View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4175_high_14 (Length: 346)
Name: NF4175_high_14
Description: NF4175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4175_high_14 |
 | |
|
| [»] scaffold0182 (2 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 21772282 - 21771971
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21772282 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagttaaaacatcatcgtcaaaatga |
21772183 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21772182 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttattttctatgtattttgctgcccacataagtttgtact |
21772083 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21772082 |
tctctgctaatatcagatttgtgttatgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
21771983 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21771982 |
ctttagcaccct |
21771971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 21726217 - 21725906
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
21726217 |
acatccatccacgaacaacatccacgacagcttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcgtcgtcaaaatga |
21726118 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21726117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtgtccggtgttttctatgtattttgctgcccacataagtttgtact |
21726018 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21726017 |
actctgctaatatcagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
21725918 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21725917 |
ctttagcaccct |
21725906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 17 - 312
Target Start/End: Complemental strand, 21714504 - 21714209
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||| | |||||||||| |
|
|
| T |
21714504 |
acatccatccacgaacaacatccacgatagcttttcttcaaggctaccaaagccttcaagagaccaactggttgaagctaaaacatcgttgtcaaaatga |
21714405 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21714404 |
cccttcagttcatcaatgttatctgcaatctttttgtgtagatcctctggaatgtgtctggtgttttctatgtattttgctgcccacataagtttgtact |
21714305 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctga |
312 |
Q |
| |
|
||||| || | ||||||| || | |||||| |||||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||||| |
|
|
| T |
21714304 |
tctctcctttcttcagatttggattgtcatgatggataggacctaatgacacaaacttgggtgagtaatgcttctcaaaatttgttctatttctga |
21714209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 21788550 - 21788253
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| ||||| | ||||||| |||||||| | ||| ||| ||||||||| ||| |||||||| |
|
|
| T |
21788550 |
acatccatccacgaacaacatccacgacagcttttcttcgaggcttccaaagccttcaagagacttgccagttaaagttaaaacatcgtcgccaaaatga |
21788451 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
21788450 |
cccttcagttcatcaatgttatctgcaatctttttgtgcagatcctctggaatgtgtccagtgttttcgatgtattttgctgcccacataagcttgtact |
21788351 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
||||| |||| | | ||||||||| | |||||| |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
21788350 |
tctctcctaacttcaaatttgtgttgtcatgatggataggacctaccgacaacaacttgggcgagtaatgcttctcaaagttttttctatttctgaga |
21788253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 21807993 - 21808289
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgac |
117 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||||||||||| ||||||| |||||||| | |||| ||| ||||||||| ||| ||||||||| |
|
|
| T |
21807993 |
catccatccacgaacaacatccatgacagcttttcttcaaggctaccaaagccttcaagagactggccggttaaagttaaaacatcgtcgccaaaatgac |
21808092 |
T |
|
| Q |
118 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtactt |
217 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| |||| | ||| |||||||||||||||| || | ||||||||| |||||||| |
|
|
| T |
21808093 |
ccttcagttcatcgatgttatcagcaatctttttgtgtagatcctctagaataaagccgctgttttctatgtatttcgcagaccacataagcttgtactt |
21808192 |
T |
|
| Q |
218 |
ctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
|||| |||| | |||||| | || |||||| |||||||||||||| || |||||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
