View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4169_low_1 (Length: 392)

Name: NF4169_low_1
Description: NF4169
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4169_low_1
NF4169_low_1
[»] chr6 (28 HSPs)
chr6 (95-376)||(885795-886076)
chr6 (159-376)||(857639-857854)
chr6 (1-76)||(885681-885756)
chr6 (1-72)||(24949710-24949781)
chr6 (1-71)||(390884-390954)
chr6 (4-74)||(6047878-6047948)
chr6 (1-75)||(7405439-7405513)
chr6 (1-71)||(17225322-17225392)
chr6 (1-71)||(31971109-31971179)
chr6 (4-73)||(6045763-6045832)
chr6 (1-73)||(22898850-22898922)
chr6 (1-71)||(766506-766576)
chr6 (1-71)||(8558993-8559062)
chr6 (1-71)||(14931257-14931327)
chr6 (1-75)||(33859485-33859559)
chr6 (5-73)||(22880915-22880983)
chr6 (5-56)||(30686558-30686609)
chr6 (7-75)||(7405529-7405597)
chr6 (1-56)||(6801630-6801685)
chr6 (5-71)||(13144292-13144358)
chr6 (7-74)||(24949627-24949694)
chr6 (7-74)||(31971026-31971093)
chr6 (1-56)||(34639119-34639174)
chr6 (1-35)||(36395-36429)
chr6 (7-72)||(14931338-14931403)
chr6 (7-72)||(885600-885665)
chr6 (7-56)||(8558928-8558977)
chr6 (7-71)||(17225242-17225306)
[»] chr1 (39 HSPs)
chr1 (1-75)||(2352304-2352378)
chr1 (1-74)||(14281586-14281659)
chr1 (1-73)||(9301998-9302070)
chr1 (1-73)||(38830480-38830552)
chr1 (1-75)||(1674051-1674125)
chr1 (1-75)||(23537400-23537474)
chr1 (1-71)||(24594997-24595067)
chr1 (1-74)||(10380469-10380542)
chr1 (1-74)||(23398076-23398149)
chr1 (1-74)||(34718887-34718960)
chr1 (1-73)||(2961183-2961255)
chr1 (4-71)||(29312438-29312505)
chr1 (1-72)||(33325331-33325402)
chr1 (1-56)||(40161252-40161307)
chr1 (4-74)||(9548668-9548738)
chr1 (1-74)||(7796169-7796242)
chr1 (1-66)||(45536242-45536307)
chr1 (4-72)||(10065337-10065405)
chr1 (1-73)||(28359150-28359222)
chr1 (4-75)||(26550369-26550440)
chr1 (1-56)||(28989286-28989341)
chr1 (1-56)||(46320228-46320283)
chr1 (1-64)||(15289779-15289842)
chr1 (1-74)||(26733781-26733854)
chr1 (1-57)||(24463303-24463358)
chr1 (1-72)||(30264853-30264924)
chr1 (1-42)||(26545025-26545066)
chr1 (7-72)||(26550285-26550350)
chr1 (26-66)||(2512415-2512455)
chr1 (7-71)||(9301918-9301982)
chr1 (7-71)||(10380389-10380453)
chr1 (7-71)||(26545082-26545146)
chr1 (4-55)||(6784674-6784725)
chr1 (7-72)||(2352394-2352459)
chr1 (7-72)||(2961102-2961167)
chr1 (7-72)||(10065253-10065318)
chr1 (8-64)||(15289859-15289915)
chr1 (7-71)||(23398165-23398229)
chr1 (15-71)||(45536162-45536218)
[»] chr7 (28 HSPs)
chr7 (2-65)||(32050160-32050223)
chr7 (1-71)||(23248747-23248817)
chr7 (1-74)||(3411328-3411401)
chr7 (1-72)||(5909550-5909621)
chr7 (1-75)||(12763224-12763298)
chr7 (1-59)||(34281748-34281806)
chr7 (1-71)||(35427738-35427808)
chr7 (1-72)||(12426609-12426680)
chr7 (1-73)||(10599395-10599467)
chr7 (1-56)||(30866259-30866314)
chr7 (1-71)||(5347802-5347871)
chr7 (1-75)||(7107625-7107699)
chr7 (7-75)||(12763314-12763382)
chr7 (5-76)||(20397809-20397880)
chr7 (4-59)||(46680911-46680966)
chr7 (7-73)||(7107715-7107781)
chr7 (1-71)||(7463448-7463518)
chr7 (1-55)||(19979573-19979627)
chr7 (1-42)||(29770350-29770391)
chr7 (4-54)||(12085106-12085156)
chr7 (1-71)||(46449857-46449927)
chr7 (8-74)||(3411418-3411484)
chr7 (1-71)||(26563920-26563990)
chr7 (7-73)||(30866330-30866396)
chr7 (7-72)||(20397900-20397965)
chr7 (5-73)||(17351554-17351622)
chr7 (6-42)||(22055758-22055794)
chr7 (7-75)||(32050075-32050143)
[»] chr8 (41 HSPs)
chr8 (1-74)||(25847963-25848036)
chr8 (1-66)||(32159113-32159178)
chr8 (1-73)||(41569175-41569247)
chr8 (1-72)||(2339288-2339359)
chr8 (1-71)||(2229149-2229219)
chr8 (1-71)||(29563657-29563727)
chr8 (1-71)||(33642457-33642527)
chr8 (1-66)||(12270135-12270200)
chr8 (1-64)||(7668197-7668260)
chr8 (1-72)||(30924000-30924071)
chr8 (1-74)||(34157656-34157730)
chr8 (1-55)||(42189818-42189872)
chr8 (1-71)||(45145868-45145938)
chr8 (1-66)||(22781886-22781951)
chr8 (1-56)||(27793211-27793266)
chr8 (1-56)||(37564710-37564765)
chr8 (1-56)||(40465317-40465372)
chr8 (1-72)||(41915592-41915663)
chr8 (1-71)||(34028382-34028452)
chr8 (5-56)||(33837594-33837645)
chr8 (7-73)||(40465235-40465301)
chr8 (4-64)||(25878254-25878313)
chr8 (1-56)||(29916541-29916597)
chr8 (4-56)||(42351280-42351332)
chr8 (8-71)||(11293273-11293336)
chr8 (1-48)||(43135066-43135113)
chr8 (5-71)||(25848050-25848116)
chr8 (1-66)||(40834139-40834205)
chr8 (7-73)||(42351195-42351261)
chr8 (4-53)||(8242240-8242289)
chr8 (7-72)||(41915679-41915744)
chr8 (1-56)||(3799795-3799851)
chr8 (7-75)||(43135129-43135197)
chr8 (8-71)||(45145951-45146014)
chr8 (7-73)||(29563743-29563809)
chr8 (7-72)||(2339375-2339440)
chr8 (2-71)||(27793277-27793346)
chr8 (7-56)||(32159048-32159097)
chr8 (7-71)||(30923920-30923984)
chr8 (7-75)||(41569091-41569159)
chr8 (1-37)||(43295142-43295178)
[»] chr4 (48 HSPs)
chr4 (1-72)||(36099485-36099556)
chr4 (1-74)||(580490-580563)
chr4 (4-73)||(4758859-4758928)
chr4 (1-72)||(23125644-23125715)
chr4 (1-72)||(53621407-53621478)
chr4 (1-71)||(44200051-44200121)
chr4 (1-73)||(38687990-38688062)
chr4 (1-73)||(56216231-56216303)
chr4 (1-56)||(2279538-2279593)
chr4 (1-56)||(6246622-6246677)
chr4 (1-56)||(7350285-7350340)
chr4 (4-71)||(18135395-18135462)
chr4 (1-72)||(47948937-47949008)
chr4 (1-71)||(3085951-3086021)
chr4 (1-71)||(49122599-49122669)
chr4 (1-75)||(51833007-51833081)
chr4 (1-73)||(5970358-5970430)
chr4 (4-56)||(18430337-18430389)
chr4 (4-56)||(27006519-27006571)
chr4 (1-56)||(31227285-31227340)
chr4 (1-56)||(31854458-31854513)
chr4 (1-59)||(38046621-38046679)
chr4 (5-71)||(39834273-39834339)
chr4 (1-71)||(39877402-39877472)
chr4 (1-74)||(19485568-19485641)
chr4 (5-73)||(2385278-2385346)
chr4 (1-65)||(35328944-35329008)
chr4 (5-56)||(2411923-2411974)
chr4 (1-56)||(54611988-54612043)
chr4 (4-61)||(15170965-15171022)
chr4 (1-42)||(21221145-21221186)
chr4 (1-74)||(53303732-53303805)
chr4 (4-61)||(55292194-55292251)
chr4 (7-74)||(20688501-20688568)
chr4 (7-73)||(580408-580474)
chr4 (2-72)||(6246688-6246758)
chr4 (8-74)||(15170879-15170945)
chr4 (1-73)||(21229222-21229294)
chr4 (4-56)||(52536033-52536085)
chr4 (5-37)||(55466115-55466147)
chr4 (7-74)||(4758773-4758840)
chr4 (7-72)||(2385193-2385258)
chr4 (7-72)||(19485657-19485722)
chr4 (7-56)||(31227356-31227405)
chr4 (7-72)||(53621326-53621391)
chr4 (1-73)||(4698620-4698692)
chr4 (15-71)||(38687910-38687966)
chr4 (7-71)||(52535950-52536014)
[»] chr2 (48 HSPs)
chr2 (1-72)||(13775709-13775780)
chr2 (1-74)||(6761461-6761534)
chr2 (1-74)||(38598452-38598525)
chr2 (1-73)||(30864754-30864826)
chr2 (1-72)||(29866080-29866151)
chr2 (1-71)||(16241346-16241416)
chr2 (1-71)||(25892023-25892093)
chr2 (1-71)||(44737361-44737431)
chr2 (1-73)||(18452566-18452638)
chr2 (1-56)||(11363077-11363132)
chr2 (4-71)||(20427000-20427067)
chr2 (1-72)||(39377834-39377905)
chr2 (1-56)||(43658004-43658059)
chr2 (1-71)||(41260024-41260094)
chr2 (4-73)||(11711406-11711475)
chr2 (1-62)||(32880915-32880976)
chr2 (1-65)||(40430745-40430809)
chr2 (1-73)||(42263549-42263621)
chr2 (4-75)||(32750424-32750495)
chr2 (5-56)||(45065663-45065714)
chr2 (2-56)||(39377911-39377965)
chr2 (1-66)||(32197380-32197445)
chr2 (1-74)||(41205569-41205642)
chr2 (7-74)||(44737279-44737346)
chr2 (1-66)||(2100021-2100086)
chr2 (11-56)||(3264936-3264981)
chr2 (2-71)||(4740709-4740778)
chr2 (4-56)||(7765876-7765928)
chr2 (1-56)||(1944613-1944668)
chr2 (1-72)||(27182073-27182144)
chr2 (1-72)||(27831615-27831686)
chr2 (1-48)||(42341640-42341687)
chr2 (7-73)||(22857801-22857867)
chr2 (1-33)||(33913188-33913220)
chr2 (7-74)||(13775796-13775863)
chr2 (10-72)||(44736776-44736839)
chr2 (7-73)||(7765791-7765857)
chr2 (7-73)||(32750339-32750405)
chr2 (7-72)||(6761550-6761615)
chr2 (27-72)||(11362996-11363041)
chr2 (7-72)||(25891942-25892007)
chr2 (21-74)||(30864664-30864717)
chr2 (2-71)||(38598536-38598605)
chr2 (7-72)||(40430664-40430729)
chr2 (7-72)||(41205488-41205553)
chr2 (7-72)||(43657923-43657988)
chr2 (7-71)||(16241266-16241330)
chr2 (7-59)||(20427086-20427138)
[»] chr5 (42 HSPs)
chr5 (1-71)||(13144879-13144949)
chr5 (1-71)||(29374169-29374239)
chr5 (1-72)||(15569410-15569481)
chr5 (1-72)||(25027692-25027763)
chr5 (1-72)||(41989562-41989633)
chr5 (1-71)||(18353287-18353357)
chr5 (4-71)||(7053647-7053714)
chr5 (1-76)||(7945831-7945906)
chr5 (1-72)||(37699859-37699930)
chr5 (1-71)||(7749917-7749987)
chr5 (1-71)||(9601672-9601742)
chr5 (1-71)||(31803037-31803107)
chr5 (1-66)||(41046832-41046897)
chr5 (1-66)||(42311889-42311954)
chr5 (1-56)||(6338394-6338449)
chr5 (1-56)||(26898205-26898260)
chr5 (1-59)||(14338826-14338884)
chr5 (1-74)||(904045-904118)
chr5 (4-73)||(1643341-1643410)
chr5 (1-56)||(16089166-16089222)
chr5 (5-56)||(1108297-1108348)
chr5 (1-56)||(20578734-20578789)
chr5 (1-72)||(21610380-21610451)
chr5 (1-72)||(23411163-23411234)
chr5 (5-56)||(36419068-36419119)
chr5 (1-64)||(41815191-41815254)
chr5 (4-74)||(2959321-2959391)
chr5 (4-74)||(2967790-2967860)
chr5 (4-57)||(6910725-6910778)
chr5 (3-56)||(36417128-36417181)
chr5 (7-74)||(23411250-23411317)
chr5 (1-66)||(21090455-21090520)
chr5 (1-59)||(2825874-2825929)
chr5 (7-66)||(21090380-21090439)
chr5 (7-73)||(2825945-2826011)
chr5 (7-73)||(29374255-29374321)
chr5 (15-72)||(903964-904021)
chr5 (3-64)||(6499987-6500048)
chr5 (7-75)||(1643429-1643497)
chr5 (5-73)||(26898274-26898342)
chr5 (7-71)||(37699779-37699843)
chr5 (4-56)||(38393837-38393889)
[»] chr3 (51 HSPs)
chr3 (1-71)||(26999020-26999090)
chr3 (1-71)||(47449915-47449985)
chr3 (1-74)||(8243761-8243834)
chr3 (1-74)||(10049664-10049737)
chr3 (1-72)||(14768096-14768167)
chr3 (1-72)||(28945654-28945725)
chr3 (1-72)||(51698193-51698264)
chr3 (1-71)||(9440207-9440277)
chr3 (1-70)||(6086980-6087049)
chr3 (1-66)||(49122948-49123013)
chr3 (1-72)||(25846590-25846661)
chr3 (1-56)||(52114103-52114158)
chr3 (1-59)||(8825742-8825800)
chr3 (1-71)||(29019734-29019804)
chr3 (1-66)||(25113428-25113493)
chr3 (1-73)||(9190025-9190097)
chr3 (1-53)||(40464539-40464591)
chr3 (4-71)||(9465153-9465220)
chr3 (1-56)||(21653423-21653478)
chr3 (1-72)||(23825147-23825218)
chr3 (1-56)||(40141953-40142008)
chr3 (1-71)||(379069-379139)
chr3 (1-75)||(18765337-18765411)
chr3 (1-71)||(19202329-19202399)
chr3 (1-75)||(28565014-28565088)
chr3 (1-65)||(335454-335518)
chr3 (4-72)||(40214982-40215050)
chr3 (5-73)||(42605910-42605978)
chr3 (5-71)||(42225645-42225711)
chr3 (7-75)||(8243677-8243745)
chr3 (1-56)||(3484346-3484401)
chr3 (9-72)||(28945743-28945806)
chr3 (7-73)||(23825234-23825300)
chr3 (7-72)||(10049753-10049818)
chr3 (1-42)||(44593280-44593321)
chr3 (7-75)||(26999106-26999174)
chr3 (2-66)||(55139253-55139317)
chr3 (5-40)||(1122305-1122340)
chr3 (7-74)||(51698110-51698177)
chr3 (7-72)||(39341370-39341438)
chr3 (7-72)||(6086899-6086964)
chr3 (2-75)||(28406462-28406535)
chr3 (7-56)||(29019820-29019869)
chr3 (15-56)||(42841862-42841903)
chr3 (7-75)||(379158-379226)
chr3 (1-37)||(8987808-8987844)
chr3 (1-54)||(16660359-16660414)
chr3 (5-53)||(19880869-19880917)
chr3 (7-71)||(22003881-22003945)
chr3 (7-71)||(22011398-22011462)
chr3 (4-56)||(39341457-39341509)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-75)||(35949-36019)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-74)||(11026-11099)
scaffold0221 (7-71)||(11115-11179)
[»] scaffold0144 (1 HSPs)
scaffold0144 (1-74)||(38821-38894)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-71)||(29243-29313)
[»] scaffold0592 (2 HSPs)
scaffold0592 (1-74)||(375-448)
scaffold0592 (7-73)||(464-530)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-73)||(492384-492456)
[»] scaffold2107 (2 HSPs)
scaffold2107 (5-56)||(457-508)
scaffold2107 (7-75)||(528-596)
[»] scaffold0009 (1 HSPs)
scaffold0009 (11-57)||(3729-3775)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-74)||(77424-77496)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-56)||(15169-15224)
[»] scaffold0067 (2 HSPs)
scaffold0067 (1-56)||(5230-5285)
scaffold0067 (5-56)||(5299-5350)


Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 95 - 376
Target Start/End: Original strand, 885795 - 886076
Alignment:
Q  95 acaacacatgttccaaatataaattgaaaatacaaattatccaaattccaaactatacaaatagtaagaaaactattggatagtatggtcaaccctatca 194  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  885795 acaacacatgttccaaatataaattgaaaatacaaattatccaaattccaaactatacaaatagtaagaaaactattggatagtatggtcaaccctatca 885894  T
Q  195 cccctccgcttccgacaataaatcattcatcctgaacctcttcgaggatatgctccaaactcagccacgaatgacaaactttccctctccacttgaccat 294  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  885895 cccctccgcttccgacgataaatcattcatcctgaacctcttcgaggatatgctccaaactcggccacgaatgacaaactttccctctccacttgaccat 885994  T
Q  295 ggcccattatccattgggcatgatctcttatgctccctagttgtgcgatcatgtctctagttgctaattttcacataaatct 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  885995 ggcccattatccattgggcatgatctcttatgctccctagttgtgcgatcatgtctctagttgctaattttcacataaatct 886076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 159 - 376
Target Start/End: Original strand, 857639 - 857854
Alignment:
Q  159 taagaaaactattggatagtatggtcaaccctatcacccctccgcttccgacaataaatcattcatcctgaacctcttcgaggatatgctccaaactcag 258  Q
    ||||||||||||||| | ||||||||| ||  ||||||||||||  |  ||  ||||||||||  || |||||||||| |||||||||||||||||||||    
T  857639 taagaaaactattgggtggtatggtcagcctcatcacccctccgtctttgatgataaatcatttgtcttgaacctctttgaggatatgctccaaactcag 857738  T
Q  259 ccacgaatgacaaactttccctctccacttgaccatggcccattatccattgggcatgatctcttatgctccctagttgtgcgatcatgtctctagttgc 358  Q
    | | | ||||||||||||| |||||||| |||||||   ||||||||| |  | ||||||||||||    ||||||| ||||| |||||  |||||||||    
T  857739 caatgcatgacaaactttctctctccacctgaccattatccattatccctcagacatgatctcttacttgccctagtcgtgcgctcatg--tctagttgc 857836  T
Q  359 taattttcacataaatct 376  Q
    ||||||||||||||||||    
T  857837 taattttcacataaatct 857854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 885681 - 885756
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaac 76  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  885681 aaccaaatacataaattatttaatgtatctaaaaagtaaattctctcttgtaaataggatcggaggtagtattaac 885756  T

