31039733
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    ||||| |||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||  ||  ||| | ||||  ||||||||||||| |||    
T  31039629 aagtgcgtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagatgtgttttagcaagt-tataactaaaaagtagtt 31039727  T
Q  231 aaatac 236  Q
    ||||||    
T  31039728 aaatac 31039733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 48649474 - 48649433
Alignment:
Q  76 gttaataaatacacctt-gaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| ||||||||||||||||||||||||    
T  48649474 gttaataaatacatctttgaggtgtatgttgctataacacac 48649433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 53581679 - 53581575
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  ||||    |||| ||  ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  53581679 aagtgggtgtatgttagcaactcctatagacatttgctaagatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 53581581  T
Q  231 aaatac 236  Q
    ||||||    
T  53581580 aaatac 53581575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27800627 - 27800587
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  27800627 gttaataaatacatcttaaagtgtatgttgctataacacac 27800587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 45059546 - 45059586
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| || ||||||||| ||||||||||    
T  45059546 gttaataaatacaccttaagatgtatgttgttataacacac 45059586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 52654495 - 52654455
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||| || |||| ||||||||||||||||||    
T  52654495 gttaataaatacactttaaggtatatgttgctataacacac 52654455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 39906293 - 39906453
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  39906293 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 39906392  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  39906393 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 39906453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 7682029 - 7682187
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||||||           |||||||||||| ||||||| |  |||| |  |||| ||||||||    
T  7682029 gttaataaatacaccttaaggtgtatgttgctataacacactttctaaaaaaag-aagtgggtgtattttagcaaatcctataggcatttgctagaatac 7682127  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||| |||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  7682128 acccactt-ttttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 7682187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 4293228 - 4293387
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| || |||| || |||| ||||||||    
T  4293228 gttaataaatacaccttaaggtgtatgttgctataacacacattc-taaaaaaacaagtgggtgtgttatagcaaattatataggtatttgctagaatac 4293326  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | || | ||||||||||||||| ||||||||    
T  4293327 acccacttattttttagaaggagtattttagcaaatcaataactaaaaagtgattaaatac 4293387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 9689399 - 9689559
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          |||||| ||||||  |||||| |  |||| |  |||| ||| ||||    
T  9689399 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaacaagtgagtgtattctagcaaatcctataggcatttgctaggatac 9689498  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | |||||||| ||||||||||||||||||||    
T  9689499 acccacttagtttttagaaggagtattttagcaagtgaattactaaaaagtggttaaatac 9689559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 20939734 - 20939893
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| || || ||||||||||||||||||||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  20939734 gttaataaatacaccttaagatgcatgttgctataacacactttc-taaataaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 20939832  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  20939833 acccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 20939893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 3769550 - 3769477
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||| ||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  3769550 tttgctagaacacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 3769477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 33173595 - 33173522
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  33173595 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 33173522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 44257642 - 44257481
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacaca-cttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaata 174  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |         ||||||||||| |  || ||| | ||||| |  |||| |||||||    
T  44257642 gttaataaatacaccttaaggtgtatgttgctataacacatcttctaaaaaaaagcaagtgggtgtgttctaacaaatcttataggcatttgctagaata 44257543  T
Q  175 cacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||| ||||| ||| | ||||||||||||||||| ||||| |||||    
T  44257542 cacccacttattttttagaatgagtattttagcaagtgaataactaaaaaatggttcaatac 44257481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 9690182 - 9690341
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          |||||| |||| |  |||||| | ||||| |  |||| ||||||||    
T  9690182 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-ttaaaaaacaagtgagtgtgttctagcaaatcttataggcatttgctagaatac 9690280  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| |||   || | ||||||||||||||||||||||||    
T  9690281 acccacttattttttagaaggagtattttaacaaatcaataactaaaaagtggttaaatac 9690341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 39904837 - 39904677
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||||| || || |||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  39904837 gttaataaatacactttaagatgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 39904738  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| ||| | |||||||||| ||||||||||||||||||    
T  39904737 acccacttattttttagaatgagtattttagcaagtgaataattaaaaagtggttaaatac 39904677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 44543031 - 44542872
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  44543031 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 44542933  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||| |||||||||  |||||||||||||    
T  44542932 acccacttattttttagaaggagtattttagcaagtaaataactaaggagtggttaaatac 44542872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 22302088 - 22302161
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  22302088 tttgctagaatacacccacttattgtttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 22302161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 22711143 - 22711216
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||| ||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||||    
T  22711143 tttgctagaatacatccacttattttttagaaggagtattttagtaaataaataactaaaaagtggttaaatac 22711216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 324980 - 325071
Alignment:
Q  145 tagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||| ||||||| |  |||| ||||||||||| ||||||||||||||||||||| |||   || ||||||||||||||||||||||||||    
T  324980 tagcaaattttataggcatttgctagaatacaccaacttattttttagaaggagtattttaacaaatgaataactaaaaagtggttaaatac 325071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 2586477 - 2586404
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| | || |||||||| |||||||||||||||||    
T  2586477 tttgctagaatacacctacttattttttagaaggagtattttagcaaatgaataacaaaaaagtggttaaatac 2586404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 6332386 - 6332459
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||||||||||| |||||||| ||| | || |||||||||||||||| |||||||||    
T  6332386 tttgctagaatacacccacttattttttaaaaggagtattttagcaaatgaataactaaaaagtagttaaatac 6332459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 15554132 - 15554205
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||  ||||||||    
T  15554132 tttgttagaatacacccacttattttttagaatgagtattttagcaaatgaataactaaaaagttattaaatac 15554205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 30406485 - 30406644
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |   ||| || |||||    
T  30406485 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-ttaaaaaacaagtgggtgtgttctagcaaatcctataggcacttgctacaatac 30406583  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||| |||||| ||| | || | ||||||||||||||||||||||||    
T  30406584 acccacttattttttagatggagtattttagcaaatcaataactaaaaagtggttaaatac 30406644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 38987142 - 38986982
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||||| || ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  38987142 gttaataaatacactttaaggtgtatgttgctataacacaccttctacaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 38987043  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    | |||||||  |||||||||||||| |||   ||||||||||||||||| |||||||||||    
T  38987042 atccacttacattttagaaggagtattttaacaagtgaataactaaaaattggttaaatac 38986982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 13002152 - 13002048
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||| ||||||||||||||| |  |||| |  |||| || ||||||||| |||||||||||||||||||  ||| | ||||| |||||||||||||||||    
T  13002152 aagtaggtgtatgttagcaactcctataggcatttgctaaaatacaccctcttattttttagaaggagtgttttagcaagtg-ataactaaaaagtggtt 13002054  T
Q  231 aaatac 236  Q
    ||||||    
T  13002053 aaatac 13002048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 3769747 - 3769707
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  3769747 gttaataaatacaccttaaggtgtatgttgctataacacac 3769707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 23234130 - 23234075
Alignment:
Q  181 cttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||| ||| ||| | || ||||||||||||||||||||||||||    
T  23234130 cttattttttagaaggggtactttagcaaatgaataactaaaaagtggttaaatac 23234075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 1750314 - 1750217
Alignment:
Q  136 ggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    ||||||||||||||| |  || |||  |||| ||||||||||||||||| ||||||||||| ||  ||| ||||||  ||||||||||||| |||||||    
T  1750314 ggtgtatgttagcaactcctacatgcatttgctagaatacacccacttaatttttagaaggtgtgttttagtaagt-tataactaaaaagtagttaaat 1750217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 2586561 - 2586523
Alignment:
Q  78 taataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  2586561 taataaatacaccttaaggtgtatgttgctataacacac 2586523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 17265367 - 17265404
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagta 200  Q
    |||| |||||||||||||||||||||||||||||||||    
T  17265367 tttgctagaatacacccacttattttttagaaggagta 17265404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 33739611 - 33739676
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||| |||||||||||||||||||    
T  33739611 aagtgggtgtatgttagcaactcctataggcatttgctagaatacatccacttattttttagaagg 33739676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 34082631 - 34082735
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||| ||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  34082631 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccatttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 34082729  T
Q  231 aaatac 236  Q
    ||||||    
T  34082730 aaatac 34082735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 1297614 - 1297654
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| ||||| |||||||||||||||||||||||    
T  1297614 gttaataaataaaccttaaggtgtatgttgctataacacac 1297654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 6332300 - 6332340
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  6332300 gttaataaatacaccttaaggtgtaagttgctataacacac 6332340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 8386766 - 8386822
Alignment:
Q  134 tgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttatttttt 190  Q
    ||||||||||||||||| |  ||||||  |||| |||||||||||||||||||||||    
T  8386766 tgggtgtatgttagcaactcctatatgcatttgctagaatacacccacttatttttt 8386822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 22711057 - 22711097
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  22711057 gttaataaatacaccttaaggtgtatgttgctgtaacacac 22711097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 8741623 - 8741677
Alignment:
Q  181 cttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    |||| ||||||  ||||||| ||| | ||||||||||||||||||||||||||||    
T  8741623 cttaatttttaagaggagtattttagcaagtgaataactaaaaagtggttaaata 8741677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 11675216 - 11675321
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccactta-ttttttagaaggagtaatttggtaagtgaataactaaaaagtggt 229  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||| |||||||||||| ||  ||| | ||||  ||||||||||||| ||    
T  11675216 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttatttttttagaaggtgtgttttagcaagt-tataactaaaaagtagt 11675314  T
Q  230 taaatac 236  Q
    |||||||    
T  11675315 taaatac 11675321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 16513201 - 16513140
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttag 192  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||    
T  16513201 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttag 16513140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 18370296 - 18370361
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||||||||| || | |||||    |||| ||| |||||||||||||||||||||||||    
T  18370296 aagtgggtgtatgttagaaactcttatagtcatttgctaggatacacccacttattttttagaagg 18370361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15554046 - 15554086
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  15554046 gttaataaatacatcttaaggtgtatgttcctataacacac 15554086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 33173680 - 33173640
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| ||||| | |||||||||||||||||||||    
T  33173680 gttaataaataaaccttaatgtgtatgttgctataacacac 33173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 29646400 - 29646241
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| |||||||||    
T  29646400 ttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaataca 29646301  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  29646300 cccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 29646241  T

