View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4175_high_15 (Length: 332)
Name: NF4175_high_15
Description: NF4175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4175_high_15 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 4269231 - 4268931
Alignment:
| Q |
14 |
agattatgcaaagagagaaaaatgttccataacaatgtatgaaagtacggtgtagtaaagtaatatattacaataatgttccacaagtagaacatttggt |
113 |
Q |
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| T |
4269231 |
agattatgcaaagagagaaaaatgttccataacaatgtatgaaagtacggtgtagtaaagtaatatattacaataatgttccacaagtagaacatttggt |
4269132 |
T |
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| Q |
114 |
gaaattgaaaacaacccatatgattttaatcccaaagtggtaacaaaaaatcatcaggaaaagtagcatataattcaattccttcaaacccaattaacgg |
213 |
Q |
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| T |
4269131 |
gaaattgaaaacaacccatatgattttaatcccaaagtggtaacaaaaaatcatcagaaaaagtagcatagaattcaattccttcaaacccaattaacgg |
4269032 |
T |
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| Q |
214 |
agaaggatgatgataaacccaagtactatcaactgagtcatcttcatcttcttcattaattttaggaagttcaacaatttgactaagttcttcaacagat |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4269031 |
agaaggatgatgataaacccaagtactatcaactgagtcatcttcatcttcttcattaattttaggaagttcaacaatttgactaagttcttcaacagat |
4268932 |
T |
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| Q |
314 |
t |
314 |
Q |
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| T |
4268931 |
t |
4268931 |
T |
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