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Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 24949710 - 24949781
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  24949710 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 24949781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 390884 - 390954
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  390884 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 6047878 - 6047948
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||||    
T  6047878 caaatacataaattatttaatgtatctaaaaagtaaattatctcttgtaaatatgaccggagggagtatta 6047948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7405513 - 7405439
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || ||| ||||||||    
T  7405513 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtattaa 7405439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17225322 - 17225392
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  17225322 aaccaaatatataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 17225392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31971109 - 31971179
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| || |||||||||||    
T  31971109 aaccaaatacataaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggaggtagta 31971179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 6045763 - 6045832
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||||    
T  6045763 caaatacataaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagtatt 6045832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 22898922 - 22898850
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  22898922 aaccaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 22898850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 766506 - 766576
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||||| ||||    
T  766506 aaccaaatacataaattatttaatgtatctaaaaaataaattatctcttgtaaataggaccggagggagta 766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8558993 - 8559062
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||||||||||| ||||    
T  8558993 aaccaaatacataaattattta-tgtatctaaaaaataaattgtctcttgtaaataagatcggagggagta 8559062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14931327 - 14931257
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||| ||||||    
T  14931327 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggaagtagta 14931257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 33859559 - 33859485
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||| || || ||| ||||||||    
T  33859559 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctattgtaaataggaccgaagggagtattaa 33859485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 22880983 - 22880915
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||| |||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  22880983 aaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 22880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 30686609 - 30686558
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  30686609 aaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 30686558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7405529 - 7405597
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| |||||| ||||||||    
T  7405529 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtattaa 7405597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6801630 - 6801685
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||| ||||||||||| ||||||||||||||||| | |||||||||||    
T  6801630 aaccaaatacatgaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 6801685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 13144292 - 13144358
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||||||||||||||  | |||||||||||||  |||||||| ||||    
T  13144292 aaatacataaattatttaatgtatctaaaaagtaatctatctcttgtaaatagaatcggagggagta 13144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 24949694 - 24949627
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| |||||||    
T  24949694 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtatta 24949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 31971093 - 31971026
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| || | |||||||||||||||| |||||| |||||||    
T  31971093 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggagggagtatta 31971026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34639119 - 34639174
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||| || ||| ||||||||||||||||| |||||| ||||||    
T  34639119 aaccaaatacataaatttttcaatgtatctaaaaagtaaattgtctcttataaata 34639174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 36395 - 36429
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  36395 aaccaaatacataaattatttaatatatctaaaaa 36429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 14931338 - 14931403
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| |||||    
T  14931338 atacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaatatgaccggagggagtat 14931403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 885665 - 885600
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  885665 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 885600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 8558977 - 8558928
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||    
T  8558977 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaata 8558928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 17225306 - 17225242
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | || ||||||||||||| |||||| ||||    
T  17225306 atacatacattattcaatgtatctaaaaagtcaactttcacttgtaaataagaccggagggagta 17225242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 2352378 - 2352304
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  2352378 aaccaaatacataaattatttaatatatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtattaa 2352304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14281659 - 14281586
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  14281659 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 14281586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 9301998 - 9302070
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||||||||||||    
T  9301998 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggaggtagtatt 9302070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 38830552 - 38830480
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  38830552 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 38830480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 1674051 - 1674125
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||| |||| ||||||||    
T  1674051 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatccgagggagtattaa 1674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 23537400 - 23537474
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||  ||||||||    
T  23537400 aaccaaatacataaattatttaatttatctaaaaaataaattgtctcttgtaaataggatcggagagagtattaa 23537474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24594997 - 24595067
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  24594997 aaccaaatatataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagaggtagta 24595067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 10380469 - 10380542
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||| |||||||    
T  10380469 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatta 10380542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 23398149 - 23398076
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||| ||| |||||||||||||| || ||||||||||||| || ||||||||||||||    
T  23398149 aaccaaatacataaattattcaatgtatctaaaaagtaagttgtctcttgtaaataggaccggaggtagtatta 23398076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34718960 - 34718887
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||||| |||||||    
T  34718960 aaccaaatacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagtatta 34718887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 2961183 - 2961255
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||| ||||||    
T  2961183 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagtatt 2961255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 29312505 - 29312438
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  29312505 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33325402 - 33325331
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||| |||||    
T  33325402 aaccagatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaatatgatcggagggagtat 33325331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40161252 - 40161307
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  40161252 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 40161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 9548738 - 9548668
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||| |||||||    
T  9548738 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggaagtatta 9548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7796169 - 7796242
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| |||||||||| |||||| || |||||||||| || |||||| |||||||    
T  7796169 aaccaaatacataaattatttaatgtatctaaaaaataaattgtcacttgtaaatatgaccggaggaagtatta 7796242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45536242 - 45536307
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| || ||||||    
T  45536242 aaccaaatacataaattatttgatgtatctaaaaagtaaattatctcttgtaaataggaccggagg 45536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 10065337 - 10065405
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||||||||||||||| ||||||||||||||||| | | ||||||||| ||||||||| |||||    
T  10065337 caaatacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggatcggaggaagtat 10065405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 28359150 - 28359222
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||| | ||||||    
T  28359150 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatgaagtatt 28359222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 26550369 - 26550440
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||||||||||||||||| | ||||||||||||||| |||||| |||||| || |||||| ||||||||    
T  26550369 caaatacataaattatttaatgtttctaaaaagtaaattgtctcttataaatatgaccggagggagtattaa 26550440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28989341 - 28989286
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  28989341 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 28989286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46320228 - 46320283
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  46320228 aaccaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaata 46320283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15289842 - 15289779
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    ||||||||| |||||||||||||| ||||||||||  ||||| |||||| ||||||||||||||    
T  15289842 aaccaaatatataaattatttaatgtatctaaaaaagaaattgtctcttttaaataagatcgga 15289779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 26733854 - 26733781
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||||||||| |||||||||| |||||||||||| |||| | ||||||||||| || |||||  |||||||    
T  26733854 aaccaaatacatagattatttaatgtatctaaaaagttaattgtttcttgtaaataggaccggagagagtatta 26733781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 24463358 - 24463303
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataa 57  Q
    ||||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  24463358 aaccaaatatataaattatttaatatatctaaaaa-taaattgtcttttgtaaataa 24463303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30264853 - 30264924
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||| |||||||||||||||||||||||||||||  | | | ||||||||| || |||||| |||||    
T  30264853 aaccaaatatataaattatttaatatatctaaaaagtaacatgtttattgtaaataggaccggaggaagtat 30264924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 26545066 - 26545025
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaatt 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  26545066 aaccaaatacataaattatttaatgaatctaaaaagtaaatt 26545025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 26550350 - 26550285
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| ||||||||| |||||    
T  26550350 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggatcggaggaagtat 26550285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 2512455 - 2512415
Alignment:
Q  26 tatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  2512455 tatctaaaaagtaaattgtctcttgtaaataggatcggagg 2512415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 9301982 - 9301918
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||||||| |||||||||||| || | ||||||||||||| || |||||| ||||    
T  9301982 atacatacattatttaatgtatctaaaaagttaactgtctcttgtaaataggaccggagggagta 9301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 10380453 - 10380389
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| ||||    
T  10380453 atacatacattattgaatgtatctaaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 26545082 - 26545146
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | |||||||||||||||| |||||| ||||    
T  26545082 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggaggaagta 26545146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 6784725 - 6784674
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaat 55  Q
    |||||| |||||||||||||| ||||||||||||||||| | || |||||||    
T  6784725 caaatatataaattatttaatgtatctaaaaagtaaattgtttcctgtaaat 6784674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 2352394 - 2352459
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  2352394 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 2352459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2961167 - 2961102
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  2961167 atacatacattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2961102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 10065318 - 10065253
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||| | |||| ||||||||||||| || |||||| |||||    
T  10065318 atacatacattattcaatgtatctaaaaaatcaattttctcttgtaaataggaccggagggagtat 10065253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15289859 - 15289915
Alignment:
Q  8 tacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    |||||| |||||| ||| |||||||||||| || | |||||||||||||||| ||||    
T  15289859 tacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataagaccgga 15289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 23398165 - 23398229
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| |||| ||| ||||||||| || |||||| ||||    
T  23398165 atacatacattattcaatgtatctaaaaagtcaattgtctattgtaaataggaccggagggagta 23398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 45536218 - 45536162
Alignment:
Q  15 attatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||| ||| |||||||||||| |||| |||||||||||||| | |||||| ||||    
T  45536218 attattgaatgtatctaaaaagtcaattttctcttgtaaataaaaccggagggagta 45536162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 2e-25; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 65
Target Start/End: Original strand, 32050160 - 32050223
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggag 65  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32050160 accaaatacataaattatttaatatatctaaaaagtaaattgtctcttgtaaataagatcggag 32050223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23248747 - 23248817
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  23248747 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 23248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 3411401 - 3411328
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||| | |||||||    
T  3411401 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagaccggaagaagtatta 3411328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5909550 - 5909621