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Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 15962750 - 15962910
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| || |||| |  |||  ||||||||    
T  15962750 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaattctataggcattttctagaatac 15962849  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||||||||||||    
T  15962850 acccacttattttttagaatgagtattttagcaagtgtataactaaaaagtggttaaatac 15962910  T

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Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 31132889 - 31133049
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||||| |||||||| ||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  31132889 gttaataaatacaccttaaggtgtatattgctatagcacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 31132988  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  31132989 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 31133049  T

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Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 8172059 - 8171901
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||||||          ||||||||||| |  |||||| | ||||| |  |||| |||||||||    
T  8172059 ttaataaatacaccttaaggtgtatgttgctataacacactttc-taaaaaaacaagtgggtgtgttctagcaaatcttataggcatttgctagaataca 8171961  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||| ||| | || | |||||||||| |||||||||||||    
T  8171960 cccacttattttttagaaggagtattttagcaaataaataactaaacagtggttaaatac 8171901  T

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Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 27828411 - 27828484
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  27828411 tttgttagaatacacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 27828484  T

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Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 11100393 - 11100553
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  11100393 gttaataaatacaccttaaggtgtatgttgctataacacatcttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 11100492  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  11100493 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 11100553  T

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Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 162 - 236
Target Start/End: Original strand, 20755454 - 20755528
Alignment:
Q  162 gtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||| |||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  20755454 gtttgctagaatacacgcacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 20755528  T

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Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 4184359 - 4184432
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  4184359 tttgctagaatacaccaacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 4184432  T

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Target: chr6; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 9955808 - 9955968
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||| ||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  9955808 gttaataaatacaccttaaggtgtacgttgctataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 9955907  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| |||   || ||||||||||||||||||||||||||    
T  9955908 acccacttattttttagaaagagtattttaacaaatgaataactaaaaagtggttaaatac 9955968  T

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Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 224
Target Start/End: Original strand, 26667878 - 26668026
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||| ||| || ||||||||| |||||||||| ||          ||||||||||| |  |||||| || |||| |  |||||||||||||    
T  26667878 gttaataaatacatcttaagatgtatgttgttataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaattctataggcatttgttagaatac 26667977  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaa 224  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  26667978 acccacttattttttagaaggagtattttagtaagtgtataactaaaaa 26668026  T

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Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 1369998 - 1370071
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  1369998 tttgctagaatacatccatttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 1370071  T

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Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 16599174 - 16599232
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagt 226  Q
    ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  16599174 tagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagt 16599232  T

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Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 10778043 - 10778116
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||  ||||||||||||||| ||| | |||||||||||||||||||| ||||||||    
T  10778043 tttgctaggatacacccacttggtttttagaaggagtattttagcaagtgaataactaaaaagtgtttaaatac 10778116  T

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Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 5187869 - 5187942
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||  ||||| |||   || ||||||||||||||||| ||||||||    
T  5187869 tttgctagaatacacccacttattttttagattgagtattttaacaaatgaataactaaaaagtgattaaatac 5187942  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 14488425 - 14488321
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    ||||| |||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  14488425 aagtgagtgtatgttagcaactcatataggcatttgctagaatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 14488327  T
Q  231 aaatac 236  Q
    ||||||    
T  14488326 aaatac 14488321  T

