View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4171_low_20 (Length: 240)

Name: NF4171_low_20
Description: NF4171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4171_low_20
NF4171_low_20
[»] chr2 (32 HSPs)
chr2 (67-139)||(6077251-6077323)
chr2 (4-85)||(17449713-17449794)
chr2 (4-85)||(3044920-3045001)
chr2 (4-85)||(37199600-37199681)
chr2 (13-85)||(11942947-11943019)
chr2 (8-80)||(13873990-13874062)
chr2 (8-80)||(14014115-14014187)
chr2 (34-93)||(28168240-28168298)
chr2 (19-78)||(31364528-31364587)
chr2 (8-83)||(43439803-43439878)
chr2 (4-54)||(4437979-4438029)
chr2 (4-85)||(34173714-34173795)
chr2 (4-84)||(13873309-13873389)
chr2 (4-84)||(14013434-14013514)
chr2 (4-80)||(37009660-37009736)
chr2 (8-84)||(37330379-37330455)
chr2 (7-50)||(10356488-10356531)
chr2 (13-84)||(11563790-11563861)
chr2 (13-84)||(26196891-26196961)
chr2 (4-83)||(34173041-34173119)
chr2 (4-54)||(7939994-7940044)
chr2 (13-83)||(31709747-31709817)
chr2 (4-85)||(64307-64386)
chr2 (13-62)||(1366422-1366471)
chr2 (39-84)||(18997227-18997272)
chr2 (4-85)||(33146703-33146784)
chr2 (13-89)||(35954004-35954080)
chr2 (4-85)||(42791445-42791526)
chr2 (8-84)||(8726720-8726795)
chr2 (4-84)||(33146028-33146108)
chr2 (13-57)||(36451638-36451682)
chr2 (4-84)||(44332383-44332463)
[»] chr3 (36 HSPs)
chr3 (4-83)||(54606424-54606503)
chr3 (13-84)||(47794661-47794732)
chr3 (4-84)||(1364052-1364132)
chr3 (4-88)||(44500043-44500127)
chr3 (4-83)||(11581833-11581912)
chr3 (4-89)||(18365281-18365366)
chr3 (13-80)||(27396693-27396760)
chr3 (13-83)||(16067221-16067291)
chr3 (6-87)||(19547032-19547113)
chr3 (4-86)||(25481196-25481280)
chr3 (4-89)||(32255725-32255810)
chr3 (4-85)||(37183073-37183154)
chr3 (4-85)||(40036396-40036477)
chr3 (8-80)||(1763643-1763715)
chr3 (4-84)||(18364626-18364706)
chr3 (4-83)||(291783-291862)
chr3 (4-83)||(4558029-4558108)
chr3 (4-83)||(5963054-5963133)
chr3 (4-87)||(10887703-10887786)
chr3 (13-84)||(33115243-33115314)
chr3 (4-83)||(40974033-40974112)
chr3 (4-82)||(30605346-30605424)
chr3 (4-86)||(40927487-40927569)
chr3 (4-50)||(41587311-41587357)
chr3 (6-83)||(4756992-4757069)
chr3 (13-58)||(28247528-28247573)
chr3 (13-54)||(32373322-32373363)
chr3 (4-85)||(49080609-49080690)
chr3 (4-84)||(3090418-3090498)
chr3 (7-83)||(6293203-6293279)
chr3 (13-85)||(7725415-7725487)
chr3 (4-84)||(11345359-11345439)
chr3 (4-84)||(14602110-14602190)
chr3 (39-83)||(33114600-33114644)
chr3 (11-86)||(33979288-33979363)
chr3 (13-81)||(44950995-44951063)
[»] chr6 (28 HSPs)
chr6 (7-85)||(32114411-32114489)
chr6 (11-84)||(14224498-14224571)
chr6 (4-84)||(10702935-10703015)
chr6 (4-84)||(12693839-12693919)
chr6 (4-84)||(21802605-21802685)
chr6 (8-83)||(6936370-6936444)
chr6 (4-83)||(7448891-7448970)
chr6 (4-87)||(25527720-25527803)
chr6 (7-85)||(3767750-3767828)
chr6 (8-85)||(4101129-4101204)
chr6 (4-86)||(33276409-33276490)
chr6 (4-85)||(32522504-32522585)
chr6 (4-87)||(2522659-2522742)
chr6 (13-83)||(11722047-11722117)
chr6 (8-83)||(12766941-12767016)
chr6 (4-83)||(17336824-17336903)
chr6 (8-85)||(4126492-4126567)
chr6 (4-86)||(10702262-10702344)
chr6 (4-62)||(24619923-24619981)
chr6 (4-89)||(14306780-14306865)
chr6 (4-89)||(14313180-14313265)
chr6 (13-62)||(34250078-34250127)
chr6 (4-84)||(11522793-11522873)
chr6 (4-84)||(12026198-12026278)
chr6 (4-84)||(14313850-14313930)
chr6 (4-84)||(22022275-22022355)
chr6 (4-84)||(33950219-33950299)
chr6 (13-84)||(34794532-34794603)
[»] chr7 (39 HSPs)
chr7 (13-82)||(36848507-36848576)
chr7 (4-88)||(19156076-19156160)
chr7 (4-88)||(20755475-20755559)
chr7 (4-85)||(32867903-32867983)
chr7 (4-84)||(10412556-10412636)
chr7 (5-85)||(27144842-27144922)
chr7 (8-83)||(3341445-3341520)
chr7 (13-84)||(40344446-40344517)
chr7 (11-84)||(40189072-40189145)
chr7 (4-84)||(25607612-25607692)
chr7 (4-83)||(2790075-2790154)
chr7 (4-55)||(33869216-33869267)
chr7 (13-83)||(10412665-10412735)
chr7 (13-83)||(38669990-38670060)
chr7 (7-88)||(22711624-22711705)
chr7 (4-84)||(6184646-6184725)
chr7 (5-85)||(14753878-14753958)
chr7 (13-84)||(25956-26027)
chr7 (9-84)||(28307991-28308066)
chr7 (4-83)||(29823325-29823404)
chr7 (4-83)||(32388148-32388227)
chr7 (13-84)||(42813588-42813659)
chr7 (4-83)||(48982539-48982618)
chr7 (4-78)||(20261582-20261656)
chr7 (4-50)||(28308671-28308717)
chr7 (4-83)||(29103515-29103595)
chr7 (5-83)||(36687292-36687369)
chr7 (8-82)||(36890087-36890161)
chr7 (13-83)||(38790750-38790820)
chr7 (6-84)||(40401554-40401632)
chr7 (8-88)||(24679892-24679973)
chr7 (16-85)||(31388141-31388210)
chr7 (4-84)||(5228639-5228719)
chr7 (7-83)||(8535437-8535513)
chr7 (8-84)||(11639890-11639966)
chr7 (4-52)||(16425363-16425411)
chr7 (4-84)||(27144175-27144255)
chr7 (4-84)||(29615510-29615590)
chr7 (7-83)||(40400897-40400973)
[»] chr1 (34 HSPs)
chr1 (4-84)||(46682668-46682748)
chr1 (4-87)||(18407202-18407285)
chr1 (7-80)||(43504462-43504535)
chr1 (8-84)||(36605405-36605481)
chr1 (13-88)||(4007542-4007617)
chr1 (13-80)||(28045154-28045221)
chr1 (11-54)||(36512066-36512109)
chr1 (6-84)||(19071706-19071783)
chr1 (6-84)||(19119596-19119673)
chr1 (4-85)||(16536364-16536445)
chr1 (13-58)||(27226335-27226380)
chr1 (13-82)||(33475639-33475708)
chr1 (4-85)||(51362487-51362567)
chr1 (4-84)||(8061020-8061099)
chr1 (4-84)||(17109299-17109378)
chr1 (4-84)||(38011854-38011934)
chr1 (4-84)||(45737993-45738073)
chr1 (8-84)||(47216051-47216126)
chr1 (4-83)||(41321507-41321586)
chr1 (4-83)||(43319910-43319989)
chr1 (8-83)||(47291567-47291642)
chr1 (4-83)||(47553131-47553210)
chr1 (4-85)||(13573491-13573572)
chr1 (11-84)||(33126178-33126251)
chr1 (4-85)||(36604719-36604800)
chr1 (13-86)||(41322205-41322278)
chr1 (4-85)||(41575166-41575247)
chr1 (39-88)||(47553851-47553900)
chr1 (4-84)||(794748-794828)
chr1 (4-84)||(15356927-15357007)
chr1 (4-60)||(29510479-29510535)
chr1 (12-84)||(33113106-33113178)
chr1 (13-85)||(42830530-42830602)
chr1 (4-96)||(50143366-50143458)
[»] chr4 (36 HSPs)
chr4 (4-82)||(17729507-17729585)
chr4 (4-83)||(48372410-48372489)
chr4 (14-85)||(55140021-55140091)
chr4 (4-85)||(7478665-7478744)
chr4 (4-86)||(17722742-17722824)
chr4 (4-82)||(35667567-35667645)
chr4 (4-85)||(13771711-13771792)
chr4 (4-85)||(16960198-16960279)
chr4 (9-85)||(36687244-36687321)
chr4 (4-84)||(26809047-26809127)
chr4 (6-86)||(33047232-33047312)
chr4 (4-88)||(45847768-45847852)
chr4 (4-84)||(47030483-47030563)
chr4 (13-84)||(6232415-6232486)
chr4 (4-87)||(8138993-8139076)
chr4 (4-83)||(13482178-13482257)
chr4 (13-84)||(13772392-13772463)
chr4 (4-83)||(17730181-17730260)
chr4 (6-81)||(25008218-25008292)
chr4 (3-50)||(41919908-41919955)
chr4 (4-82)||(19313341-19313419)
chr4 (4-54)||(30192533-30192583)
chr4 (4-82)||(35667382-35667460)
chr4 (4-50)||(37708803-37708849)
chr4 (13-83)||(47930555-47930624)
chr4 (13-83)||(55069524-55069594)
chr4 (8-85)||(721984-722061)
chr4 (4-85)||(32448941-32449022)
chr4 (7-52)||(47931234-47931279)
chr4 (4-84)||(8192991-8193071)
chr4 (4-84)||(16192316-16192396)
chr4 (4-84)||(26705670-26705750)
chr4 (9-84)||(36687884-36687960)
chr4 (4-84)||(55068837-55068917)
chr4 (7-47)||(55139382-55139422)
chr4 (13-85)||(56310076-56310148)
[»] chr8 (28 HSPs)
chr8 (4-85)||(31846442-31846523)
chr8 (4-87)||(14093474-14093557)
chr8 (4-86)||(36016083-36016165)
chr8 (4-85)||(40791041-40791122)
chr8 (4-83)||(29459259-29459338)
chr8 (13-83)||(14879517-14879587)
chr8 (4-85)||(41311666-41311746)
chr8 (1-85)||(3075127-3075211)
chr8 (13-85)||(6099334-6099405)
chr8 (4-80)||(6099477-6099553)
chr8 (4-84)||(13421437-13421517)
chr8 (4-84)||(17564664-17564744)
chr8 (6-84)||(3075302-3075380)
chr8 (4-82)||(3075967-3076045)
chr8 (4-86)||(12336293-12336375)
chr8 (7-85)||(17565342-17565420)
chr8 (4-50)||(40791756-40791802)
chr8 (8-54)||(43764104-43764150)
chr8 (4-50)||(44746840-44746886)
chr8 (8-85)||(8628056-8628133)
chr8 (14-83)||(13573789-13573858)
chr8 (4-85)||(39998365-39998446)
chr8 (4-60)||(8437917-8437973)
chr8 (4-84)||(22934285-22934365)
chr8 (4-80)||(31739509-31739585)
chr8 (4-84)||(32904220-32904300)
chr8 (4-84)||(32905328-32905408)
chr8 (4-84)||(41312381-41312461)
[»] scaffold0695 (1 HSPs)
scaffold0695 (4-87)||(2890-2973)
[»] scaffold0006 (1 HSPs)
scaffold0006 (4-85)||(161250-161331)
[»] scaffold0068 (1 HSPs)
scaffold0068 (4-84)||(59254-59334)
[»] chr5 (24 HSPs)
chr5 (4-84)||(14594063-14594143)
chr5 (4-84)||(19408533-19408613)
chr5 (13-83)||(3933988-3934058)
chr5 (4-85)||(4877375-4877456)
chr5 (4-84)||(13280147-13280227)
chr5 (2-54)||(22730429-22730481)
chr5 (4-84)||(27979900-27979980)
chr5 (4-84)||(36737449-36737529)
chr5 (8-83)||(17780341-17780416)
chr5 (13-83)||(8572694-8572764)
chr5 (13-83)||(14594752-14594822)
chr5 (9-63)||(27301875-27301929)
chr5 (13-83)||(31476974-31477044)
chr5 (7-87)||(32348507-32348584)
chr5 (7-76)||(20570831-20570900)
chr5 (13-86)||(36854337-36854409)
chr5 (13-50)||(38497356-38497393)
chr5 (4-85)||(42598315-42598396)
chr5 (4-85)||(42598988-42599069)
chr5 (7-83)||(6031352-6031428)
chr5 (8-84)||(13685962-13686038)
chr5 (13-89)||(20259322-20259398)
chr5 (8-84)||(21639012-21639088)
chr5 (4-84)||(22731060-22731140)
[»] scaffold0289 (1 HSPs)
scaffold0289 (4-87)||(3399-3482)
[»] scaffold0051 (2 HSPs)
scaffold0051 (4-82)||(10964-11042)
scaffold0051 (4-84)||(11630-11710)
[»] scaffold0340 (1 HSPs)
scaffold0340 (4-97)||(12860-12953)
[»] scaffold0034 (1 HSPs)
scaffold0034 (4-84)||(25900-25980)
[»] scaffold0003 (2 HSPs)
scaffold0003 (4-84)||(421141-421221)
scaffold0003 (4-52)||(14075-14123)
[»] scaffold0115 (1 HSPs)
scaffold0115 (4-87)||(31354-31437)
[»] scaffold0102 (1 HSPs)
scaffold0102 (13-84)||(27012-27083)
[»] scaffold0189 (1 HSPs)
scaffold0189 (4-50)||(11317-11363)
[»] scaffold0368 (1 HSPs)
scaffold0368 (13-85)||(10586-10658)
[»] scaffold0201 (1 HSPs)
scaffold0201 (4-84)||(15329-15409)
[»] scaffold0105 (1 HSPs)
scaffold0105 (4-84)||(19647-19727)


Alignment Details
Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 6077323 - 6077251
Alignment:
Q  67 gagagtgtaatttactcttattaatttgatttgattaaatgcataaaacttgcgtttaattgataattatgat 139  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6077323 gagagtgtaatttactcttattaatttgatttgattaaatgcataaaacttacgtttaattgataattatgat 6077251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 17449794 - 17449713
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||| | ||||||||||||||||||| || ||| | || |||  ||||||||||||||||    
T  17449794 aggggagtgtatattttaacataagaagggagaatagtgtaattcaaatatatttgaagagaaggaagtgtaatttactctt 17449713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 3045001 - 3044920
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| ||| || |  ||||||||||||||||    
T  3045001 aggggagtgtatattttaacataagaggtgaggagagtgtaattcaagcatctttgagggaagggaagtgtaatttactctt 3044920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 37199600 - 37199681
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||||||| ||| |||  | | |||||||||||||||||    
T  37199600 aggggagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactctt 37199681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 11942947 - 11943019
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||| ||||||||  ||| |||||||||||| |||||||  | |||| ||||||||||||||    