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  5909550 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 5909621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 12763298 - 12763224
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || || ||| ||||||||    
T  12763298 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtattaa 12763224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 34281748 - 34281806
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  34281748 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataaga 34281806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35427738 - 35427808
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  35427738 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35427808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 12426609 - 12426680
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||| ||||||||||||| ||||||||||||||| | |||||||||||||||| |||||| |||||    
T  12426609 aaccaaatacgtaaattatttaatgtatctaaaaagtaaactgtctcttgtaaataagaccggaggaagtat 12426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 10599395 - 10599467
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||||||||||||||  || |||||||||| |||||| ||||||||||||| ||||||||| ||||||    
T  10599395 aaccaaatacataaattattgtatgtatctaaaaaataaattgtctcttgtaaataggatcggagggagtatt 10599467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30866314 - 30866259
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  30866314 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttttaaata 30866259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5347802 - 5347871
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||| ||||    
T  5347802 aaccaaatacataaattatttaatgtatct-aaaagtaaattgtctcttgtaaataggaccggagggagta 5347871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 7107699 - 7107625
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| |||||||||| | |||| ||||||||||||| || |||||  ||||||||    
T  7107699 aaccaaatacataaattatttaatgtatctaaaaaattaattgtctcttgtaaatatgaccggagtgagtattaa 7107625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 12763314 - 12763382
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| |||||| ||||||||    
T  12763314 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtattaa 12763382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 76
Target Start/End: Complemental strand, 20397880 - 20397809
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaac 76  Q
    |||||||||||||||||||| |||||||||| |||||| |||||| |||||| || |||||| |||| ||||    
T  20397880 aaatacataaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagtagtaac 20397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 46680911 - 46680966
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    |||||| |||||||||||||| ||||||||||||||||| | ||||||||||||||    
T  46680911 caaatatataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataaga 46680966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 7107715 - 7107781
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||| ||| |||||||||||| || | ||||||||||||| || |||||||||||||    
T  7107715 atacataaattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggaggtagtatt 7107781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7463518 - 7463448
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||||| |||| ||| ||||||||||||| | ||||||||||| || |||||| ||||    
T  7463518 aaccaaatacataaattatgtaatgtatttaaaaagtaaattgtttcttgtaaataggaccggagggagta 7463448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19979573 - 19979627
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaat 55  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||    
T  19979573 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttattgtaaat 19979627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29770391 - 29770350
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaatt 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  29770391 aaccaaatacataaattatttaatgtatctaaaaagtaaatt 29770350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 12085106 - 12085156
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaa 54  Q
    ||||||||||||||||||||| |||||||||| |||| | |||||||||||    
T  12085106 caaatacataaattatttaatgtatctaaaaaataaactgtctcttgtaaa 12085156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 46449857 - 46449927
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| |||||||||||||| ||| |||||| | |||| |||||||||||||  |||||||| ||||    
T  46449857 aaccaaatatataaattatttaatgtatttaaaaaattaattgtctcttgtaaatagaatcggagggagta 46449927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 3411418 - 3411484
Alignment:
Q  8 tacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||| |||||| ||| |||||||||||| || | |||||| |||||| ||||||||| |||||||    
T  3411418 tacatacattattcaatgtatctaaaaagtcaaatttctcttataaataggatcggagggagtatta 3411484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26563990 - 26563920
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||| ||||| |||||||||||||||| ||||   ||||||||| | |||| |||| ||||    
T  26563990 aaccaaatacataatttattcaatatatctaaaaagttaattgcttcttgtaaaaaggatcagagggagta 26563920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 30866330 - 30866396
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||| | || | |||||||||||||||| |||||| ||||||    
T  30866330 atacatacattattgaatgtatctaaaaaatcaactttctcttgtaaataagaccggagggagtatt 30866396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 20397900 - 20397965
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  20397900 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 20397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 17351554 - 17351622
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||  |||||||||| | |||| |||||| |||||| || |||| | ||||||    
T  17351554 aaatacataaattatttaacgtatctaaaaaattaattgtctcttttaaataggaccggatggagtatt 17351622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 22055794 - 22055758
Alignment:
Q  6 aatacataaattatttaatatatctaaaaagtaaatt 42  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  22055794 aatacataaattattcaatatatctaaaaagtcaatt 22055758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 32050143 - 32050075
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| |||||||||||||| | |||| |||||| ||||||  | |||||| ||||||||    
T  32050143 atacatacattattcaatatatctaaaaaatcaattttctcttataaatagaaccggagggagtattaa 32050075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 3e-24; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 25848036 - 25847963
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  25848036 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagctagtatta 25847963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 32159113 - 32159178
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||    
T  32159113 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagg 32159178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41569175 - 41569247
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||||||| | ||||||    
T  41569175 aaccaaatacataaattatttaatatatctaaaaagtaaattgtttcttgtaaataggatcggatgaagtatt 41569247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2339359 - 2339288
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  2339359 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 2339288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2229149 - 2229219
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  2229149 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29563727 - 29563657
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  29563727 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33642527 - 33642457
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  33642527 aaccaaatacataaattatttaatgtatctaaaaagtaaattatctcttgtaaataggaccggagggagta 33642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 12270135 - 12270200
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  12270135 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 12270200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7668260 - 7668197
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||||||    
T  7668260 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatcgga 7668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 30924000 - 30924071
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| || |||||| || ||||||||||||    
T  30924000 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtcttttataaataggaccggaggtagtat 30924071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 34157730 - 34157656
Alignment:
Q  1 aaccaaatacataaattatttaatatatct-aaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||| ||| ||||| |||||||    
T  34157730 aaccaaatacataaattatttaatgtatctaaaaaagtaaattatctcttgtaaataggattggagggagtatta 34157656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42189872 - 42189818
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaat 55  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  42189872 aaccaaatacataaattatttaatatatttaaaaagtaaattgtctcttgtaaat 42189818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45145938 - 45145868
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  45145938 aaccaaaaacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 45145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 22781951 - 22781886
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || ||||||    
T  22781951 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagg 22781886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27793266 - 27793211
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||    
T  27793266 aaccaaatacataaattatttaatgcatctaaaaagtaaattatctcttgtaaata 27793211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37564710 - 37564765
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  37564710 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaata 37564765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40465317 - 40465372
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| ||||||    
T  40465317 aaccaaatacataaattatttaatgtatctaaaaagtaaattttctcttataaata 40465372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41915663 - 41915592
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| |||||||||| |||||| |||||| |||||| || |||||| |||||    
T  41915663 aaccaaatacataaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggagggagtat 41915592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34028452 - 34028382
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  |||||||||| || |||||| ||||    
T  34028452 aaccaaatacataaattatttaatgtatctaaaaagtaaattgttacttgtaaataggaccggagggagta 34028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 33837645 - 33837594
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  33837645 aaatgcataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 33837594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 40465301 - 40465235
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  40465301 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggatcggagggagtatt 40465235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 25878254 - 25878313
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    |||||||||||||||| |||| ||||||||| ||||||| | |||||||||||||||||||    
T  25878254 caaatacataaattatataatgtatctaaaa-gtaaattgtttcttgtaaataagatcgga 25878313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29916597 - 29916541
Alignment:
Q  1 aaccaaatacataaattatttaatatatct-aaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||| |||||||||||| | |||||||||||    
T  29916597 aaccaaatacataaattatttaatgtatctaaaaaagtaaattgtttcttgtaaata 29916541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 42351280 - 42351332
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||| |||||||||||||| |||||||||| |||||| |||||||||||||    
T  42351280 caaatatataaattatttaatgtatctaaaaaataaattgtctcttgtaaata 42351332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 11293273 - 11293336
Alignment:
Q  8 tacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| ||||||| ||| ||||||||||||| ||||||||||||| || |||||| ||||    
T  11293273 tacataaatgatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccggaggaagta 11293336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43135113 - 43135066
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctct 48  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  43135113 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctct 43135066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 25848050 - 25848116
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||||||||    
T  25848050 aaatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggtagta 25848116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40834205 - 40834139
Alignment:
Q  1 aaccaaatacataaattatttaatatatct-aaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||| ||||| | |||| ||||||||||||| || ||||||    
T  40834205 aaccaaatacataaattatttaatgtatctaaaaaaattaattgtctcttgtaaataggaccggagg 40834139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 42351261 - 42351195
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||||||| |||||||||||| ||   |||||||||||||||| |||||| ||||||    
T  42351261 atacatatattatttaatgtatctaaaaagtcaacattctcttgtaaataagaccggagggagtatt 42351195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 8242289 - 8242240
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaa 53  Q
    ||||||||||||| ||||||| ||| ||||||||||||| ||||||||||    
T  8242289 caaatacataaatcatttaatgtatttaaaaagtaaattgtctcttgtaa 8242240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 41915679 - 41915744
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| |||||    
T  41915679 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 41915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 3799795 - 3799851
Alignment:
Q  1 aaccaaatacataaattatttaatatatct-aaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||| | |||||||||||| ||| |||||||||    
T  3799795 aaccaaatacataaattatttaatgtatttaaaaaagtaaattgtctattgtaaata 3799851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 43135129 - 43135197
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||||    
T  43135129 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagtattaa 43135197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 45145951 - 45146014
Alignment:
Q  8 tacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| ||||    
T  45145951 tacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagta 45146014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 29563743 - 29563809
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||    
T  29563743 atacatacattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggaggaagtatt 29563809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 2339375 - 2339440
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  2339375 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2339440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 27793277 - 27793346
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||| ||| ||| |||||| |||||||||||||||| || | ||||||||||||| || |||||| ||||    
T  27793277 accagatatatacattattgaatatatctaaaaagtcaactttctcttgtaaataggaccggagggagta 27793346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 32159097 - 32159048
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||| |||||||||| |||||||||||| || | |||||||||||||    
T  32159097 atacatacattatttaatgtatctaaaaagtcaaatttctcttgtaaata 32159048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 30923984 - 30923920
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||    
T  30923984 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 41569159 - 41569091