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Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 5187783 - 5187823
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  5187783 gttaataaatacaccttaaggtgtatgttgctataacacac 5187823  T

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Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 11210310 - 11210350
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  11210310 gttaataaatacaccttaaggtgtatgttgctataacacac 11210350  T

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Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15881939 - 15881979
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  15881939 gttaataaatacaccttaaggtgtatgttgctataacacac 15881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 16599082 - 16599122
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  16599082 gttaataaatacaccttaaggtgtatgttgctataacacac 16599122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 24022922 - 24022882
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  24022922 gttaataaatacaccttaaggtgtatgttgctataacacac 24022882  T

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Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 35002070 - 35002030
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  35002070 gttaataaatacaccttaaggtgtatgttgctataacacac 35002030  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 10196649 - 10196610
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacaca 115  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  10196649 gttaataaatacaccttaaggtgtatgttgctataacaca 10196610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 10315307 - 10315376
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtg-aataactaaaaagtggttaaatac 236  Q
    |||||||||| |||||||||||||||||||||| ||| | || || ||||||||||| || |||||||||    
T  10315307 tagaatacactcacttattttttagaaggagtattttagcaaatgaaataactaaaaggttgttaaatac 10315376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 1369912 - 1369952
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  1369912 gttaataaatacaccttaaggtgtatgttgcgataacacac 1369952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 10777956 - 10777996
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| || ||||||||||||||||||||    
T  10777956 gttaataaatacaccttaagatgtatgttgctataacacac 10777996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 4898512 - 4898575
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||    
T  4898512 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaa 4898575  T

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Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 111
Target Start/End: Original strand, 27828320 - 27828355
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataa 111  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27828320 gttaataaatacaccttaaggtgtatgttgctataa 27828355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 194
Target Start/End: Original strand, 30525420 - 30525483
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaa 194  Q
    |||||||||||||||||||| |  |||| |  |||| |||||||||| ||||||||||||||||    
T  30525420 aagtgggtgtatgttagcaactcctataggcatttgctagaatacactcacttattttttagaa 30525483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 33730616 - 33730546
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    |||| ||||||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||    
T  33730616 tttgctagaatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaat 33730546  T