21808193 |
ctctcctaacttcagatttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttgttctatttctgaga |
21808289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 21704964 - 21704653
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||| |||||| |||||||||| |||||| ||||||| ||||||| |||||| || |||| || ||||||||||||| |||| || |
|
|
| T |
21704964 |
acatccatccatgaacaatatccacgacagcttttcatcaaggcactcaaagccttgaagagagtttccggttagagttaaaacatcatcgctaaaacga |
21704865 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
21704864 |
cccttcagttcatcaatgttatctgcaatctttttgtgtagttcctctggaataagtccggtgttttctatgtattttgctgcccacataagcttgtact |
21704765 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
||||| |||| | ||| ||| || | |||||| ||||||||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||| | |
|
|
| T |
21704764 |
tctctcctaacttcagagttggattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagttttttctacttctgagata |
21704665 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|| | ||||||| |
|
|
| T |
21704664 |
ctcttgcaccct |
21704653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 21652390 - 21652079
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||| ||| ||||||||| ||| ||||||| |
|
|
| T |
21652390 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctatcaaagccttcaagagacttgccagttaaagttaaaacatcgtcgctaaaatga |
21652291 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||| ||||| | ||| ||||| ||||||||||||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
21652290 |
ccctttagttcgttaattttatcggcaatctttttgtgtcgatcctctagaataaagccgttgttttctatgtattttgctgcccacataagcttatact |
21652191 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
|||| || | | | |||||| || | |||||| |||||||||||||| ||| ||||||| | |||||| |||||||| || ||||||||||||||| | |
|
|
| T |
21652190 |
cctctcctggtttcatatttgtattgtcatgatggataggacctattgaaacaaacttgggggtgtaatgtttctcaaaattgtttctatttctgagata |
21652091 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|| | ||||||| |
|
|
| T |
21652090 |
ctgtggcaccct |
21652079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 21664421 - 21664122
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaa---catcatcgtcaaaat |
114 |
Q |
| |
|
||||||||||||||||| |||||||||| ||||||||||||||| | ||||||| |||||||| | |||| ||| ||||| ||||||||||||||| |
|
|
| T |
21664421 |
catccatccacgaacaatatccacgacagcttttcttcaaggcttccaaagccttcaagagacttgccggttaaagttaaaattacatcatcgtcaaaat |
21664322 |
T |
|
| Q |
115 |
gacccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgta |
214 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||||||||||||| |||| || || | ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
21664321 |
gacccttcagttcatcgatgttatcaaaaatctttttgtgtagatcccgtggattgagtcttgtattttcaatgtattttgctgcccacataagcttgta |
21664222 |
T |
|
| Q |
215 |
cttctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
|||| || |||| | |||| ||| || |||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
21664221 |
cttccctcctaacttcagatctgtattgccatgatggataggacctattgacaggaacttgggtgagtaatacttctcaaagttttttctgtttctgaga |
21664122 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 21628445 - 21628149
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgac |
117 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| | ||||||| |||||| || ||| || ||||||||| ||| |||| ||| |
|
|
| T |
21628445 |
catccatccacgaacaacatccacgacagcttttcttcaaggcatccaaagccttgaagagagtttcccgttaaatttaaaacatcgtcgctaaaacgac |
21628346 |
T |
|
| Q |
118 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtactt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| |||||||| ||| |||||||| |
|
|
| T |
21628345 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagttcctctggaataagtccaatgttttctatgtattttgatgcccacacaagcttgtactt |
21628246 |
T |
|
| Q |
218 |
ctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
|||| ||| | |||||||| | |||||| |||||||||||||||||| ||||||||||||||| |||| |||| | |||| ||||||||||| |
|
|
| T |
21628245 |
ctctcctatgttcagatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatcttttttatttctgaga |
21628149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 328
Target Start/End: Complemental strand, 21785727 - 21785416
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||||||| |||| || |||||||| | |||| ||| ||||||||||||| ||||||| |
|
|
| T |
21785727 |
acatccatccacaaacaacatccacgacagcttttcttcaaggctaccaaagtcttcaagagactggccggttaaagttaaaacatcatcgctaaaatga |
21785628 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||| ||||||||| |||||||||||||||||||| |||| || || | || || | ||||||||| ||||||||||| ||||||| |
|
|
| T |
21785627 |
cccttcagttcattaatgttatcggcaatctttttgtgtagatcgcgtggattgcggcctatattctcgaggtattttgcggcccacataagcttgtact |
21785528 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
||||| || | ||||||| || | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| | |
|
|
| T |
21785527 |
tctctcctgtcttcagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttttcctatttcttagata |
21785428 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|| | ||||||| |
|
|
| T |
21785427 |
ctcttgcaccct |
21785416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 290
Target Start/End: Complemental strand, 21764382 - 21764110
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgac |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| || ||| ||| ||||||||||||| |||| ||| |
|
|
| T |
21764382 |
catccatccacgaacaacatccacgacaacttttcttcaaggctatgaaagccttcaagagactttccagttaaagttaaaacatcatcgctaaaacgac |
21764283 |
T |
|
| Q |
118 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtactt |
217 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||||| ||||||||| | | || ||||||||||||||| |||||||||| |||| |||||||| |
|
|
| T |
21764282 |
ccttcagttcatcgatgttatcagcaatcttttggtgtagttcctctggattaagtgcggtgttttctatgtattctgctgcccacttaagcttgtactt |
21764183 |
T |
|
| Q |
218 |
ctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttc |
290 |
Q |
| |
|
|||| |||| | |||| || | | |||||| |||||||||||||||| ||||||||| ||| |||||| |
|
|
| T |
21764182 |
ctctcctaacttcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtgcttc |
21764110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 289
Target Start/End: Complemental strand, 21623514 - 21623242
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| || ||||| ||||||| |||||||| || |||| ||| ||||||||| || ||||||| |
|
|
| T |
21623514 |
acatccatccacgaacaacatccacgacagcttttctttaatgctaccaaagccttcaagagactttccggttaaagttaaaacatcgtcactaaaatga |
21623415 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||| |||||||||||||| ||||| | ||||| ||| | || | |||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
21623414 |
cccttcagttcatcaatattatcagcaatcttgttgtgcatatccttctgaacttttctggtgtttttgatgtattttgctgcccacataagcttgtact |
21623315 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgctt |
289 |
Q |
| |
|
||||| |||| | |||||||| || |||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21623314 |
tctctcctaacttcagatttgtattgccatgatggataggacctattgacaccaacttgggtgagtaatgctt |
21623242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 308
Target Start/End: Complemental strand, 21681971 - 21681680
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||||||||||||||| || |||||||||||||||||| || ||||| |||||||| | |||| ||| ||||||||| ||| |||||| |
|
|
| T |
21681971 |
acatccatccacgaacaacatccatgataacttttcttcaaggctatgatagccttcaagagactcgccggttaaagttaaaacatcgtcgctaaaatgg |
21681872 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||| |||||||| | ||||| ||| |||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
21681871 |
cccttcaattcatcaatgttatcagcaatttttttgtatagatccttttgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtact |
21681772 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctattt |
308 |
Q |
| |
|
||||| |||| | |||| ||| || |||||| |||||||||||||||||| ||||||| |||||||| || ||| ||| |||||||| |
|
|
| T |
21681771 |
tctctcctaactttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttgttctattt |
21681680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 328
Target Start/End: Complemental strand, 21647058 - 21646753
Alignment:
| Q |
23 |
atccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgacccttc |
122 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||| | ||| ||| |||||| || ||| ||||||||||||| |
|
|
| T |
21647058 |
atccacgaacaatatccacgacaacttttcttcaaggctacggaagcctttaagagacttgccggtcaaagttaaaacgtcgtcgctaaaatgacccttc |
21646959 |
T |
|
| Q |
123 |
agttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtacttctctg |
222 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||| ||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
21646958 |
agttcatcaatgttatctacaatctttttgtgtagatccttcttaattcttcccgtgtttttgatgtattttgctgcccacataagcttgtatttctctc |
21646859 |
T |
|
| Q |
223 |
ctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttag |
322 |
Q |
| |
|
||| | || |||| || | |||||| ||||||||||||||||| ||||||| | |||||||| |||||| ||| |||||||||||||| ||| | | |
|
|
| T |
21646858 |
ctatcttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttgttctatttctgagatactgtgg |
21646759 |
T |
|
| Q |
323 |
caccct |
328 |
Q |
| |
|
|||||| |
|
|
| T |
21646758 |
caccct |
21646753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 15713943 - 15713647
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgac |
117 |
Q |
| |
|
||||||||||||||||||||||| |||| ||||||||| ||||||| ||| ||| ||| ||| || |||| ||| ||||||||| || |||||||| |
|
|
| T |
15713943 |
catccatccacgaacaacatccatgacagcttttcttctaggctaccaaatccttgaagtgactttccggttaaagttaaaacatcgtcactaaaatgac |
15713844 |
T |
|
| Q |
118 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtactt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||| ||||| ||| |||||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
15713843 |
acttcagttcatcaatgttatcagcaatctttttgtgcagttcctctagaatgcttccagtgtttttgatgtattttgccgcccacataagcttgtactt |
15713744 |
T |
|
| Q |
218 |
ctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
||| || | | |||||||| || | |||||| ||||| |||||||| || |||| |||| ||||||| ||||| | ||||| || ||||||||| |
|
|
| T |
15713743 |
ctcccctgactttagatttgtattgtcatgatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttttactttttctgaga |
15713647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 21745853 - 21745556
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||||||||||||| ||||||| |||||| || ||| ||| ||||||||| ||| |||| || |
|
|
| T |
21745853 |
acatccatctacgaataacatccacgacagcttttcttcaaggcattcaaagccttgaagagaatttccagttaaagttaaaacatcgtcgctaaaacga |
21745754 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||| ||||| | |||| ||| || | || || | ||||||||||||||||||||| || |||| |
|
|
| T |
21745753 |
cccttcagttcatcaatgttatcaacaatctttttgtgcagatcgtgtggattgtggcctgtattctcgaggtattttgctgcccacataagcttatact |
21745654 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgaga |
314 |
Q |
| |
|
||| || | ||||||| || | |||||| |||||||||| |||||| ||||||||||||||||||||||||| ||| |||||||| ||||| |
|
|
| T |
21745653 |
cttctcctgtctttagatttggattgtcatgatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttgttctatttatgaga |
21745556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 314
Target Start/End: Complemental strand, 21992503 - 21992197
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||| ||||| | ||||||| |||||||| || | | ||| ||||||||| || ||||||| |
|
|
| T |
21992503 |
acatccatccacgaacaacatccatgacagcttttcttcgaggcttccaaagccttcaagagactttccagctaaagttaaaacatcgtcactaaaatga |
21992404 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||| |||| | ||| ||||| |||||||||||||||||| |||| ||||||| |
|
|
| T |
21992403 |
cccttcagttcatcaatgttatcgataatctttttgtgtagatcgcatggattaagtcctgcattttcgatgtattttgctgcccacgtaagcttgtact |
21992304 |
T |
|
| Q |
217 |
tctctgctaatataagatttg-------tgttctg--atgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatt |
307 |
Q |
| |
|
||||| |||| | ||||||| ||| || |||||| ||||||||||||||||| | ||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
