View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4177_high_7 (Length: 335)
Name: NF4177_high_7
Description: NF4177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4177_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 12 - 318
Target Start/End: Original strand, 7266368 - 7266674
Alignment:
| Q |
12 |
agaccagtatttagaacatgtattgctattgtgtttgaaatttacctgcacgaagcagtcgtggaagtgaagtcgaagaagagaagctgctattctgata |
111 |
Q |
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| T |
7266368 |
agaccagtatttagaacatgtattgctattgtgtttgaaatttacctgcacgaagcagtcgtggaagtgaagtcgaagaagagaagctgctattctgata |
7266467 |
T |
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| Q |
112 |
tccttagcaatggccttctccaagactgacatgacaatgtcattagcttgagggcatgaaaactgatagaattgaggagaaagtccaaaagacattcctc |
211 |
Q |
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| T |
7266468 |
tccttagcaatggccttctccaagactgacatgacaatgtcattagcttgagggcatgaaaactgatagaattgaggagaaagtccaaaagacattcctc |
7266567 |
T |
|
| Q |
212 |
tagtggttccaccatgatgaccaccccagccgaagtggaaatcatggacaggatgagcatgggagagtgtaactgagagaaaagctgctacaagaagaat |
311 |
Q |
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| T |
7266568 |
tagtggttccaccatgatgaccaccccagccaaagtggaaatcatggacaggatgagcatgggagagtgtaactgagagaaaagctgctacaagaagaat |
7266667 |
T |
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| Q |
312 |
gactttg |
318 |
Q |
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| T |
7266668 |
gactttg |
7266674 |
T |
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