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Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 26211348 - 26211414
Alignment:
Q  134 tgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagta 200  Q
    ||||||||||||||||| | || || |  |||| ||||||||||| |||||||||||||||| ||||    
T  26211348 tgggtgtatgttagcaattcttgtaggcatttgctagaatacacctacttattttttagaagaagta 26211414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 15718335 - 15718270
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||| |||||||| |  |||| |  |||||||||||||| |||||||| ||||||||||    
T  15718335 aagtgggtgtaagttagcaactcctataggcatttgttagaatacatccacttatattttagaagg 15718270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 15882030 - 15882058
Alignment:
Q  208 aagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||    
T  15882030 aagtgaataactaaaaagtggttaaatac 15882058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 12584298 - 12584458
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||||| || ||||||||||||||||||||||| ||          ||||||||| | |  |||||| || |||| |  |||| ||||||||    
T  12584298 gttaataaatacactttaaggtgtatgttgctataacacaccttctaaaaaaaacaagtgggtatgttctagcaaattctataggcatttgctagaatac 12584397  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  12584398 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 12584458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 5157202 - 5157044
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||| ||||||| |  |||||| |  |||| |  |||| |||||||||    
T  5157202 ttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaaatgggtgtgttctagcaaatcctataggcctttgctagaataca 5157104  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5157103 cccacttattttttagaaggagtattttagtaagtgaataactaaaaagtggttaaatac 5157044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 18470376 - 18470303
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  18470376 tttgttagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 18470303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 3818863 - 3818790
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  3818863 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 3818790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 13212020 - 13211861
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  13212020 gttaataaatacaccttaatgtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 13211922  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||    
T  13211921 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggtcaaatac 13211861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 42807923 - 42808083
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  42807923 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaataagtgggtgtgttctagcaaatcctataggcatttgctaggatac 42808022  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  42808023 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 42808083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 49970799 - 49970641
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| |           ||||||||||| | ||||||| |  |||| |  |||| ||||||||    
T  49970799 gttaataaatacaccttaaggtgtatgttgctataacacacctac-taaaaaaacaagtgggtgtgt-ttagcaaatcctataggcatttgctagaatac 49970702  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  49970701 acccacttattttttagaaggagtattttagaaaatgaataactaaaaagtggttaaatac 49970641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 10216264 - 10216414
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  10216264 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 10216362  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtg 227  Q
    ||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  10216363 acccacttattttttagaaggagtattttagcaagtgaataactaaaaagtg 10216414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 5046739 - 5046812
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||    
T  5046739 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaaatggttaaatac 5046812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 41172529 - 41172456
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  41172529 tttgctagaatacacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 41172456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 50182378 - 50182221
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| || ||||||||||||||||||||  ||         ||||||||||| |  ||||||   ||||| |  |||||||||||||    
T  50182378 gttaataaatacaccttaagttgtatgttgctataacacac-cttctaaaaaaacaagtgggtgtgttctagcaa--attataggcatttgttagaatac 50182282  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    || ||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||||    
T  50182281 actcacttattttttagaagcagtattttagcaagtgaataactaaaaagtggttaaatac 50182221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 6214189 - 6214029
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||||||||||||||||||||  |          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  6214189 gttaataaatacaccttaaggtgtatgttgctataacacaccctctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 6214090  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| |||||||||| |||| ||| | |||||||||||||||||||||||||||||    
T  6214089 acccacttagtttttagaagaagtattttagcaagtgaataactaaaaagtggttaaatac 6214029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 7630263 - 7630103
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||||| |||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  7630263 gttaataaatacaccttaaggtgtatattgctataacacaccttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 7630164  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||  |||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  7630163 acccacttagattttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 7630103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 13371416 - 13371257
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  13371416 gttaataaatacaccttaatgtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 13371318  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    | |||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  13371317 aaccacttatgttttagaaggagtattttagtaagtgaataactaaaaagtggtaaaatac 13371257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 13381617 - 13381458
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  13381617 gttaataaatacaccttaatgtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 13381519  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    | |||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  13381518 aaccacttatgttttagaaggagtattttagtaagtgaataactaaaaagtggtaaaatac 13381458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 14202882 - 14203042
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| || |||||||||||||||||||| ||          |||||| |||| |  |||||| |  |||| |  |||| ||||||||    
T  14202882 gttaataaatacaccttaagatgtatgttgctataacacaccttctaaaaaaagcaagtgagtgtgttctagcaaatcctataggcatttgctagaatac 14202981  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| ||||| ||| | ||||| |||||||||||||||||||||||    
T  14202982 acccacttattttttagaatgagtattttagcaagtggataactaaaaagtggttaaatac 14203042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 21519937 - 21519777
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||         ||||||||||| |  ||| || |  |||| |  |||| ||||||||    
T  21519937 gttaataaatacaccttaaggtatatgttgctataacacaccttttaaaaaaaacaagtgggtgtgttctagtaaatcctataggcatttgctagaatac 21519838  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||| |||| ||| | || | ||||||||||||||||||||||||    
T  21519837 acccacttattttttagaagaagtattttagcaaatcaataactaaaaagtggttaaatac 21519777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 10981367 - 10981473
Alignment:
Q  130 caagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggt 229  Q
    ||||||||||| |  || ||| ||||||| |  |||| ||||||||| ||||||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  10981367 caagtgggtgtgttctaacaaattttataggcatttgctagaatacatccacttattttctagaaggagtattttagcaagtgaataactaaaaagtggt 10981466  T
Q  230 taaatac 236  Q
    |||||||    
T  10981467 taaatac 10981473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 578858 - 578931
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||||||||||||    
T  578858 tttgctagaatacacccacttattttttagaatgagtattttagcaaatgaataactaaaaagtggttaaatac 578931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 13621413 - 13621486
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  13621413 tttgctaggatacacccacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 13621486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 17181069 - 17180996
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  17181069 tttgctagaatacacccacttattttttagaaggagtatttttgcaatttaataactaaaaagtggttaaatac 17180996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 48560117 - 48560044
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  48560117 tttgctagaatacacccacttattttttagaaggagtattttagcaatttaataactaaaaagtggttaaatac 48560044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 13621303 - 13621144
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  13621303 gttaataaatactccttaaggtgtatgttgctataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 13621204  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||| ||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  13621203 acc-acttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaatac 13621144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 17745262 - 17745194
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||| |||||||||||||||||| ||| | ||||||||||||||||| |||||||||||    
T  17745262 tagaatacacccacctattttttagaaggagtattttagcaagtgaataactaaaaaatggttaaatac 17745194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 45801926 - 45801850
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataac---taaaaagtggttaaatac 236  Q
    |||||||||||||| ||||||||||||||||||||||| ||| | |||||||||||   ||||||||||||||||||    
T  45801926 tttgttagaatacatccacttattttttagaaggagtattttagcaagtgaataactaataaaaagtggttaaatac 45801850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 17377699 - 17377551
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| | ||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  17377699 gttaataaatacaccttaaagtgtatgttgctataacacaccttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcttttgctaggatac 17377600  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaa 224  Q