T  11942947 tatattttaacataaaaggagagatgagtataattcaaacatctttaaggggaggagaatgtaatttactctt 11943019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 13873990 - 13874062
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||| ||||||||||||||||||  ||||| |||||||||||||||| ||||| || | | ||||||||||||    
T  13873990 gagtgtatattttaacataagagaggagaagagtgtaattcaaacatctttaaagagaggggagtgtaattta 13874062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 14014115 - 14014187
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||| ||||||||||||||||||  ||||| |||||||||||||||| ||||| || | | ||||||||||||    
T  14014115 gagtgtatattttaacataagagaggagaagagtgtaattcaaacatctttaaagagaggggagtgtaattta 14014187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 28168240 - 28168298
Alignment:
Q  34 agaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttattaattt 93  Q
    |||| |||||||||||| |||||| |||| || |||||||||||||||||||||||||||    
T  28168240 agaagagtgtaattcaagcattttgaagggaa-gagagtgtaatttactcttattaattt 28168298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 31364528 - 31364587
Alignment:
Q  19 ttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatt 78  Q
    ||||||||||||||||||  |||||||||||||||| |||||||| | | ||||||||||    
T  31364528 ttaacataagaggagagaggagtgtaattcaaacatctttaaggagaggggagtgtaatt 31364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 43439803 - 43439878
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| |||||||||||||||||||||||  |||||||||| |  ||| ||||||| || | |||||||||||||||    
T  43439803 gagtgtatattttaacataagaggagagggtagtgtaatttacgcatctttaagggaaggggagtgtaatttactc 43439878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 4437979 - 4438029
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||||||    
T  4437979 aggggagtgtatattttaacataagaggggagaggagtgtaattcaaacat 4438029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 34173714 - 34173795
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||||||| ||| |||  | | |||||||||||||||||    
T  34173714 aggggaatgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactctt 34173795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 13873389 - 13873309
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   | |||||||||| ||| ||| ||| || | ||||||||||||||||    
T  13873389 aggggagtgtatattttaacataagaggtgagggaattgtaattcaagcatctttgagggaaggggagtgtaatttactct 13873309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 14013514 - 14013434
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   | |||||||||| ||| ||| ||| || | ||||||||||||||||    
T  14013514 aggggagtgtatattttaacataagaggtgagggaattgtaattcaagcatctttgagggaaggggagtgtaatttactct 14013434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 37009660 - 37009736
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||| || ||| ||| ||| || | ||||||||||||    
T  37009660 aggggagtgtatattttaacataagaggggagaggagtgtaatttaagcatctttgagggaaggggagtgtaattta 37009736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 37330379 - 37330455
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||||||||||||||||||||||  | |||||||||||| ||| ||| | | || ||||| ||||||||||||    
T  37330379 gagtgtatattttaacataagaggagaagagagtgtaattcaagcatctttgaaggaaggagagcgtaatttactct 37330455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 10356531 - 10356488
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||    
T  10356531 ggagtgtatattttaacataagaggagagataagtgtaattcaa 10356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 11563861 - 11563790
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||| ||  | |||||||||||| ||| ||| |||  | ||||||||||||||||||    
T  11563861 tatattttaacataagaggggatgagagtgtaattcaagcatctttgaggggaggagagtgtaatttactct 11563790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 26196891 - 26196961
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||| || |  |||||||||||||||||| || || | | ||||||||||||||||    
T  26196891 tatattttaacataagaggaaaggagggtgtaattcaaacattttgaa-gagatgtgagtgtaatttactct 26196961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 34173119 - 34173041
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| |||  ||||||||||||| ||| ||| |||   || |||||||||||||||    
T  34173119 aggggagtgtatattttaacataagaggggagggtagtgtaattcaagcatctttgagg-ggagggagtgtaatttactc 34173041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 7939994 - 7940044
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    |||||||| ||||||||||||||| ||| ||| | ||||||||||||||||    
T  7939994 aggggagtgtatattttaacataaaaggggaggagagtgtaattcaaacat 7940044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31709747 - 31709817
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| ||||  ||||||||| || ||| ||| ||| || | |||||||||||||||    
T  31709747 tatattttaacataagaggggagaggagtgtaatttaagcatctttgagggaaggggagtgtaatttactc 31709817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 64386 - 64307
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| |||||||||| ||| ||||| |||| |||||||||||||||| ||||||  ||||| | ||||||||||||||    
T  64386 agggaagtgtatattttaatata-gaggaaagaa-agtgtaattcaaacatctttaagagaaagaaaatgtaatttactctt 64307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 1366422 - 1366471
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaagg 62  Q
    ||||||||||||||||||  ||| | |||||||||||||||| |||||||    
T  1366422 tatattttaacataagagaggaggagagtgtaattcaaacatctttaagg 1366471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 18997227 - 18997272
Alignment:
Q  39 agtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||| | | || ||||||||||||||||||    
T  18997227 agtgtaattcaaacattttttatggaaggagagtgtaatttactct 18997272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 33146703 - 33146784
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||||  |||||| |||||  || ||| |||  | | |||||||||||||||||    
T  33146703 aggggagtgtatattttaacataagaggggagaggagtgtagttcaagtatctttgaggggaggggagtgtaatttactctt 33146784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 89
Target Start/End: Original strand, 35954004 - 35954080
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacat-ttttaaggaaaagagagtgtaatttactcttatta 89  Q
    ||||||||||||||||||| |||   |||||||||||||||| ||||||||  | | ||||||||||||||| |||||    
T  35954004 tatattttaacataagaggggagggaagtgtaattcaaacatcttttaagg-gaggggagtgtaatttactcatatta 35954080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 42791526 - 42791445
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||| | ||||||||||||||||||| ||||  |||||||||||| ||| ||  |||  | | |||||||||||||||||    
T  42791526 aggggattgtatattttaacataagaggggagagaagtgtaattcaagcatcttagaggggaggggagtgtaatttactctt 42791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 8726795 - 8726720
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| |||||||||||||| ||||||||   ||| |||||||| ||| ||||| || ||| ||||||||||||||||    
T  8726795 gagtgtatattttaacata-gaggagagtgaagtataattcaagcatctttaaagagaagtgagtgtaatttactct 8726720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 33146108 - 33146028
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||| ||||||| ||| ||| |||  | | ||||||||||||||||    
T  33146108 aggggagtgtatattttaacataagaggggaggggagtgcaattcaagcatctttgaggggaggggagtgtaatttactct 33146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 36451638 - 36451682
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttt 57  Q
    ||||||||||||||| |||||||   |||||||||||||||||||    
T  36451638 tatattttaacataaaaggagagtgaagtgtaattcaaacatttt 36451682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 44332383 - 44332463
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| | | |||  | | ||||||||||||||||    
T  44332383 aggggagtgtatattttaacataagaggggatgagagtgtaattcaagcatctctgagggcaggggagtgtaatttactct 44332463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 54606424 - 54606503
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| |||||||||||||||||||||||   |||||||||||||||||||| |||  | |||||||||||||||||    
T  54606424 aggggagtgtatattttaacataagaggagaggggagtgtaattcaaacattttttaggggaggagagtgtaatttactc 54606503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 47794661 - 47794732
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||||||   |||||||||||||||| |||||||  | ||||||||||||||||||    
T  47794661 tatattttaacataagaggagaggggagtgtaattcaaacatctttaaggggaggagagtgtaatttactct 47794732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 1364052 - 1364132
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||||||    |||||||||||||||| ||| || | ||| ||||||||||||||||    
T  1364052 aggggagtgtatattttaacataagaggagatgggagtgtaattcaaacatctttgagaagaagggagtgtaatttactct 1364132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 44500043 - 44500127
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||| ||| ||| ||| || ||||||||||||||||||||||    
T  44500043 agggaagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagggaaggagagtgtaatttactcttatt 44500127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 11581912 - 11581833
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| ||||  | |||||||||||||| |||||||| | |  ||||||||||||||    
T  11581912 aggggagtgtatattttaacataagaggggagagaaatgtaattcaaacatctttaaggagagggaagtgtaatttactc 11581833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 18365281 - 18365366
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatta 89  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | |||||||||||||||||||||    
T  18365281 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcttatta 18365366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 27396760 - 27396693
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    ||||||||||||||||||| ||||  |||||||||||| ||| ||| ||| || ||||||||||||||    
T  27396760 tatattttaacataagaggggagatgagtgtaattcaagcatctttgagggaaggagagtgtaattta 27396693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 16067291 - 16067221
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| ||| | |||||||||||||||| ||||| |  | | |||||||||||||||    
T  16067291 tatattttaacataagaggggaggagagtgtaattcaaacatctttaaagggaggcgagtgtaatttactc 16067221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 19547032 - 19547113
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||| ||||||||||||||||||  |||||||||||||||||| ||| ||| |||  | | || | ||||||||||||||    
T  19547032 gggagtgtatattttaacataagagaggagaatagtgtaattcaagcatctttgaggggaggggaatataatttactcttat 19547113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 25481196 - 25481280
Alignment:
Q  4 aggggagtatatattttaacataagaggagaga--atagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||| ||| ||||||||||||||||||||||||   ||||||||||||| ||| ||| |||  | | ||||||||||||||||||    
T  25481196 agggaagtgtatattttaacataagaggagagagggtagtgtaattcaagcatctttgaggcgaggggagtgtaatttactctta 25481280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 32255725 - 32255810
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatta 89  Q
    |||| |||||||||||||||||||||||||||   |||||||||||| ||| ||| |||  | |  ||||||||||||| ||||||    
T  32255725 agggaagtatatattttaacataagaggagagggaagtgtaattcaagcatctttgaggggagggaagtgtaatttacttttatta 32255810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 37183154 - 37183073
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||||||| ||| |||  | | |||||||||||||||||    
