View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4171_low_11 (Length: 296)
Name: NF4171_low_11
Description: NF4171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4171_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 19 - 227
Target Start/End: Original strand, 30007498 - 30007706
Alignment:
| Q |
19 |
atattggcggctctaaagccattacagaagccaattgtcggttctcaagtacctcgaccgactacatcaggtaggcatgggaaggcgcaaccaccagctg |
118 |
Q |
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| T |
30007498 |
atattggcggctctaaagccattacagaagccaattgtcggttctcaagtgcctcgaccgactacatcaggtaggcacgggaaggcgcaaccaccagctg |
30007597 |
T |
|
| Q |
119 |
cagaaagataggaaataatcatacaactaaccaaatgtttgctcattttactactaataaaaatggaggactttgctgtatagtacattttaaatgaaaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30007598 |
cagaaagataggaaataatcatacaactaaccaaatgtttgctcattttactactaataaaaatggaggactttgctgtatagtacattttaaatgaaaa |
30007697 |
T |
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| Q |
219 |
aatttgagt |
227 |
Q |
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||||||||| |
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| T |
30007698 |
aatttgagt |
30007706 |
T |
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