    ||||||||| ||||||||||||||| ||| | |||||||||||||||||    
T  17377599 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaa 17377551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 34683060 - 34683220
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||| ||||||| ||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  34683060 gttaacaaatacagcttaaggtgtatgttgctataacacaccttctaacaaaaacaagtgggtgtgttctagcaaatcatataggcatttgctaggatac 34683159  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  34683160 acccacttagtttttagaaggagtattttagcaattaaataactaaaaagtggttaaatac 34683220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 6137578 - 6137680
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||||| ||  ||| ||||||  ||||||||||||| |||    
T  6137578 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaaggtgtgttttagtaagt-tataactaaaaagtagtt 6137676  T
Q  231 aaat 234  Q
    ||||    
T  6137677 aaat 6137680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 30820587 - 30820661
Alignment:
Q  163 tttgttagaatacacccacttatttt-ttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||| ||||||||||||||| |||||||||||| |||   |||||||||||||||||||||||||||||    
T  30820587 tttgctagaagacacccacttatttttttagaaggagtattttaccaagtgaataactaaaaagtggttaaatac 30820661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 51783981 - 51784142
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||         ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  51783981 gttaataaatacaccttaaggtgtatgttgctataacacac-cttctaaataaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 51784079  T
Q  176 accc-acttattttttagaa-ggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||| |||||| ||| |||| | ||||||||||||||| ||||||||    
T  51784080 accctacttattttttagaagggagtattttagtaaataaataactaaaaagtgattaaatac 51784142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 26335873 - 26335769
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||||||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  26335873 aagtgggtgtatgttagcaactcctataggcatttgttaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 26335775  T
Q  231 aaatac 236  Q
    ||||||    
T  26335774 aaatac 26335769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 30258225 - 30258286
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaa 224  Q
    |||| ||||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||    
T  30258225 tttgctagaatacacccacttattttttagaatgagtattttagcaaatgaataactaaaaa 30258286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 52437537 - 52437609
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||| ||||||||||||||||||||||||| ||  ||| | ||||  |||||||||||||||||||||||    
T  52437537 tttgttaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtggttaaatac 52437609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17745351 - 17745311
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  17745351 gttaataaatacaccttcaggtgtatgttgctataacacac 17745311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 26958742 - 26958702
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  26958742 gttaataaatacaccttaaggtgtatgttgctataacacac 26958702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 30820501 - 30820541
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  30820501 gttaataaatacaccttaaggtgtatgttgctataacacac 30820541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 30258139 - 30258177
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacac 114  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  30258139 gttaataaatacaccttaaggtgtatgttgctataacac 30258177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 6946777 - 6946673
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||  ||  ||| | ||||  ||||||||||||| |||    
T  6946777 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagatgtgttttagcaagt-tataactaaaaagtagtt 6946679  T
Q  231 aaatac 236  Q
    ||||||    
T  6946678 aaatac 6946673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 23384002 - 23384067
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  23384002 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 23384067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 5046653 - 5046693
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| | |||||||||||||||||||||    
T  5046653 gttaataaatacaccttaaagtgtatgttgctataacacac 5046693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 11777578 - 11777669
Alignment:
Q  134 tgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagt 226  Q
    ||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| ||||||  |||||||||||||    
T  11777578 tgggtgtatgttagcaactcctataagcatttgctaggatacacccacttattttttagaaggtgtgttttagtaagt-tataactaaaaagt 11777669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 14863104 - 14863040
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||    
T  14863104 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaag 14863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 15725311 - 15725208
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    ||||| |||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| ||||||  ||||||||||| | |||    
T  15725311 aagtgagtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagtaagt-tataactaaaaaatagtt 15725213  T
Q  231 aaata 235  Q
    |||||    
T  15725212 aaata 15725208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Original strand, 20458912 - 20458976
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||| ||||||||||||||||||||    
T  20458912 aagtgggtgtatgttagcaactcctataggcatttgctagaatatacccacttattttttagaag 20458976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Complemental strand, 3818951 - 3818912
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacaca 115  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  3818951 gttaataaatacaccttaaagtgtatgttgctataacaca 3818912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 194
Target Start/End: Complemental strand, 43639099 - 43639068
Alignment:
Q  163 tttgttagaatacacccacttattttttagaa 194  Q
    ||||||||||||||||||||||||||||||||    
T  43639099 tttgttagaatacacccacttattttttagaa 43639068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 49606144 - 49606086
Alignment:
Q  138 tgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||||  || ||||||  |||| ||| |||||||||||||||||||||||||    
T  49606144 tgtatgttagcagcttctatatgcatttgctaggatacacccacttattttttagaagg 49606086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 9744211 - 9744276
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||| ||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  9744211 aagtgggtgtatattagcaactcctataggcatttgctaggatacacccacttattttttagaagg 9744276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 49425839 - 49425904
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||| |||||||| || |||| |  |||| ||| ||||||| |||||||||||||||||    
T  49425839 aagtgggtgtacgttagcaacttctataggcatttgctaggatacacctacttattttttagaagg 49425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 17181158 - 17181118
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||| ||| |||||||||||| ||||||||||    
T  17181158 gttaataaatacaacttaaggtgtatgttgttataacacac 17181118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 41172615 - 41172575
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||  || |||||||||||||||||||||||    
T  41172615 gttaataaatacattttaaggtgtatgttgctataacacac 41172575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 43639073 - 43639045
Alignment:
Q  167 ttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||||||||||||    
T  43639073 ttagaatacacccacttattttttagaag 43639045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 47382357 - 47382317
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||| ||||| ||||||||||    
T  47382357 gttaataaatacaccttaaggtgtttgttgatataacacac 47382317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 48560203 - 48560163
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||| | ||||||||    
T  48560203 gttaataaatacaccttaaggtgtatgttgttttaacacac 48560163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 6e-27; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 13943359 - 13943432
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  13943359 tttgttagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 13943432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 14387497 - 14387570
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  14387497 tttgctagaatacacccacttattttttagaaggagtattttggcaagtgaataactaaaaagtggttaaatac 14387570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 20411207 - 20411367
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  ||||    |||| ||||||||    
T  20411207 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcctatagtcatttgctagaatac 20411306  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||  || | |||||||||||||||||||||||||||||    
T  20411307 acccacttattttttagaaggagtatcttagcaagtgaataactaaaaagtggttaaatac 20411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 16960294 - 16960452
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| |||||||||    
T  16960294 ttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttatagcaaatcatataggcatttgctagaataca 16960392  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    | |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  16960393 ctcacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 16960452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 32716527 - 32716421
Alignment:
Q  130 caagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggt 229  Q
    ||||||||||| |  |||||| | ||||| |  |||| |||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  32716527 caagtgggtgtgttctagcaaatcttataggcatttgctagaatacacccacttatttttaagaaggagtattttagtaagtgaataactaaaaagtggt 32716428  T
Q  230 taaatac 236  Q
    |||||||    
T  32716427 taaatac 32716421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 234
Target Start/End: Original strand, 36817661 - 36817818
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| |||||||||    
T  36817661 ttaataaatacaccttaaggtgtatgttgctataacacaccttctacaaaaaacaagtgggtgtgttctagcaaatcctataggaatttgctagaataca 36817760  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaat 234  Q