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| |||||||||||||| | || | ||||||||||||| || |||||| | ||||||    
T  41569159 atacatacattattcaatatatctaaaaaatcaactttctcttgtaaataggaccggagggaatattaa 41569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43295142 - 43295178
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagt 37  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  43295142 aaccaaatacataaattatttaatgtatataaaaagt 43295178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 36099556 - 36099485
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  36099556 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 36099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 580490 - 580563
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || ||||||||||||||    
T  580490 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggaggtagtatta 580563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 4758859 - 4758928
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  4758859 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatt 4758928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23125715 - 23125644
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  23125715 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 23125644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 53621407 - 53621478
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  53621407 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 53621478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44200051 - 44200121
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||| |||||| ||||    
T  44200051 aaccaaatacataaattatttagtgtatctaaaaagtaaattgtctcttgtaaataagaccggagggagta 44200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 38687990 - 38688062
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||| ||||||    
T  38687990 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtatt 38688062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 56216303 - 56216231
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||  ||| |||| ||||||    
T  56216303 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaatagaatcagaggaagtatt 56216231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2279593 - 2279538
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  2279593 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 2279538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6246677 - 6246622
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6246677 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 6246622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7350285 - 7350340
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  7350285 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 7350340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 18135395 - 18135462
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  18135395 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 18135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47949008 - 47948937
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| || ||  |||||||||||    
T  47949008 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaagtaggactggaggtagtat 47948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3085951 - 3086021
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||||| ||||    
T  3085951 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggagggagta 3086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 49122599 - 49122669
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  49122599 aaccaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 49122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 51833081 - 51833007
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||| | ||||||||    
T  51833081 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggatggagtattaa 51833007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 5970358 - 5970430
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| || |||| | ||||||    
T  5970358 aaccaaatacataaattatttaatgtgtctaaaaagtaaattgtctcttgtaaataggaccggaaggagtatt 5970430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 18430337 - 18430389
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  18430337 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 18430389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 27006571 - 27006519
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  27006571 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 27006519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31227340 - 31227285
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  31227340 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 31227285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 31854458 - 31854513
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  31854458 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 31854513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38046679 - 38046621
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    ||||||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||    
T  38046679 aaccaaatacataaattattttatatatctgaaaaataaattatctcttgtaaataaga 38046621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 39834339 - 39834273
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||| |||||||||||||| |||||||||| |||||| |||||||||||||||| |||||| ||||    
T  39834339 aaatatataaattatttaatgtatctaaaaaataaattgtctcttgtaaataagaccggagggagta 39834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39877472 - 39877402
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||  | ||||||||||| || |||||| ||||    
T  39877472 aaccaaatacataaattatttaatgtatctaaaaagtaaatcgtttcttgtaaataggaccggagggagta 39877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19485641 - 19485568
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||| ||||||||||||| | ||||||||||| ||  ||||| |||||||    
T  19485641 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtttcttgtaaataggacaggagggagtatta 19485568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 2385278 - 2385346
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||| || | |||| ||||||    
T  2385278 aaatacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccagagggagtatt 2385346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 35329008 - 35328944
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggag 65  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||| || |||||    
T  35329008 aaccaaatacataaattatttaatgtatctaaaaagtaaattattttttgtaaataggaccggag 35328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 2411923 - 2411974
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  2411923 aaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 2411974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 54612043 - 54611988
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||| ||||||    
T  54612043 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtgtcttataaata 54611988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 15170965 - 15171022
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatc 61  Q
    ||||||||||||||||| ||| ||||||||||||||||| | | ||||||||||||||    
T  15170965 caaatacataaattattcaatgtatctaaaaagtaaattgttttttgtaaataagatc 15171022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21221186 - 21221145
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaatt 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  21221186 aaccaaatacataaattatttaatgtatctaaaaagtaaatt 21221145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 53303805 - 53303732
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||| | |||||||||| |||||| || |||||||||| || |||| | |||||||    
T  53303805 aaccaaatacataaattatttagtgtatctaaaaaataaattgtcacttgtaaataggaccggatggagtatta 53303732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 55292194 - 55292251
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatc 61  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||||||||||| ||||    
T  55292194 caaatacataaattatttaatgtatctaaaaaataaattgtttcttgtaaataggatc 55292251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 20688501 - 20688568
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || ||||||||||||||    
T  20688501 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggaggtagtatta 20688568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 580474 - 580408
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||  |||||||||||| |||| ||||||||||||| ||||||||| ||||||    
T  580474 atacatacattattcaacgtatctaaaaagtcaattttctcttgtaaataggatcggagggagtatt 580408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 6246688 - 6246758
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  6246688 accaaatacatatattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 6246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 15170945 - 15170879
Alignment:
Q  8 tacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||| |||||| ||| ||| |||||||| |||| |||||||||||||||| |||||| |||||||    
T  15170945 tacatatattattcaatgtatttaaaaagtcaattttctcttgtaaataagaccggagggagtatta 15170879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21229294 - 21229222
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||| ||||   |||||| | ||||||||||||||  ||||| ||||||    
T  21229294 aaccaaatacataaattatttaatgtatttaaatgataaattgtttcttgtaaataagactggagggagtatt 21229222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 52536033 - 52536085
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||||||| ||| |||||||| |||| | |||||||||||    
T  52536033 caaatacataaattatttaatgtatataaaaagttaattgtatcttgtaaata 52536085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 55466115 - 55466147
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagt 37  Q
    |||||||||||||||||||||||||||||||||    
T  55466115 aaatacataaattatttaatatatctaaaaagt 55466147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 4758840 - 4758773
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||||    
T  4758840 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatta 4758773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 2385258 - 2385193
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  2385258 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2385193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 19485657 - 19485722
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||| | |||| ||||||||||||| || |||||| |||||    
T  19485657 atacatacattattcaatgtatctaaaaaatcaattttctcttgtaaataggaccggagggagtat 19485722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 31227356 - 31227405
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||| |||||||||| |||||||||||| || | |||||||||||||    
T  31227356 atacatacattatttaatgtatctaaaaagtcaactttctcttgtaaata 31227405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 53621391 - 53621326
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  53621391 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 53621326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4698692 - 4698620
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||| |||||||||||||| ||| |||||||||| | |||| | ||||||||| | |||| |||| ||||||    
T  4698692 aaccagatacataaattattcaatgtatctaaaaattcaattgtttcttgtaaaaaggatcagagggagtatt 4698620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 71
Target Start/End: Complemental strand, 38687966 - 38687910
Alignment:
Q  15 attatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||| ||| |||||||||||| || | |||||||||||||||| |||||| ||||    
T  38687966 attattcaatgtatctaaaaagtcaactttctcttgtaaataagaccggagggagta 38687910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 52536014 - 52535950
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | | |||| |||||||||||||||| ||||    
T  52536014 atacatacattattcaatgtatctaaaaagttaactttttcttataaataagatcggagggagta 52535950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13775780 - 13775709
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||| |||||    
T  13775780 aaccaaatacataaattatttaatatatctaaaaagtaaattatctcttgtaaataggaccggagggagtat 13775709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 6761534 - 6761461
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  6761534 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 6761461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38598525 - 38598452
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||  |||||||    
T  38598525 aaccaaatacataaattatttaatatatataaaaagtaaattgtctcttgtaaataagaccggagaaagtatta 38598452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 30864754 - 30864826
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||  ||||| ||||||    
T  30864754 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagactggagggagtatt 30864826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29866151 - 29866080
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  29866151 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 29866080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16241346 - 16241416
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  16241346 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 16241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25892023 - 25892093
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  25892023 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44737361 - 44737431
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  44737361 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 44737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 18452638 - 18452566
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||  ||||||||||||    
T  18452638 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggactggaggtagtatt 18452566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11363077 - 11363132
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  11363077 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 11363132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 20427067 - 20427000
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  20427067 caaatacataaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 20427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39377905 - 39377834
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  39377905 aaccaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 39377834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43658004 - 43658059
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  43658004 aaccaaatacataaattatttaatgtatctaaaaagtaaattatctcttgtaaata 43658059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 41260094 - 41260024
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| || |||||| ||||    
T  41260094 aaccaaatacataaattatttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggagggagta 41260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 11711406 - 11711475
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||||||||||||||| ||||| ||||||||||| ||||||||||||| || |||||| ||||||    
T  11711406 caaatacataaattatttaatgtatcttaaaagtaaattgtctcttgtaaataggaccggagggagtatt 11711475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 32880976 - 32880915
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcg 62  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| |||||    
T  32880976 aaccaaatacataaattatttaatgtatataaaaagtaaattgtctcttgtaaataggatcg 32880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 40430745 - 40430809
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggag 65  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| || |||||    
T  40430745 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggag 40430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 42263549 - 42263621
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||  ||||| ||||||    
T  42263549 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagtatt 42263621  T