T  37183154 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaaacatctttgaggggaggggagtgtaatttactctt 37183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 40036396 - 40036477
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   | |||||||||| ||| ||| |||  | |||||||||||||||||||    
T  40036396 aggggagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgagggtaggagagtgtaatttactctt 40036477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 1763715 - 1763643
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||| ||||||||||||||| | | ||| | |||||||||||||||| ||| ||| || ||||||||||||||    
T  1763715 gagtgtatattttaacataaaaagggaggaaagtgtaattcaaacatctttgagggaaggagagtgtaattta 1763643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 18364706 - 18364626
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  18364706 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 18364626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 291783 - 291862
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||| ||||||||||| ||| |  ||||||||||| ||||||| |||  | | |||||||||||||||    
T  291783 aggggagtgtatatttgaacataagaggggaggagggtgtaattcaagcatttttgaggggaggggagtgtaatttactc 291862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 4558108 - 4558029
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| |||||||  | | |||||||||||||||    
T  4558108 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttaaggggaggggagtgtaatttactc 4558029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 5963133 - 5963054
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| ||||  |||| ||||||| | | | | ||| || |||||||||||||||||    
T  5963133 aggggagtgtatattttaacataagaggggagaggagtgcaattcaagcttgtgtcagggaaggagagtgtaatttactc 5963054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 10887786 - 10887703
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | |||||||||||||||||||    
T  10887786 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactcttat 10887703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 33115243 - 33115314
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||| |||   |||||||||||| ||| ||| || | | ||||||||||||||||||    
T  33115243 tatattttaacataagaggggagggaagtgtaattcaagcatctttgagaagaggagagtgtaatttactct 33115314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 40974112 - 40974033
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||||||| ||  |||  | |||||||||||||||||    
T  40974112 aggggattgtatattttaacataagaggggaggggagtgtaattcaaacatcttagaggggaggagagtgtaatttactc 40974033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 30605346 - 30605424
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||| ||| ||||||||||||||||||  |||   |||||||||||||||| ||| ||| || | ||||||||||||||    
T  30605346 agggaagtgtatattttaacataagagtggaggggagtgtaattcaaacatctttgagggaaggggagtgtaatttact 30605424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 40927569 - 40927487
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||  |||  | | ||||||||||||||||||    
T  40927569 aggggagtgtatattttaacataagaggggagggaagtgtaattcaagcatcttagaggggaggggagtgtaatttactctta 40927487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 41587311 - 41587357
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  41587311 aggggagtgtatattttaacataagaggggagaggagtgtaattcaa 41587357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 4757069 - 4756992
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||| ||||||||||| ||||||| ||| | |||||||||||||||| ||| |||  |   |||||||||||||||    
T  4757069 gggagtgtatattttaacttaagaggggaggagagtgtaattcaaacatctttgaggggagaggagtgtaatttactc 4756992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 28247573 - 28247528
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacattttt 58  Q
    |||||||||||||||||||||||   |||||||||||| |||||||    
T  28247573 tatattttaacataagaggagagggaagtgtaattcaatcattttt 28247528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 32373363 - 32373322
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    |||||||||||||||||| | |||| ||||||||||||||||    
T  32373363 tatattttaacataagagaatagaagagtgtaattcaaacat 32373322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 49080609 - 49080690
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   | |||||||||| ||| ||| ||   | |||||||||||||||||||    
T  49080609 aggggagtgtatattttaacataagaggggaggggaatgtaattcaagcatctttgagaggaggagagtgtaatttactctt 49080690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 3090418 - 3090498
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||| ||||||| ||| ||| |||  | | ||||||||||||||||    
T  3090418 aggggagtgtatattttaacataagaggggaggggagtgcaattcaagcatctttgaggggaggggagtgtaatttactct 3090498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 6293279 - 6293203
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||| ||||||||||||||||||| |||   | |||||||||||||| ||| | | || | |||||||||||||||    
T  6293279 ggagtgtatattttaacataagaggggagggaaatgtaattcaaacatctttgaaggaaggggagtgtaatttactc 6293203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 7725415 - 7725487
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||||||||| |   |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  7725415 tatattttaacataagaggagtggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 7725487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 11345359 - 11345439
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | |||| |||||||||||    
T  11345359 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtttaatttactct 11345439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 14602110 - 14602190
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  14602110 aggggagtgtatattttaacttaagaggggagggaagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 14602190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 33114644 - 33114600
Alignment:
Q  39 agtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||||||||| | |||||||||||  |||||||||||||||    
T  33114644 agtgtaattcaaacctctttaaggaaaaatgagtgtaatttactc 33114600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 33979288 - 33979363
Alignment:
Q  11 tatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaaga-gagtgtaatttactctta 86  Q
    ||||||||||||||||| ||  ||| | ||| |||||||||||| ||||| ||| ||| ||||||||||||||||||    
T  33979288 tatatattttaacataaaagaggaggagagtataattcaaacatctttaa-gaagagatgagtgtaatttactctta 33979363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 44950995 - 44951063
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttac 81  Q
    ||||||||||||||||||| |||   |||||| ||||||||| ||| |||| | | |||||||||||||    
T  44950995 tatattttaacataagaggggaggtgagtgtatttcaaacatctttgaggagaggggagtgtaatttac 44951063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 32114411 - 32114489
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||| ||||||||||||||||||||||||  |||||||||||| ||| ||| ||| || |||||||||||||||||||    
T  32114411 ggagtgtatattttaacataagaggagagagaagtgtaattcaagcatctttgagggaaggagagtgtaatttactctt 32114489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 14224498 - 14224571
Alignment:
Q  11 tatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||| |||| | |||||||||||| ||| ||| ||| || ||||||||||||||||||    
T  14224498 tatatattttaacataagagtagaggagagtgtaattcaagcatctttgagggaatgagagtgtaatttactct 14224571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 10702935 - 10703015
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| ||||  |||||||||||| ||| ||| ||| || ||||||||||||||||||    
T  10702935 agggaagtgtatattttaacataagaggggagagaagtgtaattcaagcatctttgagggaatgagagtgtaatttactct 10703015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 12693919 - 12693839
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||||||||  |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  12693919 aggggagtgtatattttaacataagaggagagagaagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 12693839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 21802605 - 21802685
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| ||   | ||||||||||||||||||    
T  21802605 aggggagtgtatattttaacataagaggggaggagagtgtaattcaagcatcttttagaggaggagagtgtaatttactct 21802685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 6936444 - 6936370
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||||||||||||||||||| ||| | ||||||||||||||||||| | ||||  || ||||||||||||||    
T  6936444 gagtgtatattttaacataagaggggaggagagtgtaattcaaacattttgagggaaggga-agtgtaatttactc 6936370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 7448891 - 7448970
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| || |  |||||||||||| ||||||| |||  | | |||||||||||||||    
T  7448891 aggggagtgtatattttaacataagaggggaaaggagtgtaattcaagcatttttgaggggaggggagtgtaatttactc 7448970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 25527803 - 25527720
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||| ||||||| ||| | |||||||||||| ||| ||| |||  | | |||||||||||||||||||    
T  25527803 aggggagtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactcttat 25527720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 3767750 - 3767828
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||| ||||||||||| ||||||| ||||  |||||||||||||||| ||| |||  | |||||| ||||||||||||    
T  3767750 ggagtgtatattttaacttaagaggggagatgagtgtaattcaaacatctttgaggggaggagagtataatttactctt 3767828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 4101129 - 4101204
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||||||||||||||||||| |   |||||||||||||||||| ||||||   | |||||||||||||||||||    
T  4101129 gagtgtatattttaacataagaggggg--atagtgtaattcaaacatctttaagcggaggagagtgtaatttactctt 4101204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 33276409 - 33276490
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||| ||| ||| ||||||||||| ||||||||  |||||||||||| || |||| |||||| |||||| |||||||||||||    
T  33276409 agggaagtgtatgttttaacataaaaggagagatgagtgtaattcaagca-ttttgaggaaaggagagtataatttactctta 33276490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 32522504 - 32522585
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| ||||||||||||||||||  ||||  |||||||||||||||| ||||| |  | || ||||||||||||||||    
T  32522504 agggaagtgtatattttaacataagagatgagatgagtgtaattcaaacatctttaaagggaggatagtgtaatttactctt 32522585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 2522742 - 2522659
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| |||||||||| |||||||| ||| | |||||||||||| ||| ||  |||  | | |||||||||||||||||||    
T  2522742 aggggagtgtatattttaatataagaggggaggagagtgtaattcaagcatattagaggggaggggagtgtaatttactcttat 2522659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 11722047 - 11722117
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaa-ggaaaagagagtgtaatttactc 83  Q
    ||||| ||||| |||||| |||||  |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  11722047 tatatcttaacttaagagaagagatgagtgtaattcaaacatttttaagggaagaga-agtgtaatttactc 11722117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 12767016 - 12766941
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| |||||||||||||| |||| |||   |||||||||||| ||| |||||||  | |||||||||||||||||    
T  12767016 gagtgtatattttaacataggaggggaggggagtgtaattcaagcatctttaaggggaggagagtgtaatttactc 12766941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 17336903 - 17336824