    | |||||||||||||||| ||||| ||| | |||||||||||||||||||||||||||    
T  36817761 cacacttattttttagaatgagtattttagcaagtgaataactaaaaagtggttaaat 36817818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 27255662 - 27255822
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||| ||||||||||| |||         ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  27255662 gttaataaatacaccttaaggtgtatgttactataacacaccttttagaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 27255761  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| |||||||| ||| | |||| ||||||||||||||||||||||||    
T  27255762 accctcttattttttaaaaggagtattttaggaagtaaataactaaaaagtggttaaatac 27255822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 52772256 - 52772415
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacaca-cttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaata 174  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||| |         ||||||||||| |  |||||| | ||||| |  |||| |||||||    
T  52772256 gttaataaatacaccttaaggtgtatgttg-tataacacatcttctaaaaaaaaacaagtgggtgtgttctagcaaatcttataggcatttgctagaata 52772354  T
Q  175 cacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    ||||||||||||||| |||||||||| ||| | ||||||||||||||||||||||||||||    
T  52772355 cacccacttatttttcagaaggagtattttagcaagtgaataactaaaaagtggttaaata 52772415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 14494379 - 14494538
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||  ||          ||||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  14494379 gttaataaatacaccttaaggtgtatgttgctataacacatcttctaacaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctaggatac 14494478  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    ||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||||||||    
T  14494479 acccacttagtttttagaaggagtattttagcaagtgaataactaaaaagtggttaaata 14494538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 27389575 - 27389505
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaa 233  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  27389575 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaa 27389505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 12864465 - 12864307
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| |||||| ||||||||||||||||   |         ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  12864465 gttaataaatacaccttaaggtgtttgttgctataacacac--ctaaaaaaaaacaagtgggtgtgttctagcaaatcatataggcatttgctagaatac 12864368  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||||||    
T  12864367 acccacttattttttaaaaggagtattttagcaagtgaataactaaaaagtggttaaatac 12864307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 39424365 - 39424438
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  39424365 tttgctagaatacaccaacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 39424438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 1805162 - 1805003
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||| ||||||||||||||| |||         ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  1805162 gttaataaatacaccttaaggtgtaagttgctataacacaccttt-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 1805064  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||| |||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  1805063 acccacttatcttttagaaggagtattttagcaaatcaataactaaaaagtggttaaatac 1805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 13385909 - 13385749
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||| ||||    
T  13385909 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaataagtgggtgtgttctagcaaatcctataggcatttgctaggatac 13385810  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||| ||||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  13385809 acccacttagtttttagaaggagtattttagcaattgaataactaaaaagtggttaaatac 13385749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 236
Target Start/End: Complemental strand, 32374713 - 32374554
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| ||||||||||||||||||||||  ||          ||||||||||| |  |||||| |  ||||    |||||||  |||||    
T  32374713 ttaataaatacaccttaaggtgtatgttgctataacacatcttctaacaaaaacaagtgggtgtgttatagcaaatcctatagacatttgttacgataca 32374614  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||| ||| ||||||||||| ||| | |||||||||||||||||||||||||||||    
T  32374613 cccacttagtttgtagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 32374554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 10764728 - 10764623
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| | |||||    |||  ||||||||||||||| ||||||||||||| ||  | | | |||||||||||||||||||||||    
T  10764728 aagtgggtgtatgttagcaactcttatagacattttctagaatacacccactcattttttagaaggtgtgttatagcaagtgaataactaaaaagtggtt 10764629  T
Q  231 aaatac 236  Q
    ||||||    
T  10764628 aaatac 10764623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 236
Target Start/End: Complemental strand, 28094507 - 28094446
Alignment:
Q  175 cacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  28094507 cacccacttatttttaagaaggagtattttagtaaatgaataactaaaaagtggttaaatac 28094446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 43236259 - 43236332
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| |||||||||||||||||||||||| |||| ||| | ||||| |||||||||||||||||||||||    
T  43236259 tttgctaggatacacccacttattttttagaagaagtattttagcaagtggataactaaaaagtggttaaatac 43236332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 47131089 - 47130929
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           |||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  47131089 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaaaaaaat-aagtgggtgtgttctagcaaatcctataggcatttgctagaatac 47130991  T
Q  176 acccacttatttttt-agaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||| |||||||||| ||| | || | ||||||||||||||||||||||||    
T  47130990 acccacttatttttttagaaggagtattttagcaaatcaataactaaaaagtggttaaatac 47130929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 32144057 - 32144130
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaattt 204  Q
    |||||||||||||||||||| | |||||||  |||| | | ||||||||||||||||||||||||| |||||||    
T  32144057 aagtgggtgtatgttagcaactcttatatgcatttgctgggatacacccacttattttttagaaggtgtaattt 32144130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 34515196 - 34515300
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  ||||||||||||||||||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  34515196 aagtgggtgtatgttagcaactcctataggcatttgttagaatacacccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 34515294  T
Q  231 aaatac 236  Q
    ||||||    
T  34515295 aaatac 34515300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 27787867 - 27787970
Alignment:
Q  132 agtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtta 231  Q
    ||||||||||||||||||| | ||||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| ||||    
T  27787867 agtgggtgtatgttagcaactcttataggaatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtta 27787965  T
Q  232 aatac 236  Q
    |||||    
T  27787966 aatac 27787970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 463378 - 463482
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  463378 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 463476  T
Q  231 aaatac 236  Q
    ||||||    
T  463477 aaatac 463482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 16005694 - 16005590
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  16005694 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 16005596  T
Q  231 aaatac 236  Q
    ||||||    
T  16005595 aaatac 16005590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 32151931 - 32151996
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  ||||||  |||| ||| |||||||||||||||||||||||||    
T  32151931 aagtgggtgtatgttagcaactcctatatgcatttgctaggatacacccacttattttttagaagg 32151996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 32156113 - 32156009
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  | ||||  |||| ||||||||||||||||||||||||||| ||||  ||| | ||||  |||| |||||||| |||    
T  32156113 aagtgggtgtatgttagcaactcctgtatgcatttgctagaatacacccacttattttttagaatgagtgttttagcaagt-tataaataaaaagtagtt 32156015  T
Q  231 aaatac 236  Q
    ||||||    
T  32156014 aaatac 32156009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 116
Target Start/End: Complemental strand, 24190910 - 24190874
Alignment:
Q  80 ataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||||||||||||||||||||||||||    
T  24190910 ataaatacaccttgaggtgtatgttgctataacacac 24190874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 27389664 - 27389624
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  27389664 gttaataaatacaccttaaggtgtatgttgctataacacac 27389624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 43236164 - 43236204
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  43236164 gttaataaatacaccttaaggtgtatgttgctataacacac 43236204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 51465104 - 51465037
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||| ||||||||||||||||||||| ||| | || | |||||||||||| |||||||||||    
T  51465104 tagaatacacc-acttattttttagaaggagtattttagcaaatcaataactaaaaaatggttaaatac 51465037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 3273462 - 3273397
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  ||||||||||| ||||||||||||||||| ||||    
T  3273462 aagtgggtgtatgttagcaactcctataggcatttgttagaatgcacccacttattttttaaaagg 3273397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 6192491 - 6192556
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||| ||||||||| |  ||||||  |||| |||||||||||||||||| ||||||||||    
T  6192491 aagtgggtgtgtgttagcaactcctatatgcatttgctagaatacacccacttatattttagaagg 6192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 26843063 - 26843167
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||| ||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  26843063 aagtgggtgtgtgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 26843161  T
Q  231 aaatac 236  Q
    ||||||    
T  26843162 aaatac 26843167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 28454835 - 28454770
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  28454835 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 28454770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 36389524 - 36389628