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Target: chr2; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 32750424 - 32750495
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||| |||| |||||||||||||| |  ||||||||||||| ||||||||| ||||||||    
T  32750424 caaatacataaattatgtaatgtatctaaaaagtaactcgtctcttgtaaataggatcggagggagtattaa 32750495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 45065663 - 45065714
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  45065663 aaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 45065714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 39377911 - 39377965
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  39377911 accaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaata 39377965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 32197445 - 32197380
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| |||||||||| |||||| | || |||||||| |||||||||    
T  32197445 aaccaaatacataaattatttaatgtatctaaaaaataaattgtttcatgtaaataggatcggagg 32197380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 41205569 - 41205642
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||||||||||||||||||||||||||||||| | |||| |||||| |||||| || | |||| |||||||    
T  41205569 aaccaaatacataaattatttaatatatctaaaaaattaattatctcttataaataggaccagaggaagtatta 41205642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 44737346 - 44737279
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| |||||| |||||||    
T  44737346 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataagaccggagggagtatta 44737279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 2100086 - 2100021
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| |||||||||| |||  | ||||||||||||| || ||||||    
T  2100086 aaccaaatacataaattatttaatgtatctaaaaaataacatgtctcttgtaaataggaccggagg 2100021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 3264981 - 3264936
Alignment:
Q  11 ataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||    
T  3264981 ataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 3264936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 4740778 - 4740709
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||| |||||||||||||||||| |||||||| |||| | ||||||||||| || |||||| ||||    
T  4740778 accaaatatataaattatttaatatatataaaaagttaattgtttcttgtaaataggaccggagggagta 4740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 7765876 - 7765928
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||| ||||||||| ||||||||||||||||| |||||| ||||||    
T  7765876 caaatacataatttatttaatgtatctaaaaagtaaattgtctcttataaata 7765928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1944613 - 1944668
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||| |||| |||||||||| |||||||||||||| || |||||||||||||    
T  1944613 aaccaaattcatatattatttaatgtatctaaaaagtaacttgtctcttgtaaata 1944668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27182144 - 27182073
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||| ||| ||||| |||| | |||| | |||||||||||||||| |||| |||||    
T  27182144 aaccaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27182073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 27831686 - 27831615
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||| ||| ||||| |||| | |||| | |||||||||||||||| |||| |||||    
T  27831686 aaccaaatacataaattattcaatgtatctgaaaaatcaattgtttcttgtaaataagatcagagggagtat 27831615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42341687 - 42341640
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctct 48  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  42341687 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtctct 42341640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 22857867 - 22857801
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||| ||| |||||||||||| |||| | |||||||  |||||||||||| ||||||    
T  22857867 atacataaattattcaatgtatctaaaaagtcaattgtttcttgtatttaagatcggagggagtatt 22857801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 33913220 - 33913188
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaa 33  Q
    |||||||||||||||||||||||||||||||||    
T  33913220 aaccaaatacataaattatttaatatatctaaa 33913188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 13775796 - 13775863
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||||||| |||||||||||| || | |||||| |||||| || |||||| |||||||    
T  13775796 atacatacattatttaatgtatctaaaaagtcaactttctcttataaataggaccggagggagtatta 13775863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 44736839 - 44736776
Alignment:
Q  10 cataaattatttaatatatctaaaaa-gtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||| | |||||||||||||| ||||||| | ||||||||||| ||||||||| |||||    
T  44736839 cataaattaatcaatatatctaaaaaagtaaattgtttcttgtaaataggatcggaggaagtat 44736776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 7765857 - 7765791
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||    
T  7765857 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 7765791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 32750405 - 32750339
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||    
T  32750405 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 32750339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 6761550 - 6761615
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  6761550 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 6761615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 72
Target Start/End: Complemental strand, 11363041 - 11362996
Alignment:
Q  27 atctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||||| || | ||||||||||||||||||||||| |||||    
T  11363041 atctaaaaagtcaactttctcttgtaaataagatcggagggagtat 11362996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 25892007 - 25891942
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | |||||| |||||| ||||||||| |||||    
T  25892007 atacatacattattcaatttatctaaaaagtcaactgtctcttataaataggatcggagggagtat 25891942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 30864717 - 30864664
Alignment:
Q  21 taatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||||||||||||| |||| |||||||| |||| || |||||| |||||||    
T  30864717 taatatatctaaaaagtcaattttctcttgtcaataggaccggagggagtatta 30864664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 38598536 - 38598605
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||| ||||||| |||||| ||| ||||||||||||||| | ||| ||||||||| || |||||| ||||    
T  38598536 accagatacatatattattcaatgtatctaaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 40430729 - 40430664
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||| |||||| ||||| ||| |||||    
T  40430729 atacatacattattgaatgtatctaaaaagtcaattttctcttataaataggatcgaagggagtat 40430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 41205553 - 41205488
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||| |||||||||||||| | || | |||||| ||||||||| || ||| |||||    
T  41205553 atacataaattattcaatatatctaaaaaatcaactttctcttataaataagaccgaaggaagtat 41205488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 43657988 - 43657923
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | |||||||||||||||  |||||| |||||    
T  43657988 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaataagtccggagggagtat 43657923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 16241330 - 16241266
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||    
T  16241330 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 16241266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 20427086 - 20427138
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||| |||||||||    
T  20427086 atacatacattattcaatgtatctaaaaagtcaattttctcttataaataaga 20427138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13144949 - 13144879
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  13144949 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 13144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29374239 - 29374169
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||||||    
T  29374239 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggatcggaggtagta 29374169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 15569410 - 15569481
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  15569410 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 15569481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25027763 - 25027692
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||    
T  25027763 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 25027692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41989633 - 41989562
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  41989633 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 41989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18353287 - 18353357
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||| ||||    
T  18353287 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggatcggagggagta 18353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 7053714 - 7053647
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  7053714 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 7053647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 7945906 - 7945831
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaac 76  Q
    ||||||||| |||||||||||||| ||||||||||||||||| | ||||||||||| || |||||| |||||||||    
T  7945906 aaccaaatatataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagtattaac 7945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 37699859 - 37699930
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||| |||||||    
T  37699859 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggatgtagtat 37699930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7749987 - 7749917
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| || |||||| ||||    
T  7749987 aaccaaatacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagta 7749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9601672 - 9601742
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  9601672 aaccaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31803037 - 31803107
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||| ||||    
T  31803037 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 31803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41046897 - 41046832
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| || ||||||    
T  41046897 aaccaaatacataaattatttaatgtatctaaaaagtagattgtctcttgtaaataggaccggagg 41046832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 42311889 - 42311954
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| |||| ||||    
T  42311889 aaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggatcagagg 42311954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6338394 - 6338449
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  6338394 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtcttttgtaaata 6338449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26898260 - 26898205
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||    
T  26898260 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaata 26898205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 14338884 - 14338826
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    |||||||||||||||||||||||| |||||||||| | |||| ||||||||||||||||    
T  14338884 aaccaaatacataaattatttaatttatctaaaaaattaattgtctcttgtaaataaga 14338826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 904045 - 904118
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | |||||||||  | |||||| |||||||    
T  904045 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttattgtaaatagaaccggagggagtatta 904118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 1643410 - 1643341
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||| || ||| ||||||||||||||||| ||| ||||||||| || |||||||||||||    
T  1643410 caaatacataaatttttcaatgtatctaaaaagtaaattgtctattgtaaataggaccggaggtagtatt 1643341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16089166 - 16089222
Alignment:
Q  1 aaccaaatacataaattatttaatatatct-aaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  16089166 aaccaaatacataaattatttaatatatctaaaaaaataaattgtctcttgtaaata 16089222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 1108348 - 1108297
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  1108348 aaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaata 1108297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20578734 - 20578789
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||    
T  20578734 aaccaaatacataaattatttaatgtatataaaaagtaaattgtctattgtaaata 20578789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 21610380 - 21610451
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||| |||||||| |||| | ||||||||||| || |||||| |||||    
T  21610380 aaccaaatacataaattatttaatgtatataaaaagttaattgtttcttgtaaataggaccggagggagtat 21610451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23411234 - 23411163
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| |||||||||||||| || | |||| |||||| || |||||| |||||    
T  23411234 aaccaaatacataaattatttaatgtatctaaaaagtaatttgtatcttataaatatgaccggagggagtat 23411163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 36419068 - 36419119
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||||    
T  36419068 aaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaata 36419119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 41815254 - 41815191
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    |||||||||||||||||||||||| ||| ||||||||||||| | | ||||||||| |||||||    
T  41815254 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtttattgtaaataggatcgga 41815191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 2959321 - 2959391
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||| |||||||||| ||||||||||||||||| | ||||||||||| || |||| | |||||||    
T  2959321 caaatacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtatta 2959391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 2967790 - 2967860
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||| |||||||||| ||||||||||||||||| | ||||||||||| || |||| | |||||||    
T  2967790 caaatacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtatta 2967860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 6910778 - 6910725
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataa 57  Q
    ||||||||||||||||||||| |||||||||| |||||| | ||||||||||||    
T  6910778 caaatacataaattatttaatgtatctaaaaaataaattgtttcttgtaaataa 6910725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 36417128 - 36417181
Alignment:
Q  3 ccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||| ||||||    
T  36417128 ccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttataaata 36417181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 23411250 - 23411317
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||| | |||| |||||||||||||||| |||||| |||||||    
T  23411250 atacatatattattcaatgtatctaaaaaatcaattttctcttgtaaataagaccggagggagtatta 23411317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21090455 - 21090520
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| ||| || ||||||  ||||||||    
T  21090455 aaccaaatacatacattatttaatgtatttaaaaagtaaattgtcttttttaaatagaatcggagg 21090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 2825929 - 2825874
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    |||||||||||||||||||||||| ||||||||||  ||||  ||||||||||||||||    
T  2825929 aaccaaatacataaattatttaatgtatctaaaaa-aaaat--tctcttgtaaataaga 2825874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 21090439 - 21090380
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || ||||||    
T  21090439 atacatacattattcaatgtatctaaaaagttaattttctcttgtaaataggaccggagg 21090380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 2825945 - 2826011
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||| | ||||||    
T  2825945 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggagcggaagaagtatt 2826011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 29374255 - 29374321
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||    
T  29374255 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtatt 29374321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 904021 - 903964
Alignment:
Q  15 attatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||| |||||||||||||||| || | ||||||||||||| || |||||| |||||    
T  904021 attattcaatatatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 903964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 6500048 - 6499987
Alignment:
Q  3 ccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcgga 64  Q
    |||||||||| |||||||||||| |||||||| || |||| | |||| |||||| |||||||    
T  6500048 ccaaatacatcaattatttaataaatctaaaatgtcaattgtttcttataaatatgatcgga 6499987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 1643429 - 1643497
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| || | |||||| |||||| || |||||| ||||||||    
T  1643429 atacatacattattgaatgtatctaaaaagtcaactgtctcttataaataggaccggagggagtattaa 1643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 26898274 - 26898342
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||| |||||| |||  ||||||||||| || | ||||||||||||| || |||||| ||||||    
T  26898274 aaatacatacattattcaatgcatctaaaaagtcaactttctcttgtaaataggaccggagggagtatt 26898342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37699843 - 37699779
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||    
T  37699843 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 37699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 38393837 - 38393889
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||| ||||||||||| ||||||| |||||||| |||| | |||||||||||    
T  38393837 caaattcataaattattcaatatatttaaaaagtcaattgtttcttgtaaata 38393889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26999090 - 26999020
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  26999090 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47449985 - 47449915
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  47449985 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 47449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 8243761 - 8243834
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  8243761 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 8243834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10049737 - 10049664
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  10049737 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtatta 10049664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 14768167 - 14768096
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  14768167 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 14768096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28945725 - 28945654
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| |||||    
T  28945725 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 28945654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 51698193 - 51698264
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||| |||||    
T  51698193 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcagagggagtat 51698264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9440207 - 9440277
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||||    
T  9440207 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 9440277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 6086980 - 6087049
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagt 70  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||| || ||||||||||    
T  6086980 aaccaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagt 6087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 49123013 - 49122948
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| || ||||||    
T  49123013 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 49122948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25846590 - 25846661
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||| || |||| |||||||    
T  25846590 aaccaaatacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccggaagtagtat 25846661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 52114103 - 52114158
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  52114103 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 52114158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8825800 - 8825742
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataaga 59  Q
    ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||    
T  8825800 aaccaaatacataaattatttaatatatctaaaaagtaattcgtctcttgtaaataaga 8825742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29019804 - 29019734
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||| || |||||| ||||    
T  29019804 aaccaaatacataaattatttaatgtatctaaaatgtaaattgtctcttgtaaataggaccggagggagta 29019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 25113428 - 25113493
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| || ||||||    
T  25113428 aaccaaatacataaattatttaatgtatcgaaaaagtaaattgtctcttgtaaataggaccggagg 25113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9190097 - 9190025
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||| ||||||||||  ||||||||||||| ||||| ||| ||||||    
T  9190097 aaccaaatacataaattatttaatgtatcttaaaagtaaatcgtctcttgtaaatatgatcgaaggaagtatt 9190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 40464591 - 40464539
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaa 53  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  40464591 aaccaaatacataaattatttaatttatctaaaaagtaaattgtctcttgtaa 40464539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 9465153 - 9465220
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||| || ||||||||||||||||| ||||||||||||| || |||||| ||||    
T  9465153 caaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21653423 - 21653478
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21653423 aaccaaatgcataaattatttaatgtatctaaaaagtaaattgtctcttgtaaata 21653478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23825218 - 23825147
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||||||||||||||| || ||||||||||||||||| | ||||||||||| ||| ||||| |||||    
T  23825218 aaccaaatacataaattatttgatgtatctaaaaagtaaattgtttcttgtaaataggattggagggagtat 23825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40141953 - 40142008
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  40141953 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 40142008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 379139 - 379069
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| |||||||||| | |||| ||||||||||||| || |||||| ||||    
T  379139 aaccaaatacataaattatttaatgtatctaaaaaattaattgtctcttgtaaataggaccggagggagta 379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 18765337 - 18765411
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||||||||||||||||||||  |||||||||||||||| | ||||||||||| || |||| | ||||||||    
T  18765337 aaccaaatacataaattatttaatgcatctaaaaagtaaattgtttcttgtaaataggaccggaaggagtattaa 18765411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19202329 - 19202399
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||| || |||||| ||||    
T  19202329 aaccaaatacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggagggagta 19202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28565014 - 28565088
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||||||||||||||||||||  ||||||||| |||||| ||||||||||||| || || ||| ||||||||    
T  28565014 aaccaaatacataaattatttaatgcatctaaaaaataaattgtctcttgtaaataggaccgaagggagtattaa 28565088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 335454 - 335518
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggag 65  Q
    |||||||||||||||||||||||| ||||||||||||||||| | | ||||||||| || |||||    
T  335454 aaccaaatacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggag 335518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 40214982 - 40215050
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||||||||||||||||| |||||||||||||| || |||||| |||||| || |||||| |||||    
T  40214982 caaatacataaattatttaatgtatctaaaaagtaacttgtctcttataaataggaccggagggagtat 40215050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 42605910 - 42605978
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||| || || |||||| ||||||    
T  42605910 aaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaagtaggaccggagggagtatt 42605978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 42225645 - 42225711
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||| |||| |||||||||||| | | |||||||||||| |||||| ||||    
T  42225645 aaatacataaattatttaatgtatcaaaaaagtaaattgttttttgtaaataagaccggagggagta 42225711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 8243745 - 8243677
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||||| |||| | ||||||||    
T  8243745 atacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaataagaccggatgaagtattaa 8243677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3484401 - 3484346
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||||||||| |||||||| |||||||||| | |||| |||||||||||||    
T  3484401 aaccaaatacataaactatttaatgtatctaaaaaattaattgtctcttgtaaata 3484346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 28945743 - 28945806
Alignment:
Q  9 acataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||| |||||| |||||||||||||||| |||| ||||||||||||| || |||||| |||||    
T  28945743 acatacattattgaatatatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 28945806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 23825234 - 23825300
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| ||||||||| ||||||    
T  23825234 atacatacattattcaatgtatctaaaaagtcaactttctcttgtaaatatgatcggagggagtatt 23825300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 10049753 - 10049818
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| |||||    
T  10049753 atacatacattattcaatgtatctaaaaagtcaattgtctcttgtaaataggaccggagggagtat 10049818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 44593280 - 44593321
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaatt 42  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  44593280 aaccaaatacataaattatttaatgtatctaaaaattaaatt 44593321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 26999106 - 26999174
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||||||    
T  26999106 atacatacattattcaatgtatctaaaaagtcaaatgtctcttgtaaataggaccggagggagtattaa 26999174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 55139253 - 55139317
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggagg 66  Q
    ||||||||||||||||||| ||||||||||||||||  ||| | |||| ||||||| | ||||||    
T  55139253 accaaatacataaattattcaatatatctaaaaagttgattgtttcttttaaataacaccggagg 55139317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 1122340 - 1122305
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaa 40  Q
    |||||||||||||||||||| |||||||||||||||    
T  1122340 aaatacataaattatttaatgtatctaaaaagtaaa 1122305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 74
Target Start/End: Complemental strand, 51698177 - 51698110
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||||    
T  51698177 atacatacattattgaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagtatta 51698110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 39341438 - 39341370
Alignment:
Q  7 atacataaattatttaata---tatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||||||||   |||||||||||| |||| ||||||||||||| || |||||| |||||    
T  39341438 atacatacattatttaataatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 39341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 6086964 - 6086899
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtat 72  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| |||||    
T  6086964 atacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 6086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 28406535 - 28406462
Alignment:
Q  2 accaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||||||| ||||||| ||   ||||||||||| |||| | ||||||||||| || |||||| ||||||||    
T  28406535 accaaatacattaattattcaacgaatctaaaaagtcaattgtttcttgtaaataggaccggagggagtattaa 28406462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 29019820 - 29019869
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||| |||||| ||| |||||||||||| |||| |||||||||||||    
T  29019820 atacatatattattcaatgtatctaaaaagtcaattttctcttgtaaata 29019869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 42841862 - 42841903
Alignment:
Q  15 attatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||| ||| ||||||||||||| |||||||||||||    
T  42841862 attatttaatgtatttaaaaagtaaattgtctcttgtaaata 42841903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 379158 - 379226
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||| ||| |||||||||||| || | |||||| |||||| || |||| | ||||||||    
T  379158 atacataaattattcaatgtatctaaaaagtcaactttctcttataaataggaccggaaggagtattaa 379226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8987808 - 8987844
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagt 37  Q
    |||||||||||||||||||| ||| ||||||||||||    
T  8987808 aaccaaatacataaattattgaatgtatctaaaaagt 8987844  T