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| |||||||||||||||||||||||| | |  |||||| ||||||||| ||| ||  || | |||||||||||||||    
T  17336903 agggaagtatatattttaacataagaggaaaaatgagtgtagttcaaacatatttgagagaacgggagtgtaatttactc 17336824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 4126492 - 4126567
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||||||||||||||||||  | | |||||||||||||||||| |||||    | |||||||||||||||||||    
T  4126492 gagtgtatattttaacataagag--ggggatagtgtaattcaaacatctttaaacggaggagagtgtaatttactctt 4126567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 10702344 - 10702262
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  |   ||||||||||||||||||    
T  10702344 aggggagtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgaggggagatgagtgtaatttactctta 10702262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 24619981 - 24619923
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaagg 62  Q
    |||| ||| |||||||||||||||| || |||| ||||||||||||| ||| |||||||    
T  24619981 agggaagtgtatattttaacataagtggggagactagtgtaattcaagcatctttaagg 24619923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14306865 - 14306780
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatta 89  Q
    |||| ||| ||||||||||||||||||| ||| | | |||||||||| ||| ||| | |  | | |||||||||||||||||||||    
T  14306865 agggaagtgtatattttaacataagaggggaggagaatgtaattcaagcatctttgaagggaggggagtgtaatttactcttatta 14306780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14313265 - 14313180
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatta 89  Q
    |||| ||| ||||||||||||||| ||| ||||  | |||||||||| ||| ||| |||  | | |||||||||||||||||||||    
T  14313265 agggaagtgtatattttaacataaaaggggagaggaatgtaattcaagcatctttgaggggaggggagtgtaatttactcttatta 14313180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 34250127 - 34250078
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaagg 62  Q
    ||||||||||||||| ||| ||||  |||||||||||||||| |||||||    
T  34250127 tatattttaacataataggggagatgagtgtaattcaaacatctttaagg 34250078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 11522873 - 11522793
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  11522873 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 11522793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 12026198 - 12026278
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| ||   | | ||||||||||||||||    
T  12026198 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagaggaggggagtgtaatttactct 12026278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 14313850 - 14313930
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  14313850 aggggattgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggatgggagtgtaatttactct 14313930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 22022275 - 22022355
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| | | |||  | | ||||||||||||||||    
T  22022275 aggggagtgtatattttaacataagaggggatgagagtgtaattcaagcatctctgagggcaggggagtgtaatttactct 22022355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 33950299 - 33950219
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| |||||||||| |||||||| ||| | ||||| |||||| ||| ||| |||  | | ||||||||||||||||    
T  33950299 aggggagtgtatattttaaaataagaggggaggagagtgtgattcaagcatctttgaggggaggggagtgtaatttactct 33950219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 34794532 - 34794603
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacat-ttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||| |||   |||||||||||| ||| ||| |||||| || ||||||||||||||||    
T  34794532 tatattttaacataagaggggaggggagtgtaattcaagcatctttaaaggaagag-gagtgtaatttactct 34794603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 82
Target Start/End: Original strand, 36848507 - 36848576
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    ||||||||||||||||||||||||| |||||||||||| ||| |||||||| | | ||||||||||||||    
T  36848507 tatattttaacataagaggagagaagagtgtaattcaagcatctttaaggagaggggagtgtaatttact 36848576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 19156076 - 19156160
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    |||| ||| ||||||||||||||||||| ||||  |||||||||||||||| ||| |||| | ||||||||| ||||||||||||    
T  19156076 agggaagtgtatattttaacataagaggggagatgagtgtaattcaaacatctttgaggagaggagagtgtagtttactcttatt 19156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 20755475 - 20755559
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    |||| ||| ||||||||||||||||||| ||||  |||||||||||||||| ||| |||| | ||||||||| ||||||||||||    
T  20755475 agggaagtgtatattttaacataagaggggagatgagtgtaattcaaacatctttgaggagaggagagtgtagtttactcttatt 20755559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 32867903 - 32867983
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||| ||| ||| ||| |||| |||||||||||||||||    
T  32867903 aggggagtgtatattttaacataagaggggagaggagtgtaattcaagcatctttgagg-aaagggagtgtaatttactctt 32867983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 10412556 - 10412636
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| ||| | |||||||||||| ||| ||||||| || | ||||||||||||||||    
T  10412556 agggaagtgtatattttaacataagaggggaggagagtgtaattcaagcatatttaagggaaggggagtgtaatttactct 10412636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 27144842 - 27144922
Alignment:
Q  5 ggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||| ||||||||||||||||| ||||||| |||||||||||| ||| ||||| |  | ||| |||||||||||||||    
T  27144842 ggggagtgtatattttaacataagaagagagaagagtgtaattcaagcatctttaaagggaggagggtgtaatttactctt 27144922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 3341445 - 3341520
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||||||||||||||||||||||| | |||||||||||| ||| ||| ||| |||  |||||||||||||||    
T  3341445 gagtgtatattttaacataagaggagaggagagtgtaattcaagcatctttgagggaaatggagtgtaatttactc 3341520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 40344446 - 40344517
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||| ||| | |||||||||||||||| ||||||   ||| ||||||||||||||||    
T  40344446 tatattttaacataagaggggaggagagtgtaattcaaacatctttaagaggaagggagtgtaatttactct 40344517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 40189072 - 40189145
Alignment:
Q  11 tatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||||||||||| | |||||||||| ||| ||| | |  | ||||||||||||||||||    
T  40189072 tatatattttaacataagaggagagaagactgtaattcaagcatctttgaagggatgagagtgtaatttactct 40189145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 25607612 - 25607692
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||||||| ||||||| ||   ||||||||||||||||    
T  25607612 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaaacatctttaagggaagaggagtgtaatttactct 25607692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 2790154 - 2790075
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||| | ||||||||||| ||||||| |||   |||||||||||||||| ||| |||| | |||||||||||||||||    
T  2790154 aggggaatgtatattttaacttaagaggggaggggagtgtaattcaaacatctttgaggagaggagagtgtaatttactc 2790075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 33869267 - 33869216
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatt 55  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||| ||||    
T  33869267 aggggagtgtatattttaacataagaggagaggagagtgtaattcaagcatt 33869216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 10412665 - 10412735
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| ||||  | |||||||||||| | ||| |||  |||||||||||||||||||    
T  10412665 tatattttaacataagaggggagagaattgtaattcaaacttctttcaggggaagagagtgtaatttactc 10412735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 38670060 - 38669990
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||| ||||||| ||| | |||||||||||| ||| |||||||| | | |||||||||||||||    
T  38670060 tatattttaacttaagaggggaggagagtgtaattcaagcatctttaaggagaggggagtgtaatttactc 38669990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 88
Target Start/End: Complemental strand, 22711705 - 22711624
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    ||||| ||||||||||||||||||| ||| | ||||||| |||| ||| ||| ||| ||   ||||||||||||||||||||    
T  22711705 ggagtgtatattttaacataagaggggaggagagtgtaaatcaagcatctttgagggaagaggagtgtaatttactcttatt 22711624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 6184725 - 6184646
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| ||| | |||||||||||||||| ||| |||  | | ||||||||||||||||    
T  6184725 aggggagtgtatattttaacttaagagg-gaggagagtgtaattcaaacatctttgaggggaggggagtgtaatttactct 6184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 14753878 - 14753958
Alignment:
Q  5 ggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||| |||||||||||||||||||||||   ||||||||||||  || ||| | |  | |||||||||||||||||||    
T  14753878 ggggagtgtatattttaacataagaggagagtggagtgtaattcaagtatctttgaagggaggagagtgtaatttactctt 14753958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 25956 - 26027
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||| ||||||| |||   |||||||||||||||| ||| ||| || | ||||||||||||||||    
T  25956 tatattttaacttaagaggggaggtgagtgtaattcaaacatctttgagggaaggggagtgtaatttactct 26027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 84
Target Start/End: Complemental strand, 28308066 - 28307991
Alignment:
Q  9 agtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||||||||||   |||||||||||| ||| ||| ||  ||  ||||||| |||||||||    
T  28308066 agtatatattttaacataagaggagaggggagtgtaattcaagcatctttgagagaattagagtgttatttactct 28307991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 29823404 - 29823325
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||| ||||||| ||| | |||||||||||||||| ||| |||  | | || ||||||||||||    
T  29823404 aggggagtgtatattttaacttaagaggggaggagagtgtaattcaaacatctttgaggggaggggaatgtaatttactc 29823325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 32388148 - 32388227
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||| | |||| ||||||||||||    
T  32388148 agggaagtgtatattttaacataagaggggagtggagtgtaattcaagcatctttgaggagaggagaatgtaatttactc 32388227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 42813588 - 42813659
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||  |||   |||||||||||| ||| ||| ||| || ||||||||||||||||||    
T  42813588 tatattttaacataagagaggaggggagtgtaattcaagcatctttgagggaatgagagtgtaatttactct 42813659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 48982539 - 48982618
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||| | | |||| ||||||||||    
T  48982539 aggggagtgtatattttaacataagaggggagggaagtgtaattcaagcatatttgaggagaggggagtataatttactc 48982618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 20261582 - 20261656
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatt 78  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| ||| |||  | ||||||||||||    
T  20261582 aggggagtgtatattttaacataagaggggatgagagtgtaattcaagcatctttgaggggatgagagtgtaatt 20261656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 28308671 - 28308717
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||    
T  28308671 aggggagtgtatattttaacataagaggagatgagagtgtaattcaa 28308717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 29103595 - 29103515