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  36389524 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 36389622  T
Q  231 aaatac 236  Q
    ||||||    
T  36389623 aaatac 36389628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 8643126 - 8643062
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||| || |||||||||||||||||||||||||    
T  8643126 aagtgggtgtatgttagcaactcctatacgcatttgctataatacacccacttattttttagaag 8643062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 112
Target Start/End: Original strand, 28646772 - 28646808
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataac 112  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28646772 gttaataaatacaccttaaggtgtatgttgctataac 28646808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 39424279 - 39424319
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||| || |||||||||||||||||||||||    
T  39424279 gttaataaatacactttaaggtgtatgttgctataacacac 39424319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 13264661 - 13264559
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||| ||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  13264661 aagtggatgtatgttagcaactcatataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 13264563  T
Q  231 aaat 234  Q
    ||||    
T  13264562 aaat 13264559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 42199983 - 42199881
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||| ||||||||||||||| | ||| | |  |||| |||||||||| |||||| ||||||||||| ||| ||| | ||||  ||||||||||||| |||    
T  42199983 aagtaggtgtatgttagcaactcttacaggcatttgctagaatacacacacttaatttttagaaggtgtattttagcaagt-tataactaaaaagtagtt 42199885  T
Q  231 aaat 234  Q
    ||||    
T  42199884 aaat 42199881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 42208851 - 42208749
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||| ||||||||||||||| | ||| | |  |||| |||||||||| |||||| ||||||||||| ||| ||| | ||||  ||||||||||||| |||    
T  42208851 aagtaggtgtatgttagcaactcttacaggcatttgctagaatacacacacttaatttttagaaggtgtattttagcaagt-tataactaaaaagtagtt 42208753  T
Q  231 aaat 234  Q
    ||||    
T  42208752 aaat 42208749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 13157657 - 13157729
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  13157657 tttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 13157729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 27348224 - 27348261
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagta 200  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  27348224 tttgttagaatacaccaacttattttttagaagaagta 27348261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 51431944 - 51431911
Alignment:
Q  163 tttgttagaatacacccacttattttttagaagg 196  Q
    |||| |||||||||||||||||||||||||||||    
T  51431944 tttgctagaatacacccacttattttttagaagg 51431911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 5491704 - 5491771
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||| |||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||||||||    
T  5491704 tagaatacactcacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagttaaatac 5491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 20201872 - 20201832
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  20201872 gttaataaatagaccttaagatgtatgttgctataacacac 20201832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 28094592 - 28094552
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||| || ||||||||||| |||||||||||    
T  28094592 gttaataaatacactttaaggtgtatgttactataacacac 28094552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 51465195 - 51465155
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| | || ||||||||||||||||||    
T  51465195 gttaataaatacaccttaaagtatatgttgctataacacac 51465155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 76 - 235
Target Start/End: Original strand, 1783015 - 1783173
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  1783015 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 1783113  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaata 235  Q
    ||||||||||||||||||||||||  ||| | ||||||||||||||||||||||||||||    
T  1783114 acccacttattttttagaaggagtgttttagcaagtgaataactaaaaagtggttaaata 1783173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 9483748 - 9483821
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  9483748 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 9483821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Complemental strand, 14826475 - 14826316
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||| ||||| |  |||||| |  |||| |  |||| ||||||||    
T  14826475 gttaataaatacaccttaaggtgtatgttgctataacacaccttc-taaaaaaacaagtaggtgtgttctagcaaatcctataagcatttgctagaatac 14826377  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||| || || ||| | |||||||||||||||||||||||||||||    
T  14826376 acccacttattttttagaatgaatatttttgcaagtgaataactaaaaagtggttaaatac 14826316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 21442141 - 21442300
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||| ||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| ||||||||    
T  21442141 gttaataaatacatcttaaggtgtatgttgctataacacaccttctaaaaaaagcaagtgggtgtgttctagcaaatcctataggcatttgctagaatac 21442240  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||| |||| |||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  21442241 acc-acttgttttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 21442300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 41942960 - 41943028
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||| ||||||| ||| | |||||||||||||||||||||||||||||    
T  41942960 tagaatacacccacttattttttaggaggagtattttagcaagtgaataactaaaaagtggttaaatac 41943028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 19971529 - 19971456
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || |||||||||||||| |||||||||||    
T  19971529 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaaatggttaaatac 19971456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 21021284 - 21021357
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | || |||||||||||||| |||||||||||    
T  21021284 tttgctagaatacacccacttattttttagaaggagtattttagcaaatgaataactaaaaaatggttaaatac 21021357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 42556441 - 42556506
Alignment:
Q  171 aatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||| ||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  42556441 aatacacctacttattttttagaaggagtattttagcaagtgaataactaaaaagtggttaaatac 42556506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 30577881 - 30578041
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||           | |||||||| |  |||||| || |||| |  |||| ||| ||||    
T  30577881 gttaataaatacaccttaaggtgtatgttgctataacacaccttctaacaaaaataggtgggtgtgttctagcaaattctataggcatttgctaggatac 30577980  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||| ||||| ||| | | |||||||||||||||||||||||||||    
T  30577981 acccgcttattttttagaatgagtattttagcaggtgaataactaaaaagtggttaaatac 30578041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 77 - 236
Target Start/End: Original strand, 31071568 - 31071725
Alignment:
Q  77 ttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaataca 176  Q
    |||||||||||||||| |||||||||| |||||||||||| ||          ||||||||||| |  |||||| |  |||| |  |||| |||||||||    
T  31071568 ttaataaatacaccttaaggtgtatgtcgctataacacacctt--ctaaaaaacaagtgggtgtgttctagcaaatcctataggcatttgctagaataca 31071665  T
Q  177 cccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    || ||||||||||||||||||||| ||| | || | ||||||||||||||||||||||||    
T  31071666 ccaacttattttttagaaggagtattttagcaaatcaataactaaaaagtggttaaatac 31071725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 25281054 - 25281122
Alignment:
Q  168 tagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    ||||||||||||||||||||||||||| ||||| ||| | || | ||||||||||||||| ||||||||    
T  25281054 tagaatacacccacttattttttagaatgagtattttagcaaataaataactaaaaagtgcttaaatac 25281122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 13468430 - 13468326
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| || |||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  13468430 aagtgggtgtatgttagcaactcctataggcatttgctataatacacccacttattttttagaaggtgtgctttagcaagt-tataactaaaaagtagtt 13468332  T
Q  231 aaatac 236  Q
    ||||||    
T  13468331 aaatac 13468326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 21442448 - 21442395
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaata 216  Q
    |||| ||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  21442448 tttgctagaatacacccacttattttttagaaggagtattttagcaagtgaata 21442395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 23544921 - 23544856
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  ||||    ||||||||||||||||||||||||||||||||||    
T  23544921 aagtgggtgtatgttagcaactcctatagacatttgttagaatacacccacttattttttagaagg 23544856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 27545827 - 27545931
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  27545827 aagtgggtgtatgttagcaactcctataagcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 27545925  T
Q  231 aaatac 236  Q
    ||||||    
T  27545926 aaatac 27545931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 32487056 - 32486952
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||| | ||| ||| | ||||  ||||||||||||| |||    
T  32487056 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaagtgtattttagcaagt-tataactaaaaagtagtt 32486958  T
Q  231 aaatac 236  Q
    ||||||    
T  32486957 aaatac 32486952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 1775580 - 1775540
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  1775580 gttaataaatacaccttaaggtgtatgttgctataacacac 1775540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 3154254 - 3154214
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  3154254 gttaataaatacaccttaaggtgtatgttgctataacacac 3154214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 4018720 - 4018680
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4018720 gttaataaatacaccttaaggtgtatgttgctataacacac 4018680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 8258451 - 8258387
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||||||    