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Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 16660359 - 16660414
Alignment:
Q  1 aaccaaatacataaatt--atttaatatatctaaaaagtaaattctctcttgtaaa 54  Q
    |||||||||||||||||  ||||||| ||||||||||||||||  |||||| ||||    
T  16660359 aaccaaatacataaattttatttaatgtatctaaaaagtaaatcgtctcttctaaa 16660414  T

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Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 19880917 - 19880869
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaa 53  Q
    |||||||||||||||||||| ||||||||| || |||| | ||||||||    
T  19880917 aaatacataaattatttaatgtatctaaaacgtcaattgtttcttgtaa 19880869  T

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Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 22003881 - 22003945
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||| ||| |||||||||||| |||| ||| || |||||| || |||||| ||||    
T  22003881 atacataaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22003945  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 22011398 - 22011462
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||| ||| |||||||||||| |||| ||| || |||||| || |||||| ||||    
T  22011398 atacataaattattcaatgtatctaaaaagtcaattttctgttataaataggaccggaggaagta 22011462  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 39341457 - 39341509
Alignment:
Q  4 caaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||| |||||||||||||||||||||||| ||||  | | |||||||||||    
T  39341457 caaatatataaattatttaatatatctaaaatgtaacgtatttcttgtaaata 39341509  T

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Target: scaffold0024 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 36019 - 35949
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||| || |||||| ||||||||    
T  36019 aaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtattaa 35949  T

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Target: scaffold0221 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11099 - 11026
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | || |||||| |||||||    
T  11099 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaaaaggaccggagggagtatta 11026  T

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Target: scaffold0221; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 11115 - 11179
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    ||||||| |||||| ||| |||||||||||| || | ||||||||||||| || |||||| ||||    
T  11115 atacatatattattcaatgtatctaaaaagtcaactttctcttgtaaataggaccggagggagta 11179  T

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Target: scaffold0144 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38894 - 38821
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||| || || ||||| ||||||||    
T  38894 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaactaggaccggagatagtatta 38821  T

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Target: scaffold0123 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29313 - 29243
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||| ||||    
T  29313 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 29243  T

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Target: scaffold0592 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 448 - 375
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |||||| |||||||||| ||| | |||||||    
T  448 aaccatatatataaattatttaatatatctaaaaagtaaattttctcttataaataagattggatgaagtatta 375  T

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Target: scaffold0592; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 464 - 530
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    ||||||| |||||| ||| |||||||||||| ||   ||||||||||||| ||||||||| ||||||    
T  464 atacatacattattcaatgtatctaaaaagtcaaccttctcttgtaaataggatcggagggagtatt 530  T

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Target: scaffold0002 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 492384 - 492456
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatt 73  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||  ||||| ||||||    
T  492384 aaccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagtatt 492456  T

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Target: scaffold2107 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 508 - 457
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  508 aaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaata 457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 528 - 596
Alignment:
Q  7 atacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtattaa 75  Q
    ||||||| |||||| ||| |||||||||||| |||| ||||||||||||| || |||||| ||||||||    
T  528 atacatacattattcaatgtatctaaaaagtcaattttctcttgtaaataggaccggagggagtattaa 596  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 3729 - 3775
Alignment:
Q  11 ataaattatttaatatatctaaaaagtaaattctctcttgtaaataa 57  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  3729 ataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataa 3775  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 77424 - 77496
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaataagatcggaggtagtatta 74  Q
    |||||||||||||||||||||||| |||||||||| | |||| |||||| |||||| || |||||| |||||||    
T  77424 aaccaaatacataaattatttaatgtatctaaaaa-ttaattgtctcttataaataggaccggagggagtatta 77496  T

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Target: scaffold0246 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15224 - 15169
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    |||||||||||||||||||||||| ||||||||||| ||||| | | |||||||||    
T  15224 aaccaaatacataaattatttaatgtatctaaaaagcaaattgtttattgtaaata 15169  T

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Target: scaffold0067 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5285 - 5230
Alignment:
Q  1 aaccaaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||| ||||||||||||||||||  |||||||||||| | |||||||||||    
T  5285 aaccaaatatataaattatttaatatattaaaaaagtaaattgtttcttgtaaata 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 5299 - 5350
Alignment:
Q  5 aaatacataaattatttaatatatctaaaaagtaaattctctcttgtaaata 56  Q
    ||||||||| |||||| ||| |||||||||||| |||| |||||||||||||    
T  5299 aaatacatatattattcaatttatctaaaaagttaattttctcttgtaaata 5350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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