Alignment:
Q  4 aggggagtatatattttaacataagagg--agagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||| |||||||||||||||||||  || | | |||||||| ||||||||||||||| || | |||||||||||||||    
T  29103595 agggaagtgtatattttaacataagagggaagggga-agtgtaatgcaaacatttttaagggaaggtgagtgtaatttactc 29103515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 36687369 - 36687292
Alignment:
Q  5 ggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||| ||||||||||||||||||| |||   |||||||||||| ||| |||||||  | | |||||||||||||||    
T  36687369 ggggagtgtatattttaacataagaggggagggaagtgtaattcaagcatctttaagg-gaggggagtgtaatttactc 36687292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 36890087 - 36890161
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||| ||||| |||||| |||||| ||||| |||||||||||| ||| ||| | | || ||||||||||||||||    
T  36890087 gagtgtatatattaacagaagaggggagaagagtgtaattcaagcatctttgaaggaaggagagtgtaatttact 36890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 38790750 - 38790820
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||||| ||||||||||||   |||||||||||||||| ||| |||  | |||| ||||||||||||    
T  38790750 tatattttaatataagaggagaggggagtgtaattcaaacatctttgaggggaggagaatgtaatttactc 38790820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 40401554 - 40401632
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| | |  | ||||||||||||||||||    
T  40401554 gggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaagggaggagagtgtaatttactct 40401632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 24679892 - 24679973
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaagga-aaagagagtgtaatttactcttatt 88  Q
    |||| ||||||||||||||||||| ||||  | |||||||||||||| ||| ||||  | |||| |||||||||||| ||||    
T  24679892 gagtgtatattttaacataagaggggagagaaatgtaattcaaacatctttgaggaggaggagaatgtaatttactcatatt 24679973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 31388141 - 31388210
Alignment:
Q  16 attttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||| | |||||| |||||||||| | | | | ||| || |||||||||||||||||||    
T  31388141 attttaacataagagaaaagaataatgtaattcaagcttctcttagggaaggagagtgtaatttactctt 31388210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 5228639 - 5228719
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||| ||| ||| | |||||||||||| ||| ||| | |  | | ||||||||||||||||    
T  5228639 aggggagtgtatattttaacataaaaggggaggagagtgtaattcaagcatctttgaagggaggggagtgtaatttactct 5228719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 8535437 - 8535513
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||||| ||| |||   |||||||||||||||| ||| | |  | | |||||||||||||||    
T  8535437 ggagtatatattttaacataaaaggggaggggagtgtaattcaaacatctttgacgggaggggagtgtaatttactc 8535513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 11639966 - 11639890
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  11639966 gagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 11639890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 16425411 - 16425363
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaac 52  Q
    |||| ||| ||||||||||||||||||| ||||  ||||||||||||||    
T  16425411 agggaagtgtatattttaacataagaggggagaggagtgtaattcaaac 16425363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 27144255 - 27144175
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   ||||||||| || ||| ||| |||  | | ||||||||||||||||    
T  27144255 aggggagtgtatattttaacataagaggggaggggagtgtaatttaagcatctttgaggggaggggagtgtaatttactct 27144175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 29615590 - 29615510
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| | ||||||||||||||||||| ||| | |||||||||||| ||| ||| ||| || |  || ||||||||||||    
T  29615590 aggggaatgtatattttaacataagaggggaggagagtgtaattcaagcatctttgagggaagggtagggtaatttactct 29615510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Complemental strand, 40400973 - 40400897
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||| ||||||||||||||||||| ||  | |||||||||||| ||| ||| ||| || |  ||||||||||||||    
T  40400973 ggagtgtatattttaacataagaggggatgagagtgtaattcaagcatctttgagggaagggaagtgtaatttactc 40400897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 46682748 - 46682668
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| |||||||||||||||||||||||   |||||||||||||||| ||| ||| || | ||||||||||||||||    
T  46682748 aggggagtgtatattttaacataagaggagagcgaagtgtaattcaaacatctttgagggaaggggagtgtaatttactct 46682668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 18407202 - 18407285
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||| | ||||||||||||||||||| ||| | |||||||||||||||| |||||||  | | |||||||||||||||||||    
T  18407202 aggggaatgtatattttaacataagaggggaggagagtgtaattcaaacatctttaaggggaggggagtgtaatttactcttat 18407285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 43504462 - 43504535
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    ||||| ||||||||||||||||||| ||| | ||| |||||||| ||||||||||| ||  |||||||||||||    
T  43504462 ggagtgtatattttaacataagaggggaggagagtataattcaagcatttttaagggaagaagagtgtaattta 43504535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 36605405 - 36605481
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||||||||||||||||||| |||   |||||||||||||||| ||| |||  | ||||||||||||||||||    
T  36605405 gagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggaggagagtgtaatttactct 36605481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 4007617 - 4007542
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    ||||||||||||||||||| ||| | ||||||||| || ||| |||||||| | |  |||||||||||||||||||    
T  4007617 tatattttaacataagaggggaggagagtgtaatttaagcatctttaaggagagggaagtgtaatttactcttatt 4007542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 80
Target Start/End: Original strand, 28045154 - 28045221
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||  ||| || |||||| |||||||    
T  28045154 tatattttaacataagaggagagggtagtgtaattcaaacatcttagagggaacgagagtataattta 28045221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 36512066 - 36512109
Alignment:
Q  11 tatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  36512066 tatatattttaacataagaggagagatgagtgtaattcaaacat 36512109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 19071783 - 19071706
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| ||||||||||||||||||| ||| | |||||||||||||||| ||| |||  ||| |||| |||||||||||    
T  19071783 gggagtgtatattttaacataagaggggaggagagtgtaattcaaacatctttgagg-gaagggagtataatttactct 19071706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 19119673 - 19119596
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| ||||||||||||||||||| ||| | |||||||||||||||| ||| |||  ||| |||| |||||||||||    
T  19119673 gggagtgtatattttaacataagaggggaggagagtgtaattcaaacatctttgagg-gaagggagtataatttactct 19119596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 16536445 - 16536364
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  16536445 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 16536364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 27226335 - 27226380
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacattttt 58  Q
    |||||||||||||||||||||||   ||||||||||||||||||||    
T  27226335 tatattttaacataagaggagaggggagtgtaattcaaacattttt 27226380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 33475708 - 33475639
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    ||||||||||||||||||||||||  ||||||||||||| || ||| ||   | ||||||||||||||||    
T  33475708 tatattttaacataagaggagagataagtgtaattcaaatatctttgagaggaggagagtgtaatttact 33475639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 51362487 - 51362567
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||| ||| ||| | |||||||||||| ||| ||| |||  ||| |||||||||||||||||    
T  51362487 aggggagtgtatattttaacataaaaggggaggaaagtgtaattcaagcatctttgagg-gaagggagtgtaatttactctt 51362567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 8061099 - 8061020
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||  ||| | |||||||||||| ||| |||||||  | | ||||||||||||||||    
T  8061099 aggggagtgtatattttaacataagagaggaggagagtgtaattcaagcatctttaagg-gaggggagtgtaatttactct 8061020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 17109378 - 17109299
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||| ||||||  ||||||||||||| || ||| |||  | | ||||||||||||||||    
T  17109378 aggggagtgtatattttaacataaga-gagagaggagtgtaattcaaatatctttgaggggaggggagtgtaatttactct 17109299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 38011854 - 38011934
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||  |||   |||||||||||| ||| ||||||| || | ||||||||||||||||    
T  38011854 aggggagtgtatattttaacttaagagtggaggggagtgtaattcaagcatctttaagggaaggggagtgtaatttactct 38011934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 45738073 - 45737993
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  45738073 agggaagtgtatattttaacataagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 45737993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 47216126 - 47216051
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| |||||||||||||||||||| ||   |||||||||||||||| ||| | | ||||| |||||||||||||||    
T  47216126 gagtgtatattttaacataagaggatagggaagtgtaattcaaacatctttgaag-aaagaaagtgtaatttactct 47216051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 41321586 - 41321507
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||| ||||||| ||| | |||||||||||| ||| ||| |||  | | |||||||||||||||    
T  41321586 aggggagtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactc 41321507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 43319989 - 43319910
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||| | ||||||||||||||| |||||||   |||||||||||||||| ||| |||| | |  ||||||||||||||    
T  43319989 aggggaatgtatattttaacataaaaggagaggggagtgtaattcaaacatctttgaggagagggaagtgtaatttactc 43319910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 47291642 - 47291567
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||||||||||| ||| |||| || | ||||||||| |||||| ||||||  || | |||||||||||||||    
T  47291642 gagtatatattttaacttaaaaggaaaggagagtgtaatttaaacatctttaagagaaggggagtgtaatttactc 47291567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 47553210 - 47553131
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||| | ||||||||||||||||||| ||| | ||||||| |||||||||||  | | || | |||||||||||||||    
T  47553210 aggggaatgtatattttaacataagaggggaggagagtgtaactcaaacattttagaaggaaggggagtgtaatttactc 47553131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 13573572 - 13573491
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||| || ||||| |||||||||||||  || | ||||||||| || ||| |||||||  | |||||||||||||||||||    
T  13573572 aggggcgtgtatatcttaacataagagggaaggagagtgtaatttaagcatatttaaggggatgagagtgtaatttactctt 13573491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 33126251 - 33126178
Alignment:
Q  11 tatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||| ||||   | |||||||||||||| ||| |||| | | | ||||||||||||||    
T  33126251 tatatattttaacataagagaagaggggaatgtaattcaaacatctttgaggagaggggggtgtaatttactct 33126178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 36604800 - 36604719