T  8258451 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttattttttagaag 8258387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 13269363 - 13269261
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||||||| |  ||||    |||| ||||||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  13269363 aagtgggtgtatgttagcaactcctataaacatttgctagaatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 13269265  T
Q  231 aaat 234  Q
    ||||    
T  13269264 aaat 13269261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 234
Target Start/End: Original strand, 13290563 - 13290665
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||| ||||||||||||| | ||| |||  |||||||||||||| ||||||| ||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  13290563 aagtggatgtatgttagcaactcttacatgcatttgttagaatacatccacttaatttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 13290661  T
Q  231 aaat 234  Q
    ||||    
T  13290662 aaat 13290665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 2178780 - 2178731
Alignment:
Q  187 ttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||| ||| | || ||||||||||||||||||||||||||    
T  2178780 ttttagaaggagtattttagcaaatgaataactaaaaagtggttaaatac 2178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 10616358 - 10616423
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  10616358 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 10616423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 32069089 - 32069154
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  32069089 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 32069154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 36899806 - 36899871
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  36899806 aagtgggtgtatgttagcaactcctatacgcatttgctaggatacacccacttattttttagaagg 36899871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 5642696 - 5642656
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  5642696 gttaataaatacaccttaaggtatatgttgctataacacac 5642656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 5644637 - 5644597
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  5644637 gttaataaatacaccttaaggtatatgttgctataacacac 5644597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 14819320 - 14819360
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  14819320 gttaataaacacaccttaaggtgtatgttgctataacacac 14819360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 116
Target Start/End: Original strand, 18804339 - 18804375
Alignment:
Q  80 ataaatacaccttgaggtgtatgttgctataacacac 116  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18804339 ataaatacaccttgaggtgtatgttgctataagacac 18804375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 19971615 - 19971575
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  19971615 gttaataaatacaccttaaggtgtatgttactataacacac 19971575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 21021198 - 21021238
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||||||| |||||||||||    
T  21021198 gttaataaatacaccttaaggtgtatgttactataacacac 21021238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 25281009 - 25281049
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| ||||||| |||||||||||||||    
T  25281009 gttaataaatacaccttaaggtgtaagttgctataacacac 25281049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 191
Target Start/End: Original strand, 30207234 - 30207294
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttatttttta 191  Q
    |||||||||||||||||||| |  |||| |  |||| ||||||||||||||||||||||||    
T  30207234 aagtgggtgtatgttagcaactcctataggcatttgctagaatacacccacttatttttta 30207294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 5642615 - 5642545
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||| |||| |||   ||||| ||| | |||||||||| ||||||||||||||||||    
T  5642615 tttgctagaatacacccactttttttgtag---gagtattttagcaagtgaataattaaaaagtggttaaatac 5642545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 5644556 - 5644486
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||| |||||||||||||||| |||| |||   ||||| ||| | |||||||||| ||||||||||||||||||    
T  5644556 tttgctagaatacacccactttttttgtag---gagtattttagcaagtgaataattaaaaagtggttaaatac 5644486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 30633194 - 30633092
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||| ||||||||| || || |||  |||| ||||||||||||| ||| ||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  30633194 aagtgggtgtttgttagcaacttctacatgcatttgctagaatacacccatttaatttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 30633096  T
Q  231 aaat 234  Q
    ||||    
T  30633095 aaat 30633092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 1201736 - 1201801
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||| ||||||||||    
T  1201736 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttatattttagaagg 1201801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 26043070 - 26042966
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    |||||||||||||||| ||| |  |||| |  |||| ||| |||||||||||||||||||| |||| ||  ||| | ||||  ||||||||||||| |||    
T  26043070 aagtgggtgtatgttaacaactcctataggcatttgctaggatacacccacttattttttaaaaggtgtgttttagcaagt-tataactaaaaagtagtt 26042972  T
Q  231 aaatac 236  Q
    ||||||    
T  26042971 aaatac 26042966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 196
Target Start/End: Complemental strand, 45299717 - 45299652
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    ||||||||||||| |||||| | ||||| |  |||| ||| ||||||||||||||||||| |||||    
T  45299717 aagtgggtgtatgctagcaactcttataggcatttgctaggatacacccacttatttttttgaagg 45299652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 3154160 - 3154132
Alignment:
Q  208 aagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||    
T  3154160 aagtgaataactaaaaagtggttaaatac 3154132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 9483662 - 9483702
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||| || || |||||||||||||||||||||||    
T  9483662 gttaataaatagacattaaggtgtatgttgctataacacac 9483702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 9484049 - 9483985
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaag 195  Q
    |||||||||||||||||||| |  |||| |  |||||||  ||| ||||||||||||||||||||    
T  9484049 aagtgggtgtatgttagcaactcctataagcatttgttaagatatacccacttattttttagaag 9483985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 41942872 - 41942912
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||| | |||||||| ||||||||||||||    
T  41942872 gttaataaatacaccctaaggtgtatcttgctataacacac 41942912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 26064 - 26224
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||          ||||||||||| |  |||||| | ||||| |  |||| ||||||||    
T  26064 gttaataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagtgggtgtgttctagcaaatcttataggcatttgctagaatac 26163  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||| |||||||| ||||| ||| | || | ||||||||||||||||||||||||    
T  26164 acccacttatattttagaatgagtattttagcaaataaataactaaaaagtggttaaatac 26224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 58077 - 57920
Alignment:
Q  79 aataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacc 178  Q
    |||||||||||||| ||||||||||||||||||||||| ||          ||||| ||||| |  |||||| |  |||| |  |||| |||||||||||    
T  58077 aataaatacaccttaaggtgtatgttgctataacacaccttctagaaaaagcaagttggtgttttctagcaaatcctataggcatttgctagaatacacc 57978  T
Q  179 cacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||| ||| | || |||||||||||||| |||||||||||    
T  57977 cacttattttttagaaggagtattttagcaaatgaataactaaaaaatggttaaatac 57920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 452465 - 452538
Alignment:
Q  163 tttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggttaaatac 236  Q
    |||||||||||||||||||||||||||||||||||||| ||| | ||||  |||||||||||||||||||||||    
T  452465 tttgttagaatacacccacttattttttagaaggagtattttagcaagtatataactaaaaagtggttaaatac 452538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 452379 - 452419
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  452379 gttaataaatacaccttaaggtgtatgttgctataacacac 452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 2915 - 2767
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||| ||| || ||||||||| |||||||||| ||          ||||||||||| |  |||||| || |||| |  |||||||||||||    
T  2915 gttaataaatacatcttaagatgtatgttgttataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaattctataggcatttgttagaatac 2816  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaa 224  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  2815 acccacttattttttagaaggagtattttagtaagtgtataactaaaaa 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 14970 - 14822
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacacttttgnnnnnnnncaagtgggtgtatgttagcaagttttatatgtgtttgttagaatac 175  Q
    ||||||||||||| ||| || ||||||||| |||||||||| ||          ||||||||||| |  |||||| || |||| |  |||||||||||||    
T  14970 gttaataaatacatcttaagatgtatgttgttataacacaccttctaaaaaaaacaagtgggtgtgttctagcaaattctataggcatttgttagaatac 14871  T
Q  176 acccacttattttttagaaggagtaatttggtaagtgaataactaaaaa 224  Q
    ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  14870 acccacttattttttagaaggagtattttagtaagtgtataactaaaaa 14822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 82755 - 82795
Alignment:
Q  76 gttaataaatacaccttgaggtgtatgttgctataacacac 116  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  82755 gttaataaatacaccttaaggtgtatgttgctataacacac 82795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 20686 - 20751
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaagg 196  Q
    |||||||||||||||||||| |  |||| |  |||| ||| |||||||||||||||||||||||||    
T  20686 aagtgggtgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaagg 20751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 9799 - 9903
Alignment:
Q  131 aagtgggtgtatgttagcaagttttatatgtgtttgttagaatacacccacttattttttagaaggagtaatttggtaagtgaataactaaaaagtggtt 230  Q
    ||||||| |||||||||||| |  |||| |  |||| ||| ||||||||||||||||||||||||| ||  ||| | ||||  ||||||||||||| |||    
T  9799 aagtgggcgtatgttagcaactcctataggcatttgctaggatacacccacttattttttagaaggtgtgttttagcaagt-tataactaaaaagtagtt 9897  T
Q  231 aaatac 236  Q
    ||||||    
T  9898 aaatac 9903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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