21992303 |
tctctcctaacttcagatttgcattgcttgtattgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtcttttctatt |
21992204 |
T |
|
| Q |
308 |
tctgaga |
314 |
Q |
| |
|
| ||||| |
|
|
| T |
21992203 |
tttgaga |
21992197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 328
Target Start/End: Complemental strand, 21689733 - 21689423
Alignment:
| Q |
18 |
catccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatgac |
117 |
Q |
| |
|
||||||||||| |||||||||||||| | |||||||||||| ||| ||||||| | ||||| || ||| | | ||||||||| || |||||||||| |
|
|
| T |
21689733 |
catccatccaccaacaacatccacgatagcttttcttcaagactatcaaagccttcgagagaatttccggtcaatgttaaaacatcgtcatcaaaatgac |
21689634 |
T |
|
| Q |
118 |
ccttcagttcatcaatgttatcagcaatctttttgtgtagat-cctctggaatgtatccgttgttttctatgtattttgctgcccacataagtttgtact |
216 |
Q |
| |
|
||||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||| |||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
21689633 |
ccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtact |
21689535 |
T |
|
| Q |
217 |
tctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagaga |
316 |
Q |
| |
|
||||| |||| | ||| | | || |||||| ||||||||| |||||| || | || | |||||||||||||| |||| ||||||||||||| | |
|
|
| T |
21689534 |
tctctcctaactttagagatttattgccatgatggataggaccttttgacatcaacctcggggtctaatgcttctcaaatttttctctatttctgagata |
21689435 |
T |
|
| Q |
317 |
ctttagcaccct |
328 |
Q |
| |
|
|| | ||||||| |
|
|
| T |
21689434 |
ctcttgcaccct |
21689423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 226
Target Start/End: Complemental strand, 21792332 - 21792123
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||||||||| ||||| |||| ||||||||| ||||||| |||||| |||||||| | |||| ||| ||||||||||||| |||| || |
|
|
| T |
21792332 |
acatccatccacgaacaatatccatgacagcttttcttcgaggctaccaaagccgtcaagagacttgcgggttaaagttaaaacatcatcgctaaaacga |
21792233 |
T |
|
| Q |
117 |
cccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctggaatg-tatccgttgttttctatgtattttgctgcccacataagtttgtac |
215 |
Q |
| |
|
||||||| |||||||||||| |||||||||||||| ||||| | ||||| | || ||| |||| ||||||| ||||||||||||||| |||||| |
|
|
| T |
21792232 |
tccttcagcgtatcaatgttatcggcaatctttttgtgcagatctttcagaatgctttcagtt-tttttgatgtattctgctgcccacataagcttgtac |
21792134 |
T |
|
| Q |
216 |
ttctctgctaa |
226 |
Q |
| |
|
|||||| |||| |
|
|
| T |
21792133 |
ttctctcctaa |
21792123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 25694 - 25588
Alignment:
| Q |
17 |
acatccatccacgaacaacatccacgacaacttttcttcaaggctacgaaagcctgcaagagaccatctggttgaagctaaaacatcatcgtcaaaatga |
116 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||||||||||||| ||| ||||||| |||||||| | | ||| ||| ||||||||| ||| ||||||| |
|
|
| T |
25694 |
acatccatccacgaacaacatcaacgacagcttttcttcaagggtaccaaagccttcaagagactttttagttaaagttaaaacatcctcgctaaaatga |
25595 |
T |
|
| Q |
117 |
cccttca |
123 |
Q |
| |
|
||||||| |
|
|
| T |
25594 |
cccttca |
25588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 278
Target Start/End: Complemental strand, 25470 - 25370
Alignment:
| Q |
178 |
tgttttctatgtattttgctgcccacataagtttgtacttctctgctaatataagatttgtgttctgatgatgaataggacctattgacacacacttggg |
277 |
Q |
| |
|
||||||||||||||| |||||||||| |||| |||||||||||| |||| | |||||| | || | |||||| ||||||||||||||||| ||||||| |
|
|
| T |
25470 |
tgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatttttattgtcatgatggataggacctattgacaccaacttggg |
25371 |
T |
|
| Q |
278 |
t |
278 |
Q |
| |
|
| |
|
|
| T |
25370 |
t |
25370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 167
Target Start/End: Original strand, 18192138 - 18192210
Alignment:
| Q |
95 |
taaaacatcatcgtcaaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagatcctctgga |
167 |
Q |
| |
|
||||||||| ||| ||||| ||||||||||||||| ||||||||| ||||| | || || |||||||| |||| |
|
|
| T |
18192138 |
taaaacatcgtcggcaaaaagacccttcagttcattaatgttatctgcaatatcttggtatagatcctttgga |
18192210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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