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| |||||||||||||||||||  |||  |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  36604800 agggaagtgtatattttaacataagagggaagaggagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 36604719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 41322205 - 41322278
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | ||||||||||||||||||||    
T  41322205 tatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactctta 41322278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 41575247 - 41575166
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||  ||||||||||||||||||  |||  |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  41575247 aggggagtgcatattttaacataagagggaagaggagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 41575166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 47553851 - 47553900
Alignment:
Q  39 agtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    |||||||||||||||| |||||||  | | ||||||||||||||||||||    
T  47553851 agtgtaattcaaacatctttaaggggaggggagtgtaatttactcttatt 47553900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 794748 - 794828
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| ||| | ||||||||| || ||| ||| | | || | || |||||||||||||    
T  794748 aggggagtgtatattttaacataagaggggaggagagtgtaattaaatcatctttgatggaaggggattgtaatttactct 794828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 15357007 - 15356927
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||| ||| || ||||  | | ||||||||||||||||    
T  15357007 aggggattgtatattttaacataagaggggagggaagtgtaattcaaccatcttaaaggggaggggagtgtaatttactct 15356927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 29510479 - 29510535
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaa 60  Q
    |||||||| |||||||||||||||||||  ||   |||||||||||||||| |||||    
T  29510479 aggggagtgtatattttaacataagagggaaggggagtgtaattcaaacatctttaa 29510535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 33113178 - 33113106
Alignment:
Q  12 atatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||| ||||||| |||   |||||||||||||||||||| |||    | ||||||||||||||||    
T  33113178 atatattttaacttaagaggggaggggagtgtaattcaaacatttttgaggggtggggagtgtaatttactct 33113106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 42830602 - 42830530
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||||||| | |   |||||||||||||||| ||| |||  | |||||||||||| ||||||    
T  42830602 tatattttaacataagaggggcggggagtgtaattcaaacatctttgaggggaggagagtgtaattcactctt 42830530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 96
Target Start/End: Complemental strand, 50143458 - 50143366
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttattaatttgat 96  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||||||| | | ||| ||  | |||||||||||||| || || ||||||    
T  50143458 aggggaatgtatattttaacataagaggggaggggagtgtaattcaaacatctctgagggaagaatagtgtaatttactcatagtattttgat 50143366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 17729585 - 17729507
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||||| | ||||||||||||||||||||||||  |||||||||||||||| ||| |||  | ||||||||||||||||    
T  17729585 aggggaatgtatattttaacataagaggagagagaagtgtaattcaaacatatttgaggggaggagagtgtaatttact 17729507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 48372489 - 48372410
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||||||||||||||||||||||| |||   | |||||||||||||| ||| |||  | |||||||||||||||||    
T  48372489 aggggagtatatattttaacataagaggggaggcgaatgtaattcaaacatctttgaggggaggagagtgtaatttactc 48372410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 55140021 - 55140091
Alignment:
Q  14 atattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||||||||| |  ||||||||||||||| |||| |||  | |||||||||||||||||||    
T  55140021 atattttaacataagaggagatatgagtgtaattcaaaca-ttttgaggggaggagagtgtaatttactctt 55140091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 7478744 - 7478665
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||| | ||||||||||||| ||||||||| |  ||||||||||||||| ||| |||| | |||| ||||||||||||||    
T  7478744 aggggaatgtatattttaacatgagaggagagga--gtgtaattcaaacatctttgaggagaggagaatgtaatttactctt 7478665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 17722824 - 17722742
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||||| |  | | ||||||||||||||||||    
T  17722824 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttaaagggaggggagtgtaatttactctta 17722742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35667567 - 35667645
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| |||  | | ||||||||||||||    
T  35667567 aggggagtgtatattttaacataagaggggaggaaagtgtaattcaagcatctttgaggggaggggagtgtaatttact 35667645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 13771792 - 13771711
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  13771792 aggggagtgtatattttaacataagaggggatgaaagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 13771711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 16960279 - 16960198
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| | || | | |||||||||||||||||    
T  16960279 aggggagtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgaagagaggggagtgtaatttactctt 16960198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 36687321 - 36687244
Alignment:
Q  9 agtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaaga-gagtgtaatttactctt 85  Q
    ||||||||||||||||||||||  ||||  |||||||||||| ||| ||| ||| ||| | |||||||||||||||||    
T  36687321 agtatatattttaacataagagaggagagaagtgtaattcaagcatctttgagggaaataggagtgtaatttactctt 36687244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 26809047 - 26809127
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||| ||| | |||   |||||||||||||||| ||| ||| || ||||||||||||||||||    
T  26809047 agggaagtgtatattttaacatgagatgtgaggggagtgtaattcaaacatctttgagggaaggagagtgtaatttactct 26809127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Original strand, 33047232 - 33047312
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||||| ||||||||||||||||||| |||   |||||||||||||||  |||||||  | | || |||||||||||||||    
T  33047232 gggagtgtatattttaacataagaggggaggggagtgtaattcaaacaactttaaggggaggggaatgtaatttactctta 33047312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Original strand, 45847768 - 45847852
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatt 88  Q
    |||||||| ||||||||||||||||||  ||||  | |||||||||| ||| |||||||  | | || |||||||||||||||||    
T  45847768 aggggagtgtatattttaacataagagaggagaggattgtaattcaagcatctttaaggtgaggggaatgtaatttactcttatt 45847852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 47030483 - 47030563
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| ||| | |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  47030483 aggggagtgtatattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 47030563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 6232486 - 6232415
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||| |||||||||||   |||||||||||| ||| ||| |||  | ||||||||||||||||||    
T  6232486 tatattttaacttaagaggagaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactct 6232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 8138993 - 8139076
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| |||||||||||||| |||| |||   | |||||||||| ||| ||||| | || | |||||||||||||||||||    
T  8138993 aggggagtgtatattttaacatatgaggggaggggattgtaattcaagcatctttaaaggaaggggagtgtaatttactcttat 8139076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 13482257 - 13482178
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| |||  | |  ||||||||||||||    
T  13482257 aggggagtgtatattttaacataagaggggaggagagtgtaattcaagcatctttgaggggagggaagtgtaatttactc 13482178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 13772392 - 13772463
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||  ||  | |||||||||||||||| ||||||  || | ||||||||||||||||    
T  13772392 tatattttaacataagagaggatgagagtgtaattcaaacatctttaagagaaggggagtgtaatttactct 13772463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 17730181 - 17730260
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||| ||||||||||||||| ||||||| | |||||||||||| ||| ||| |||  | | |||||||||||||||    
T  17730181 agggtagtgtatattttaacataaaaggagaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactc 17730260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 25008292 - 25008218
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttac 81  Q
    |||||| |||||||||||||| |||||||  | |||||||||||||||||||| |||| |   |||||||||||||    
T  25008292 gggagtgtatattttaacata-gaggagaagagagtgtaattcaaacattttttaggagagtggagtgtaatttac 25008218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 41919908 - 41919955
Alignment:
Q  3 taggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    ||||||||| ||||||||||||||||||  ||||| ||||||||||||    
T  41919908 taggggagtgtatattttaacataagagaggagaagagtgtaattcaa 41919955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 19313419 - 19313341
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| ||| |||  | | ||||||||||||||    
T  19313419 aggggagtgtatattttaacataagaggggatgagagtgtaattcaagcatctttgaggggaggggagtgtaatttact 19313341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 30192583 - 30192533
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    |||| ||| ||||||||||||||||||| ||| | ||||||||||||||||    
T  30192583 agggaagtgtatattttaacataagaggggaggagagtgtaattcaaacat 30192533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 35667382 - 35667460
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  ||| ||||||||||||||    
T  35667382 agggaagtgtatattttaacataagaggggagggaagtgtaattcaagcatctttgaggggaagggagtgtaatttact 35667460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 37708849 - 37708803
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  37708849 aggggagtgtatattttaacataagaggggagaggagtgtaattcaa 37708803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 47930624 - 47930555
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||| |||||| | ||||||||||| ||| ||| ||| | || |||||||||||||||    
T  47930624 tatattttaacataagaagagagagttgtgtaattcaatcatctttgagggagag-gagtgtaatttactc 47930555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 55069524 - 55069594
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||||||||  | | |||||||||||| ||  ||| || | |||||||||||||||    
T  55069524 tatattttaacataagaggagagagaaatataattcaaacatcttagagggaaggggagtgtaatttactc 55069594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 721984 - 722061
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||||||||||||||||||| ||||  ||||||||||||  || ||| |||  | | |||||||||||||||||    
T  721984 gagtgtatattttaacataagaggggagaggagtgtaattcaagtatctttgaggggaggggagtgtaatttactctt 722061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 32448941 - 32449022
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| ||||||||||||||||||| |||   ||||||||||||  || ||| |||| | | |||||||||||||||||    
T  32448941 agggaagtgtatattttaacataagaggggagtggagtgtaattcaagtatctttgaggagaggtgagtgtaatttactctt 32449022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 47931234 - 47931279
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaac 52  Q
    ||||| ||||||||||||||||||| ||||  ||||||||||||||    
T  47931234 ggagtgtatattttaacataagaggggagatgagtgtaattcaaac 47931279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 8192991 - 8193071
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  8192991 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 8193071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 16192316 - 16192396
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||  |||   |||||||||||| ||| ||| || | | | ||||||||||||||||    
T  16192316 aggggagtgtatattttaacataagagaggaggggagtgtaattcaagcatctttcagtagaggggagtgtaatttactct 16192396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 26705670 - 26705750
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||  |||   |||||||||||| ||| ||| | |  ||| ||||||||||||||||    
T  26705670 aggggagtgtatattttaacataagagaggaggggagtgtaattcaagcatctttgaagggaagggagtgtaatttactct 26705750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 36687884 - 36687960
Alignment:
Q  9 agtatatattttaacataagaggagagaatagtgtaattcaaacat-ttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||||||||||||||||   ||||  |||||||||||| ||| ||| | |||||  |||||||||||||||||    
T  36687884 agtatatattttaacataagataggagagaagtgtaattcaagcatctttgagggaaataagagtgtaatttactct 36687960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 55068917 - 55068837
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| ||   | | ||||||||||||||||    
T  55068917 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgagaggaggggagtgtaatttactct 55068837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 55139422 - 55139382
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaatt 47  Q
    ||||| ||||||||||||||||||||||||  |||||||||    
T  55139422 ggagtgtatattttaacataagaggagagaggagtgtaatt 55139382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Original strand, 56310076 - 56310148
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||||||  ||| | |||||||||||| ||| ||| |||| |   |||||||||||||||||    
T  56310076 tatattttaacataagagaggaggagagtgtaattcaagcatctttgaggagagatgagtgtaatttactctt 56310148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 31846523 - 31846442
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| ||| || |||||||||||||||||||    
T  31846523 aggggagtgtatattttaacataagaggggagggaagtgtaattcaatcatcttttagggaaggagagtgtaatttactctt 31846442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 14093557 - 14093474
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||| ||||||  ||||  ||||||||| || ||| |||||||  |||||||||||||||||||||||    
T  14093557 aggggagtgtatattttaacttaagagatgagaggagtgtaatttaagcatctttaaggggaagagagtgtaatttactcttat 14093474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 36016165 - 36016083
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||||||| ||||||||||||||||| | ||| | | |||||||||| |||||||||   || ||||||||||||||||||||    
T  36016165 aggggagtgtatattttaacataagaagggaggaaaatgtaattcaagcatttttaaaagaaggagagtgtaatttactctta 36016083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 40791122 - 40791041
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| ||||||||||||||||||| ||| | ||| |||||||||||| ||| |||  | |||||||||||||||||||    
T  40791122 agggtagtgtatattttaacataagaggggaggagagtataattcaaacatctttgaggggatgagagtgtaatttactctt 40791041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 29459259 - 29459338
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||  ||||||||||||||||||||||   |||||||||||| ||| ||| |||| | | |||||||||||||||    
T  29459259 aggggagtggatattttaacataagaggagaggggagtgtaattcaagcatctttgaggataggggagtgtaatttactc 29459338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 14879587 - 14879517
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| ||| | |||||||||||||||| ||| |||  | | |||||||||||||||    
T  14879587 tatattttaacataagaggggaggagagtgtaattcaaacatctttgaggggaggggagtgtaatttactc 14879517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 41311746 - 41311666
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||| | ||||||||||||||| ||| ||| | ||||||||||||| | ||||||||| | | |||||||||||||||||    
T  41311746 aggggaatgtatattttaacataaaaggggagtagagtgtaattcaaata-ttttaaggagaggggagtgtaatttactctt 41311666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3075211 - 3075127
Alignment:
Q  1 gataggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||| | ||||||||||||||||||| |||  ||||||||||||| ||| ||| |||  | |  ||||||||||||||||    
T  3075211 gataggggaatgtatattttaacataagaggggagggtagtgtaattcaagcatctttgaggggagggaagtgtaatttactctt 3075127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 6099405 - 6099334
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||| |||||||   |||||||||||| ||| ||| |||||| || ||||||||||||||||    
T  6099405 tatattttaacataaaaggagagggaagtgtaattcaatcatctttgaggaaagga-agtgtaatttactctt 6099334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 6099477 - 6099553
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||||| | ||||||||||||||||||||||| | |||||||||||| ||| ||| |||  | | ||||||||||||    
T  6099477 aggggattgtatattttaacataagaggagaggagagtgtaattcaagcatctttgaggggaggtgagtgtaattta 6099553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 13421517 - 13421437
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||||||  | |||||||||||  ||||||| |||  | || | |||||||||||||    
T  13421517 aggggagtgtatattttaacataagaggagatgagagtgtaattcatgcatttttgaggggaggaaaatgtaatttactct 13421437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 17564744 - 17564664
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||||||| ||| ||   | | ||||||||||||||||    
T  17564744 aggggagtgtatattttaacataagaggggagggaagtgtaattcaaacatctttgagaggaggggagtgtaatttactct 17564664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 3075380 - 3075302
Alignment:
Q  6 gggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  3075380 gggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 3075302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 3075967 - 3076045
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||||||| |||||||||| ||||||||||||   |||||||||||| ||| ||| ||   | ||||||||||||||||    
T  3075967 aggggagtgtatattttaatataagaggagaggggagtgtaattcaagcatctttgagaggaggagagtgtaatttact 3076045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 86
Target Start/End: Original strand, 12336293 - 12336375
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    |||| ||| |||||||||||||||||||||||   ||||| |||||| ||| ||| ||| || | |||||||||| |||||||    
T  12336293 agggaagtgtatattttaacataagaggagagggaagtgttattcaaccatgtttgagggaaggggagtgtaattaactctta 12336375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 17565342 - 17565420
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||| ||||||||||||||||||| ||||  ||||||||| || ||| ||| ||| || | |||| ||||||||||||    
T  17565342 ggagtgtatattttaacataagaggggagaggagtgtaattgaagcatctttgagggaaggggagtataatttactctt 17565420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 40791756 - 40791802
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||    
T  40791756 aggggagtgtatattttaacataagaggggagaggagtgtaattcaa 40791802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 43764150 - 43764104
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    |||| ||||||||||||||||||| ||||  ||||||||||||||||    
T  43764150 gagtgtatattttaacataagaggggagagaagtgtaattcaaacat 43764104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 44746840 - 44746886
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||||||||  ||||| ||||||    
T  44746840 aggggagtgtatattttaacataagaggagagatgagtgtgattcaa 44746886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 85
Target Start/End: Original strand, 8628056 - 8628133
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||||||||||||||||||   |||| |||||||||||| ||| ||| | |  | |||||||||||||||||||    
T  8628056 gagtgtatattttaacataagagagaagaaaagtgtaattcaagcatctttgaagggaggagagtgtaatttactctt 8628133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 13573789 - 13573858
Alignment:
Q  14 atattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||| |||||||| ||  | |||||||||||||||| ||| |  ||| |||||||||||||||||    
T  13573789 atattttaatataagaggggacgagagtgtaattcaaacatcttttaacaaatgagagtgtaatttactc 13573858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 39998446 - 39998365
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| | ||||||||| ||||||| ||| | |||||||||||| ||| ||| |||  | | |||||||||||||||||    
T  39998446 aggggagtgtgtattttaacttaagaggggaggagagtgtaattcaagcatctttgaggggaggggagtgtaatttactctt 39998365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 60
Target Start/End: Complemental strand, 8437973 - 8437917
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaa 60  Q
    |||||||| ||||||||||||||||||  |||   |||||||||||||||| |||||    
T  8437973 aggggagtgtatattttaacataagagaggagtggagtgtaattcaaacatctttaa 8437917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 22934365 - 22934285
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  22934365 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 22934285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 31739585 - 31739509
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaattta 80  Q
    |||||||| ||||||||||||||||||| ||  | |||||||||||| ||| ||| |||    ||||||||||||||    
T  31739585 aggggagtgtatattttaacataagaggggatgacagtgtaattcaagcatcttttaggggtggagagtgtaattta 31739509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 32904220 - 32904300
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||| ||| ||| | |  | ||||||||||||||||||    
T  32904220 agggaagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaagggatgagagtgtaatttactct 32904300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 32905328 - 32905408
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||| | | ||| | |||||||||||| ||| ||| |||  | ||||||||||||||||||    
T  32905328 agggaagtgtatattttaacataaaaagggaggagagtgtaattcaagcatctttgaggggacgagagtgtaatttactct 32905408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 41312381 - 41312461
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||| | ||||||||||||||||||| |||   |||||||||||| ||| ||||| |  |  |||||||||||||||||    
T  41312381 aggggaatgtatattttaacataagaggggaggggagtgtaattcaagcatctttaaagggagaagagtgtaatttactct 41312461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 2890 - 2973
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||| ||||||  ||||  ||||||||| || ||| |||||||  |||||||||||||||||||||||    
T  2890 aggggagtgtatattttaacttaagagatgagaggagtgtaatttaagcatctttaaggggaagagagtgtaatttactcttat 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 161331 - 161250
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||| || ||| |||||||  | | |||||||| ||||||||    
T  161331 aggggagtgtatattttaacataagaggggagaaaagtgtaatttaagcatatttaaggggatgtgagtgtaacttactctt 161250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 59334 - 59254
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||| ||| ||   | ||||||||||||||||||    
T  59334 aggggagtgtatattttaacataagaggggaggagagtgtaattcaagcatcttttagaggaggagagtgtaatttactct 59254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 14594143 - 14594063
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| ||||  | |||||||||||||| ||| |||  | ||||||||||||||||||    
T  14594143 agggaagtgtatattttaacataagaggggagatgattgtaattcaaacatctttgaggggaggagagtgtaatttactct 14594063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 19408613 - 19408533
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  | ||||||||||||||||||    
T  19408613 aggggagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttgaggggaggagagtgtaatttactct 19408533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 3933988 - 3934058
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| |||   |||||||||||| ||| ||| |||  |||||||||||||||||||    
T  3933988 tatattttaacataagaggggagggaagtgtaattcaagcatctttgaggggaagagagtgtaatttactc 3934058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 4877375 - 4877456
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||||| ||||||||||||||||||| ||| | |||||||||||| ||  ||| |||  | | |||||||||||||||||    
T  4877375 aggggagtgtatattttaacataagaggggaggagagtgtaattcaagcaaatttgaggggatgggagtgtaatttactctt 4877456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 13280147 - 13280227
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||||||| ||| |||  | | ||||||||||||||||    
T  13280147 agggaagtgtatattttaacataagaggggagggcagtgtaattcaaacatctttgagggtaggggagtgtaatttactct 13280227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 22730481 - 22730429
Alignment:
Q  2 ataggggagtatatattttaacataagaggagagaatagtgtaattcaaacat 54  Q
    ||||||||||  | ||||||||||||||||||||  |||||||||||||||||    
T  22730481 ataggggagtggacattttaacataagaggagagggtagtgtaattcaaacat 22730429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 27979900 - 27979980
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||  ||| |  ||||||||||||||| ||| |||  | | ||||||||||||||||    
T  27979900 aggggagtgtatattttaacataagagatgaggagggtgtaattcaaacatctttgaggggaggggagtgtaatttactct 27979980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 36737449 - 36737529
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||| ||||||||||||||||||| |||   |||||||||||| ||| |||||||  | | ||||||||||||||||    
T  36737449 agggaagtgtatattttaacataagaggggaggggagtgtaattcaagcatctttaaggggaggggagtgtaatttactct 36737529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 17780416 - 17780341
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    |||| ||||||||||||||||||  |||| ||||||||||||| ||| ||| ||   |||| ||||||||||||||    
T  17780416 gagtgtatattttaacataagagaggagagtagtgtaattcaagcatctttgagaggaagaaagtgtaatttactc 17780341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Complemental strand, 8572764 - 8572694
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||  |||   |||||||||||| ||||||| |||  | |||||||||||||||||    
T  8572764 tatattttaacataagagatgaggggagtgtaattcaagcatttttgaggggaggagagtgtaatttactc 8572694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 14594752 - 14594822
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| ||||   ||||||||||| ||| ||| |||| | | |||||||||||||||    
T  14594752 tatattttaacataagaggggagaggtgtgtaattcaagcatctttgaggagaggtgagtgtaatttactc 14594822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 27301929 - 27301875
Alignment:
Q  9 agtatatattttaacataagaggagagaatagtgtaattcaaacatttttaagga 63  Q
    |||||||||||||| |||||| ||||||| |||||||||||| ||| ||| ||||    
T  27301929 agtatatattttaatataagacgagagaaaagtgtaattcaagcatatttgagga 27301875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 31476974 - 31477044
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||| |||   |||||||||||| ||| ||| |||| | | |||||||||||||||    
T  31476974 tatattttaacataagaggggaggggagtgtaattcaagcatctttgaggagaggggagtgtaatttactc 31477044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 32348507 - 32348584
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    ||||| ||||||||||||||||| |||||   |||||||||||| ||| ||||| | ||  || |||||||||||||||||    
T  32348507 ggagtgtatattttaacataagaagagag---agtgtaattcaagcatctttaaaggaagaagggtgtaatttactcttat 32348584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 20570831 - 20570900
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaa 76  Q
    ||||| ||||||||||||||||||| ||| | ||||| |||||| ||| ||| |||| | ||||||||||    
T  20570831 ggagtgtatattttaacataagaggggaggagagtgtgattcaagcatctttgaggagaggagagtgtaa 20570900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 86
Target Start/End: Original strand, 36854337 - 36854409
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctta 86  Q
    ||||||||||||||||||| ||||  ||| |||||||| ||| ||| | |||||| |||| |||||||||||||    
T  36854337 tatattttaacataagagg-gagataagtttaattcaaccatctttcaagaaaagggagtataatttactctta 36854409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 38497393 - 38497356
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaa 50  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  38497393 tatattttaacataagaggggagaagagtgtaattcaa 38497356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 42598396 - 42598315
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||||| ||||||||||||||||||||| ||||    | |||||||| ||  ||| ||| || |||||||||||||||||||    
T  42598396 aggggaatatatattttaacataagaggggagaggtctataattcaagcagctttgagggaaggagagtgtaatttactctt 42598315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 42598988 - 42599069
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    |||| ||| ||||||||||||||||||  ||| | ||||||||||||||| |||| |||  | | || ||||||||||||||    
T  42598988 agggaagtgtatattttaacataagagtggaggagagtgtaattcaaacagttttgaggggaggggattgtaatttactctt 42599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 6031352 - 6031428
Alignment:
Q  7 ggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactc 83  Q
    ||||||||||||||||||||||| | ||  | |||||||||||||||| ||| |||  |   |||||||||||||||    
T  6031352 ggagtatatattttaacataagaagggatgaaagtgtaattcaaacatctttgaggggagaggagtgtaatttactc 6031428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 13686038 - 13685962
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||||||||||||||||||| ||  | ||||||||||||  || ||| |||| | | ||||||||||||||||    
T  13686038 gagtgtatattttaacataagaggggatgagagtgtaattcaaggatctttgaggagaggggagtgtaatttactct 13685962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 20259398 - 20259322
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttatta 89  Q
    ||||||||||||||||||  |||| || |||||||||| ||| |||||  |||  |||||| |||||||||| ||||    
T  20259398 tatattttaacataagagaggagagtattgtaattcaagcatctttaaaaaaataagagtgcaatttactctaatta 20259322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 21639088 - 21639012
Alignment:
Q  8 gagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||| ||||||||||||||||||| |||   |||||||||||| ||| ||| | |  | ||||||||||||||||||    
T  21639088 gagtgtatattttaacataagaggggagtggagtgtaattcaagcatctttgaagggatgagagtgtaatttactct 21639012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 22731060 - 22731140
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||| | |||   ||||||||||||| |||||| |||  | | |||| |||||||||||    
T  22731060 aggggagtgtatattttaacataagaagggaggggagtgtaattcaaatatttttgaggggaggggagtataatttactct 22731140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 3482 - 3399
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||||||||||| ||| |  ||||||||||| ||| ||| |||  | | |||||||||||||||||||    
T  3482 aggggagtgtatattttaacataagaggggaggagtgtgtaattcaagcatctttgaggggaggggagtgtaatttactcttat 3399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 11042 - 10964
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttact 82  Q
    |||||||| ||| ||||||||||||||| ||||| ||||||| |||| ||| ||| |||  |||||| |||||||||||    
T  11042 aggggagtgtatgttttaacataagaggggagaaaagtgtaaatcaagcatctttgaggggaagagactgtaatttact 10964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 11630 - 11710
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| |||| |||||||||||||| |||   ||||||||| || ||| ||| |||  | ||||||||||||||||||    
T  11630 aggggagtgtataatttaacataagaggggaggtgagtgtaattgaagcatctttgaggggaggagagtgtaatttactct 11710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 97
Target Start/End: Original strand, 12860 - 12953
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttattaatttgatt 97  Q
    |||||| | ||||||||||||||||||  ||  | |||||||||||||||| ||| |||  | | ||||||||||||||||||||  |||||||    
T  12860 aggggaatgtatattttaacataagagaggaagagagtgtaattcaaacatctttgaggggaggggagtgtaatttactcttattcttttgatt 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 25980 - 25900
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||| ||||| | |||||||||||| | | | | |||| | | ||||||||||||||||    
T  25980 aggggagtgtatattttaacataagatgagagtagagtgtaattcaagcttctcttaggagaggggagtgtaatttactct 25900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 421221 - 421141
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||||||||||| |||   |||||||||||||||| ||| |||  |   ||||||||||||||||    
T  421221 aggggagtgtatattttaacataagaggggaggggagtgtaattcaaacatctttgaggggagtggagtgtaatttactct 421141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 14123 - 14075
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaac 52  Q
    |||| ||| ||||||||||||||||||| ||||  ||||||||||||||    
T  14123 agggaagtgtatattttaacataagaggggagaggagtgtaattcaaac 14075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 31354 - 31437
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactcttat 87  Q
    |||||||| ||||||||||||||| ||| ||| | |||||||||||| ||| ||| | |  | | |||||||||||||||||||    
T  31354 aggggagtgtatattttaacataaaaggggaggaaagtgtaattcaagcatctttcaagggaggggagtgtaatttactcttat 31437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 27012 - 27083
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    ||||||||||||||||||| ||||  |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  27012 tatattttaacataagaggggagatgagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 27083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 11363 - 11317
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaa 50  Q
    |||||||| ||||||||||||||||||| ||| | ||||||||||||    
T  11363 aggggagtgtatattttaacataagaggggaggaaagtgtaattcaa 11317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 85
Target Start/End: Complemental strand, 10658 - 10586
Alignment:
Q  13 tatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactctt 85  Q
    ||||||||||||||||||| | |   |||||||||||||||| ||| |||  | |||||||||||| ||||||    
T  10658 tatattttaacataagaggggcggggagtgtaattcaaacatctttgaggggaggagagtgtaattcactctt 10586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 15329 - 15409
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| |||||||||||| |||||||||    |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  15329 aggggagtctatattttaacaaaagaggagacgggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 15409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 19647 - 19727
Alignment:
Q  4 aggggagtatatattttaacataagaggagagaatagtgtaattcaaacatttttaaggaaaagagagtgtaatttactct 84  Q
    |||||||| ||||||||||| ||||||| |||   |||||||||||| ||| ||| |||  | | ||||||||||||||||    
T  19647 aggggagtgtatattttaacttaagaggggaggggagtgtaattcaagcatctttgaggggaggggagtgtaatttactct 19727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University